Rw5G023480

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
33082859 .. 33084964
2106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G023480.1

Sequence Viewer

Length: 2106 bp
ATGGTTGTCAATCACTCCGGTGACATGACATCAATCCGGTCAGGAAAACTTCGATTCCTTCTTGCACCAAGACTGTATCTCTTGATCTTTCTCTTCTGTCCTTCTGCAACTCCATTAAGCTTTAATTTCCCGAGCTTTAAGCAAGAAGATATTGTCAATATAACTCGAGAAGGAAGCGCTTATATTGACAACGAATTTCTCTACCTCACCAGAAGCGCACAAGACCAGCGACCGGGTGGAATTGGTCGAGCCAGGTACTACCAGCCCTTCCTGATCCGACAAAATACCACCGGAAAACTCGCCGATTTCACCACAAATTTTACATTCTCCATTTATGCGCCAAATGATGCCAATTTAACATGGGGTGCCGGTGATGGACTAGCCTTCTTCTTAGCGCCAAACGGGTCCCAACTCAACAGCTCAGTAGGCCATGCTCTCGGCCTCCCCTTCTATCGTCAGTACCCATTTGTGGCGGTGGAATTTGATATCTACAAGAACTACGAAGTCATCCCCAACACAAATGAAACCGTCGACGACCCATCCGAACCCGGAGATCATGTGGGTATCGACGTCAACACTGTCAAGTCGTTGACTACCAGGCCTTGGAATGGTAGTATTATCGATGGACAAAACAATGATGTCCGGATCAGTTACAATTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACTTTTTTGATGAATGGTACCAAAAAGATGAGCTATTTTTCTTACACAGTTGATCTGAAGAATGTCTTACCGGATTGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTGAAGCTTCTGCTATATTTAGGATCGTTTCGTGGAATTTTACTTCAACTCCTCTGGTTGATGATGAGAATGCCAGGGACAACACTCCGGTAAGTGCACCTTCTGCTCCTGCGCCTAGCCCTAAGGCTAGTTCTGATCCCAACTCCGGCAATAAAGGACTAGTTCTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTGCTTTATCTTTTGGAAGAAGAAAGAAACGACGGACAGTGATGAAGATCCTATCGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACTGGTCCCAGAAAGTTTTTGTACAGCGATTTAGTCCAGGCAACCGGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAGGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTGGAACTCATATGTAGCTGTCAAGAGGATATCCAAAGAATCTAAACAAGGAGTGAAGGAGTACGCAACAGAAGTAAGGATCATAAGTCGACTTAGGCATCGGAATCTGGTGCAACTTTTTGGTTGGTGCCACAAGAAAAAAGAACTCCTGCTTGTTTACGAGTTCATGCCCAACGGCAGTTTAGATTCACATTTGTTCAAACAAAGAAGTTTGTTAACTTGGGAGGCCAGGTACAAAATAGCTAAAGGCTTGGCATCGGGGTTGCTTTATCTACACGAAGAATGGGAACAATGCGTTTTGCACAGAGACATCAAATCTAGCAATATCATGTTAGATTCCAATTTCAACGCAAAACTTGGGGATTTTGGGTTAGCTCGGCTTGTGGATCATGGCAAACAATCACGAACAACGGTTTTGGCTGGAACAATGGGCTACATGGCTCCTGAATGTGTTTCTACTGGAAAAGCTAGTAAGGAAACAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAGATAGCATGTGGGAGAAAACCGATAGATGTCAATATGGAAAGAGATCAAATCAATATTGTAGAATGGGTTTGGAAGCTATATGGAGAAGGGAGAGTCATTGAAACAGCCGATCCAAAACTCTGCGGTGATTTTGATGAGAAACAAGTAGAGTGTTTAATCATTGTTGGGTTGTGGTGTGCTCACCCAGACTACGTGATGAGGCCTTCGATACAACAAGCGATTCAAGTACTTAACTTCGAAGTTCCGTTGCCAATTCTTCCATCGAAATTTCCTGTGGCGACCTATTTTGCTCCTGCAGTATCGTTCTCCGAGTTTTCCGACAACAATACTGGTTCAAGTAGAGGTCAAAGCGAGCCTTCTACCAATGGTTAA

Protein Analysis

701

Amino Acids

77.76

Weight (kDa)

5.65

Isoelectric Point (pI)

33.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 289 1e-56 Legume lectin domain
Lectin_L-type_dom PF18483 102 - 270 1.1e-12 Legume lectin beta-barrel domain
Pkinase PF00069 386 - 653 9.8e-54 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 388 - 593 4.2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1203
AatII GACGTC 1 cut(s) 573
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 3 cut(s) 365, 707, 1347
AccB7I CCANNNNNTGG 1 cut(s) 603
AccI GTMKAC 2 cut(s) 531, 1309
AccIII TCCGGA 1 cut(s) 642
AciI CCGC 2 cut(s) 473, 1857
AclWI GGATC 8 cut(s) 268, 653, 827, 926, 1055, 1307, 1614, 1838
AcoI YGGCCR 1 cut(s) 1177
AcsI RAATTY 6 cut(s) 194, 316, 479, 832, 1091, 2000
AcuI CTGAAG 1 cut(s) 767
AcyI GRCGYC 1 cut(s) 570
AfaI GTAC 7 cut(s) 257, 461, 709, 1127, 1283, 1454, 1962
AfeI AGCGCT 1 cut(s) 178
AfiI CCNNNNNNNGG 6 cut(s) 232, 469, 603, 608, 941, 1070
AgeI ACCGGT 1 cut(s) 1148
AgsI TTSAA 9 cut(s) 792, 843, 1097, 1160, 1420, 1567, 1835, 1958, 2070
AhlI ACTAGT 1 cut(s) 955
AjnI CCWGG 6 cut(s) 251, 596, 869, 1140, 1179, 1448
AjuI GAANNNNNNNTTGG 2 cut(s) 1158, 1190
AleI CACNNNNGTG 1 cut(s) 18
Alw21I GWGCWC 2 cut(s) 895, 1915
Alw26I GTCTC 1 cut(s) 1521
Alw44I GTGCAC 1 cut(s) 891
AlwI GGATC 8 cut(s) 268, 653, 827, 926, 1055, 1307, 1614, 1838
Ama87I CYCGRG 2 cut(s) 130, 165
Aor13HI TCCGGA 1 cut(s) 642
Aor51HI AGCGCT 1 cut(s) 178
AoxI GGCC 6 cut(s) 427, 439, 599, 1177, 1446, 1934
ApaLI GTGCAC 1 cut(s) 891
ApoI RAATTY 6 cut(s) 194, 316, 479, 832, 1091, 2000
ArsI GACNNNNNNTTYG 2 cut(s) 1076, 1108
AsiGI ACCGGT 1 cut(s) 1148
Asp718I GGTACC 1 cut(s) 707
AspLEI GCGC 5 cut(s) 179, 218, 340, 397, 910
AspS9I GGNCC 2 cut(s) 405, 1109
AsuC2I CCSGG 2 cut(s) 234, 549
AsuHPI GGTGA 8 cut(s) 32, 199, 301, 383, 809, 1085, 1871, 1907
AsuII TTCGAA 1 cut(s) 1971
AvaI CYCGRG 2 cut(s) 130, 165
AvaII GGWCC 2 cut(s) 405, 1109
AxyI CCTNAGG 1 cut(s) 918
BaeGI GKGCMC 1 cut(s) 895
BalI TGGCCA 1 cut(s) 1179
BanI GGYRCC 3 cut(s) 365, 707, 1347
Bbv12I GWGCWC 2 cut(s) 895, 1915
BccI CCATC 4 cut(s) 368, 547, 617, 2002
BceAI ACGGC 1 cut(s) 1411
BciT130I CCWGG 6 cut(s) 253, 598, 871, 1142, 1181, 1450
BcnI CCSGG 2 cut(s) 234, 549
BcoDI GTCTC 1 cut(s) 1521
BcuI ACTAGT 1 cut(s) 955
BfaI CTAG 8 cut(s) 380, 660, 912, 924, 956, 992, 1539, 1689
BfmI CTRYAG 2 cut(s) 1708, 2028
BfoI RGCGCY 2 cut(s) 180, 398
BmcAI AGTACT 1 cut(s) 1962
Bme1390I CCNGG 8 cut(s) 234, 253, 549, 598, 871, 1142, 1181, 1450
Bme18I GGWCC 2 cut(s) 405, 1109
BmeT110I CYCGRG 2 cut(s) 130, 165
BmgT120I GGNCC 2 cut(s) 405, 1109
BmiI GGNNCC 7 cut(s) 367, 406, 407, 709, 1111, 1349, 1662
BmrFI CCNGG 8 cut(s) 234, 253, 549, 598, 871, 1142, 1181, 1450
BmsI GCATC 4 cut(s) 337, 1066, 1327, 1484
Bpu14I TTCGAA 1 cut(s) 1971
BpuMI CCSGG 2 cut(s) 234, 549
Bsa29I ATCGAT 1 cut(s) 621
BsaAI YACGTR 1 cut(s) 1927
BsaBI GATNNNNATC 1 cut(s) 1059
BsaHI GRCGYC 1 cut(s) 570
BsaJI CCNNGG 3 cut(s) 602, 870, 1180
BsaWI WCCGGW 7 cut(s) 17, 36, 290, 642, 760, 883, 1148
BsaXI ACNNNNNCTCC 6 cut(s) 543, 573, 829, 859, 1436, 1466
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 469, 603, 608, 941, 1070
Bse118I RCCGGY 2 cut(s) 368, 1148
Bse1I ACTGG 4 cut(s) 1111, 1226, 1684, 2068
Bse21I CCTNAGG 1 cut(s) 918
Bse8I GATNNNNATC 1 cut(s) 1059
BseAI TCCGGA 1 cut(s) 642
BseBI CCWGG 6 cut(s) 253, 598, 871, 1142, 1181, 1450
BseCI ATCGAT 1 cut(s) 621
BseDI CCNNGG 3 cut(s) 602, 870, 1180
BseGI GGATG 2 cut(s) 507, 539
BseJI GATNNNNATC 1 cut(s) 1059
BseLI CCNNNNNNNGG 6 cut(s) 232, 469, 603, 608, 941, 1070
BseMII CTCAG 1 cut(s) 435
BseNI ACTGG 4 cut(s) 1111, 1226, 1684, 2068
BseRI GAGGAG 1 cut(s) 837
BseSI GKGCMC 1 cut(s) 895
Bsh1285I CGRYCG 1 cut(s) 233
BshFI GGCC 6 cut(s) 429, 441, 601, 1179, 1448, 1936
BshNI GGYRCC 3 cut(s) 365, 707, 1347
BshTI ACCGGT 1 cut(s) 1148
BshVI ATCGAT 1 cut(s) 621
BsiEI CGRYCG 1 cut(s) 233
BsiHKAI GWGCWC 2 cut(s) 895, 1915
BsiHKCI CYCGRG 2 cut(s) 130, 165
BslFI GGGAC 4 cut(s) 391, 887, 1095, 1117
BslI CCNNNNNNNGG 6 cut(s) 232, 469, 603, 608, 941, 1070
BsmAI GTCTC 1 cut(s) 1521
BsmFI GGGAC 4 cut(s) 391, 887, 1095, 1117
BsmI GAATGC 1 cut(s) 871
BsnI GGCC 6 cut(s) 429, 441, 601, 1179, 1448, 1936
BsoBI CYCGRG 2 cut(s) 130, 165
Bsp119I TTCGAA 1 cut(s) 1971
Bsp1286I GDGCHC 2 cut(s) 895, 1915
Bsp13I TCCGGA 1 cut(s) 642
Bsp1407I TGTACA 1 cut(s) 1125
BspACI CCGC 2 cut(s) 473, 1857
BspANI GGCC 6 cut(s) 429, 441, 601, 1179, 1448, 1936
BspCNI CTCAG 1 cut(s) 434
BspDI ATCGAT 1 cut(s) 621
BspEI TCCGGA 1 cut(s) 642
BspLI GGNNCC 7 cut(s) 367, 406, 407, 709, 1111, 1349, 1662
BspMAI CTGCAG 1 cut(s) 2032
BspPI GGATC 8 cut(s) 268, 653, 827, 926, 1055, 1307, 1614, 1838
BspT104I TTCGAA 1 cut(s) 1971
BspT107I GGYRCC 3 cut(s) 365, 707, 1347
BsrFI RCCGGY 2 cut(s) 368, 1148
BsrGI TGTACA 1 cut(s) 1125
BsrI ACTGG 4 cut(s) 1111, 1226, 1684, 2068
BssAI RCCGGY 2 cut(s) 368, 1148
BssECI CCNNGG 3 cut(s) 602, 870, 1180
BssNI GRCGYC 1 cut(s) 570
BssT1I CCWWGG 1 cut(s) 602
Bst2UI CCWGG 6 cut(s) 253, 598, 871, 1142, 1181, 1450
Bst4CI ACNGT 6 cut(s) 75, 529, 580, 739, 1052, 1633
Bst6I CTCTTC 1 cut(s) 98
BstACI GRCGYC 1 cut(s) 570
BstAPI GCANNNNNTGC 1 cut(s) 899
BstAUI TGTACA 1 cut(s) 1125
BstBAI YACGTR 1 cut(s) 1927
BstBI TTCGAA 1 cut(s) 1971
BstC8I GCNNGC 1 cut(s) 2087
BstDEI CTNAG 5 cut(s) 391, 421, 674, 918, 1313
BstF5I GGATG 2 cut(s) 507, 539
BstH2I RGCGCY 2 cut(s) 180, 398
BstHHI GCGC 5 cut(s) 179, 218, 340, 397, 910
BstMAI GTCTC 1 cut(s) 1521
BstMCI CGRYCG 1 cut(s) 233
BstMWI GCNNNNNNNGC 2 cut(s) 426, 899
BstNI CCWGG 6 cut(s) 253, 598, 871, 1142, 1181, 1450
BstNSI RCATGY 1 cut(s) 1743
BstSCI CCNGG 8 cut(s) 232, 251, 547, 596, 869, 1140, 1179, 1448
BstSFI CTRYAG 2 cut(s) 1708, 2028
BstSLI GKGCMC 1 cut(s) 895
BstX2I RGATCY 1 cut(s) 1060
BstYI RGATCY 1 cut(s) 1060
Bsu15I ATCGAT 1 cut(s) 621
Bsu36I CCTNAGG 1 cut(s) 918
BsuRI GGCC 6 cut(s) 429, 441, 601, 1179, 1448, 1936
BsuTUI ATCGAT 1 cut(s) 621
BtsCI GGATG 2 cut(s) 507, 539
BtsIMutI CAGTG 3 cut(s) 576, 1057, 1080
Cac8I GCNNGC 1 cut(s) 2087
CfoI GCGC 5 cut(s) 179, 218, 340, 397, 910
Cfr10I RCCGGY 2 cut(s) 368, 1148
Cfr13I GGNCC 2 cut(s) 405, 1109
ClaI ATCGAT 1 cut(s) 621
Csp6I GTAC 7 cut(s) 256, 460, 708, 1126, 1282, 1453, 1961
CspAI ACCGGT 1 cut(s) 1148
CviAII CATG 9 cut(s) 25, 360, 431, 557, 1387, 1549, 1610, 1657, 1740
CviQI GTAC 7 cut(s) 256, 460, 708, 1126, 1282, 1453, 1961
DdeI CTNAG 5 cut(s) 391, 421, 674, 918, 1313
EaeI YGGCCR 1 cut(s) 1177
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 602
Eco147I AGGCCT 2 cut(s) 601, 1936
Eco32I GATATC 2 cut(s) 487, 1251
Eco47I GGWCC 2 cut(s) 405, 1109
Eco47III AGCGCT 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 767
Eco81I CCTNAGG 1 cut(s) 918
Eco88I CYCGRG 2 cut(s) 130, 165
EcoO109I RGGNCCY 1 cut(s) 405
EcoRII CCWGG 6 cut(s) 251, 596, 869, 1140, 1179, 1448
EcoRV GATATC 2 cut(s) 487, 1251
EcoT14I CCWWGG 1 cut(s) 602
ErhI CCWWGG 1 cut(s) 602
FaeI CATG 9 cut(s) 28, 363, 434, 560, 1390, 1552, 1613, 1660, 1743
FalI AAGNNNNNCTT 8 cut(s) 740, 772, 880, 912, 1158, 1190, 2074, 2106
FaqI GGGAC 4 cut(s) 391, 887, 1095, 1117
FatI CATG 9 cut(s) 24, 359, 430, 556, 1386, 1548, 1609, 1656, 1739
FauNDI CATATG 1 cut(s) 1231
FblI GTMKAC 2 cut(s) 531, 1309
FokI GGATG 2 cut(s) 494, 526
FspBI CTAG 8 cut(s) 380, 660, 912, 924, 956, 992, 1539, 1689
GlaI GCGC 5 cut(s) 178, 217, 339, 396, 909
HaeII RGCGCY 2 cut(s) 180, 398
HaeIII GGCC 6 cut(s) 429, 441, 601, 1179, 1448, 1936
HhaI GCGC 5 cut(s) 179, 218, 340, 397, 910
Hin1I GRCGYC 1 cut(s) 570
Hin1II CATG 9 cut(s) 28, 363, 434, 560, 1390, 1552, 1613, 1660, 1743
Hin6I GCGC 5 cut(s) 177, 216, 338, 395, 908
HinP1I GCGC 5 cut(s) 177, 216, 338, 395, 908
HincII GTYRAC 5 cut(s) 532, 574, 591, 1310, 1437
HindII GTYRAC 5 cut(s) 532, 574, 591, 1310, 1437
HindIII AAGCTT 3 cut(s) 118, 801, 1172
HinfI GANTC 9 cut(s) 54, 1209, 1259, 1324, 1406, 1556, 1719, 1827, 1954
HpaI GTTAAC 1 cut(s) 1437
HphI GGTGA 8 cut(s) 32, 199, 301, 383, 809, 1085, 1871, 1907
Hpy166II GTNNAC 7 cut(s) 532, 574, 591, 893, 1310, 1378, 1437
Hpy188I TCNGA 7 cut(s) 278, 544, 747, 931, 1323, 2044, 2053
Hpy8I GTNNAC 7 cut(s) 532, 574, 591, 893, 1310, 1378, 1437
Hpy99I CGWCG 4 cut(s) 533, 536, 572, 1048
HpyCH4III ACNGT 6 cut(s) 75, 529, 580, 739, 1052, 1633
HpyCH4IV ACGT 2 cut(s) 570, 1926
HpyCH4V TGCA 7 cut(s) 65, 107, 893, 980, 1333, 1522, 2030
HpyF10VI GCNNNNNNNGC 2 cut(s) 426, 899
HpyF3I CTNAG 5 cut(s) 391, 421, 674, 918, 1313
HpySE526I ACGT 2 cut(s) 570, 1926
Hsp92I GRCGYC 1 cut(s) 570
Hsp92II CATG 9 cut(s) 28, 363, 434, 560, 1390, 1552, 1613, 1660, 1743
HspAI GCGC 5 cut(s) 177, 216, 338, 395, 908
KflI GGGWCCC 1 cut(s) 405
Kpn2I TCCGGA 1 cut(s) 642
KpnI GGTACC 1 cut(s) 711
KspAI GTTAAC 1 cut(s) 1437
LmnI GCTCC 3 cut(s) 907, 1666, 2029
LweI GCATC 4 cut(s) 337, 1066, 1327, 1484
MaeI CTAG 8 cut(s) 380, 660, 912, 924, 956, 992, 1539, 1689
MaeII ACGT 2 cut(s) 570, 1926
MaeIII GTNAC 3 cut(s) 20, 650, 1151
MflI RGATCY 1 cut(s) 1060
MhlI GDGCHC 2 cut(s) 895, 1915
MlsI TGGCCA 1 cut(s) 1179
MluNI TGGCCA 1 cut(s) 1179
MlyI GAGTC 1 cut(s) 1836
MmeI TCCRAC 2 cut(s) 301, 2076
MnlI CCTC 9 cut(s) 215, 452, 858, 1156, 1178, 1239, 1438, 1926, 2069
Mox20I TGGCCA 1 cut(s) 1179
MroI TCCGGA 1 cut(s) 642
MscI TGGCCA 1 cut(s) 1179
MseI TTAA 8 cut(s) 116, 123, 138, 356, 1436, 1889, 1965, 2104
MslI CAYNNNNRTG 1 cut(s) 18
Msp20I TGGCCA 1 cut(s) 1179
MspR9I CCNGG 8 cut(s) 234, 253, 549, 598, 871, 1142, 1181, 1450
Mva1269I GAATGC 1 cut(s) 871
MvaI CCWGG 6 cut(s) 253, 598, 871, 1142, 1181, 1450
MwoI GCNNNNNNNGC 2 cut(s) 426, 899
NciI CCSGG 2 cut(s) 234, 549
NdeI CATATG 1 cut(s) 1231
NlaIII CATG 9 cut(s) 28, 363, 434, 560, 1390, 1552, 1613, 1660, 1743
NlaIV GGNNCC 7 cut(s) 367, 406, 407, 709, 1111, 1349, 1662
NmeAIII GCCGAG 3 cut(s) 417, 764, 1576
NmuCI GTSAC 1 cut(s) 20
NspI RCATGY 1 cut(s) 1743
NspV TTCGAA 1 cut(s) 1971
OliI CACNNNNGTG 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 165
PceI AGGCCT 2 cut(s) 601, 1936
PcsI WCGNNNNNNNCGW 1 cut(s) 540
PctI GAATGC 1 cut(s) 871
PfeI GAWTC 8 cut(s) 54, 1209, 1259, 1324, 1406, 1556, 1719, 1954
PflMI CCANNNNNTGG 1 cut(s) 603
PinAI ACCGGT 1 cut(s) 1148
PleI GAGTC 1 cut(s) 1835
PpsI GAGTC 1 cut(s) 1835
Ppu21I YACGTR 1 cut(s) 1927
PpuMI RGGWCCY 1 cut(s) 405
PsiI TTATAA 1 cut(s) 1203
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 6 cut(s) 251, 596, 869, 1140, 1179, 1448
PspGI CCWGG 6 cut(s) 251, 596, 869, 1140, 1179, 1448
PspN4I GGNNCC 7 cut(s) 367, 406, 407, 709, 1111, 1349, 1662
PspPI GGNCC 2 cut(s) 405, 1109
PspPPI RGGWCCY 1 cut(s) 405
PstI CTGCAG 1 cut(s) 2032
PsuI RGATCY 1 cut(s) 1060
RsaI GTAC 7 cut(s) 257, 461, 709, 1127, 1283, 1454, 1962
RsaNI GTAC 7 cut(s) 256, 460, 708, 1126, 1282, 1453, 1961
RseI CAYNNNNRTG 1 cut(s) 18
SalI GTCGAC 2 cut(s) 530, 1308
SaqAI TTAA 8 cut(s) 116, 123, 138, 356, 1436, 1889, 1965, 2104
Sau96I GGNCC 2 cut(s) 405, 1109
ScaI AGTACT 1 cut(s) 1962
SchI GAGTC 1 cut(s) 1836
ScrFI CCNGG 8 cut(s) 234, 253, 549, 598, 871, 1142, 1181, 1450
SduI GDGCHC 2 cut(s) 895, 1915
SfaNI GCATC 4 cut(s) 337, 1066, 1327, 1484
SfcI CTRYAG 2 cut(s) 1708, 2028
Sfr274I CTCGAG 1 cut(s) 165
SfuI TTCGAA 1 cut(s) 1971
SgrDI CGTCGACG 1 cut(s) 530
SinI GGWCC 2 cut(s) 405, 1109
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 1 cut(s) 165
SmoI CTYRAG 1 cut(s) 165
SpeI ACTAGT 1 cut(s) 955
SseBI AGGCCT 2 cut(s) 601, 1936
SsiI CCGC 2 cut(s) 473, 1857
SspI AATATT 1 cut(s) 1789
SspMI CTAG 8 cut(s) 380, 660, 912, 924, 956, 992, 1539, 1689
StuI AGGCCT 2 cut(s) 601, 1936
StyD4I CCNGG 8 cut(s) 232, 251, 547, 596, 869, 1140, 1179, 1448
StyI CCWWGG 1 cut(s) 602
TaaI ACNGT 6 cut(s) 75, 529, 580, 739, 1052, 1633
TaiI ACGT 2 cut(s) 573, 1929
TatI WGTACW 2 cut(s) 1125, 1960
TfiI GAWTC 8 cut(s) 54, 1209, 1259, 1324, 1406, 1556, 1719, 1954
Tru1I TTAA 8 cut(s) 116, 123, 138, 356, 1436, 1889, 1965, 2104
Tru9I TTAA 8 cut(s) 116, 123, 138, 356, 1436, 1889, 1965, 2104
TscAI CASTG 3 cut(s) 583, 1057, 1087
TseFI GTSAC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 6 cut(s) 537, 716, 1071, 1104, 1201, 1375
TspGWI ACGGA 2 cut(s) 1061, 1968
TspRI CASTG 3 cut(s) 583, 1057, 1087
Van91I CCANNNNNTGG 1 cut(s) 603
VneI GTGCAC 1 cut(s) 891
VpaK11BI GGWCC 2 cut(s) 405, 1109
XapI RAATTY 6 cut(s) 194, 316, 479, 832, 1091, 2000
XceI RCATGY 1 cut(s) 1743
XcmI CCANNNNNNNNNTGG 2 cut(s) 233, 1187
XhoI CTCGAG 1 cut(s) 165
XmiI GTMKAC 2 cut(s) 531, 1309
XspI CTAG 8 cut(s) 380, 660, 912, 924, 956, 992, 1539, 1689
ZraI GACGTC 1 cut(s) 571
ZrmI AGTACT 1 cut(s) 1962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.