RchiOBHm_Chr1g0357251

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
49670113 .. 49672122
2010 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58255

Sequence Viewer

Length: 1965 bp
ATGAAGGCTTCATCATTGCAAGCACTCATCATTTCTTGCTTGACTGAAGTTATGATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTCTGTAATATTTGCTTCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAATATAACTCAGTTCGACCAGAGTACAAAAGGAGTTGGCTTTGAAGGTGCTGCCCAGTTTTCATCGGGAAGGATTGAGCTCAACCCAGGCACTTGTTACGAGACTGGACGAGCTATTTATGCAGAGCCTTTGCATCTATGGGACAATGTTACTGGGTCGCTGGCAGACTTCACTACTCATTTCACTTTCATGGTCAACCTTGGTTCTGCTCCCAAAGATGGGAGTGCCACTGATGGAATTGCCTTTTTCCTTGCTCCTGTTGGTTACGGTATTCCACCCAACTCCGCTGCTTGTCATCTGGGATTATTCAACTCCACCAACGAATTTAATGCCTTGTCCAACCAGATTGTAGCCGTAGAGTTCGACACCTGTGGAAACGGTGATTGGGATACTGACGAGCCGCATGTTGGGATAGACATCAATAAAATCTCTTCGGTTACGTCCACCAATTGGAATACCAGTAACATCATCGGGAAGACAGGTAATGCAAGGATAATTTACAACGCTACTACCAAGAACCTTTCTGTGTTTTGGACATTCGAGGAAAACACAAACCTCGTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCTAGAGATTCTCCCCGAAAGGGTTACAATCGGTTTTTCTGCTTCATCTGGAATATCAAACCCTGGACGGTTTTCTTTAAATTCATGGGCGTTTAATTCGACTTTGGTGGATAGTGATATTAGAGGAGCCGACAGCAAGGAAAAGAAGAAAAAGATATTCTTGATACTGGTCATTGCAGTTCCTGGTTTCACTTTGACGCTTGGTTCAGTCATATGTTGGTTGATGGTATTAAGGAATCGGAGAAACAATCACTCCACTGAAGTCTCTGATCTTGAGTGGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTTCAGACGATAGAAGGCTAGGCCAAGGAGGCTCGGGACAAGTATATAAAGGACTCCTACAAGACCATGGAGGCTGCACTGTTGCCGTGAAGAGAATCTTTGCAAGATCTGATCAGCAAGATGAGAGAGTCTCCATCAATGAAGTCAAAATCATCAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTCGACACGCATCTATTTGGCAACAGAACAACCCTGCAATGGGACAACAGGTACAAGATAGCTTTGGGCTTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCACTGTGTACTTCATAGGGATATCAAACCAGCTAACGTACTGTTGAATGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATCGCTAAGCTTGTGGATGCCCGCTTGAGGTCTCAAACAACAAAGTTGGTAGGGACTTTTGGATACATGGCCCCGGAATATGCTACTGAAGGGAGGGCTAGTAAGGAATCTGACATGTATAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAAGACTTACCAAGACGGTAAAGATCACGTGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGGAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAATTACAAGGAAAGACCCAAAGCAGGACAGGTGATGGAGGTTCTTCAGTATAAAGCACCATTGCCGGAACTTCAATATGACATGCATGCTGATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

654

Amino Acids

72.88

Weight (kDa)

5.83

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 52 - 293 2.8e-61 Legume lectin domain
Pkinase PF00069 369 - 634 1.5e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 371 - 574 1.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 612
AciI CCGC 4 cut(s) 447, 563, 1261, 1564
AclWI GGATC 1 cut(s) 1952
AcsI RAATTY 2 cut(s) 485, 847
AcuI CTGAAG 5 cut(s) 66, 1047, 1501, 1650, 1895
AcvI CACGTG 1 cut(s) 1729
AfaI GTAC 6 cut(s) 79, 187, 1406, 1470, 1500, 1858
AflIII ACRYGT 1 cut(s) 1656
AgsI TTSAA 5 cut(s) 163, 206, 472, 1507, 1940
AjnI CCWGG 5 cut(s) 247, 727, 829, 949, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 529, 561
AluBI AGCT 7 cut(s) 241, 275, 1415, 1493, 1528, 1552, 1787
AluI AGCT 7 cut(s) 241, 275, 1415, 1493, 1528, 1552, 1787
Alw21I GWGCWC 2 cut(s) 243, 1464
Alw26I GTCTC 4 cut(s) 257, 1036, 1237, 1578
AlwI GGATC 1 cut(s) 1952
AlwNI CAGNNNCTG 1 cut(s) 950
Ama87I CYCGRG 1 cut(s) 1135
AoxI GGCC 3 cut(s) 1123, 1425, 1611
ApeKI GCWGC 6 cut(s) 72, 212, 449, 1088, 1176, 1784
ApoI RAATTY 2 cut(s) 485, 847
AspS9I GGNCC 1 cut(s) 1612
AsuC2I CCSGG 1 cut(s) 1616
AsuHPI GGTGA 4 cut(s) 554, 1544, 1853, 1909
AsuNHI GCTAGC 1 cut(s) 1048
AvaI CYCGRG 1 cut(s) 1135
BanII GRGCYC 1 cut(s) 243
BarI GAAGNNNNNNTAC 2 cut(s) 61, 93
BbrPI CACGTG 1 cut(s) 1729
BbsI GAAGAC 2 cut(s) 644, 1709
Bbv12I GWGCWC 2 cut(s) 243, 1464
BbvCI CCTCAGC 1 cut(s) 1429
BbvI GCAGC 6 cut(s) 84, 199, 436, 1075, 1163, 1796
BccI CCATC 6 cut(s) 374, 389, 985, 1244, 1278, 1894
BceAI ACGGC 2 cut(s) 500, 1172
BcgI CGANNNNNNTGC 2 cut(s) 473, 507
BciT130I CCWGG 5 cut(s) 249, 729, 831, 951, 1280
BciVI GTATCC 2 cut(s) 544, 1598
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 1616
BcoDI GTCTC 4 cut(s) 257, 1036, 1237, 1578
BfaI CTAG 4 cut(s) 770, 1049, 1121, 1641
BfuI GTATCC 2 cut(s) 544, 1598
BglI GCCNNNNNGGC 1 cut(s) 1131
BglII AGATCT 1 cut(s) 1208
BisI GCNGC 8 cut(s) 73, 213, 450, 563, 1089, 1177, 1261, 1785
BlpI GCTNAGC 1 cut(s) 1548
BlsI GCNGC 8 cut(s) 74, 214, 451, 564, 1090, 1178, 1262, 1786
Bme1390I CCNGG 6 cut(s) 249, 729, 831, 951, 1280, 1616
BmeT110I CYCGRG 1 cut(s) 1135
BmgT120I GGNCC 1 cut(s) 1612
BmiI GGNNCC 2 cut(s) 895, 1614
BmrFI CCNGG 6 cut(s) 249, 729, 831, 951, 1280, 1616
BmrI ACTGGG 2 cut(s) 211, 324
BmsI GCATC 4 cut(s) 304, 1372, 1444, 1549
BmtI GCTAGC 1 cut(s) 1052
BmuI ACTGGG 2 cut(s) 211, 324
BpiI GAAGAC 2 cut(s) 644, 1709
BplI GAGNNNNNCTC 2 cut(s) 1217, 1249
Bpu10I CCTNAGC 1 cut(s) 1429
Bpu1102I GCTNAGC 1 cut(s) 1548
BpuEI CTTGAG 2 cut(s) 1061, 1588
BpuMI CCSGG 1 cut(s) 1616
BsaAI YACGTR 1 cut(s) 1729
BsaBI GATNNNNATC 1 cut(s) 578
BsaI GGTCTC 1 cut(s) 1578
BsaJI CCNNGG 8 cut(s) 247, 361, 829, 1126, 1168, 1614, 1680, 1762
BsaXI ACNNNNNCTCC 4 cut(s) 1004, 1034, 1627, 1657
Bse1I ACTGG 5 cut(s) 217, 271, 319, 621, 939
Bse3DI GCAATG 4 cut(s) 14, 939, 1397, 1925
Bse8I GATNNNNATC 1 cut(s) 578
BseBI CCWGG 5 cut(s) 249, 729, 831, 951, 1280
BseDI CCNNGG 8 cut(s) 247, 361, 829, 1126, 1168, 1614, 1680, 1762
BseGI GGATG 2 cut(s) 148, 1564
BseJI GATNNNNATC 1 cut(s) 578
BseMI GCAATG 4 cut(s) 14, 939, 1397, 1925
BseMII CTCAG 2 cut(s) 185, 1443
BseNI ACTGG 5 cut(s) 217, 271, 319, 621, 939
BseRI GAGGAG 1 cut(s) 906
BseXI GCAGC 6 cut(s) 84, 199, 436, 1075, 1163, 1796
BsgI GTGCAG 2 cut(s) 1162, 1304
BshFI GGCC 3 cut(s) 1125, 1427, 1613
BsiHKAI GWGCWC 2 cut(s) 243, 1464
BsiHKCI CYCGRG 1 cut(s) 1135
BsiSI CCGG 2 cut(s) 1616, 1931
BslFI GGGAC 4 cut(s) 317, 1152, 1409, 1609
BsmAI GTCTC 4 cut(s) 257, 1036, 1237, 1578
BsmFI GGGAC 4 cut(s) 317, 1152, 1409, 1609
BsmI GAATGC 1 cut(s) 1322
BsnI GGCC 3 cut(s) 1125, 1427, 1613
Bso31I GGTCTC 1 cut(s) 1578
BsoBI CYCGRG 1 cut(s) 1135
Bsp1286I GDGCHC 2 cut(s) 243, 1464
Bsp143I GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
Bsp1720I GCTNAGC 1 cut(s) 1548
Bsp19I CCATGG 1 cut(s) 1168
BspACI CCGC 4 cut(s) 447, 563, 1261, 1564
BspANI GGCC 3 cut(s) 1125, 1427, 1613
BspCNI CTCAG 2 cut(s) 184, 1442
BspHI TCATGA 1 cut(s) 1303
BspLI GGNNCC 2 cut(s) 895, 1614
BspOI GCTAGC 1 cut(s) 1052
BspPI GGATC 1 cut(s) 1952
BspTNI GGTCTC 1 cut(s) 1578
BsrDI GCAATG 4 cut(s) 14, 939, 1397, 1925
BsrI ACTGG 5 cut(s) 217, 271, 319, 621, 939
BssECI CCNNGG 8 cut(s) 247, 361, 829, 1126, 1168, 1614, 1680, 1762
BssMI GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
BssT1I CCWWGG 5 cut(s) 361, 1126, 1168, 1680, 1762
Bst2UI CCWGG 5 cut(s) 249, 729, 831, 951, 1280
Bst4CI ACNGT 7 cut(s) 431, 542, 837, 1183, 1466, 1503, 1718
Bst6I CTCTTC 2 cut(s) 598, 1187
BstBAI YACGTR 1 cut(s) 1729
BstC8I GCNNGC 6 cut(s) 21, 84, 324, 1050, 1564, 1953
BstDEI CTNAG 4 cut(s) 171, 1429, 1524, 1548
BstDSI CCRYGG 1 cut(s) 1168
BstF5I GGATG 2 cut(s) 148, 1564
BstKTI GATC 6 cut(s) 1039, 1211, 1216, 1726, 1816, 1960
BstMAI GTCTC 4 cut(s) 257, 1036, 1237, 1578
BstMBI GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
BstMWI GCNNNNNNNGC 3 cut(s) 72, 281, 1131
BstNI CCWGG 5 cut(s) 249, 729, 831, 951, 1280
BstNSI RCATGY 4 cut(s) 569, 1660, 1951, 1955
BstSCI CCNGG 6 cut(s) 247, 727, 829, 949, 1278, 1614
BstV1I GCAGC 6 cut(s) 84, 199, 436, 1075, 1163, 1796
BstV2I GAAGAC 2 cut(s) 644, 1709
BstX2I RGATCY 1 cut(s) 1208
BstYI RGATCY 1 cut(s) 1208
BsuI GTATCC 2 cut(s) 544, 1598
BsuRI GGCC 3 cut(s) 1125, 1427, 1613
BtgI CCRYGG 1 cut(s) 1168
BtsCI GGATG 2 cut(s) 148, 1564
BtsIMutI CAGTG 4 cut(s) 390, 1023, 1179, 1462
Cac8I GCNNGC 6 cut(s) 21, 84, 324, 1050, 1564, 1953
CaiI CAGNNNCTG 1 cut(s) 950
CciI TCATGA 1 cut(s) 1303
Cfr13I GGNCC 1 cut(s) 1612
CseI GACGC 2 cut(s) 973, 1790
CsiI ACCWGGT 1 cut(s) 1278
Csp6I GTAC 6 cut(s) 78, 186, 1405, 1469, 1499, 1857
CviQI GTAC 6 cut(s) 78, 186, 1405, 1469, 1499, 1857
DdeI CTNAG 4 cut(s) 171, 1429, 1524, 1548
DpnI GATC 6 cut(s) 1038, 1210, 1215, 1725, 1815, 1959
DpnII GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
DraI TTTAAA 1 cut(s) 846
Eam1104I CTCTTC 2 cut(s) 598, 1187
EarI CTCTTC 2 cut(s) 598, 1187
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 5 cut(s) 361, 1126, 1168, 1680, 1762
Eco24I GRGCYC 1 cut(s) 243
Eco31I GGTCTC 1 cut(s) 1578
Eco32I GATATC 1 cut(s) 1483
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 5 cut(s) 66, 1047, 1501, 1650, 1895
Eco72I CACGTG 1 cut(s) 1729
Eco88I CYCGRG 1 cut(s) 1135
EcoICRI GAGCTC 1 cut(s) 241
EcoRII CCWGG 5 cut(s) 247, 727, 829, 949, 1278
EcoRV GATATC 1 cut(s) 1483
EcoT14I CCWWGG 5 cut(s) 361, 1126, 1168, 1680, 1762
EcoT22I ATGCAT 2 cut(s) 1336, 1953
EcoT38I GRGCYC 1 cut(s) 243
ErhI CCWWGG 5 cut(s) 361, 1126, 1168, 1680, 1762
FalI AAGNNNNNCTT 6 cut(s) 911, 943, 1184, 1216, 1690, 1722
FaqI GGGAC 4 cut(s) 317, 1152, 1409, 1609
FauI CCCGC 1 cut(s) 1571
FauNDI CATATG 1 cut(s) 980
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 8 cut(s) 73, 213, 450, 563, 1089, 1177, 1261, 1785
FokI GGATG 2 cut(s) 135, 1571
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 8 cut(s) 73, 213, 450, 563, 1089, 1177, 1261, 1785
FspBI CTAG 4 cut(s) 770, 1049, 1121, 1641
GluI GCNGC 8 cut(s) 73, 213, 450, 563, 1089, 1177, 1261, 1785
HaeIII GGCC 3 cut(s) 1125, 1427, 1613
HapII CCGG 2 cut(s) 1616, 1931
HgaI GACGC 2 cut(s) 973, 1790
HincII GTYRAC 2 cut(s) 358, 763
HindII GTYRAC 2 cut(s) 358, 763
HindIII AAGCTT 2 cut(s) 1526, 1550
HinfI GANTC 6 cut(s) 775, 1003, 1155, 1197, 1230, 1649
HpaII CCGG 2 cut(s) 1616, 1931
HphI GGTGA 4 cut(s) 554, 1544, 1853, 1909
Hpy166II GTNNAC 5 cut(s) 358, 606, 763, 1469, 1857
Hpy188I TCNGA 6 cut(s) 61, 1008, 1036, 1108, 1213, 1654
Hpy188III TCNNGA 8 cut(s) 228, 634, 816, 928, 1040, 1137, 1304, 1778
Hpy8I GTNNAC 5 cut(s) 358, 606, 763, 1469, 1857
HpyAV CCTTC 7 cut(s) 169, 200, 225, 1110, 1445, 1625, 1692
HpyCH4III ACNGT 7 cut(s) 431, 542, 837, 1183, 1466, 1503, 1718
HpyCH4IV ACGT 3 cut(s) 602, 1497, 1728
HpyF10VI GCNNNNNNNGC 3 cut(s) 72, 281, 1131
HpyF3I CTNAG 4 cut(s) 171, 1429, 1524, 1548
HpySE526I ACGT 3 cut(s) 602, 1497, 1728
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
LmnI GCTCC 3 cut(s) 376, 421, 893
Lsp1109I GCAGC 6 cut(s) 84, 199, 436, 1075, 1163, 1796
LweI GCATC 4 cut(s) 304, 1372, 1444, 1549
MabI ACCWGGT 1 cut(s) 1278
MaeI CTAG 4 cut(s) 770, 1049, 1121, 1641
MaeII ACGT 3 cut(s) 602, 1497, 1728
MaeIII GTNAC 6 cut(s) 257, 310, 425, 598, 623, 790
MalI GATC 6 cut(s) 1038, 1210, 1215, 1725, 1815, 1959
MboI GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
MboII GAAGA 9 cut(s) 124, 585, 649, 735, 925, 1204, 1463, 1714, 1901
MfeI CAATTG 1 cut(s) 610
MflI RGATCY 1 cut(s) 1208
MhlI GDGCHC 2 cut(s) 243, 1464
MlyI GAGTC 2 cut(s) 1149, 1239
MmeI TCCRAC 2 cut(s) 525, 1825
Mph1103I ATGCAT 2 cut(s) 1336, 1953
MseI TTAA 5 cut(s) 489, 845, 861, 998, 1265
MslI CAYNNNNRTG 2 cut(s) 350, 1452
MspA1I CMGCKG 2 cut(s) 449, 1787
MspI CCGG 2 cut(s) 1616, 1931
MspR9I CCNGG 6 cut(s) 249, 729, 831, 951, 1280, 1616
MunI CAATTG 1 cut(s) 610
Mva1269I GAATGC 1 cut(s) 1322
MvaI CCWGG 5 cut(s) 249, 729, 831, 951, 1280
MwoI GCNNNNNNNGC 3 cut(s) 72, 281, 1131
NciI CCSGG 1 cut(s) 1616
NcoI CCATGG 1 cut(s) 1168
NdeI CATATG 1 cut(s) 980
NdeII GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
NheI GCTAGC 1 cut(s) 1048
NlaIV GGNNCC 2 cut(s) 895, 1614
NsiI ATGCAT 2 cut(s) 1336, 1953
NspI RCATGY 4 cut(s) 569, 1660, 1951, 1955
PaeI GCATGC 1 cut(s) 1955
PagI TCATGA 1 cut(s) 1303
PciI ACATGT 1 cut(s) 1656
PctI GAATGC 1 cut(s) 1322
PfeI GAWTC 4 cut(s) 775, 1003, 1197, 1649
PflMI CCANNNNNTGG 1 cut(s) 612
PkrI GCNGC 8 cut(s) 74, 214, 451, 564, 1090, 1178, 1262, 1786
PleI GAGTC 2 cut(s) 1149, 1238
PmaCI CACGTG 1 cut(s) 1729
PmlI CACGTG 1 cut(s) 1729
PpsI GAGTC 2 cut(s) 1149, 1238
Ppu21I YACGTR 1 cut(s) 1729
PscI ACATGT 1 cut(s) 1656
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 5 cut(s) 247, 727, 829, 949, 1278
PspCI CACGTG 1 cut(s) 1729
PspGI CCWGG 5 cut(s) 247, 727, 829, 949, 1278
PspN4I GGNNCC 2 cut(s) 895, 1614
PspPI GGNCC 1 cut(s) 1612
PstNI CAGNNNCTG 1 cut(s) 950
PsuI RGATCY 1 cut(s) 1208
PvuII CAGCTG 1 cut(s) 1787
RsaI GTAC 6 cut(s) 79, 187, 1406, 1470, 1500, 1858
RsaNI GTAC 6 cut(s) 78, 186, 1405, 1469, 1499, 1857
RseI CAYNNNNRTG 2 cut(s) 350, 1452
SacI GAGCTC 1 cut(s) 243
SaqAI TTAA 5 cut(s) 489, 845, 861, 998, 1265
SatI GCNGC 8 cut(s) 73, 213, 450, 563, 1089, 1177, 1261, 1785
Sau3AI GATC 6 cut(s) 1036, 1208, 1213, 1723, 1813, 1957
Sau96I GGNCC 1 cut(s) 1612
SchI GAGTC 2 cut(s) 1149, 1239
ScrFI CCNGG 6 cut(s) 249, 729, 831, 951, 1280, 1616
SduI GDGCHC 2 cut(s) 243, 1464
SexAI ACCWGGT 1 cut(s) 1278
SfaNI GCATC 4 cut(s) 304, 1372, 1444, 1549
SmiMI CAYNNNNRTG 2 cut(s) 350, 1452
SmlI CTYRAG 2 cut(s) 1040, 1567
SmoI CTYRAG 2 cut(s) 1040, 1567
SphI GCATGC 1 cut(s) 1955
SsiI CCGC 4 cut(s) 447, 563, 1261, 1564
SspI AATATT 2 cut(s) 103, 1774
SspMI CTAG 4 cut(s) 770, 1049, 1121, 1641
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 6 cut(s) 247, 727, 829, 949, 1278, 1614
StyI CCWWGG 5 cut(s) 361, 1126, 1168, 1680, 1762
TaaI ACNGT 7 cut(s) 431, 542, 837, 1183, 1466, 1503, 1718
TaiI ACGT 3 cut(s) 605, 1500, 1731
TaqI TCGA 7 cut(s) 177, 525, 702, 866, 1273, 1356, 1816
TatI WGTACW 3 cut(s) 185, 1468, 1856
TauI GCSGC 2 cut(s) 565, 1263
TfiI GAWTC 4 cut(s) 775, 1003, 1197, 1649
Tru1I TTAA 5 cut(s) 489, 845, 861, 998, 1265
Tru9I TTAA 5 cut(s) 489, 845, 861, 998, 1265
TscAI CASTG 4 cut(s) 397, 1030, 1186, 1469
TseI GCWGC 6 cut(s) 72, 212, 449, 1088, 1176, 1784
TspRI CASTG 4 cut(s) 397, 1030, 1186, 1469
Van91I CCANNNNNTGG 1 cut(s) 612
XapI RAATTY 2 cut(s) 485, 847
XceI RCATGY 4 cut(s) 569, 1660, 1951, 1955
XcmI CCANNNNNNNNNTGG 1 cut(s) 1740
XspI CTAG 4 cut(s) 770, 1049, 1121, 1641
Zsp2I ATGCAT 2 cut(s) 1336, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.