Rmu_ssc0000386.1_g000042

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000386.1
OG0000038
Physical Location & Seq
Reverse (-)
216647 .. 218579
1933 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000386.1_g000042.1.cds

Sequence Viewer

Length: 1875 bp
atgatgtctgaaagcagaagcagcagtacgcaagcaatctgcttcagcaatatttgcttcctaattattttcatcaatttcttctctcactttgctcatccactctccttcaatataaatcagttcgaccggagtgcaaatggagttgtctgtgaaggtgatgccaagccttcatcgggagtgattgatctcaacacaggcacttatttcggtgttggacatgctacgtatgcagagcctttgcacgtatgggacactgctactaggtcactggcagacttcactactcatttcactttcggggtcgaatatggtcctgatgatgaagggtggaaattcagcgatggaattgcctttttccttgctcctgttggctacggtattccacccaactctggcggtggtgaactgggattattcaacaccaccaccaattttaatgccttgtccaggaacaagattgtaagcgtagagttcgactcctggggaaacgacgactgggatccacatccactccggccccatattgggatcaacatcaatgaaatctcttcagttaaatgcgccgattggaatcccagtaacatgaccgggaagattggtaatgcatggataacttataacgctactgccaacgaccttactgtgttttggacattcgaggaaaacacaaacctcgtttttccaggcaatactacttcttcccttacttaccatgttgacttgcgagagattctccccgaaaaggttacaatcggtttttctgcttcatctggattaaaccctggacgaggagccgacagcaaggaaaagaagaaaaaggcattcttgatactggtcattgcagttcctggtttcactttgacgcttggttcagtcatatgttgggttatggtatcaaggaatcggagaaccaattactcaggcgaagtctctgatcttgactggctagcctttccaaaacgatttgcttaccaagaattgtttgctgccaccaacgggtttgcagacgataggaggctaggccaaggagggtcaggacaagtatataaaggactcttcaaagaccttggaggctgcacagttgccgtaaagagaatctttgcaagatctgatcagaaatatgagaaagtcttcatcaatgaagtcaaaatcataagccgcttaatccatcgaaacctggtgcagttcattgggtggtgtcatgaacaaggggaatgcttacttgtttatgcatatatgccaaactccagcctcgacacgcatctatttggcaacagaacaaccctgcaatgggataacaggtacaagatagctatgggattagcctcagcccttcactatctacatgaagatgcagagcagtgtgtacttcatagggatatcaaatcagctaacgtactgttggatgatgacttcagcactaagcttggtgattttggcattgctaaactcgtggatccccgcttgaggtctcagacaagaggggtggtagggacttttggatacatggccccggaatatgctaatgaagggagggctagtaaggaatctgacatgtttagttttggagttgtagccttggaaattgcttgtggaaggaggacttaccaagagggtgaatatcacgtgccactctttaggtgggtttggcggttgttccttgcaggaaatattctggatgcagctgatgaaagattagaaatgaattatgatcgaaatgaaatgaaatgcttgttgattgttggactatggtgtactcaccccaataacaaggaaagacccaaagcagtacaggtgatggaggttattcagcataaagcaccattgccggaacttccatatgacatgcataatgatccagaactgccttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

624

Amino Acids

69.96

Weight (kDa)

5.79

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 621
AciI CCGC 4 cut(s) 399, 1162, 1465, 1654
AclWI GGATC 6 cut(s) 497, 510, 539, 1454, 1467, 1853
AcsI RAATTY 1 cut(s) 335
AcuI CTGAAG 3 cut(s) 28, 537, 1402
AcvI CACGTG 1 cut(s) 1630
AfaI GTAC 6 cut(s) 28, 1307, 1371, 1401, 1759, 1794
AflIII ACRYGT 1 cut(s) 1557
AgsI TTSAA 3 cut(s) 112, 421, 1063
AjnI CCWGG 6 cut(s) 449, 482, 685, 784, 850, 1179
AluBI AGCT 4 cut(s) 1316, 1394, 1429, 1688
AluI AGCT 4 cut(s) 1316, 1394, 1429, 1688
Alw26I GTCTC 2 cut(s) 937, 1479
AlwI GGATC 6 cut(s) 497, 510, 539, 1454, 1467, 1853
AlwNI CAGNNNCTG 1 cut(s) 851
AoxI GGCC 3 cut(s) 518, 1024, 1512
ApeKI GCWGC 4 cut(s) 21, 989, 1077, 1685
ApoI RAATTY 1 cut(s) 335
Asp700I GAANNNNTTC 1 cut(s) 1133
AspLEI GCGC 1 cut(s) 566
AspS9I GGNCC 3 cut(s) 314, 519, 1513
AsuC2I CCSGG 2 cut(s) 592, 1517
AsuHPI GGTGA 6 cut(s) 170, 416, 1445, 1631, 1754, 1810
AsuNHI GCTAGC 1 cut(s) 949
AvaII GGWCC 1 cut(s) 314
BamHI GGATCC 2 cut(s) 502, 1459
BarI GAAGNNNNNNTAC 2 cut(s) 10, 42
BauI CACGAG 1 cut(s) 1454
BbrPI CACGTG 1 cut(s) 1630
BbsI GAAGAC 1 cut(s) 1126
BbvCI CCTCAGC 1 cut(s) 1330
BbvI GCAGC 4 cut(s) 33, 976, 1064, 1697
BccI CCATC 3 cut(s) 338, 1179, 1795
BceAI ACGGC 1 cut(s) 1073
BcgI CGANNNNNNTGC 6 cut(s) 116, 150, 190, 224, 332, 366
BciT130I CCWGG 6 cut(s) 451, 484, 687, 786, 852, 1181
BciVI GTATCC 1 cut(s) 1499
BclI TGATCA 1 cut(s) 1114
BcnI CCSGG 2 cut(s) 592, 1517
BcoDI GTCTC 2 cut(s) 937, 1479
BfaI CTAG 4 cut(s) 264, 950, 1022, 1542
BfuI GTATCC 1 cut(s) 1499
BglII AGATCT 1 cut(s) 1109
BisI GCNGC 5 cut(s) 22, 990, 1078, 1162, 1686
BlsI GCNGC 5 cut(s) 23, 991, 1079, 1163, 1687
Bme1390I CCNGG 8 cut(s) 451, 484, 592, 687, 786, 852, 1181, 1517
Bme18I GGWCC 1 cut(s) 314
BmgT120I GGNCC 3 cut(s) 314, 519, 1513
BmiI GGNNCC 5 cut(s) 504, 521, 796, 1461, 1515
BmrFI CCNGG 8 cut(s) 451, 484, 592, 687, 786, 852, 1181, 1517
BmrI ACTGGG 3 cut(s) 419, 508, 573
BmsI GCATC 4 cut(s) 151, 1273, 1345, 1672
BmtI GCTAGC 1 cut(s) 953
BmuI ACTGGG 3 cut(s) 419, 508, 573
BpiI GAAGAC 1 cut(s) 1126
BplI GAGNNNNNCTC 4 cut(s) 464, 496, 720, 752
BpmI CTGGAG 1 cut(s) 1234
Bpu10I CCTNAGC 1 cut(s) 1330
BpuEI CTTGAG 1 cut(s) 1489
BpuMI CCSGG 2 cut(s) 592, 1517
BsaAI YACGTR 3 cut(s) 228, 247, 1630
BsaBI GATNNNNATC 3 cut(s) 507, 536, 573
BsaI GGTCTC 1 cut(s) 1479
BsaJI CCNNGG 6 cut(s) 483, 784, 1027, 1069, 1515, 1581
BsaWI WCCGGW 1 cut(s) 129
BsaXI ACNNNNNCTCC 4 cut(s) 498, 528, 1528, 1558
Bse1I ACTGG 6 cut(s) 276, 414, 503, 579, 840, 950
Bse3DI GCAATG 4 cut(s) 840, 1298, 1443, 1826
Bse8I GATNNNNATC 3 cut(s) 507, 536, 573
BseBI CCWGG 6 cut(s) 451, 484, 687, 786, 852, 1181
BseDI CCNNGG 6 cut(s) 483, 784, 1027, 1069, 1515, 1581
BseGI GGATG 4 cut(s) 97, 508, 1414, 1687
BseJI GATNNNNATC 3 cut(s) 507, 536, 573
BseMI GCAATG 4 cut(s) 840, 1298, 1443, 1826
BseMII CTCAG 3 cut(s) 936, 1344, 1490
BseNI ACTGG 6 cut(s) 276, 414, 503, 579, 840, 950
BseRI GAGGAG 1 cut(s) 807
BseXI GCAGC 4 cut(s) 33, 976, 1064, 1697
BsgI GTGCAG 2 cut(s) 1063, 1205
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 3 cut(s) 520, 1026, 1514
BsiEI CGRYCG 1 cut(s) 130
BsiSI CCGG 5 cut(s) 130, 517, 591, 1517, 1832
BslFI GGGAC 2 cut(s) 266, 1510
BsmAI GTCTC 2 cut(s) 937, 1479
BsmFI GGGAC 2 cut(s) 266, 1510
BsmI GAATGC 2 cut(s) 824, 1223
BsnI GGCC 3 cut(s) 520, 1026, 1514
Bso31I GGTCTC 1 cut(s) 1479
Bsp143I GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
BspACI CCGC 4 cut(s) 399, 1162, 1465, 1654
BspANI GGCC 3 cut(s) 520, 1026, 1514
BspCNI CTCAG 3 cut(s) 935, 1343, 1489
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 5 cut(s) 504, 521, 796, 1461, 1515
BspOI GCTAGC 1 cut(s) 953
BspPI GGATC 6 cut(s) 497, 510, 539, 1454, 1467, 1853
BspTNI GGTCTC 1 cut(s) 1479
BsrDI GCAATG 4 cut(s) 840, 1298, 1443, 1826
BsrI ACTGG 6 cut(s) 276, 414, 503, 579, 840, 950
BssECI CCNNGG 6 cut(s) 483, 784, 1027, 1069, 1515, 1581
BssMI GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
BssSI CACGAG 1 cut(s) 1454
BssT1I CCWWGG 3 cut(s) 1027, 1069, 1581
Bst2BI CACGAG 1 cut(s) 1454
Bst2UI CCWGG 6 cut(s) 451, 484, 687, 786, 852, 1181
Bst4CI ACNGT 4 cut(s) 380, 646, 1084, 1404
Bst6I CTCTTC 2 cut(s) 556, 1064
BstAPI GCANNNNNTGC 1 cut(s) 54
BstBAI YACGTR 3 cut(s) 228, 247, 1630
BstC8I GCNNGC 2 cut(s) 33, 951
BstDEI CTNAG 4 cut(s) 922, 1330, 1425, 1476
BstENI CCTNNNNNAGG 2 cut(s) 448, 789
BstF5I GGATG 4 cut(s) 97, 508, 1414, 1687
BstHHI GCGC 1 cut(s) 566
BstKTI GATC 9 cut(s) 190, 505, 534, 940, 1112, 1117, 1462, 1717, 1861
BstMAI GTCTC 2 cut(s) 937, 1479
BstMBI GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 3 cut(s) 21, 54, 230
BstNI CCWGG 6 cut(s) 451, 484, 687, 786, 852, 1181
BstNSI RCATGY 3 cut(s) 224, 1561, 1852
BstSCI CCNGG 8 cut(s) 449, 482, 590, 685, 784, 850, 1179, 1515
BstSNI TACGTA 1 cut(s) 228
BstV1I GCAGC 4 cut(s) 33, 976, 1064, 1697
BstV2I GAAGAC 1 cut(s) 1126
BstX2I RGATCY 3 cut(s) 502, 1109, 1459
BstYI RGATCY 3 cut(s) 502, 1109, 1459
BsuI GTATCC 1 cut(s) 1499
BsuRI GGCC 3 cut(s) 520, 1026, 1514
BtgZI GCGATG 1 cut(s) 357
BtsCI GGATG 4 cut(s) 97, 508, 1414, 1687
BtsI GCAGTG 2 cut(s) 255, 1370
BtsIMutI CAGTG 3 cut(s) 255, 269, 1370
Cac8I GCNNGC 2 cut(s) 33, 951
CaiI CAGNNNCTG 1 cut(s) 851
CciI TCATGA 1 cut(s) 1204
CfoI GCGC 1 cut(s) 566
Cfr13I GGNCC 3 cut(s) 314, 519, 1513
CseI GACGC 1 cut(s) 874
CsiI ACCWGGT 1 cut(s) 1179
Csp6I GTAC 6 cut(s) 27, 1306, 1370, 1400, 1758, 1793
CspCI CAANNNNNGTGG 2 cut(s) 1470, 1505
CviAII CATG 9 cut(s) 221, 586, 609, 716, 1205, 1349, 1510, 1558, 1849
CviQI GTAC 6 cut(s) 27, 1306, 1370, 1400, 1758, 1793
DdeI CTNAG 4 cut(s) 922, 1330, 1425, 1476
DpnI GATC 9 cut(s) 189, 504, 533, 939, 1111, 1116, 1461, 1716, 1860
DpnII GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
Eam1104I CTCTTC 2 cut(s) 556, 1064
EarI CTCTTC 2 cut(s) 556, 1064
Eco105I TACGTA 1 cut(s) 228
Eco130I CCWWGG 3 cut(s) 1027, 1069, 1581
Eco31I GGTCTC 1 cut(s) 1479
Eco32I GATATC 1 cut(s) 1384
Eco47I GGWCC 1 cut(s) 314
Eco57I CTGAAG 3 cut(s) 28, 537, 1402
Eco72I CACGTG 1 cut(s) 1630
EcoNI CCTNNNNNAGG 2 cut(s) 448, 789
EcoRII CCWGG 6 cut(s) 449, 482, 685, 784, 850, 1179
EcoRV GATATC 1 cut(s) 1384
EcoT14I CCWWGG 3 cut(s) 1027, 1069, 1581
EcoT22I ATGCAT 3 cut(s) 610, 1237, 1854
ErhI CCWWGG 3 cut(s) 1027, 1069, 1581
FaeI CATG 9 cut(s) 224, 589, 612, 719, 1208, 1352, 1513, 1561, 1852
FalI AAGNNNNNCTT 6 cut(s) 812, 844, 1085, 1117, 1591, 1623
FaqI GGGAC 2 cut(s) 266, 1510
FatI CATG 9 cut(s) 220, 585, 608, 715, 1204, 1348, 1509, 1557, 1848
FauI CCCGC 1 cut(s) 1472
FauNDI CATATG 2 cut(s) 881, 1843
FbaI TGATCA 1 cut(s) 1114
Fnu4HI GCNGC 5 cut(s) 22, 990, 1078, 1162, 1686
FokI GGATG 4 cut(s) 84, 495, 1421, 1694
Fsp4HI GCNGC 5 cut(s) 22, 990, 1078, 1162, 1686
FspBI CTAG 4 cut(s) 264, 950, 1022, 1542
GlaI GCGC 1 cut(s) 565
GluI GCNGC 5 cut(s) 22, 990, 1078, 1162, 1686
GsuI CTGGAG 1 cut(s) 1234
HaeIII GGCC 3 cut(s) 520, 1026, 1514
HapII CCGG 5 cut(s) 130, 517, 591, 1517, 1832
HgaI GACGC 1 cut(s) 874
HhaI GCGC 1 cut(s) 566
Hin1II CATG 9 cut(s) 224, 589, 612, 719, 1208, 1352, 1513, 1561, 1852
Hin6I GCGC 1 cut(s) 564
HinP1I GCGC 1 cut(s) 564
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HindIII AAGCTT 1 cut(s) 1427
HinfI GANTC 7 cut(s) 479, 574, 733, 904, 1056, 1098, 1550
HpaII CCGG 5 cut(s) 130, 517, 591, 1517, 1832
HphI GGTGA 6 cut(s) 170, 416, 1445, 1631, 1754, 1810
Hpy166II GTNNAC 4 cut(s) 407, 721, 1370, 1758
Hpy188I TCNGA 7 cut(s) 10, 909, 937, 1114, 1119, 1479, 1555
Hpy188III TCNNGA 9 cut(s) 177, 317, 774, 829, 941, 1038, 1205, 1679, 1862
Hpy8I GTNNAC 4 cut(s) 407, 721, 1370, 1758
Hpy99I CGWCG 1 cut(s) 497
HpyAV CCTTC 7 cut(s) 118, 149, 180, 320, 1346, 1526, 1593
HpyCH4III ACNGT 4 cut(s) 380, 646, 1084, 1404
HpyCH4IV ACGT 4 cut(s) 227, 246, 1398, 1629
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 54, 230
HpyF3I CTNAG 4 cut(s) 922, 1330, 1425, 1476
HpySE526I ACGT 4 cut(s) 227, 246, 1398, 1629
Hsp92II CATG 9 cut(s) 224, 589, 612, 719, 1208, 1352, 1513, 1561, 1852
HspAI GCGC 1 cut(s) 564
Ksp22I TGATCA 1 cut(s) 1114
Kzo9I GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
LmnI GCTCC 2 cut(s) 370, 794
Lsp1109I GCAGC 4 cut(s) 33, 976, 1064, 1697
LweI GCATC 4 cut(s) 151, 1273, 1345, 1672
MabI ACCWGGT 1 cut(s) 1179
MaeI CTAG 4 cut(s) 264, 950, 1022, 1542
MaeII ACGT 4 cut(s) 227, 246, 1398, 1629
MaeIII GTNAC 3 cut(s) 267, 581, 748
MalI GATC 9 cut(s) 189, 504, 533, 939, 1111, 1116, 1461, 1716, 1860
MboI GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
MboII GAAGA 8 cut(s) 73, 543, 607, 693, 826, 1051, 1126, 1364
MflI RGATCY 3 cut(s) 502, 1109, 1459
MluCI AATT 9 cut(s) 63, 76, 335, 348, 433, 916, 980, 1587, 1708
MlyI GAGTC 2 cut(s) 473, 1050
MmeI TCCRAC 3 cut(s) 196, 1386, 1726
Mph1103I ATGCAT 3 cut(s) 610, 1237, 1854
MroXI GAANNNNTTC 1 cut(s) 1133
MseI TTAA 5 cut(s) 438, 558, 779, 1166, 1873
MslI CAYNNNNRTG 1 cut(s) 1353
MspA1I CMGCKG 1 cut(s) 1688
MspI CCGG 5 cut(s) 130, 517, 591, 1517, 1832
MspR9I CCNGG 8 cut(s) 451, 484, 592, 687, 786, 852, 1181, 1517
Mva1269I GAATGC 2 cut(s) 824, 1223
MvaI CCWGG 6 cut(s) 451, 484, 687, 786, 852, 1181
MwoI GCNNNNNNNGC 3 cut(s) 21, 54, 230
NciI CCSGG 2 cut(s) 592, 1517
NdeI CATATG 2 cut(s) 881, 1843
NdeII GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
NheI GCTAGC 1 cut(s) 949
NlaIII CATG 9 cut(s) 224, 589, 612, 719, 1208, 1352, 1513, 1561, 1852
NlaIV GGNNCC 5 cut(s) 504, 521, 796, 1461, 1515
NmuCI GTSAC 1 cut(s) 267
NsiI ATGCAT 3 cut(s) 610, 1237, 1854
NspI RCATGY 3 cut(s) 224, 1561, 1852
PagI TCATGA 1 cut(s) 1204
PciI ACATGT 1 cut(s) 1557
PctI GAATGC 2 cut(s) 824, 1223
PdmI GAANNNNTTC 1 cut(s) 1133
PfeI GAWTC 5 cut(s) 574, 733, 904, 1098, 1550
PfoI TCCNGGA 1 cut(s) 449
PkrI GCNGC 5 cut(s) 23, 991, 1079, 1163, 1687
PleI GAGTC 2 cut(s) 473, 1050
PmaCI CACGTG 1 cut(s) 1630
PmlI CACGTG 1 cut(s) 1630
PpsI GAGTC 2 cut(s) 473, 1050
Ppu21I YACGTR 3 cut(s) 228, 247, 1630
PscI ACATGT 1 cut(s) 1557
PsiI TTATAA 1 cut(s) 621
Psp6I CCWGG 6 cut(s) 449, 482, 685, 784, 850, 1179
PspCI CACGTG 1 cut(s) 1630
PspGI CCWGG 6 cut(s) 449, 482, 685, 784, 850, 1179
PspN4I GGNNCC 5 cut(s) 504, 521, 796, 1461, 1515
PspPI GGNCC 3 cut(s) 314, 519, 1513
PstNI CAGNNNCTG 1 cut(s) 851
PsuI RGATCY 3 cut(s) 502, 1109, 1459
PvuII CAGCTG 1 cut(s) 1688
RsaI GTAC 6 cut(s) 28, 1307, 1371, 1401, 1759, 1794
RsaNI GTAC 6 cut(s) 27, 1306, 1370, 1400, 1758, 1793
RseI CAYNNNNRTG 1 cut(s) 1353
SaqAI TTAA 5 cut(s) 438, 558, 779, 1166, 1873
SatI GCNGC 5 cut(s) 22, 990, 1078, 1162, 1686
Sau3AI GATC 9 cut(s) 187, 502, 531, 937, 1109, 1114, 1459, 1714, 1858
Sau96I GGNCC 3 cut(s) 314, 519, 1513
SchI GAGTC 2 cut(s) 473, 1050
ScrFI CCNGG 8 cut(s) 451, 484, 592, 687, 786, 852, 1181, 1517
SexAI ACCWGGT 1 cut(s) 1179
SfaNI GCATC 4 cut(s) 151, 1273, 1345, 1672
SinI GGWCC 1 cut(s) 314
SmiMI CAYNNNNRTG 1 cut(s) 1353
SmlI CTYRAG 1 cut(s) 1468
SmoI CTYRAG 1 cut(s) 1468
SnaBI TACGTA 1 cut(s) 228
Sse9I AATT 9 cut(s) 63, 76, 335, 348, 433, 916, 980, 1587, 1708
SsiI CCGC 4 cut(s) 399, 1162, 1465, 1654
SspI AATATT 2 cut(s) 52, 1675
SspMI CTAG 4 cut(s) 264, 950, 1022, 1542
StyD4I CCNGG 8 cut(s) 449, 482, 590, 685, 784, 850, 1179, 1515
StyI CCWWGG 3 cut(s) 1027, 1069, 1581
TaaI ACNGT 4 cut(s) 380, 646, 1084, 1404
TaiI ACGT 4 cut(s) 230, 249, 1401, 1632
TaqI TCGA 7 cut(s) 126, 306, 477, 660, 1174, 1257, 1717
TasI AATT 9 cut(s) 63, 76, 335, 348, 433, 916, 980, 1587, 1708
TatI WGTACW 3 cut(s) 1369, 1757, 1792
TauI GCSGC 1 cut(s) 1164
TfiI GAWTC 5 cut(s) 574, 733, 904, 1098, 1550
Tru1I TTAA 5 cut(s) 438, 558, 779, 1166, 1873
Tru9I TTAA 5 cut(s) 438, 558, 779, 1166, 1873
TscAI CASTG 3 cut(s) 262, 276, 1370
TseFI GTSAC 1 cut(s) 267
TseI GCWGC 4 cut(s) 21, 989, 1077, 1685
Tsp45I GTSAC 1 cut(s) 267
TspRI CASTG 3 cut(s) 262, 276, 1370
VpaK11BI GGWCC 1 cut(s) 314
XagI CCTNNNNNAGG 2 cut(s) 448, 789
XapI RAATTY 1 cut(s) 335
XceI RCATGY 3 cut(s) 224, 1561, 1852
XcmI CCANNNNNNNNNTGG 1 cut(s) 1641
XmnI GAANNNNTTC 1 cut(s) 1133
XspI CTAG 4 cut(s) 264, 950, 1022, 1542
Zsp2I ATGCAT 3 cut(s) 610, 1237, 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.