Rh4DG088000

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
13400593 .. 13407811
7219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG088000.1

Sequence Viewer

Length: 1539 bp
ATGTCTCTGAGCAGTATGGCAATAAATTTTCATTCTCTTAGGCGCTCGAAAAATTTCTCTATTACCTTCTTCACTTTCATCAATTTTGTGCTTCCCTTTTCCCATCCACTTTCCTTCAGTATAAGCCGCTTTGAGCCAGGTGCAAAGAACATACATTATGATGGTGATGCTGCTCCTTCTTCATTCGGAGTGATTGAACTTAACCCAATCGATTCATTCCGTGTTGGCCGGGCTACATATGCAAAACCTCTGCACTTATGGGACAAGGGCTCACTGGCAGACTTCACCACTGCTACTGGAGCGGTGGATGAGCGGCACGTTATATATTCATGGGATTTCAGTTCTGATTTGGATTCAGAAGAGACTAGCAAGAATGAGTGGATGTCAATCTTGATCGAGGTGGTTGCAGCTTCTTTGTTCGGTTTGTTGCTTGGCTGGACCATATATTGGTTCGTCAGAAGGAAGAGGATAAGAAGACTAGCCTCGAAAGATGCAAAAGGAAATGGCAATTACTCCAATGCTGATGTACCCCGCTCTATAAATGCAGATCTTGAGAGAGCAACCTTACCAAAACAATTTGCTTACCAAGAATTACTTGCAGCCACCGATGGCTTTGCAGATGGTAGTATATTAGGCCAAGGAGGTTCTGGACGAGTTTATAAAGGAATCCTTCGGGACCTAGGATTCACAGTTGCTGTCAAGAGGATTATTGCAGAATCTGATCCGAACTATGAGAAAACATTCACCAATGAAGTTAAGATCATAAGCCGCTTAATCCATCGGAACCTGGTGCAATTTATTGGATGGTGTCACAAGGAAGGAGAATGCCTACTTGTTTATGCCTACATGCCTAACAGCAGCCTTGATAAGCATTTGTTTGGCTCCAGAACAACCCTACAGTGGCATTTGAGGCATAAGATCGCTTTAGATCTAGCCTCAGCTCTTCATTACCTGCATGAAGATGCAGAGCAGCCAGTACTTCATAGGGATATCAAATCAGCTAACGTGTTGCTGGACAAGGATTTCAGCTGTAAGCTTGGTGATTTTGGGATTTCTAAACTTGTGGATCCCCGGTCCAGGACTCAGACAACGAGGGTGGTAGGGACTTGGGGGTACATCGCCCCAGAATATGCAACTAAAGGGAGGGCCAGTAAAGAATCAGACATGTTTAGTTTTGGAGTTCTGGCCTTGGAACTTGCATGTGGAGATAGGGCTGAGCAGGATGAAAGATTTCAGGTCGCACTTGTCAGTCAGGTTTGGCAACAATACCTTTCTGGAAATCTTCTGGATGTAGCTGATAAGAGACTGGATATGATATTTGATCAAAGGCAAATGAAATGCTTGTTAAATGTGGGATTATGGTGCACCAACCCCAACAGCAAGGAGAGACCAAAAGCTGGTGATGTAATGAAGGTGCTTCAGCTTGAAGCACCACTGCCGGAACTTCCACGTGACATGCATGACCGTCCACTGCCTCAACGTCAAGATCAAGCTGGATCTTCTCACTTATCCTTAACTTCTAGCTTAGAATGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

512

Amino Acids

57.74

Weight (kDa)

7.67

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 37 - 97 3.7e-11 Legume lectin domain
Pkinase PF00069 207 - 470 1.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 210 - 470 1.2e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 660
Acc36I ACCTGC 1 cut(s) 960
AccB7I CCANNNNNTGG 2 cut(s) 447, 1397
AccBSI CCGCTC 3 cut(s) 302, 313, 534
AciI CCGC 5 cut(s) 127, 302, 313, 532, 769
AclWI GGATC 4 cut(s) 716, 1061, 1074, 1504
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 2 cut(s) 25, 52
AcuI CTGAAG 2 cut(s) 100, 1403
AcvI CACGTG 1 cut(s) 1451
AfaI GTAC 3 cut(s) 528, 978, 1115
AfiI CCNNNNNNNGG 4 cut(s) 447, 900, 1077, 1397
AflIII ACRYGT 2 cut(s) 1005, 1164
AgsI TTSAA 2 cut(s) 197, 1427
AjnI CCWGG 3 cut(s) 136, 786, 1076
Alw21I GWGCWC 1 cut(s) 1367
Alw26I GTCTC 4 cut(s) 9, 356, 1297, 1381
Alw44I GTGCAC 1 cut(s) 1363
AlwI GGATC 4 cut(s) 716, 1061, 1074, 1504
AlwNI CAGNNNCTG 2 cut(s) 695, 719
AoxI GGCC 4 cut(s) 226, 634, 1146, 1185
ApaLI GTGCAC 1 cut(s) 1363
ApeKI GCWGC 5 cut(s) 170, 407, 599, 858, 970
ApoI RAATTY 2 cut(s) 25, 52
Asp700I GAANNNNTTC 3 cut(s) 53, 740, 1230
AspA2I CCTAGG 1 cut(s) 679
AspLEI GCGC 1 cut(s) 45
AspS9I GGNCC 4 cut(s) 438, 676, 1074, 1146
AsuC2I CCSGG 2 cut(s) 230, 1072
AsuHPI GGTGA 5 cut(s) 176, 277, 736, 1052, 1412
AvaII GGWCC 3 cut(s) 438, 676, 1074
AvrII CCTAGG 1 cut(s) 679
BaeGI GKGCMC 1 cut(s) 1367
BamHI GGATCC 1 cut(s) 1066
BanII GRGCYC 1 cut(s) 272
BbrPI CACGTG 1 cut(s) 1451
BbsI GAAGAC 1 cut(s) 481
Bbv12I GWGCWC 1 cut(s) 1367
BbvCI CCTCAGC 1 cut(s) 937
BbvI GCAGC 5 cut(s) 157, 419, 611, 870, 982
BccI CCATC 6 cut(s) 111, 155, 602, 614, 786, 798
BcgI CGANNNNNNTGC 4 cut(s) 386, 420, 596, 630
BciT130I CCWGG 3 cut(s) 138, 788, 1078
BclI TGATCA 1 cut(s) 1321
BcnI CCSGG 2 cut(s) 230, 1072
BcoDI GTCTC 4 cut(s) 9, 356, 1297, 1381
BfaI CTAG 5 cut(s) 366, 479, 680, 932, 1521
BfmI CTRYAG 1 cut(s) 896
BfoI RGCGCY 1 cut(s) 46
BfuAI ACCTGC 1 cut(s) 960
BglII AGATCT 2 cut(s) 547, 928
BisI GCNGC 8 cut(s) 127, 171, 314, 408, 600, 769, 859, 971
BlnI CCTAGG 1 cut(s) 679
BlpI GCTNAGC 1 cut(s) 1215
BlsI GCNGC 8 cut(s) 128, 172, 315, 409, 601, 770, 860, 972
BmcAI AGTACT 1 cut(s) 978
Bme1390I CCNGG 5 cut(s) 138, 230, 788, 1072, 1078
Bme18I GGWCC 3 cut(s) 438, 676, 1074
BmgT120I GGNCC 4 cut(s) 438, 676, 1074, 1146
BmiI GGNNCC 4 cut(s) 677, 785, 883, 1068
BmrFI CCNGG 5 cut(s) 138, 230, 788, 1072, 1078
BmsI GCATC 3 cut(s) 157, 481, 952
BpiI GAAGAC 1 cut(s) 481
BpmI CTGGAG 2 cut(s) 318, 868
Bpu10I CCTNAGC 1 cut(s) 937
Bpu1102I GCTNAGC 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 572
BpuMI CCSGG 2 cut(s) 230, 1072
Bsa29I ATCGAT 1 cut(s) 210
BsaAI YACGTR 1 cut(s) 1451
BsaBI GATNNNNATC 1 cut(s) 386
BsaI GGTCTC 1 cut(s) 1381
BsaJI CCNNGG 4 cut(s) 637, 679, 1070, 1188
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 4 cut(s) 447, 900, 1077, 1397
Bse1I ACTGG 5 cut(s) 279, 301, 974, 1149, 1311
Bse8I GATNNNNATC 1 cut(s) 386
BseBI CCWGG 3 cut(s) 138, 788, 1078
BseCI ATCGAT 1 cut(s) 210
BseDI CCNNGG 4 cut(s) 637, 679, 1070, 1188
BseGI GGATG 6 cut(s) 103, 313, 387, 809, 1228, 1294
BseJI GATNNNNATC 1 cut(s) 386
BseLI CCNNNNNNNGG 4 cut(s) 447, 900, 1077, 1397
BseMII CTCAG 3 cut(s) 951, 1097, 1206
BseNI ACTGG 5 cut(s) 279, 301, 974, 1149, 1311
BseSI GKGCMC 1 cut(s) 1367
BseXI GCAGC 5 cut(s) 157, 419, 611, 870, 982
BsgI GTGCAG 1 cut(s) 236
BshFI GGCC 4 cut(s) 228, 636, 1148, 1187
BshVI ATCGAT 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 1367
BsiSI CCGG 3 cut(s) 229, 1072, 1439
BslFI GGGAC 3 cut(s) 275, 689, 1117
BslI CCNNNNNNNGG 4 cut(s) 447, 900, 1077, 1397
BsmAI GTCTC 4 cut(s) 9, 356, 1297, 1381
BsmFI GGGAC 3 cut(s) 275, 689, 1117
BsmI GAATGC 1 cut(s) 830
BsnI GGCC 4 cut(s) 228, 636, 1148, 1187
Bso31I GGTCTC 1 cut(s) 1381
Bsp1286I GDGCHC 2 cut(s) 272, 1367
Bsp1720I GCTNAGC 1 cut(s) 1215
BspACI CCGC 5 cut(s) 127, 302, 313, 532, 769
BspANI GGCC 4 cut(s) 228, 636, 1148, 1187
BspCNI CTCAG 3 cut(s) 950, 1096, 1207
BspDI ATCGAT 1 cut(s) 210
BspLI GGNNCC 4 cut(s) 677, 785, 883, 1068
BspMI ACCTGC 1 cut(s) 960
BspPI GGATC 4 cut(s) 716, 1061, 1074, 1504
BspQI GCTCTTC 1 cut(s) 948
BspTNI GGTCTC 1 cut(s) 1381
BsrBI CCGCTC 3 cut(s) 302, 313, 534
BsrI ACTGG 5 cut(s) 279, 301, 974, 1149, 1311
BssECI CCNNGG 4 cut(s) 637, 679, 1070, 1188
BssT1I CCWWGG 3 cut(s) 637, 679, 1188
Bst2UI CCWGG 3 cut(s) 138, 788, 1078
Bst4CI ACNGT 3 cut(s) 691, 900, 1466
Bst6I CTCTTC 3 cut(s) 354, 458, 948
BstBAI YACGTR 1 cut(s) 1451
BstDEI CTNAG 6 cut(s) 8, 38, 937, 1083, 1215, 1525
BstF5I GGATG 6 cut(s) 103, 313, 387, 809, 1228, 1294
BstH2I RGCGCY 1 cut(s) 46
BstHHI GCGC 1 cut(s) 45
BstMAI GTCTC 4 cut(s) 9, 356, 1297, 1381
BstMWI GCNNNNNNNGC 3 cut(s) 239, 299, 910
BstNI CCWGG 3 cut(s) 138, 788, 1078
BstNSI RCATGY 4 cut(s) 850, 1168, 1203, 1459
BstSCI CCNGG 5 cut(s) 136, 228, 786, 1070, 1076
BstSFI CTRYAG 1 cut(s) 896
BstSLI GKGCMC 1 cut(s) 1367
BstV1I GCAGC 5 cut(s) 157, 419, 611, 870, 982
BstV2I GAAGAC 1 cut(s) 481
BstX2I RGATCY 4 cut(s) 547, 928, 1066, 1496
BstYI RGATCY 4 cut(s) 547, 928, 1066, 1496
Bsu15I ATCGAT 1 cut(s) 210
BsuRI GGCC 4 cut(s) 228, 636, 1148, 1187
BsuTUI ATCGAT 1 cut(s) 210
BtgZI GCGATG 1 cut(s) 1102
BtsCI GGATG 6 cut(s) 103, 313, 387, 809, 1228, 1294
BtsI GCAGTG 3 cut(s) 288, 1433, 1469
BtsIMutI CAGTG 5 cut(s) 272, 288, 905, 1433, 1469
BveI ACCTGC 1 cut(s) 960
CaiI CAGNNNCTG 2 cut(s) 695, 719
CfoI GCGC 1 cut(s) 45
Cfr13I GGNCC 4 cut(s) 438, 676, 1074, 1146
ClaI ATCGAT 1 cut(s) 210
CsiI ACCWGGT 1 cut(s) 786
Csp6I GTAC 3 cut(s) 527, 977, 1114
CspCI CAANNNNNGTGG 2 cut(s) 1077, 1112
CviAII CATG 7 cut(s) 330, 847, 956, 1165, 1200, 1456, 1460
CviQI GTAC 3 cut(s) 527, 977, 1114
DdeI CTNAG 6 cut(s) 8, 38, 937, 1083, 1215, 1525
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 3 cut(s) 354, 458, 948
EarI CTCTTC 3 cut(s) 354, 458, 948
Eco130I CCWWGG 3 cut(s) 637, 679, 1188
Eco24I GRGCYC 1 cut(s) 272
Eco31I GGTCTC 1 cut(s) 1381
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 3 cut(s) 438, 676, 1074
Eco57I CTGAAG 2 cut(s) 100, 1403
Eco72I CACGTG 1 cut(s) 1451
EcoO109I RGGNCCY 1 cut(s) 676
EcoRII CCWGG 3 cut(s) 136, 786, 1076
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 3 cut(s) 637, 679, 1188
EcoT22I ATGCAT 1 cut(s) 1461
EcoT38I GRGCYC 1 cut(s) 272
ErhI CCWWGG 3 cut(s) 637, 679, 1188
FaeI CATG 7 cut(s) 333, 850, 959, 1168, 1203, 1459, 1463
FalI AAGNNNNNCTT 4 cut(s) 579, 611, 654, 686
FaqI GGGAC 3 cut(s) 275, 689, 1117
FatI CATG 7 cut(s) 329, 846, 955, 1164, 1199, 1455, 1459
FauI CCCGC 1 cut(s) 539
FauNDI CATATG 1 cut(s) 238
FbaI TGATCA 1 cut(s) 1321
Fnu4HI GCNGC 8 cut(s) 127, 171, 314, 408, 600, 769, 859, 971
FokI GGATG 6 cut(s) 90, 320, 394, 816, 1235, 1301
FriOI GRGCYC 1 cut(s) 272
Fsp4HI GCNGC 8 cut(s) 127, 171, 314, 408, 600, 769, 859, 971
FspBI CTAG 5 cut(s) 366, 479, 680, 932, 1521
GlaI GCGC 1 cut(s) 44
GluI GCNGC 8 cut(s) 127, 171, 314, 408, 600, 769, 859, 971
GsuI CTGGAG 2 cut(s) 318, 868
HaeII RGCGCY 1 cut(s) 46
HaeIII GGCC 4 cut(s) 228, 636, 1148, 1187
HapII CCGG 3 cut(s) 229, 1072, 1439
HhaI GCGC 1 cut(s) 45
Hin1II CATG 7 cut(s) 333, 850, 959, 1168, 1203, 1459, 1463
Hin6I GCGC 1 cut(s) 43
HinP1I GCGC 1 cut(s) 43
HindIII AAGCTT 1 cut(s) 1034
HinfI GANTC 7 cut(s) 212, 353, 666, 684, 716, 1081, 1157
HpaII CCGG 3 cut(s) 229, 1072, 1439
HphI GGTGA 5 cut(s) 176, 277, 736, 1052, 1412
Hpy166II GTNNAC 2 cut(s) 1365, 1469
Hpy188III TCNNGA 9 cut(s) 391, 551, 648, 674, 700, 885, 1275, 1286, 1484
Hpy8I GTNNAC 2 cut(s) 1365, 1469
HpyAV CCTTC 7 cut(s) 76, 124, 186, 453, 680, 812, 1405
HpyCH4III ACNGT 3 cut(s) 691, 900, 1466
HpyCH4IV ACGT 4 cut(s) 318, 1005, 1450, 1480
HpyF10VI GCNNNNNNNGC 3 cut(s) 239, 299, 910
HpyF3I CTNAG 6 cut(s) 8, 38, 937, 1083, 1215, 1525
HpySE526I ACGT 4 cut(s) 318, 1005, 1450, 1480
Hsp92II CATG 7 cut(s) 333, 850, 959, 1168, 1203, 1459, 1463
HspAI GCGC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 1321
LguI GCTCTTC 1 cut(s) 948
LmnI GCTCC 3 cut(s) 178, 299, 887
Lsp1109I GCAGC 5 cut(s) 157, 419, 611, 870, 982
LweI GCATC 3 cut(s) 157, 481, 952
MabI ACCWGGT 1 cut(s) 786
MaeI CTAG 5 cut(s) 366, 479, 680, 932, 1521
MaeII ACGT 4 cut(s) 318, 1005, 1450, 1480
MaeIII GTNAC 2 cut(s) 809, 1451
MbiI CCGCTC 3 cut(s) 302, 313, 534
MboII GAAGA 9 cut(s) 61, 171, 371, 475, 486, 935, 971, 1274, 1491
MflI RGATCY 4 cut(s) 547, 928, 1066, 1496
MhlI GDGCHC 2 cut(s) 272, 1367
MluCI AATT 7 cut(s) 25, 52, 82, 508, 575, 590, 794
MlyI GAGTC 1 cut(s) 1075
Mph1103I ATGCAT 1 cut(s) 1461
MroXI GAANNNNTTC 3 cut(s) 53, 740, 1230
MseI TTAA 6 cut(s) 201, 756, 773, 1346, 1514, 1537
MslI CAYNNNNRTG 2 cut(s) 159, 960
MspA1I CMGCKG 1 cut(s) 1029
MspI CCGG 3 cut(s) 229, 1072, 1439
MspR9I CCNGG 5 cut(s) 138, 230, 788, 1072, 1078
Mva1269I GAATGC 1 cut(s) 830
MvaI CCWGG 3 cut(s) 138, 788, 1078
MwoI GCNNNNNNNGC 3 cut(s) 239, 299, 910
NciI CCSGG 2 cut(s) 230, 1072
NdeI CATATG 1 cut(s) 238
NlaIII CATG 7 cut(s) 333, 850, 959, 1168, 1203, 1459, 1463
NlaIV GGNNCC 4 cut(s) 677, 785, 883, 1068
NmuCI GTSAC 2 cut(s) 809, 1451
NsiI ATGCAT 1 cut(s) 1461
NspI RCATGY 4 cut(s) 850, 1168, 1203, 1459
PciI ACATGT 1 cut(s) 1164
PciSI GCTCTTC 1 cut(s) 948
PctI GAATGC 1 cut(s) 830
PdmI GAANNNNTTC 3 cut(s) 53, 740, 1230
PfeI GAWTC 6 cut(s) 212, 353, 666, 684, 716, 1157
PflMI CCANNNNNTGG 2 cut(s) 447, 1397
PfoI TCCNGGA 1 cut(s) 1076
PkrI GCNGC 8 cut(s) 128, 172, 315, 409, 601, 770, 860, 972
PleI GAGTC 1 cut(s) 1075
PmaCI CACGTG 1 cut(s) 1451
PmlI CACGTG 1 cut(s) 1451
PpsI GAGTC 1 cut(s) 1075
Ppu21I YACGTR 1 cut(s) 1451
PpuMI RGGWCCY 1 cut(s) 676
PscI ACATGT 1 cut(s) 1164
PsiI TTATAA 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 676
Psp6I CCWGG 3 cut(s) 136, 786, 1076
PspCI CACGTG 1 cut(s) 1451
PspGI CCWGG 3 cut(s) 136, 786, 1076
PspN4I GGNNCC 4 cut(s) 677, 785, 883, 1068
PspPI GGNCC 4 cut(s) 438, 676, 1074, 1146
PspPPI RGGWCCY 1 cut(s) 676
PstNI CAGNNNCTG 2 cut(s) 695, 719
PsuI RGATCY 4 cut(s) 547, 928, 1066, 1496
PvuII CAGCTG 1 cut(s) 1029
RsaI GTAC 3 cut(s) 528, 978, 1115
RsaNI GTAC 3 cut(s) 527, 977, 1114
RseI CAYNNNNRTG 2 cut(s) 159, 960
SapI GCTCTTC 1 cut(s) 948
SaqAI TTAA 6 cut(s) 201, 756, 773, 1346, 1514, 1537
SatI GCNGC 8 cut(s) 127, 171, 314, 408, 600, 769, 859, 971
Sau96I GGNCC 4 cut(s) 438, 676, 1074, 1146
ScaI AGTACT 1 cut(s) 978
SchI GAGTC 1 cut(s) 1075
ScrFI CCNGG 5 cut(s) 138, 230, 788, 1072, 1078
SduI GDGCHC 2 cut(s) 272, 1367
SexAI ACCWGGT 1 cut(s) 786
SfaNI GCATC 3 cut(s) 157, 481, 952
SfcI CTRYAG 1 cut(s) 896
SinI GGWCC 3 cut(s) 438, 676, 1074
SmiMI CAYNNNNRTG 2 cut(s) 159, 960
SmlI CTYRAG 1 cut(s) 551
SmoI CTYRAG 1 cut(s) 551
Sse9I AATT 7 cut(s) 25, 52, 82, 508, 575, 590, 794
SsiI CCGC 5 cut(s) 127, 302, 313, 532, 769
SspMI CTAG 5 cut(s) 366, 479, 680, 932, 1521
StyD4I CCNGG 5 cut(s) 136, 228, 786, 1070, 1076
StyI CCWWGG 3 cut(s) 637, 679, 1188
TaaI ACNGT 3 cut(s) 691, 900, 1466
TaiI ACGT 4 cut(s) 321, 1008, 1453, 1483
TaqI TCGA 4 cut(s) 47, 210, 396, 485
TasI AATT 7 cut(s) 25, 52, 82, 508, 575, 590, 794
TatI WGTACW 1 cut(s) 976
TauI GCSGC 3 cut(s) 129, 316, 771
TfiI GAWTC 6 cut(s) 212, 353, 666, 684, 716, 1157
Tru1I TTAA 6 cut(s) 201, 756, 773, 1346, 1514, 1537
Tru9I TTAA 6 cut(s) 201, 756, 773, 1346, 1514, 1537
TscAI CASTG 5 cut(s) 279, 295, 905, 1440, 1476
TseFI GTSAC 2 cut(s) 809, 1451
TseI GCWGC 5 cut(s) 170, 407, 599, 858, 970
Tsp45I GTSAC 2 cut(s) 809, 1451
TspGWI ACGGA 1 cut(s) 209
TspRI CASTG 5 cut(s) 279, 295, 905, 1440, 1476
Van91I CCANNNNNTGG 2 cut(s) 447, 1397
VneI GTGCAC 1 cut(s) 1363
VpaK11BI GGWCC 3 cut(s) 438, 676, 1074
XapI RAATTY 2 cut(s) 25, 52
XceI RCATGY 4 cut(s) 850, 1168, 1203, 1459
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XmaJI CCTAGG 1 cut(s) 679
XmnI GAANNNNTTC 3 cut(s) 53, 740, 1230
XspI CTAG 5 cut(s) 366, 479, 680, 932, 1521
ZrmI AGTACT 1 cut(s) 978
Zsp2I ATGCAT 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.