Rmu_sc0001017.1_g000022

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001017.1
Physical Location & Seq
Forward (+)
102772 .. 104727
1956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001017.1_g000022.1.cds

Sequence Viewer

Length: 1956 bp
atgatatctgtaagcagaagcaggcaggcaatctgcttcctaattttcatcaaatttttccctcactttttggctcgtccactttccttcagtataaatcaatttgattctggttcaaaaagcttggtctatgaaggtgatgccgagcctttgttgggagtgattgagctcaatacaatcactgaatttttccgtgttggacgggctacgtatgcacagccttttcacctatgggacaatactaccgggtcactcgcagacttcactactcatttcactttcatggttgatattggtaagaatgttcaaatctttggtgatggatttgccttttttcttgctcctgtggactacccgtttccacccaactctgacggtggtggtctaggattattcgagacccccatcaattttaatccaatatcccagagccaaattgtaactgtcgagtttgatgcttggtcaaacataggttgggacccagcagggccgcatattgggatcaatatcaatgaaatctcttcagttatttctgacagttggaatgttagcaacatcactgggaaggttggtaatgcatggataacttacaatgctactgccagcaacctttcggtgctttggacattcaagaataacccaaatcccgttgttttgggtactaatacttacaaacttacttaccatgtcgacttgcgaaaggttctccccgagtgggtttcaatcggtttttctgcagctactggaccgtaccctgagcggcatgttataaagtcatgggaattcaattcaaatttagacttcaatgacgagattagaagcagcagaaacaaggaaaagaagaaaaagacattcttgatcattgtcattgcagttcctatcttcattctgttgcttggagtagtcgtatgctggaagtggagaaaaaattactctagtccctcggtaaatacaaattttgagggactagtcattccaaaaaaatttgcttaccaagaattagttgctgccaccaacggctttgcaatcgatagaaggctaggcagaggagggtccggacaagtatatagaggattcctaccagatcgagaaggctgtatagttgctgtcaaaagaatcattgcggaatctgatcaagagtatgagaaggtatttaggaatgaagtcaaaatcataagccgcttaatccataaaaacctggtgcagttcattggatggtgccatgagcaaggcgaatgcttacttgtttatgcatacatggctaacaccagccttgacaaccatctatttggcagcagaacaaccttacagtgggataaaaggtacaatatagcctcaggcttagcctcagccctccattatctacatgaagatgcagagcaatgcgtcattcatagagatatcaaaccagcaaacataatgttggatgaacagttcagcactaagcttggtgattttgggatttctaagctagtggatcctcgattcaggactcagacaacgacagacacaagaggggtgccagggactttaggatacatggccccagaatacgcaatggaagggagagctactaaggaatccgacatgtatagttttggagttgtagtcctggaaattgcttgtggaaggaggacttaccaagatggacattctcacgtaccacttattaaacgggtttggcagttgcaccttgcaggaaatcttcttgatatagctgatgagagattggaaatggactatgatcaaaaccaaatgaaaatcctgttaactgttggattatggtgtactaaccgcaacagcaaggaaagaccaaaagcaggagaagcgatgaaggttcttcagcttgaagctccattgccggaacttccacgtgacacgcatgattctccagtcctgcctggacttcaacaacaatctgactctgcttcctctcaggtatcctcaacttcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

651

Amino Acids

73.2

Weight (kDa)

6.37

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 770
AccB1I GGYRCC 2 cut(s) 1218, 1519
AccBSI CCGCTC 1 cut(s) 760
AccI GTMKAC 1 cut(s) 690
AccIII TCCGGA 1 cut(s) 1055
AciI CCGC 5 cut(s) 491, 760, 1124, 1180, 1795
AclWI GGATC 3 cut(s) 509, 1472, 1485
AcsI RAATTY 6 cut(s) 53, 185, 782, 793, 955, 983
AcuI CTGAAG 3 cut(s) 73, 507, 1826
AcvI CACGTG 1 cut(s) 1874
AfaI GTAC 5 cut(s) 661, 752, 1325, 1662, 1789
AfiI CCNNNNNNNGG 5 cut(s) 155, 497, 715, 1311, 1820
AflIII ACRYGT 1 cut(s) 1587
AgsI TTSAA 9 cut(s) 117, 308, 631, 723, 787, 792, 805, 1850, 1910
AhlI ACTAGT 1 cut(s) 967
AjnI CCWGG 4 cut(s) 1197, 1522, 1611, 1900
AloI GAACNNNNNNTCC 2 cut(s) 1418, 1450
AluBI AGCT 9 cut(s) 123, 169, 740, 1447, 1471, 1571, 1718, 1846, 1853
AluI AGCT 9 cut(s) 123, 169, 740, 1447, 1471, 1571, 1718, 1846, 1853
Alw21I GWGCWC 1 cut(s) 171
Alw26I GTCTC 1 cut(s) 392
AlwI GGATC 3 cut(s) 509, 1472, 1485
AlwNI CAGNNNCTG 1 cut(s) 743
Ama87I CYCGRG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 1055
AoxI GGCC 2 cut(s) 488, 1542
ApeKI GCWGC 4 cut(s) 737, 822, 1007, 1293
ApoI RAATTY 6 cut(s) 53, 185, 782, 793, 955, 983
AspS9I GGNCC 5 cut(s) 478, 488, 746, 1053, 1543
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 4 cut(s) 149, 218, 329, 1463
AvaI CYCGRG 1 cut(s) 710
AvaII GGWCC 3 cut(s) 478, 746, 1053
AxyI CCTNAGG 1 cut(s) 1336
BamHI GGATCC 1 cut(s) 1477
BanI GGYRCC 2 cut(s) 1218, 1519
BanII GRGCYC 1 cut(s) 171
BbrPI CACGTG 1 cut(s) 1874
Bbv12I GWGCWC 1 cut(s) 171
BbvCI CCTCAGC 1 cut(s) 1348
BbvI GCAGC 4 cut(s) 749, 834, 994, 1305
BccI CCATC 5 cut(s) 314, 413, 1209, 1290, 1640
BceAI ACGGC 1 cut(s) 1033
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 4 cut(s) 1199, 1524, 1613, 1902
BciVI GTATCC 2 cut(s) 1529, 1951
BclI TGATCA 3 cut(s) 858, 1132, 1744
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 1 cut(s) 392
BcuI ACTAGT 1 cut(s) 967
BfaI CTAG 5 cut(s) 386, 936, 968, 1040, 1472
BfmI CTRYAG 1 cut(s) 735
BfuI GTATCC 2 cut(s) 1529, 1951
BisI GCNGC 7 cut(s) 491, 738, 761, 823, 1008, 1180, 1294
BlpI GCTNAGC 1 cut(s) 1342
BlsI GCNGC 7 cut(s) 492, 739, 762, 824, 1009, 1181, 1295
Bme1390I CCNGG 5 cut(s) 247, 1199, 1524, 1613, 1902
Bme18I GGWCC 3 cut(s) 478, 746, 1053
BmeT110I CYCGRG 1 cut(s) 710
BmgT120I GGNCC 5 cut(s) 478, 488, 746, 1053, 1543
BmiI GGNNCC 7 cut(s) 479, 480, 1054, 1220, 1479, 1521, 1545
BmrFI CCNGG 5 cut(s) 247, 1199, 1524, 1613, 1902
BmrI ACTGGG 1 cut(s) 570
BmsI GCATC 3 cut(s) 130, 445, 1363
BmuI ACTGGG 1 cut(s) 570
BpmI CTGGAG 1 cut(s) 1875
Bpu10I CCTNAGC 2 cut(s) 756, 1348
Bpu1102I GCTNAGC 1 cut(s) 1342
BpuMI CCSGG 1 cut(s) 247
Bsa29I ATCGAT 1 cut(s) 1029
BsaAI YACGTR 3 cut(s) 210, 1660, 1874
BsaBI GATNNNNATC 1 cut(s) 506
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 2 cut(s) 942, 1523
BsaWI WCCGGW 1 cut(s) 1055
BsaXI ACNNNNNCTCC 4 cut(s) 891, 921, 1593, 1623
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 497, 715, 1311, 1820
Bse1I ACTGG 3 cut(s) 565, 748, 1892
Bse21I CCTNAGG 1 cut(s) 1336
Bse3DI GCAATG 5 cut(s) 867, 1119, 1388, 1563, 1856
Bse8I GATNNNNATC 1 cut(s) 506
BseAI TCCGGA 1 cut(s) 1055
BseBI CCWGG 4 cut(s) 1199, 1524, 1613, 1902
BseCI ATCGAT 1 cut(s) 1029
BseDI CCNNGG 2 cut(s) 942, 1523
BseGI GGATG 2 cut(s) 1220, 1432
BseJI GATNNNNATC 1 cut(s) 506
BseLI CCNNNNNNNGG 5 cut(s) 155, 497, 715, 1311, 1820
BseMI GCAATG 5 cut(s) 867, 1119, 1388, 1563, 1856
BseMII CTCAG 5 cut(s) 747, 1350, 1362, 1508, 1949
BseNI ACTGG 3 cut(s) 565, 748, 1892
BseRI GAGGAG 1 cut(s) 1062
BseXI GCAGC 4 cut(s) 749, 834, 994, 1305
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 1223
BshFI GGCC 2 cut(s) 490, 1544
BshNI GGYRCC 2 cut(s) 1218, 1519
BshVI ATCGAT 1 cut(s) 1029
BsiHKAI GWGCWC 1 cut(s) 171
BsiHKCI CYCGRG 1 cut(s) 710
BsiSI CCGG 3 cut(s) 246, 1056, 1862
BslFI GGGAC 5 cut(s) 248, 491, 924, 978, 1540
BslI CCNNNNNNNGG 5 cut(s) 155, 497, 715, 1311, 1820
BsmAI GTCTC 1 cut(s) 392
BsmFI GGGAC 5 cut(s) 248, 491, 924, 978, 1540
BsmI GAATGC 1 cut(s) 1241
BsnI GGCC 2 cut(s) 490, 1544
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 1 cut(s) 710
Bsp1286I GDGCHC 1 cut(s) 171
Bsp13I TCCGGA 1 cut(s) 1055
Bsp143I GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
Bsp1720I GCTNAGC 1 cut(s) 1342
BspACI CCGC 5 cut(s) 491, 760, 1124, 1180, 1795
BspANI GGCC 2 cut(s) 490, 1544
BspCNI CTCAG 5 cut(s) 748, 1349, 1361, 1507, 1948
BspDI ATCGAT 1 cut(s) 1029
BspEI TCCGGA 1 cut(s) 1055
BspLI GGNNCC 7 cut(s) 479, 480, 1054, 1220, 1479, 1521, 1545
BspMAI CTGCAG 1 cut(s) 739
BspPI GGATC 3 cut(s) 509, 1472, 1485
BspT107I GGYRCC 2 cut(s) 1218, 1519
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 760
BsrDI GCAATG 5 cut(s) 867, 1119, 1388, 1563, 1856
BsrI ACTGG 3 cut(s) 565, 748, 1892
BssECI CCNNGG 2 cut(s) 942, 1523
BssMI GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
Bst2UI CCWGG 4 cut(s) 1199, 1524, 1613, 1902
Bst4CI ACNGT 7 cut(s) 377, 445, 539, 750, 1311, 1434, 1774
Bst6I CTCTTC 1 cut(s) 526
BstBAI YACGTR 3 cut(s) 210, 1660, 1874
BstC8I GCNNGC 3 cut(s) 23, 27, 604
BstDEI CTNAG 9 cut(s) 756, 1336, 1342, 1348, 1443, 1467, 1494, 1575, 1935
BstF5I GGATG 2 cut(s) 1220, 1432
BstKTI GATC 6 cut(s) 504, 861, 1087, 1135, 1480, 1747
BstMAI GTCTC 1 cut(s) 392
BstMBI GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
BstMWI GCNNNNNNNGC 3 cut(s) 212, 1259, 1826
BstNI CCWGG 4 cut(s) 1199, 1524, 1613, 1902
BstNSI RCATGY 2 cut(s) 767, 1591
BstSCI CCNGG 5 cut(s) 245, 1197, 1522, 1611, 1900
BstSFI CTRYAG 1 cut(s) 735
BstSNI TACGTA 1 cut(s) 210
BstV1I GCAGC 4 cut(s) 749, 834, 994, 1305
BstX2I RGATCY 1 cut(s) 1477
BstXI CCANNNNNNTGG 1 cut(s) 1289
BstYI RGATCY 1 cut(s) 1477
Bsu15I ATCGAT 1 cut(s) 1029
Bsu36I CCTNAGG 1 cut(s) 1336
BsuI GTATCC 2 cut(s) 1529, 1951
BsuRI GGCC 2 cut(s) 490, 1544
BsuTUI ATCGAT 1 cut(s) 1029
BtgZI GCGATG 1 cut(s) 1844
BtsCI GGATG 2 cut(s) 1220, 1432
BtsIMutI CAGTG 3 cut(s) 180, 558, 1316
Cac8I GCNNGC 3 cut(s) 23, 27, 604
CaiI CAGNNNCTG 1 cut(s) 743
Cfr13I GGNCC 5 cut(s) 478, 488, 746, 1053, 1543
ClaI ATCGAT 1 cut(s) 1029
CseI GACGC 1 cut(s) 1375
CsiI ACCWGGT 1 cut(s) 1197
Csp6I GTAC 5 cut(s) 660, 751, 1324, 1661, 1788
CviQI GTAC 5 cut(s) 660, 751, 1324, 1661, 1788
DdeI CTNAG 9 cut(s) 756, 1336, 1342, 1348, 1443, 1467, 1494, 1575, 1935
DpnI GATC 6 cut(s) 503, 860, 1086, 1134, 1479, 1746
DpnII GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
Eam1104I CTCTTC 1 cut(s) 526
EarI CTCTTC 1 cut(s) 526
Ecl136II GAGCTC 1 cut(s) 169
Eco105I TACGTA 1 cut(s) 210
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 1 cut(s) 392
Eco32I GATATC 2 cut(s) 6, 1402
Eco47I GGWCC 3 cut(s) 478, 746, 1053
Eco53kI GAGCTC 1 cut(s) 169
Eco57I CTGAAG 3 cut(s) 73, 507, 1826
Eco72I CACGTG 1 cut(s) 1874
Eco81I CCTNAGG 1 cut(s) 1336
Eco88I CYCGRG 1 cut(s) 710
EcoICRI GAGCTC 1 cut(s) 169
EcoO109I RGGNCCY 1 cut(s) 478
EcoRI GAATTC 1 cut(s) 782
EcoRII CCWGG 4 cut(s) 1197, 1522, 1611, 1900
EcoRV GATATC 2 cut(s) 6, 1402
EcoT22I ATGCAT 2 cut(s) 580, 1255
EcoT38I GRGCYC 1 cut(s) 171
FalI AAGNNNNNCTT 4 cut(s) 839, 871, 1621, 1653
FaqI GGGAC 5 cut(s) 248, 491, 924, 978, 1540
FbaI TGATCA 3 cut(s) 858, 1132, 1744
FblI GTMKAC 1 cut(s) 690
Fnu4HI GCNGC 7 cut(s) 491, 738, 761, 823, 1008, 1180, 1294
FokI GGATG 2 cut(s) 1227, 1439
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 7 cut(s) 491, 738, 761, 823, 1008, 1180, 1294
FspBI CTAG 5 cut(s) 386, 936, 968, 1040, 1472
GluI GCNGC 7 cut(s) 491, 738, 761, 823, 1008, 1180, 1294
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 1 cut(s) 1875
HaeIII GGCC 2 cut(s) 490, 1544
HapII CCGG 3 cut(s) 246, 1056, 1862
HgaI GACGC 1 cut(s) 1375
HincII GTYRAC 2 cut(s) 691, 1770
HindII GTYRAC 2 cut(s) 691, 1770
HindIII AAGCTT 2 cut(s) 121, 1445
HinfI GANTC 9 cut(s) 107, 1074, 1116, 1127, 1485, 1492, 1580, 1886, 1922
HpaI GTTAAC 1 cut(s) 1770
HpaII CCGG 3 cut(s) 246, 1056, 1862
HphI GGTGA 4 cut(s) 149, 218, 329, 1463
Hpy166II GTNNAC 5 cut(s) 80, 349, 691, 1770, 1788
Hpy188I TCNGA 6 cut(s) 373, 535, 1132, 1497, 1585, 1921
Hpy188III TCNNGA 8 cut(s) 397, 631, 856, 1056, 1088, 1136, 1489, 1709
Hpy8I GTNNAC 5 cut(s) 80, 349, 691, 1770, 1788
HpyAV CCTTC 9 cut(s) 97, 128, 559, 1029, 1085, 1141, 1556, 1623, 1828
HpyCH4III ACNGT 7 cut(s) 377, 445, 539, 750, 1311, 1434, 1774
HpyCH4IV ACGT 3 cut(s) 209, 1659, 1873
HpyF10VI GCNNNNNNNGC 3 cut(s) 212, 1259, 1826
HpyF3I CTNAG 9 cut(s) 756, 1336, 1342, 1348, 1443, 1467, 1494, 1575, 1935
HpySE526I ACGT 3 cut(s) 209, 1659, 1873
KflI GGGWCCC 1 cut(s) 478
Kpn2I TCCGGA 1 cut(s) 1055
Ksp22I TGATCA 3 cut(s) 858, 1132, 1744
KspAI GTTAAC 1 cut(s) 1770
Kzo9I GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
LmnI GCTCC 2 cut(s) 346, 1858
Lsp1109I GCAGC 4 cut(s) 749, 834, 994, 1305
LweI GCATC 3 cut(s) 130, 445, 1363
MabI ACCWGGT 1 cut(s) 1197
MaeI CTAG 5 cut(s) 386, 936, 968, 1040, 1472
MaeII ACGT 3 cut(s) 209, 1659, 1873
MaeIII GTNAC 3 cut(s) 249, 439, 1874
MalI GATC 6 cut(s) 503, 860, 1086, 1134, 1479, 1746
MbiI CCGCTC 1 cut(s) 760
MboI GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
MboII GAAGA 6 cut(s) 513, 853, 874, 1382, 1697, 1832
MflI RGATCY 1 cut(s) 1477
MhlI GDGCHC 1 cut(s) 171
MlyI GAGTC 2 cut(s) 1486, 1916
MmeI TCCRAC 5 cut(s) 178, 521, 1404, 1608, 1756
Mph1103I ATGCAT 2 cut(s) 580, 1255
MroI TCCGGA 1 cut(s) 1055
MseI TTAA 5 cut(s) 414, 1184, 1671, 1769, 1954
MslI CAYNNNNRTG 2 cut(s) 281, 1371
MspI CCGG 3 cut(s) 246, 1056, 1862
MspR9I CCNGG 5 cut(s) 247, 1199, 1524, 1613, 1902
Mva1269I GAATGC 1 cut(s) 1241
MvaI CCWGG 4 cut(s) 1199, 1524, 1613, 1902
MwoI GCNNNNNNNGC 3 cut(s) 212, 1259, 1826
NciI CCSGG 1 cut(s) 247
NdeII GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
NlaIV GGNNCC 7 cut(s) 479, 480, 1054, 1220, 1479, 1521, 1545
NmeAIII GCCGAG 1 cut(s) 169
NmuCI GTSAC 2 cut(s) 249, 1874
NsiI ATGCAT 2 cut(s) 580, 1255
NspI RCATGY 2 cut(s) 767, 1591
PciI ACATGT 1 cut(s) 1587
PctI GAATGC 1 cut(s) 1241
PfeI GAWTC 7 cut(s) 107, 1074, 1116, 1127, 1485, 1580, 1886
PfoI TCCNGGA 1 cut(s) 1611
PkrI GCNGC 7 cut(s) 492, 739, 762, 824, 1009, 1181, 1295
PleI GAGTC 2 cut(s) 1486, 1916
PmaCI CACGTG 1 cut(s) 1874
PmlI CACGTG 1 cut(s) 1874
PpsI GAGTC 2 cut(s) 1486, 1916
Ppu21I YACGTR 3 cut(s) 210, 1660, 1874
PpuMI RGGWCCY 1 cut(s) 478
PscI ACATGT 1 cut(s) 1587
PsiI TTATAA 1 cut(s) 770
Psp124BI GAGCTC 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 478
Psp6I CCWGG 4 cut(s) 1197, 1522, 1611, 1900
PspCI CACGTG 1 cut(s) 1874
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 4 cut(s) 1197, 1522, 1611, 1900
PspN4I GGNNCC 7 cut(s) 479, 480, 1054, 1220, 1479, 1521, 1545
PspPI GGNCC 5 cut(s) 478, 488, 746, 1053, 1543
PspPPI RGGWCCY 1 cut(s) 478
PstI CTGCAG 1 cut(s) 739
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 1 cut(s) 1477
RsaI GTAC 5 cut(s) 661, 752, 1325, 1662, 1789
RsaNI GTAC 5 cut(s) 660, 751, 1324, 1661, 1788
RseI CAYNNNNRTG 2 cut(s) 281, 1371
SacI GAGCTC 1 cut(s) 171
SalI GTCGAC 1 cut(s) 689
SaqAI TTAA 5 cut(s) 414, 1184, 1671, 1769, 1954
SatI GCNGC 7 cut(s) 491, 738, 761, 823, 1008, 1180, 1294
Sau3AI GATC 6 cut(s) 501, 858, 1084, 1132, 1477, 1744
Sau96I GGNCC 5 cut(s) 478, 488, 746, 1053, 1543
SchI GAGTC 2 cut(s) 1486, 1916
ScrFI CCNGG 5 cut(s) 247, 1199, 1524, 1613, 1902
SduI GDGCHC 1 cut(s) 171
SexAI ACCWGGT 1 cut(s) 1197
SfaNI GCATC 3 cut(s) 130, 445, 1363
SfcI CTRYAG 1 cut(s) 735
SinI GGWCC 3 cut(s) 478, 746, 1053
SmiMI CAYNNNNRTG 2 cut(s) 281, 1371
SnaBI TACGTA 1 cut(s) 210
SpeI ACTAGT 1 cut(s) 967
SsiI CCGC 5 cut(s) 491, 760, 1124, 1180, 1795
SspMI CTAG 5 cut(s) 386, 936, 968, 1040, 1472
SstI GAGCTC 1 cut(s) 171
StyD4I CCNGG 5 cut(s) 245, 1197, 1522, 1611, 1900
TaaI ACNGT 7 cut(s) 377, 445, 539, 750, 1311, 1434, 1774
TaiI ACGT 3 cut(s) 212, 1662, 1876
TaqI TCGA 6 cut(s) 396, 447, 690, 1029, 1087, 1483
TatI WGTACW 1 cut(s) 1787
TauI GCSGC 3 cut(s) 493, 763, 1182
TfiI GAWTC 7 cut(s) 107, 1074, 1116, 1127, 1485, 1580, 1886
Tru1I TTAA 5 cut(s) 414, 1184, 1671, 1769, 1954
Tru9I TTAA 5 cut(s) 414, 1184, 1671, 1769, 1954
TscAI CASTG 3 cut(s) 187, 565, 1316
TseFI GTSAC 2 cut(s) 249, 1874
TseI GCWGC 4 cut(s) 737, 822, 1007, 1293
Tsp45I GTSAC 2 cut(s) 249, 1874
TspGWI ACGGA 1 cut(s) 182
TspRI CASTG 3 cut(s) 187, 565, 1316
VpaK11BI GGWCC 3 cut(s) 478, 746, 1053
XapI RAATTY 6 cut(s) 53, 185, 782, 793, 955, 983
XceI RCATGY 2 cut(s) 767, 1591
XmiI GTMKAC 1 cut(s) 690
XspI CTAG 5 cut(s) 386, 936, 968, 1040, 1472
Zsp2I ATGCAT 2 cut(s) 580, 1255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.