Rmu_sc0007965.1_g000011

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007965.1
Physical Location & Seq
Reverse (-)
65228 .. 67271
2044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007965.1_g000011.1.cds

Sequence Viewer

Length: 1851 bp
atgtctgaaatcagaagcagcagtacacaagcaatctgcttctgtaatatttgcttcctaattattttcatcaatttcttctctcactttgctcatccactctccttcaatataactcagaccgaccagagtgcaaatggagttaactgtgaaggtaatgcccagttttcatcgggaaggattgatctcaccggaggcacttatttcgatgttggacgtgctacgtatgcagagcctttgcatctatgggacaaagttactgagtcgctggcagatttcactacacatttcaatttcatggtcaaccttggttctgatcctaacgatgggagcgccaccgatggaattgcctttttccttgctcctgttggctacggtattccacccaactctggtgcttatcgtctgggattattcaacgacaccaacgattttaatgccttgtcatccaaccagattgtagccgtagagttcgacacccttggaaacggcaaatctacttctaatctcacttaccatgttgacttgcgaaagattcttcccgaaagggttacaatcggtttttctgcttcatccggattaaaccctggtcagtattctttatattcatgggcgtttaattcgactttggtggatagtgatattagaagagccgaaagcaaggaaaagaagaaaaagatattcttgatattagtcattgcagttcctggcttgactttgacgcttggtgcaatcatatgttggttgatggtattaagaaatcggagaaacaattactccggcgaagtctctgatcttgagaagctagcctttccaaaacgatttgcttaccaagaattgtttgctgccaccaacgggtttgcagacgatagaaggctaggccaaggagggtcgggacaagtatataaaggaatcctacaagaccttggaggctgcacagttgccgtgaagagaatctttgcaagatctgatcagcaatatgagaaagtcttcatcaatgaagtcaaaatcatcagccgcttaatccatcgaaacctggtgcagttcattgggtggtgtcatgaaaaaggggaatccttacttgtttatgcatatatgcataacaccagccttgacacccatctatttggcaccagaacaaccctgcaatgggataacaggtacaagatagctttaggcttggcctcagccattcactatctacatgaagatgcagagcagtgcgttcttcatagggatatcaaatcagctaacttactattggatgatgacttcagcactaagcttggtgattttggtgttgctaagctactggatccgctattggatgatgacttcagcactaagcgtagtgattttggtattgctaagctggtggatctccacttgaggtctcagacaagaggggtggtagggacttttggatacatggccccggaatatgctactgaagggagggctagtaaggaatctgacatttatagttttggaattgtagccttggaaattgcttgcggaaggaagacttaccaagacggtgaatatcatgtgccactctttaggtgggtttggcagttgttccttgcaggaaatattctggacgcagctgatgaaagactaggaatgaattatgataaaaatgaaatgaactgcttgttgattgttggactatggtgtactcaccccaattacaaggaaagacccaaagcaggacaggtgatggaggttattcagcataaagcaccattgccggaacttccatatgacatgcatagtgatccagaactgcctcaacctcaataccattctcagatgtcctcaacttcttctagctatatatatagtacctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

616

Amino Acids

68.97

Weight (kDa)

5.85

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1130
AccIII TCCGGA 1 cut(s) 575
AciI CCGC 3 cut(s) 1018, 1319, 1515
AclWI GGATC 5 cut(s) 311, 1310, 1323, 1386, 1772
AcuI CTGAAG 3 cut(s) 1258, 1321, 1470
AfaI GTAC 4 cut(s) 25, 1163, 1678, 1846
AfiI CCNNNNNNNGG 6 cut(s) 326, 392, 855, 1149, 1150, 1709
AgsI TTSAA 3 cut(s) 109, 292, 418
AjiI CACGTC 1 cut(s) 218
AjnI CCWGG 3 cut(s) 586, 706, 1035
AluBI AGCT 8 cut(s) 805, 1172, 1250, 1285, 1309, 1372, 1607, 1833
AluI AGCT 8 cut(s) 805, 1172, 1250, 1285, 1309, 1372, 1607, 1833
Alw26I GTCTC 2 cut(s) 793, 1398
AlwI GGATC 5 cut(s) 311, 1310, 1323, 1386, 1772
AlwNI CAGNNNCTG 1 cut(s) 707
Aor13HI TCCGGA 1 cut(s) 575
AoxI GGCC 3 cut(s) 880, 1182, 1431
ApeKI GCWGC 4 cut(s) 18, 845, 933, 1604
Asp700I GAANNNNTTC 1 cut(s) 989
AspLEI GCGC 1 cut(s) 335
AspS9I GGNCC 1 cut(s) 1432
AsuC2I CCSGG 1 cut(s) 1436
AsuHPI GGTGA 5 cut(s) 181, 1301, 1550, 1673, 1729
AsuNHI GCTAGC 1 cut(s) 805
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 1 cut(s) 1130
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BbsI GAAGAC 2 cut(s) 982, 1529
BbvCI CCTCAGC 1 cut(s) 1186
BbvI GCAGC 4 cut(s) 30, 832, 920, 1616
BccI CCATC 6 cut(s) 320, 335, 742, 1035, 1128, 1714
BceAI ACGGC 3 cut(s) 449, 505, 929
BcgI CGANNNNNNTGC 8 cut(s) 113, 147, 187, 221, 329, 363, 419, 453
BciT130I CCWGG 3 cut(s) 588, 708, 1037
BciVI GTATCC 1 cut(s) 1418
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 1436
BcoDI GTCTC 2 cut(s) 793, 1398
BfaI CTAG 5 cut(s) 806, 878, 1461, 1619, 1830
BfoI RGCGCY 1 cut(s) 336
BfuI GTATCC 1 cut(s) 1418
BglII AGATCT 1 cut(s) 965
BisI GCNGC 5 cut(s) 19, 846, 934, 1018, 1605
BlpI GCTNAGC 2 cut(s) 1305, 1368
BlsI GCNGC 5 cut(s) 20, 847, 935, 1019, 1606
Bme1390I CCNGG 4 cut(s) 588, 708, 1037, 1436
BmgBI CACGTC 1 cut(s) 218
BmgT120I GGNCC 1 cut(s) 1432
BmiI GGNNCC 3 cut(s) 1132, 1317, 1434
BmrFI CCNGG 4 cut(s) 588, 708, 1037, 1436
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 2 cut(s) 250, 1201
BmtI GCTAGC 1 cut(s) 809
BmuI ACTGGG 1 cut(s) 157
BpiI GAAGAC 2 cut(s) 982, 1529
Bpu10I CCTNAGC 1 cut(s) 1186
Bpu1102I GCTNAGC 2 cut(s) 1305, 1368
BpuEI CTTGAG 2 cut(s) 818, 1408
BpuMI CCSGG 1 cut(s) 1436
BsaAI YACGTR 1 cut(s) 225
BsaI GGTCTC 1 cut(s) 1398
BsaJI CCNNGG 7 cut(s) 307, 481, 586, 883, 925, 1434, 1500
BsaWI WCCGGW 2 cut(s) 191, 575
BsaXI ACNNNNNCTCC 4 cut(s) 761, 791, 1447, 1477
Bsc4I CCNNNNNNNGG 6 cut(s) 326, 392, 855, 1149, 1150, 1709
Bse1I ACTGG 2 cut(s) 163, 1317
Bse3DI GCAATG 3 cut(s) 696, 1154, 1745
BseAI TCCGGA 1 cut(s) 575
BseBI CCWGG 3 cut(s) 588, 708, 1037
BseDI CCNNGG 7 cut(s) 307, 481, 586, 883, 925, 1434, 1500
BseGI GGATG 5 cut(s) 94, 446, 572, 1270, 1333
BseLI CCNNNNNNNGG 6 cut(s) 326, 392, 855, 1149, 1150, 1709
BseMI GCAATG 3 cut(s) 696, 1154, 1745
BseMII CTCAG 5 cut(s) 131, 252, 1200, 1409, 1823
BseNI ACTGG 2 cut(s) 163, 1317
BseXI GCAGC 4 cut(s) 30, 832, 920, 1616
BsgI GTGCAG 2 cut(s) 919, 1061
BshFI GGCC 3 cut(s) 882, 1184, 1433
BshNI GGYRCC 1 cut(s) 1130
BsiSI CCGG 5 cut(s) 192, 576, 780, 1436, 1751
BslFI GGGAC 3 cut(s) 263, 909, 1429
BslI CCNNNNNNNGG 6 cut(s) 326, 392, 855, 1149, 1150, 1709
BsmAI GTCTC 2 cut(s) 793, 1398
BsmFI GGGAC 3 cut(s) 263, 909, 1429
BsnI GGCC 3 cut(s) 882, 1184, 1433
Bso31I GGTCTC 1 cut(s) 1398
Bsp13I TCCGGA 1 cut(s) 575
Bsp143I GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
Bsp1720I GCTNAGC 2 cut(s) 1305, 1368
BspACI CCGC 3 cut(s) 1018, 1319, 1515
BspANI GGCC 3 cut(s) 882, 1184, 1433
BspCNI CTCAG 5 cut(s) 130, 253, 1199, 1408, 1822
BspEI TCCGGA 1 cut(s) 575
BspHI TCATGA 1 cut(s) 1060
BspLI GGNNCC 3 cut(s) 1132, 1317, 1434
BspOI GCTAGC 1 cut(s) 809
BspPI GGATC 5 cut(s) 311, 1310, 1323, 1386, 1772
BspQI GCTCTTC 1 cut(s) 643
BspT107I GGYRCC 1 cut(s) 1130
BspTNI GGTCTC 1 cut(s) 1398
BsrDI GCAATG 3 cut(s) 696, 1154, 1745
BsrI ACTGG 2 cut(s) 163, 1317
BssECI CCNNGG 7 cut(s) 307, 481, 586, 883, 925, 1434, 1500
BssMI GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
BssT1I CCWWGG 5 cut(s) 307, 481, 883, 925, 1500
Bst2UI CCWGG 3 cut(s) 588, 708, 1037
Bst4CI ACNGT 4 cut(s) 149, 377, 940, 1538
Bst6I CTCTTC 2 cut(s) 643, 944
BstBAI YACGTR 1 cut(s) 225
BstC8I GCNNGC 3 cut(s) 270, 807, 1513
BstDEI CTNAG 9 cut(s) 117, 261, 1186, 1281, 1305, 1344, 1368, 1395, 1809
BstF5I GGATG 5 cut(s) 94, 446, 572, 1270, 1333
BstH2I RGCGCY 1 cut(s) 336
BstHHI GCGC 1 cut(s) 335
BstKTI GATC 8 cut(s) 187, 319, 796, 968, 973, 1318, 1381, 1780
BstMAI GTCTC 2 cut(s) 793, 1398
BstMBI GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
BstMWI GCNNNNNNNGC 1 cut(s) 227
BstNI CCWGG 3 cut(s) 588, 708, 1037
BstNSI RCATGY 1 cut(s) 1771
BstSCI CCNGG 4 cut(s) 586, 706, 1035, 1434
BstSNI TACGTA 1 cut(s) 225
BstV1I GCAGC 4 cut(s) 30, 832, 920, 1616
BstV2I GAAGAC 2 cut(s) 982, 1529
BstX2I RGATCY 3 cut(s) 965, 1315, 1378
BstXI CCANNNNNNTGG 1 cut(s) 1127
BstYI RGATCY 3 cut(s) 965, 1315, 1378
BsuI GTATCC 1 cut(s) 1418
BsuRI GGCC 3 cut(s) 882, 1184, 1433
BtrI CACGTC 1 cut(s) 218
BtsCI GGATG 5 cut(s) 94, 446, 572, 1270, 1333
BtsI GCAGTG 1 cut(s) 1226
BtsIMutI CAGTG 1 cut(s) 1226
Cac8I GCNNGC 3 cut(s) 270, 807, 1513
CaiI CAGNNNCTG 1 cut(s) 707
CciI TCATGA 1 cut(s) 1060
CfoI GCGC 1 cut(s) 335
Cfr13I GGNCC 1 cut(s) 1432
CseI GACGC 2 cut(s) 730, 1610
CsiI ACCWGGT 1 cut(s) 1035
Csp6I GTAC 4 cut(s) 24, 1162, 1677, 1845
CspCI CAANNNNNGTGG 2 cut(s) 1389, 1424
CviAII CATG 8 cut(s) 298, 518, 609, 1061, 1205, 1429, 1547, 1768
CviQI GTAC 4 cut(s) 24, 1162, 1677, 1845
DdeI CTNAG 9 cut(s) 117, 261, 1186, 1281, 1305, 1344, 1368, 1395, 1809
DpnI GATC 8 cut(s) 186, 318, 795, 967, 972, 1317, 1380, 1779
DpnII GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
Eam1104I CTCTTC 2 cut(s) 643, 944
EarI CTCTTC 2 cut(s) 643, 944
Eco105I TACGTA 1 cut(s) 225
Eco130I CCWWGG 5 cut(s) 307, 481, 883, 925, 1500
Eco31I GGTCTC 1 cut(s) 1398
Eco32I GATATC 1 cut(s) 1240
Eco57I CTGAAG 3 cut(s) 1258, 1321, 1470
EcoRII CCWGG 3 cut(s) 586, 706, 1035
EcoRV GATATC 1 cut(s) 1240
EcoT14I CCWWGG 5 cut(s) 307, 481, 883, 925, 1500
EcoT22I ATGCAT 3 cut(s) 1093, 1101, 1773
ErhI CCWWGG 5 cut(s) 307, 481, 883, 925, 1500
FaeI CATG 8 cut(s) 301, 521, 612, 1064, 1208, 1432, 1550, 1771
FalI AAGNNNNNCTT 8 cut(s) 668, 700, 794, 826, 941, 973, 1510, 1542
FaqI GGGAC 3 cut(s) 263, 909, 1429
FatI CATG 8 cut(s) 297, 517, 608, 1060, 1204, 1428, 1546, 1767
FauNDI CATATG 2 cut(s) 737, 1762
FbaI TGATCA 1 cut(s) 970
Fnu4HI GCNGC 5 cut(s) 19, 846, 934, 1018, 1605
FokI GGATG 5 cut(s) 81, 433, 559, 1277, 1340
Fsp4HI GCNGC 5 cut(s) 19, 846, 934, 1018, 1605
FspBI CTAG 5 cut(s) 806, 878, 1461, 1619, 1830
GlaI GCGC 1 cut(s) 334
GluI GCNGC 5 cut(s) 19, 846, 934, 1018, 1605
HaeII RGCGCY 1 cut(s) 336
HaeIII GGCC 3 cut(s) 882, 1184, 1433
HapII CCGG 5 cut(s) 192, 576, 780, 1436, 1751
HgaI GACGC 2 cut(s) 730, 1610
HhaI GCGC 1 cut(s) 335
Hin1II CATG 8 cut(s) 301, 521, 612, 1064, 1208, 1432, 1550, 1771
Hin6I GCGC 1 cut(s) 333
HinP1I GCGC 1 cut(s) 333
HincII GTYRAC 3 cut(s) 145, 304, 523
HindII GTYRAC 3 cut(s) 145, 304, 523
HindIII AAGCTT 1 cut(s) 1283
HinfI GANTC 6 cut(s) 263, 535, 912, 954, 1073, 1469
HpaI GTTAAC 1 cut(s) 145
HpaII CCGG 5 cut(s) 192, 576, 780, 1436, 1751
HphI GGTGA 5 cut(s) 181, 1301, 1550, 1673, 1729
Hpy166II GTNNAC 5 cut(s) 26, 145, 304, 523, 1677
Hpy188III TCNNGA 9 cut(s) 174, 542, 576, 685, 797, 894, 1061, 1598, 1781
Hpy8I GTNNAC 5 cut(s) 26, 145, 304, 523, 1677
HpyAV CCTTC 6 cut(s) 115, 146, 171, 867, 1445, 1512
HpyCH4III ACNGT 4 cut(s) 149, 377, 940, 1538
HpyCH4IV ACGT 2 cut(s) 217, 224
HpyF10VI GCNNNNNNNGC 1 cut(s) 227
HpyF3I CTNAG 9 cut(s) 117, 261, 1186, 1281, 1305, 1344, 1368, 1395, 1809
HpySE526I ACGT 2 cut(s) 217, 224
Hsp92II CATG 8 cut(s) 301, 521, 612, 1064, 1208, 1432, 1550, 1771
HspAI GCGC 1 cut(s) 333
Kpn2I TCCGGA 1 cut(s) 575
Ksp22I TGATCA 1 cut(s) 970
KspAI GTTAAC 1 cut(s) 145
Kzo9I GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
LguI GCTCTTC 1 cut(s) 643
LmnI GCTCC 2 cut(s) 330, 367
Lsp1109I GCAGC 4 cut(s) 30, 832, 920, 1616
LweI GCATC 2 cut(s) 250, 1201
MabI ACCWGGT 1 cut(s) 1035
MaeI CTAG 5 cut(s) 806, 878, 1461, 1619, 1830
MaeII ACGT 2 cut(s) 217, 224
MaeIII GTNAC 2 cut(s) 256, 550
MalI GATC 8 cut(s) 186, 318, 795, 967, 972, 1317, 1380, 1779
MboI GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
MflI RGATCY 3 cut(s) 965, 1315, 1378
MlyI GAGTC 1 cut(s) 272
MmeI TCCRAC 3 cut(s) 193, 474, 1645
Mph1103I ATGCAT 3 cut(s) 1093, 1101, 1773
MroI TCCGGA 1 cut(s) 575
MroXI GAANNNNTTC 1 cut(s) 989
MseI TTAA 6 cut(s) 144, 435, 581, 618, 755, 1022
MslI CAYNNNNRTG 1 cut(s) 1209
MspA1I CMGCKG 1 cut(s) 1607
MspI CCGG 5 cut(s) 192, 576, 780, 1436, 1751
MspR9I CCNGG 4 cut(s) 588, 708, 1037, 1436
MvaI CCWGG 3 cut(s) 588, 708, 1037
MwoI GCNNNNNNNGC 1 cut(s) 227
NciI CCSGG 1 cut(s) 1436
NdeI CATATG 2 cut(s) 737, 1762
NdeII GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
NheI GCTAGC 1 cut(s) 805
NlaIII CATG 8 cut(s) 301, 521, 612, 1064, 1208, 1432, 1550, 1771
NlaIV GGNNCC 3 cut(s) 1132, 1317, 1434
NsiI ATGCAT 3 cut(s) 1093, 1101, 1773
NspI RCATGY 1 cut(s) 1771
PagI TCATGA 1 cut(s) 1060
PciSI GCTCTTC 1 cut(s) 643
PcsI WCGNNNNNNNCGW 1 cut(s) 426
PdmI GAANNNNTTC 1 cut(s) 989
PfeI GAWTC 5 cut(s) 535, 912, 954, 1073, 1469
PkrI GCNGC 5 cut(s) 20, 847, 935, 1019, 1606
PleI GAGTC 1 cut(s) 271
PpsI GAGTC 1 cut(s) 271
Ppu21I YACGTR 1 cut(s) 225
Psp6I CCWGG 3 cut(s) 586, 706, 1035
PspGI CCWGG 3 cut(s) 586, 706, 1035
PspN4I GGNNCC 3 cut(s) 1132, 1317, 1434
PspPI GGNCC 1 cut(s) 1432
PstNI CAGNNNCTG 1 cut(s) 707
PsuI RGATCY 3 cut(s) 965, 1315, 1378
PvuII CAGCTG 1 cut(s) 1607
RsaI GTAC 4 cut(s) 25, 1163, 1678, 1846
RsaNI GTAC 4 cut(s) 24, 1162, 1677, 1845
RseI CAYNNNNRTG 1 cut(s) 1209
SapI GCTCTTC 1 cut(s) 643
SaqAI TTAA 6 cut(s) 144, 435, 581, 618, 755, 1022
SatI GCNGC 5 cut(s) 19, 846, 934, 1018, 1605
Sau3AI GATC 8 cut(s) 184, 316, 793, 965, 970, 1315, 1378, 1777
Sau96I GGNCC 1 cut(s) 1432
SchI GAGTC 1 cut(s) 272
ScrFI CCNGG 4 cut(s) 588, 708, 1037, 1436
SexAI ACCWGGT 1 cut(s) 1035
SfaNI GCATC 2 cut(s) 250, 1201
SmiMI CAYNNNNRTG 1 cut(s) 1209
SmlI CTYRAG 2 cut(s) 797, 1387
SmoI CTYRAG 2 cut(s) 797, 1387
SnaBI TACGTA 1 cut(s) 225
SsiI CCGC 3 cut(s) 1018, 1319, 1515
SspI AATATT 2 cut(s) 49, 1594
SspMI CTAG 5 cut(s) 806, 878, 1461, 1619, 1830
StyD4I CCNGG 4 cut(s) 586, 706, 1035, 1434
StyI CCWWGG 5 cut(s) 307, 481, 883, 925, 1500
TaaI ACNGT 4 cut(s) 149, 377, 940, 1538
TaiI ACGT 2 cut(s) 220, 227
TaqI TCGA 4 cut(s) 207, 474, 623, 1030
TaqII GACCGA 1 cut(s) 137
TatI WGTACW 2 cut(s) 23, 1676
TauI GCSGC 1 cut(s) 1020
TfiI GAWTC 5 cut(s) 535, 912, 954, 1073, 1469
Tru1I TTAA 6 cut(s) 144, 435, 581, 618, 755, 1022
Tru9I TTAA 6 cut(s) 144, 435, 581, 618, 755, 1022
TscAI CASTG 1 cut(s) 1226
TseI GCWGC 4 cut(s) 18, 845, 933, 1604
TspRI CASTG 1 cut(s) 1226
XceI RCATGY 1 cut(s) 1771
XcmI CCANNNNNNNNNTGG 2 cut(s) 134, 1560
XmnI GAANNNNTTC 1 cut(s) 989
XspI CTAG 5 cut(s) 806, 878, 1461, 1619, 1830
Zsp2I ATGCAT 3 cut(s) 1093, 1101, 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.