Rh5CG246800

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
25881495 .. 25892929
11435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG246800.1

Sequence Viewer

Length: 2178 bp
ATGGCTGTCAACATACCAGTACTCCAGTTCTCACCAGAGCAGCTTCAGTTCCTTCTTCTTCTCTTGTTTGTTTTAACCTTCTCTGCAACCCCATTGACCTTCAACTTCTCCAGCTTTTCCCCCAACACCAGGACTCTATTTCTAGAGGGAGATGCTTACACCGACGGCTCCCTCCGACTCACCAAAAGTGCTCTTGGTGACGCAATGAATGAGAGCACCGGTAGAGCCACCTTCGGTGAATCGTTCCTCCTCCGGCAGAATGAAAAACTAGCTGATTTCACTTCAAGTTTCATATTCTCCATTAACTCCACCAATGACACCAACTGCGGTGACGGCTTGGTGTTCTTCCTTGCTCCAAATGGCTCCTTACTCGACCAGGCCTTAGGAAGAGGTAGCAAACTTGGCCTCCCTGTCAACATTACGCTGCCAAAATTTACCACGAGCTACTCGTTTGTGGCAGTCGAGTTTGATATCTACCCTAATGGTCCTACTTCAGGCCAACCAACAATCGAAGATCCTAAATACGATCATGTGGGGATCGACATCAACTCTGTCAAGTCTTATCTTACCACGGAATGGAGTGGTGGTATCATTGGAGGAAAACAAAATAATGCCACAATTAGCTACAACTCTAGCTCAAAAAATCTTAGTGTTGCCTTCACTACTTTTGTAGATCGTTACAGCAAAGTACAGGTGATCAAAAAATTTTATTGCTTGATTGATCTGCTTCAATACTTGCCCGATAGGGTCATTGTTGGATTCTCTGCTTCCACGGGTGCTGCAGTTGCTGTGCATAAGATCATTGCATGGAATTTTACCTCCACTCTTCTGGTGGATGATAATTCGACAAACAACAATCCTCTGGCTGGCAATAGTACGACGACGTCCGACAACAACGTAGGACTAGCAGTCGGATTGGGTGTTGGTGGATGTGTTACCTTGGTTGGTGCATTGGCTGTGGTTTGGGAGAAGCCAATCTCTTACCACTTCAAGATACCTTGGACACCACCCAATGAAGGATTCATACAGATCAAGAGTGATGGAGATGCCATAGAGATGGTGAAGATGATGCCATTGAAGAAGAGGCAGATAACTGTGTACATTACAGGTGGGGGTCCTAGGAAAAAAGAAGAAGCATATGTTGAGTTTGCATTGCCACCCGATGAAGATTTTGTCAATCCTTTGAACAATCAGACTTTAAGAGAGAAGGAAAGGGCTTTTTTTGAAGCAAACTTGATGGCTAGCCATGGTTCTGCTGGCAATATTGTGGGTGAGGATGGGAGTGGAGTAAATGTGGAAGGTGGACCAAGTCAGTCCACTTTTGCTGGTTTATCTGATATTGTACCAGACATCATGGGTTCACAAGCATGTGTTGGCCAAGGTGAGGTGGGGCAGGGTGGTAATACAGCAACAAGATATGGGCATATGGGTAACTTGCAGCCCCCTAAAGCCAAACCTAGAAGGGTGAAACACACTGCTAAAAGATTGTGGCCTACATCTGCCAGGGATGCTTTGAACAAAAAACTAGAGGATATAGAGAAGAGGGCTAGAGAGGGAGGTGAGAAAAGGGAAAGAGAGGAGTTTGAGAGAGCTAAGAGAGAGGATGCCGAATTCAGAGAGAGTCAAGCTTCTGCTGCAAAGGCAAGGGAAGAAGCAAAGCTAAGAGAAAGGGAGGCTTCTGAGAAGAGAGCAAGAGATGCATTGGCTGTGAGGCAACAGTTGGCTGCTGAATTAGAGAAGAGGCAAGCAGAGAAGCAAAAATCTAAGGTTGTTGGGAAGCAAACATCTAAGGCTGCACAAAACAAGGGGAAGGAGCCCATTCATCATAAGGCTATGGCAAACAGAAAGGGGAAGAAGCCTAGAGAGCCAAGATATAACACAAGGCATAAAGGGCAGAAGAAGTTTGAAGCACAAGTTGAGGAGGATGATGATAGCAGTGATGGGTCTGACTTCTATGTTGATTCAGACTATGACATTGAGAATGATGAGTGTGATGATGTTCAATTTGAAGAAAATGTCACAGAGCCGAGAGTTGTACCAGAGGATGAAGAGATGGGTTTCACTGGCTACTGTTCTGAACAAGCCAATGGCCCGACGCCACCTGTCCCCTGCGCCCACCCACTGTCGCTACGCGACAAAATAGCAATTCAATCTGGTCGGCCACATGGCGCGTTGTGA

Protein Analysis

725

Amino Acids

79.53

Weight (kDa)

5.85

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 32 - 282 1.6e-52 Legume lectin domain
Lectin_L-type_dom PF18483 56 - 267 4.3e-07 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 887
AccB7I CCANNNNNTGG 1 cut(s) 576
AccII CGCG 2 cut(s) 2133, 2171
AciI CCGC 1 cut(s) 327
AclWI GGATC 2 cut(s) 509, 545
AcoI YGGCCR 2 cut(s) 1375, 2159
AcsI RAATTY 4 cut(s) 431, 704, 811, 1610
AcuI CTGAAG 2 cut(s) 29, 477
AcyI GRCGYC 2 cut(s) 884, 2096
AfaI GTAC 6 cut(s) 21, 690, 877, 1100, 1344, 2037
AfiI CCNNNNNNNGG 6 cut(s) 129, 494, 576, 866, 1016, 1384
AgeI ACCGGT 1 cut(s) 218
AhdI GACNNNNNGTC 1 cut(s) 908
AjnI CCWGG 3 cut(s) 128, 375, 1502
AjuI GAANNNNNNNTTGG 2 cut(s) 1004, 1036
AluBI AGCT 9 cut(s) 43, 114, 272, 444, 624, 636, 1592, 1628, 1660
AluI AGCT 9 cut(s) 43, 114, 272, 444, 624, 636, 1592, 1628, 1660
Alw21I GWGCWC 2 cut(s) 193, 218
AlwI GGATC 2 cut(s) 509, 545
AlwNI CAGNNNCTG 1 cut(s) 788
AoxI GGCC 7 cut(s) 378, 403, 496, 1375, 1490, 2089, 2159
ApeKI GCWGC 7 cut(s) 40, 424, 779, 1438, 1634, 1724, 1793
ApoI RAATTY 4 cut(s) 431, 704, 811, 1610
AsiGI ACCGGT 1 cut(s) 218
AspA2I CCTAGG 1 cut(s) 1118
AspLEI GCGC 2 cut(s) 2114, 2171
AspS9I GGNCC 4 cut(s) 485, 1115, 1304, 2090
AsuNHI GCTAGC 1 cut(s) 1241
AvaII GGWCC 3 cut(s) 485, 1115, 1304
AvrII CCTAGG 1 cut(s) 1118
AxyI CCTNAGG 1 cut(s) 382
BalI TGGCCA 1 cut(s) 1377
BanII GRGCYC 1 cut(s) 1818
BarI GAAGNNNNNNTAC 2 cut(s) 1008, 1040
BauI CACGAG 1 cut(s) 439
Bbv12I GWGCWC 2 cut(s) 193, 218
BbvI GCAGC 7 cut(s) 52, 411, 766, 1450, 1621, 1711, 1780
BccI CCATC 6 cut(s) 1034, 1051, 1231, 1271, 1934, 2047
BceAI ACGGC 2 cut(s) 181, 349
BciT130I CCWGG 3 cut(s) 130, 377, 1504
BclI TGATCA 1 cut(s) 696
BfmI CTRYAG 1 cut(s) 780
BisI GCNGC 7 cut(s) 41, 425, 780, 1439, 1635, 1725, 1794
BlnI CCTAGG 1 cut(s) 1118
BlsI GCNGC 7 cut(s) 42, 426, 781, 1440, 1636, 1726, 1795
BmcAI AGTACT 1 cut(s) 21
Bme1390I CCNGG 3 cut(s) 130, 377, 1504
Bme18I GGWCC 3 cut(s) 485, 1115, 1304
BmeRI GACNNNNNGTC 1 cut(s) 908
BmgT120I GGNCC 4 cut(s) 485, 1115, 1304, 2090
BmiI GGNNCC 4 cut(s) 169, 364, 1116, 1815
BmrFI CCNGG 3 cut(s) 130, 377, 1504
BmsI GCATC 6 cut(s) 142, 1036, 1059, 1498, 1594, 1687
BmtI GCTAGC 1 cut(s) 1245
BpmI CTGGAG 2 cut(s) 8, 94
BsaBI GATNNNNATC 1 cut(s) 542
BsaHI GRCGYC 2 cut(s) 884, 2096
BsaJI CCNNGG 8 cut(s) 570, 771, 939, 998, 1118, 1246, 1378, 1503
BsaWI WCCGGW 1 cut(s) 218
BsaXI ACNNNNNCTCC 8 cut(s) 6, 36, 390, 420, 571, 601, 1278, 1308
Bsc4I CCNNNNNNNGG 6 cut(s) 129, 494, 576, 866, 1016, 1384
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 17, 25, 2068
Bse21I CCTNAGG 1 cut(s) 382
Bse3DI GCAATG 3 cut(s) 210, 801, 1151
Bse8I GATNNNNATC 1 cut(s) 542
BseBI CCWGG 3 cut(s) 130, 377, 1504
BseDI CCNNGG 8 cut(s) 570, 771, 939, 998, 1118, 1246, 1378, 1503
BseGI GGATG 7 cut(s) 841, 935, 1282, 1513, 1609, 1930, 2050
BseJI GATNNNNATC 1 cut(s) 542
BseLI CCNNNNNNNGG 6 cut(s) 129, 494, 576, 866, 1016, 1384
BseMI GCAATG 3 cut(s) 210, 801, 1151
BseMII CTCAG 1 cut(s) 1671
BseNI ACTGG 3 cut(s) 17, 25, 2068
BseRI GAGGAG 3 cut(s) 239, 1592, 1934
BseXI GCAGC 7 cut(s) 52, 411, 766, 1450, 1621, 1711, 1780
BsgI GTGCAG 1 cut(s) 1779
Bsh1236I CGCG 2 cut(s) 2133, 2171
BshFI GGCC 7 cut(s) 380, 405, 498, 1377, 1492, 2091, 2161
BshTI ACCGGT 1 cut(s) 218
BsiHKAI GWGCWC 2 cut(s) 193, 218
BsiSI CCGG 2 cut(s) 219, 253
BslFI GGGAC 1 cut(s) 2090
BslI CCNNNNNNNGG 6 cut(s) 129, 494, 576, 866, 1016, 1384
BsmFI GGGAC 1 cut(s) 2090
BsnI GGCC 7 cut(s) 380, 405, 498, 1377, 1492, 2091, 2161
Bsp1286I GDGCHC 3 cut(s) 193, 218, 1818
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
Bsp19I CCATGG 1 cut(s) 1246
BspACI CCGC 1 cut(s) 327
BspANI GGCC 7 cut(s) 380, 405, 498, 1377, 1492, 2091, 2161
BspCNI CTCAG 1 cut(s) 1672
BspFNI CGCG 2 cut(s) 2133, 2171
BspLI GGNNCC 4 cut(s) 169, 364, 1116, 1815
BspMAI CTGCAG 1 cut(s) 784
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 2 cut(s) 509, 545
BsrDI GCAATG 3 cut(s) 210, 801, 1151
BsrFI RCCGGY 1 cut(s) 218
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 3 cut(s) 17, 25, 2068
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 8 cut(s) 570, 771, 939, 998, 1118, 1246, 1378, 1503
BssMI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
BssNI GRCGYC 2 cut(s) 884, 2096
BssSI CACGAG 1 cut(s) 439
BssT1I CCWWGG 5 cut(s) 939, 998, 1118, 1246, 1378
Bst2BI CACGAG 1 cut(s) 439
Bst2UI CCWGG 3 cut(s) 130, 377, 1504
Bst4CI ACNGT 4 cut(s) 1096, 1719, 2072, 2124
Bst6I CTCTTC 7 cut(s) 382, 831, 1076, 1535, 1679, 1733, 2043
BstACI GRCGYC 2 cut(s) 884, 2096
BstAPI GCANNNNNTGC 1 cut(s) 1697
BstAUI TGTACA 1 cut(s) 1098
BstC8I GCNNGC 4 cut(s) 868, 1243, 1258, 1746
BstDEI CTNAG 7 cut(s) 382, 647, 1593, 1661, 1680, 1764, 1788
BstDSI CCRYGG 3 cut(s) 570, 771, 1246
BstENI CCTNNNNNAGG 1 cut(s) 492
BstF5I GGATG 7 cut(s) 841, 935, 1282, 1513, 1609, 1930, 2050
BstFNI CGCG 2 cut(s) 2133, 2171
BstHHI GCGC 2 cut(s) 2114, 2171
BstKTI GATC 8 cut(s) 517, 529, 540, 676, 699, 724, 801, 1032
BstMBI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
BstMWI GCNNNNNNNGC 9 cut(s) 333, 402, 785, 1508, 1634, 1640, 1697, 1864, 1891
BstNI CCWGG 3 cut(s) 130, 377, 1504
BstNSI RCATGY 1 cut(s) 1371
BstSCI CCNGG 3 cut(s) 128, 375, 1502
BstSFI CTRYAG 1 cut(s) 780
BstUI CGCG 2 cut(s) 2133, 2171
BstV1I GCAGC 7 cut(s) 52, 411, 766, 1450, 1621, 1711, 1780
BstX2I RGATCY 1 cut(s) 514
BstXI CCANNNNNNTGG 2 cut(s) 829, 1057
BstYI RGATCY 1 cut(s) 514
Bsu36I CCTNAGG 1 cut(s) 382
BsuRI GGCC 7 cut(s) 380, 405, 498, 1377, 1492, 2091, 2161
BtgI CCRYGG 3 cut(s) 570, 771, 1246
BtsCI GGATG 7 cut(s) 841, 935, 1282, 1513, 1609, 1930, 2050
BtsI GCAGTG 2 cut(s) 1473, 1942
BtsIMutI CAGTG 4 cut(s) 1473, 1942, 2061, 2120
Cac8I GCNNGC 4 cut(s) 868, 1243, 1258, 1746
CaiI CAGNNNCTG 1 cut(s) 788
CfoI GCGC 2 cut(s) 2114, 2171
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 485, 1115, 1304, 2090
CseI GACGC 2 cut(s) 209, 2104
Csp6I GTAC 6 cut(s) 20, 689, 876, 1099, 1343, 2036
CspAI ACCGGT 1 cut(s) 218
CviAII CATG 6 cut(s) 530, 807, 1247, 1354, 1368, 2165
CviQI GTAC 6 cut(s) 20, 689, 876, 1099, 1343, 2036
DdeI CTNAG 7 cut(s) 382, 647, 1593, 1661, 1680, 1764, 1788
DpnI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1031
DpnII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
DriI GACNNNNNGTC 1 cut(s) 908
EaeI YGGCCR 2 cut(s) 1375, 2159
Eam1104I CTCTTC 7 cut(s) 382, 831, 1076, 1535, 1679, 1733, 2043
Eam1105I GACNNNNNGTC 1 cut(s) 908
EarI CTCTTC 7 cut(s) 382, 831, 1076, 1535, 1679, 1733, 2043
Eco130I CCWWGG 5 cut(s) 939, 998, 1118, 1246, 1378
Eco147I AGGCCT 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 1818
Eco32I GATATC 1 cut(s) 472
Eco47I GGWCC 3 cut(s) 485, 1115, 1304
Eco57I CTGAAG 2 cut(s) 29, 477
Eco81I CCTNAGG 1 cut(s) 382
EcoNI CCTNNNNNAGG 1 cut(s) 492
EcoO109I RGGNCCY 1 cut(s) 1115
EcoRI GAATTC 1 cut(s) 1610
EcoRII CCWGG 3 cut(s) 128, 375, 1502
EcoRV GATATC 1 cut(s) 472
EcoT14I CCWWGG 5 cut(s) 939, 998, 1118, 1246, 1378
EcoT22I ATGCAT 1 cut(s) 1702
EcoT38I GRGCYC 1 cut(s) 1818
ErhI CCWWGG 5 cut(s) 939, 998, 1118, 1246, 1378
FaeI CATG 6 cut(s) 533, 810, 1250, 1357, 1371, 2168
FalI AAGNNNNNCTT 2 cut(s) 1660, 1692
FaqI GGGAC 1 cut(s) 2090
FatI CATG 6 cut(s) 529, 806, 1246, 1353, 1367, 2164
FauNDI CATATG 2 cut(s) 1138, 1425
FbaI TGATCA 1 cut(s) 696
Fnu4HI GCNGC 7 cut(s) 41, 425, 780, 1439, 1635, 1725, 1794
FokI GGATG 7 cut(s) 848, 942, 1289, 1520, 1616, 1937, 2057
FriOI GRGCYC 1 cut(s) 1818
Fsp4HI GCNGC 7 cut(s) 41, 425, 780, 1439, 1635, 1725, 1794
GlaI GCGC 2 cut(s) 2113, 2170
GluI GCNGC 7 cut(s) 41, 425, 780, 1439, 1635, 1725, 1794
GsuI CTGGAG 2 cut(s) 8, 94
HaeIII GGCC 7 cut(s) 380, 405, 498, 1377, 1492, 2091, 2161
HapII CCGG 2 cut(s) 219, 253
HgaI GACGC 2 cut(s) 209, 2104
HhaI GCGC 2 cut(s) 2114, 2171
Hin1I GRCGYC 2 cut(s) 884, 2096
Hin1II CATG 6 cut(s) 533, 810, 1250, 1357, 1371, 2168
Hin6I GCGC 2 cut(s) 2112, 2169
HinP1I GCGC 2 cut(s) 2112, 2169
HincII GTYRAC 2 cut(s) 10, 415
HindII GTYRAC 2 cut(s) 10, 415
HindIII AAGCTT 1 cut(s) 1626
HinfI GANTC 7 cut(s) 133, 177, 239, 759, 1020, 1621, 1961
HpaII CCGG 2 cut(s) 219, 253
Hpy166II GTNNAC 6 cut(s) 10, 415, 1099, 1304, 1317, 1361
Hpy188III TCNNGA 3 cut(s) 143, 991, 1033
Hpy8I GTNNAC 6 cut(s) 10, 415, 1099, 1304, 1317, 1361
Hpy99I CGWCG 4 cut(s) 167, 883, 886, 2098
HpyCH4III ACNGT 4 cut(s) 1096, 1719, 2072, 2124
HpyCH4IV ACGT 2 cut(s) 884, 897
HpyF10VI GCNNNNNNNGC 9 cut(s) 333, 402, 785, 1508, 1634, 1640, 1697, 1864, 1891
HpyF3I CTNAG 7 cut(s) 382, 647, 1593, 1661, 1680, 1764, 1788
HpySE526I ACGT 2 cut(s) 884, 897
Hsp92I GRCGYC 2 cut(s) 884, 2096
Hsp92II CATG 6 cut(s) 533, 810, 1250, 1357, 1371, 2168
HspAI GCGC 2 cut(s) 2112, 2169
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
LmnI GCTCC 4 cut(s) 173, 358, 368, 1813
Lsp1109I GCAGC 7 cut(s) 52, 411, 766, 1450, 1621, 1711, 1780
LweI GCATC 6 cut(s) 142, 1036, 1059, 1498, 1594, 1687
MaeII ACGT 2 cut(s) 884, 897
MaeIII GTNAC 6 cut(s) 197, 329, 677, 934, 1430, 2017
MalI GATC 8 cut(s) 516, 528, 539, 675, 698, 723, 800, 1031
MboI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
MflI RGATCY 1 cut(s) 514
MhlI GDGCHC 3 cut(s) 193, 218, 1818
MlsI TGGCCA 1 cut(s) 1377
MluCI AATT 9 cut(s) 431, 618, 704, 811, 841, 1610, 1730, 2003, 2145
MluNI TGGCCA 1 cut(s) 1377
MlyI GAGTC 3 cut(s) 127, 171, 1630
MmeI TCCRAC 4 cut(s) 199, 736, 892, 912
Mox20I TGGCCA 1 cut(s) 1377
Mph1103I ATGCAT 1 cut(s) 1702
MscI TGGCCA 1 cut(s) 1377
MseI TTAA 3 cut(s) 74, 303, 1199
MslI CAYNNNNRTG 2 cut(s) 1055, 1366
Msp20I TGGCCA 1 cut(s) 1377
MspI CCGG 2 cut(s) 219, 253
MspR9I CCNGG 3 cut(s) 130, 377, 1504
MvaI CCWGG 3 cut(s) 130, 377, 1504
MvnI CGCG 2 cut(s) 2133, 2171
MwoI GCNNNNNNNGC 9 cut(s) 333, 402, 785, 1508, 1634, 1640, 1697, 1864, 1891
NcoI CCATGG 1 cut(s) 1246
NdeI CATATG 2 cut(s) 1138, 1425
NdeII GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
NheI GCTAGC 1 cut(s) 1241
NlaIII CATG 6 cut(s) 533, 810, 1250, 1357, 1371, 2168
NlaIV GGNNCC 4 cut(s) 169, 364, 1116, 1815
NmeAIII GCCGAG 1 cut(s) 2052
NmuCI GTSAC 3 cut(s) 197, 329, 2017
NsiI ATGCAT 1 cut(s) 1702
NspI RCATGY 1 cut(s) 1371
PceI AGGCCT 1 cut(s) 380
PcsI WCGNNNNNNNCGW 1 cut(s) 446
PfeI GAWTC 4 cut(s) 239, 759, 1020, 1961
PflFI GACNNNGTC 2 cut(s) 883, 1308
PflMI CCANNNNNTGG 1 cut(s) 576
PinAI ACCGGT 1 cut(s) 218
PkrI GCNGC 7 cut(s) 42, 426, 781, 1440, 1636, 1726, 1795
PleI GAGTC 3 cut(s) 127, 171, 1629
PpsI GAGTC 3 cut(s) 127, 171, 1629
PpuMI RGGWCCY 1 cut(s) 1115
Psp5II RGGWCCY 1 cut(s) 1115
Psp6I CCWGG 3 cut(s) 128, 375, 1502
PspGI CCWGG 3 cut(s) 128, 375, 1502
PspN4I GGNNCC 4 cut(s) 169, 364, 1116, 1815
PspPI GGNCC 4 cut(s) 485, 1115, 1304, 2090
PspPPI RGGWCCY 1 cut(s) 1115
PstI CTGCAG 1 cut(s) 784
PstNI CAGNNNCTG 1 cut(s) 788
PsuI RGATCY 1 cut(s) 514
PsyI GACNNNGTC 2 cut(s) 883, 1308
RsaI GTAC 6 cut(s) 21, 690, 877, 1100, 1344, 2037
RsaNI GTAC 6 cut(s) 20, 689, 876, 1099, 1343, 2036
RseI CAYNNNNRTG 2 cut(s) 1055, 1366
SaqAI TTAA 3 cut(s) 74, 303, 1199
SatI GCNGC 7 cut(s) 41, 425, 780, 1439, 1635, 1725, 1794
Sau3AI GATC 8 cut(s) 514, 526, 537, 673, 696, 721, 798, 1029
Sau96I GGNCC 4 cut(s) 485, 1115, 1304, 2090
ScaI AGTACT 1 cut(s) 21
SchI GAGTC 3 cut(s) 127, 171, 1630
ScrFI CCNGG 3 cut(s) 130, 377, 1504
SduI GDGCHC 3 cut(s) 193, 218, 1818
SfaNI GCATC 6 cut(s) 142, 1036, 1059, 1498, 1594, 1687
SfcI CTRYAG 1 cut(s) 780
SinI GGWCC 3 cut(s) 485, 1115, 1304
SmiMI CAYNNNNRTG 2 cut(s) 1055, 1366
Sse9I AATT 9 cut(s) 431, 618, 704, 811, 841, 1610, 1730, 2003, 2145
SseBI AGGCCT 1 cut(s) 380
SsiI CCGC 1 cut(s) 327
SspI AATATT 1 cut(s) 1264
StuI AGGCCT 1 cut(s) 380
StyD4I CCNGG 3 cut(s) 128, 375, 1502
StyI CCWWGG 5 cut(s) 939, 998, 1118, 1246, 1378
TaaI ACNGT 4 cut(s) 1096, 1719, 2072, 2124
TaiI ACGT 2 cut(s) 887, 900
TaqI TCGA 5 cut(s) 372, 462, 510, 540, 845
TasI AATT 9 cut(s) 431, 618, 704, 811, 841, 1610, 1730, 2003, 2145
TatI WGTACW 3 cut(s) 19, 688, 1098
TfiI GAWTC 4 cut(s) 239, 759, 1020, 1961
Tru1I TTAA 3 cut(s) 74, 303, 1199
Tru9I TTAA 3 cut(s) 74, 303, 1199
TscAI CASTG 4 cut(s) 1480, 1942, 2068, 2127
TseFI GTSAC 3 cut(s) 197, 329, 2017
TseI GCWGC 7 cut(s) 40, 424, 779, 1438, 1634, 1724, 1793
Tsp45I GTSAC 3 cut(s) 197, 329, 2017
TspDTI ATGAA 8 cut(s) 221, 276, 280, 1012, 1029, 1179, 1811, 2061
TspGWI ACGGA 1 cut(s) 587
TspRI CASTG 4 cut(s) 1480, 1942, 2068, 2127
Tth111I GACNNNGTC 2 cut(s) 883, 1308
Van91I CCANNNNNTGG 1 cut(s) 576
VpaK11BI GGWCC 3 cut(s) 485, 1115, 1304
XagI CCTNNNNNAGG 1 cut(s) 492
XapI RAATTY 4 cut(s) 431, 704, 811, 1610
XbaI TCTAGA 1 cut(s) 142
XceI RCATGY 1 cut(s) 1371
XcmI CCANNNNNNNNNTGG 2 cut(s) 829, 1253
XmaJI CCTAGG 1 cut(s) 1118
ZraI GACGTC 1 cut(s) 885
ZrmI AGTACT 1 cut(s) 21
Zsp2I ATGCAT 1 cut(s) 1702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.