Rh5CG252800

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26702053 .. 26703001
949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG252800.1

Sequence Viewer

Length: 858 bp
ATGGAGGGAGATGCTTTGCTCGATGGGGCCCTCCGCCTCACCAAAAGTACCGTCGACTTTCAAAAGTACCAAAGCGTCGGCCGAGCGACCTATCACCAACCCTTCCTCCTCCGCCAAAAATCCACCGGAAAACTCGCTGATTTTACATCAAGTTTCAAGTTCGCCATTGACTCCGGCAACAGCACCTCCTACGGTGATGGGCTGGCCTTCTTCATAGCGCCGGCCGGGTCCTCACTGAACTCCAGATTAGGGGAAGGTAGAAGTCTTGGCCTCCCTGTCAACACTACGCTGGAAAACTATACCATGTGGACTACTGAATACCCGTTTTTGGCGGTCGAGTTTGATATCTTCCCCAATATTATCGTTGATTGGGGTGTAAATTACACTCATGTGGGCATCGACATCAACTCCGTCAGGTCTAAAGTTACCGAGCCATGGACTGGTGGTATTATGACAGGGAATGAAAATAATGCCACAGTTACTTACAACTCCACCTCGAAAAATCTTGGTGTTGCCTTCACTACGTTTGAAAACGAAGTCCAGGTGATCAAAAATTTTTATTTCTCAGTTGATCTGCTCCAATACTTGCCCGATAGGGTCATCGTTGGTTTCTCGGCAGCAACAGGTGCTCTGACTGCTCTACATAAGATCAATTCTTGGAGCTTTGATTCAACTCCATTGGTAGATGAAAACAGCACATCAATTTTACCTGATCCAAAGGTAAAACCCAAGTCAGGAAATGCCAATGTTGGACTAGTAGTTGGGTTGGTTGTTGGGGGAGCTGTTATCTTGGCTGGAAGAGGAAGGAAACAGCTGATGAAAGTAGTGATGATGATACTGGGATACTTCATGATTTGA

Protein Analysis

285

Amino Acids

31.01

Weight (kDa)

6.31

Isoelectric Point (pI)

21.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 3 - 233 1e-54 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 440
AccI GTMKAC 1 cut(s) 54
AciI CCGC 3 cut(s) 34, 112, 332
AclWI GGATC 1 cut(s) 707
AcoI YGGCCR 2 cut(s) 79, 222
AcsI RAATTY 1 cut(s) 553
AfaI GTAC 2 cut(s) 49, 68
AfiI CCNNNNNNNGG 5 cut(s) 249, 328, 435, 440, 734
AgsI TTSAA 4 cut(s) 62, 157, 530, 672
AhlI ACTAGT 1 cut(s) 754
AjnI CCWGG 1 cut(s) 540
AleI CACNNNNGTG 1 cut(s) 389
AluBI AGCT 3 cut(s) 663, 782, 814
AluI AGCT 3 cut(s) 663, 782, 814
Alw21I GWGCWC 1 cut(s) 631
AlwI GGATC 1 cut(s) 707
AoxI GGCC 5 cut(s) 27, 79, 204, 222, 268
ApaI GGGCCC 1 cut(s) 31
ApeKI GCWGC 1 cut(s) 617
ApoI RAATTY 1 cut(s) 553
ArsI GACNNNNNNTTYG 2 cut(s) 36, 68
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 3 cut(s) 27, 28, 228
AsuC2I CCSGG 1 cut(s) 226
AsuHPI GGTGA 4 cut(s) 31, 86, 206, 556
AvaII GGWCC 1 cut(s) 228
BaeGI GKGCMC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 31
Bbv12I GWGCWC 1 cut(s) 631
BbvI GCAGC 1 cut(s) 629
BccI CCATC 2 cut(s) 17, 191
BciT130I CCWGG 1 cut(s) 542
BciVI GTATCC 1 cut(s) 836
BclI TGATCA 1 cut(s) 546
BcnI CCSGG 1 cut(s) 226
BcuI ACTAGT 1 cut(s) 754
BfaI CTAG 1 cut(s) 755
BfoI RGCGCY 1 cut(s) 221
BfuI GTATCC 1 cut(s) 836
BisI GCNGC 1 cut(s) 618
BlsI GCNGC 1 cut(s) 619
Bme1390I CCNGG 2 cut(s) 226, 542
Bme18I GGWCC 1 cut(s) 228
BmgT120I GGNCC 3 cut(s) 27, 28, 228
BmiI GGNNCC 3 cut(s) 28, 29, 229
BmrFI CCNGG 2 cut(s) 226, 542
BmrI ACTGGG 1 cut(s) 848
BmsI GCATC 1 cut(s) 405
BmuI ACTGGG 1 cut(s) 848
BpmI CTGGAG 1 cut(s) 226
BpuMI CCSGG 1 cut(s) 226
BsaJI CCNNGG 1 cut(s) 434
BsaWI WCCGGW 1 cut(s) 125
BsaXI ACNNNNNCTCC 6 cut(s) 90, 120, 170, 200, 392, 422
Bsc4I CCNNNNNNNGG 5 cut(s) 249, 328, 435, 440, 734
Bse118I RCCGGY 1 cut(s) 220
Bse1I ACTGG 2 cut(s) 445, 843
BseBI CCWGG 1 cut(s) 542
BseDI CCNNGG 1 cut(s) 434
BseLI CCNNNNNNNGG 5 cut(s) 249, 328, 435, 440, 734
BseMII CTCAG 1 cut(s) 579
BseNI ACTGG 2 cut(s) 445, 843
BseRI GAGGAG 1 cut(s) 98
BseSI GKGCMC 1 cut(s) 31
BseX3I CGGCCG 2 cut(s) 79, 222
BseXI GCAGC 1 cut(s) 629
Bsh1285I CGRYCG 3 cut(s) 82, 225, 336
BshFI GGCC 5 cut(s) 29, 81, 206, 224, 270
BsiEI CGRYCG 3 cut(s) 82, 225, 336
BsiHKAI GWGCWC 1 cut(s) 631
BsiSI CCGG 4 cut(s) 126, 174, 221, 225
BslI CCNNNNNNNGG 5 cut(s) 249, 328, 435, 440, 734
BsnI GGCC 5 cut(s) 29, 81, 206, 224, 270
Bsp120I GGGCCC 1 cut(s) 27
Bsp1286I GDGCHC 2 cut(s) 31, 631
Bsp143I GATC 4 cut(s) 546, 571, 648, 712
Bsp19I CCATGG 1 cut(s) 434
BspACI CCGC 3 cut(s) 34, 112, 332
BspANI GGCC 5 cut(s) 29, 81, 206, 224, 270
BspCNI CTCAG 1 cut(s) 578
BspHI TCATGA 1 cut(s) 849
BspLI GGNNCC 3 cut(s) 28, 29, 229
BspPI GGATC 1 cut(s) 707
BsrFI RCCGGY 1 cut(s) 220
BsrI ACTGG 2 cut(s) 445, 843
BssAI RCCGGY 1 cut(s) 220
BssECI CCNNGG 1 cut(s) 434
BssMI GATC 4 cut(s) 546, 571, 648, 712
BssT1I CCWWGG 1 cut(s) 434
Bst2UI CCWGG 1 cut(s) 542
Bst4CI ACNGT 3 cut(s) 52, 194, 478
Bst6I CTCTTC 1 cut(s) 793
BstAPI GCANNNNNTGC 1 cut(s) 626
BstC8I GCNNGC 2 cut(s) 204, 222
BstDEI CTNAG 1 cut(s) 565
BstDSI CCRYGG 1 cut(s) 434
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 4 cut(s) 549, 574, 651, 715
BstMBI GATC 4 cut(s) 546, 571, 648, 712
BstMCI CGRYCG 3 cut(s) 82, 225, 336
BstMWI GCNNNNNNNGC 2 cut(s) 626, 635
BstNI CCWGG 1 cut(s) 542
BstSCI CCNGG 2 cut(s) 224, 540
BstSLI GKGCMC 1 cut(s) 31
BstV1I GCAGC 1 cut(s) 629
BstZI CGGCCG 2 cut(s) 79, 222
BsuI GTATCC 1 cut(s) 836
BsuRI GGCC 5 cut(s) 29, 81, 206, 224, 270
BtgI CCRYGG 1 cut(s) 434
BtsIMutI CAGTG 1 cut(s) 233
Cac8I GCNNGC 2 cut(s) 204, 222
CciI TCATGA 1 cut(s) 849
CfoI GCGC 1 cut(s) 220
Cfr10I RCCGGY 1 cut(s) 220
Cfr13I GGNCC 3 cut(s) 27, 28, 228
CseI GACGC 1 cut(s) 64
Csp6I GTAC 2 cut(s) 48, 67
CviAII CATG 4 cut(s) 304, 389, 435, 850
CviQI GTAC 2 cut(s) 48, 67
DdeI CTNAG 1 cut(s) 565
DpnI GATC 4 cut(s) 548, 573, 650, 714
DpnII GATC 4 cut(s) 546, 571, 648, 712
EaeI YGGCCR 2 cut(s) 79, 222
EagI CGGCCG 2 cut(s) 79, 222
Eam1104I CTCTTC 1 cut(s) 793
EarI CTCTTC 1 cut(s) 793
EciI GGCGGA 2 cut(s) 23, 101
EclXI CGGCCG 2 cut(s) 79, 222
Eco130I CCWWGG 1 cut(s) 434
Eco24I GRGCYC 1 cut(s) 31
Eco32I GATATC 1 cut(s) 346
Eco47I GGWCC 1 cut(s) 228
Eco52I CGGCCG 2 cut(s) 79, 222
EcoO109I RGGNCCY 3 cut(s) 27, 28, 228
EcoRII CCWGG 1 cut(s) 540
EcoRV GATATC 1 cut(s) 346
EcoT14I CCWWGG 1 cut(s) 434
EcoT38I GRGCYC 1 cut(s) 31
ErhI CCWWGG 1 cut(s) 434
FaeI CATG 4 cut(s) 307, 392, 438, 853
FaiI YATR 8 cut(s) 215, 300, 305, 390, 436, 452, 645, 851
FatI CATG 4 cut(s) 303, 388, 434, 849
FbaI TGATCA 1 cut(s) 546
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 1 cut(s) 618
FriOI GRGCYC 1 cut(s) 31
Fsp4HI GCNGC 1 cut(s) 618
FspBI CTAG 1 cut(s) 755
GlaI GCGC 1 cut(s) 219
GluI GCNGC 1 cut(s) 618
GsuI CTGGAG 1 cut(s) 226
HaeII RGCGCY 1 cut(s) 221
HaeIII GGCC 5 cut(s) 29, 81, 206, 224, 270
HapII CCGG 4 cut(s) 126, 174, 221, 225
HgaI GACGC 1 cut(s) 64
HhaI GCGC 1 cut(s) 220
Hin1II CATG 4 cut(s) 307, 392, 438, 853
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 2 cut(s) 55, 280
HindII GTYRAC 2 cut(s) 55, 280
HinfI GANTC 2 cut(s) 170, 668
HpaII CCGG 4 cut(s) 126, 174, 221, 225
HphI GGTGA 4 cut(s) 31, 86, 206, 556
Hpy166II GTNNAC 3 cut(s) 55, 280, 309
Hpy188I TCNGA 1 cut(s) 633
Hpy188III TCNNGA 3 cut(s) 243, 735, 850
Hpy8I GTNNAC 3 cut(s) 55, 280, 309
Hpy99I CGWCG 2 cut(s) 56, 80
HpyAV CCTTC 5 cut(s) 112, 217, 248, 526, 798
HpyCH4III ACNGT 3 cut(s) 52, 194, 478
HpyCH4IV ACGT 1 cut(s) 524
HpyF10VI GCNNNNNNNGC 2 cut(s) 626, 635
HpyF3I CTNAG 1 cut(s) 565
HpySE526I ACGT 1 cut(s) 524
Hsp92II CATG 4 cut(s) 307, 392, 438, 853
HspAI GCGC 1 cut(s) 218
KroI GCCGGC 1 cut(s) 220
KroNI GCCGGC 1 cut(s) 222
Ksp22I TGATCA 1 cut(s) 546
Kzo9I GATC 4 cut(s) 546, 571, 648, 712
LmnI GCTCC 3 cut(s) 582, 660, 779
Lsp1109I GCAGC 1 cut(s) 629
LweI GCATC 1 cut(s) 405
MaeI CTAG 1 cut(s) 755
MaeII ACGT 1 cut(s) 524
MaeIII GTNAC 2 cut(s) 424, 478
MalI GATC 4 cut(s) 548, 573, 650, 714
MboI GATC 4 cut(s) 546, 571, 648, 712
MboII GAAGA 3 cut(s) 202, 340, 810
MhlI GDGCHC 2 cut(s) 31, 631
MluCI AATT 4 cut(s) 379, 553, 652, 702
MlyI GAGTC 1 cut(s) 164
MmeI TCCRAC 1 cut(s) 730
MnlI CCTC 9 cut(s) 41, 47, 116, 119, 196, 241, 281, 505, 794
MroNI GCCGGC 1 cut(s) 220
MslI CAYNNNNRTG 1 cut(s) 389
MspA1I CMGCKG 1 cut(s) 814
MspI CCGG 4 cut(s) 126, 174, 221, 225
MspR9I CCNGG 2 cut(s) 226, 542
MvaI CCWGG 1 cut(s) 542
MwoI GCNNNNNNNGC 2 cut(s) 626, 635
NaeI GCCGGC 1 cut(s) 222
NciI CCSGG 1 cut(s) 226
NcoI CCATGG 1 cut(s) 434
NdeII GATC 4 cut(s) 546, 571, 648, 712
NgoMIV GCCGGC 1 cut(s) 220
NlaIII CATG 4 cut(s) 307, 392, 438, 853
NlaIV GGNNCC 3 cut(s) 28, 29, 229
NmeAIII GCCGAG 2 cut(s) 107, 593
OliI CACNNNNGTG 1 cut(s) 389
PagI TCATGA 1 cut(s) 849
PdiI GCCGGC 1 cut(s) 222
PfeI GAWTC 1 cut(s) 668
PflMI CCANNNNNTGG 1 cut(s) 440
PkrI GCNGC 1 cut(s) 619
PleI GAGTC 1 cut(s) 164
PpsI GAGTC 1 cut(s) 164
PpuMI RGGWCCY 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 228
Psp6I CCWGG 1 cut(s) 540
PspGI CCWGG 1 cut(s) 540
PspN4I GGNNCC 3 cut(s) 28, 29, 229
PspOMI GGGCCC 1 cut(s) 27
PspPI GGNCC 3 cut(s) 27, 28, 228
PspPPI RGGWCCY 1 cut(s) 228
PvuII CAGCTG 1 cut(s) 814
RsaI GTAC 2 cut(s) 49, 68
RsaNI GTAC 2 cut(s) 48, 67
RseI CAYNNNNRTG 1 cut(s) 389
SalI GTCGAC 1 cut(s) 53
SatI GCNGC 1 cut(s) 618
Sau3AI GATC 4 cut(s) 546, 571, 648, 712
Sau96I GGNCC 3 cut(s) 27, 28, 228
SchI GAGTC 1 cut(s) 164
ScrFI CCNGG 2 cut(s) 226, 542
SduI GDGCHC 2 cut(s) 31, 631
SfaNI GCATC 1 cut(s) 405
SinI GGWCC 1 cut(s) 228
SmiMI CAYNNNNRTG 1 cut(s) 389
SpeI ACTAGT 1 cut(s) 754
Sse9I AATT 4 cut(s) 379, 553, 652, 702
SsiI CCGC 3 cut(s) 34, 112, 332
SspI AATATT 1 cut(s) 358
SspMI CTAG 1 cut(s) 755
StyD4I CCNGG 2 cut(s) 224, 540
StyI CCWWGG 1 cut(s) 434
TaaI ACNGT 3 cut(s) 52, 194, 478
TaiI ACGT 1 cut(s) 527
TaqI TCGA 5 cut(s) 21, 54, 336, 399, 497
TasI AATT 4 cut(s) 379, 553, 652, 702
TfiI GAWTC 1 cut(s) 668
TscAI CASTG 1 cut(s) 240
TseI GCWGC 1 cut(s) 617
TspDTI ATGAA 5 cut(s) 202, 477, 702, 833, 838
TspGWI ACGGA 1 cut(s) 400
TspRI CASTG 1 cut(s) 240
Van91I CCANNNNNTGG 1 cut(s) 440
VpaK11BI GGWCC 1 cut(s) 228
XapI RAATTY 1 cut(s) 553
XmiI GTMKAC 1 cut(s) 54
XspI CTAG 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.