FvH4_7g14950

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000038
Physical Location & Seq
Forward (+)
13064625 .. 13066876
2252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14950.t1

Sequence Viewer

Length: 1926 bp
ATGTCTCTTAAAGTCATCTGTGGGCAGGCAATCTTTAGTCTCTTCATTTTCATCAAATTTCTTACTCTCTTTGCTCACACAACTTCATTTAGTATACCTCACTTCTCCCCTGGTACAGAGAACATACTGTACGAAGGCGATGCTACGATCAAGTCGGGAAATGTTGAATTCAACCCACAATTTGACATATTTCGTGTAGGGCGGTGCACTTATTCAAAACCTTTCCAGCTTTGGGACTCTACAACTCCAGCTCGGTCACTGTCAAACTTTACTACCAACTTCACATTCATGATGGACACTAATGGCGAAGAACCCTTCACCGATGGATTTGCCTTTTTCCTTGCACCTTTCGGCTATCCAATCCCGCCGAACTCAGCCGGTGGAGATCTAGGACTGTTCAACATCACCAATCAATTAGATACGTCCCAAAACAGAGTTGTCCTAGTTGAGTTTGATACCTACTCAAACGAATGGGATCCAAAGGGACCTCATGTTGGCATCAATATAAATAGTCTTTTATCAGTCGTAAATGCTAGTTGGGATTTTAACGTCAACAAATCAAGAAAGGTGATATCTGCACAAGTAACTTACAATGCGAGCACCTACATGCTGACTGTGTTTTGGAAGTACAATGAAGCTACGACGTATGAAAATCCTCTTCCTTTCAAAATCGACTTACGAGATGTTCTCCCCGAAAGGGTTGCTATTGGTTTCTCAGCTGCTACCGGAACATACCCGGAAAATCTTATTATATCAACATGGGAGTTCAATTCAGATTTAGATTCTGATGATAGCAGCAGGAAAGGGAATAAGCGTGCAATATTCTTGATAGCGGCCATGACTGTAGTTACTTTCTTCATTTTAATGCTTGGTGTGGCCTTATATTGGTCAGTGGTAAAGAAGCGCATAGCAAAGATCAAAGGGCAGAACAATGTTGTGGTACCCTCTGTAAGTAAGCATCTGGAGACACTAGCCTTTCCGAGACGATTTTCTTACAAAGAATTAGTTGCGGCTACCTTTGGCTTTGCAAATGACAGAAGGCTAGGCCATGGAGGGTCAGGACAAGTTTATAAAGGAGTCCTACAAGATCTAGGCTGCTCGGTTGCTGTGAAGAGAATCTTTGCCGACTCTGAGCATTATGAGAAAGTTTTCATCAACGAAGTGAAAATCATTAGCCGCTTGATACATAAAAACTTGGTGATGTTTATAGGATGGTGTCATGAGCAAGGTGAGTGCTTACTTGTTTATGCTTACATGCCTAATAGCAGCCTTGATGCTCATCTGTTTGGCCCCAGAACAACACTGCAATGGGATATCAGGTACAAGATAGCTTTGGGATTAGCCTCAGCCCTTCATTATCTACACGAAGATGCAGAGCAGTGCATCCTTCATAGGGATATTAAATCAGCAAATGTACTATTGGATAACGATTTCAACATGAAGCTCGGTGATTTTGGGATTGCTAAACTCTTGGATCCTCACTTGAGGACTAGGACAACCGGGGTGGCAGGAACGTTTGGGTACATGGCCCCGGAATATGCTTTTCAAGGGAGAGCAAGCAAGGAGTCGGACATGTTCAGTTTTGGAGTCGTGGCTTTGGAAATTGCTTGTGGAAGGCAGACTTACCAAGATGGAGAGTATCACGTACCACTTTCCGAGTGGGTTTGGCAATCGTACCTTGCAGAAAGTCTTCTCGATGTAGCTGATGAGAGATTGGATATGAAGTTTGATCCAAGTGAAATGAAGTGCTTGCTAATTGTGGGATTATGGTGCACTCATCCAAGCAACAAGGAGAGACCTAAAGCAGGGCAAGTTATGAAGGTTCTTCAGCTCGAAGCACCATTGCCTCAACTTGCATGCAATAGGCATCATGATCATCATCAATATAATGTCTCTGTACTACCTGATCCCGGAACAATCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

642

Amino Acids

72.19

Weight (kDa)

6.18

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 266 3e-60 Legume lectin domain
Lectin_L-type_dom PF18483 88 - 245 6.5e-07 Legume lectin beta-barrel domain
Pkinase PF00069 343 - 606 1.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 345 - 556 6.6e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1071
Acc65I GGTACC 1 cut(s) 940
AccB1I GGYRCC 1 cut(s) 940
AccI GTMKAC 1 cut(s) 94
AciI CCGC 5 cut(s) 202, 365, 833, 1010, 1177
AclI AACGTT 1 cut(s) 1514
AclWI GGATC 6 cut(s) 470, 483, 1469, 1482, 1724, 1901
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 2 cut(s) 56, 167
AcuI CTGAAG 1 cut(s) 1811
AfiI CCNNNNNNNGG 7 cut(s) 232, 494, 697, 885, 1393, 1805, 1910
AflIII ACRYGT 1 cut(s) 1572
AgsI TTSAA 8 cut(s) 167, 172, 216, 400, 667, 769, 1435, 1547
AjnI CCWGG 1 cut(s) 109
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 8 cut(s) 229, 251, 638, 719, 1331, 1444, 1703, 1831
AluI AGCT 8 cut(s) 229, 251, 638, 719, 1331, 1444, 1703, 1831
Alw21I GWGCWC 3 cut(s) 209, 602, 1775
Alw26I GTCTC 6 cut(s) 9, 44, 959, 976, 1789, 1897
Alw44I GTGCAC 2 cut(s) 205, 1771
AlwI GGATC 6 cut(s) 470, 483, 1469, 1482, 1724, 1901
AoxI GGCC 5 cut(s) 834, 876, 1045, 1288, 1527
ApaLI GTGCAC 2 cut(s) 205, 1771
ApeKI GCWGC 4 cut(s) 719, 795, 1095, 1266
ApoI RAATTY 2 cut(s) 56, 167
Asp700I GAANNNNTTC 2 cut(s) 1148, 1689
Asp718I GGTACC 1 cut(s) 940
AspLEI GCGC 1 cut(s) 906
AspS9I GGNCC 3 cut(s) 485, 1289, 1528
AsuC2I CCSGG 4 cut(s) 737, 1501, 1532, 1911
AsuHPI GGTGA 6 cut(s) 310, 397, 580, 1210, 1241, 1460
AvaII GGWCC 1 cut(s) 485
BaeGI GKGCMC 2 cut(s) 209, 1775
BamHI GGATCC 2 cut(s) 475, 1474
BanI GGYRCC 1 cut(s) 940
BbsI GAAGAC 1 cut(s) 1682
Bbv12I GWGCWC 3 cut(s) 209, 602, 1775
BbvCI CCTCAGC 1 cut(s) 1345
BbvI GCAGC 4 cut(s) 706, 807, 1082, 1278
BccI CCATC 4 cut(s) 286, 317, 1206, 1625
BcgI CGANNNNNNTGC 6 cut(s) 122, 156, 311, 345, 683, 717
BciT130I CCWGG 1 cut(s) 111
BclI TGATCA 1 cut(s) 1873
BcnI CCSGG 4 cut(s) 737, 1501, 1532, 1911
BcoDI GTCTC 6 cut(s) 9, 44, 959, 976, 1789, 1897
BfaI CTAG 7 cut(s) 389, 443, 534, 971, 1043, 1091, 1491
BfmI CTRYAG 1 cut(s) 843
BglII AGATCT 2 cut(s) 385, 1087
BisI GCNGC 7 cut(s) 720, 796, 834, 1011, 1096, 1177, 1267
BlsI GCNGC 7 cut(s) 721, 797, 835, 1012, 1097, 1178, 1268
Bme1390I CCNGG 5 cut(s) 111, 737, 1501, 1532, 1911
Bme18I GGWCC 1 cut(s) 485
BmgT120I GGNCC 3 cut(s) 485, 1289, 1528
BmiI GGNNCC 6 cut(s) 477, 486, 942, 1291, 1476, 1530
BmrFI CCNGG 5 cut(s) 111, 737, 1501, 1532, 1911
BmsI GCATC 7 cut(s) 130, 507, 967, 1264, 1360, 1392, 1876
BpiI GAAGAC 1 cut(s) 1682
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 2 cut(s) 231, 983
Bpu10I CCTNAGC 1 cut(s) 1345
BpuEI CTTGAG 1 cut(s) 1504
BpuMI CCSGG 4 cut(s) 737, 1501, 1532, 1911
BsaAI YACGTR 1 cut(s) 1645
BsaBI GATNNNNATC 2 cut(s) 1278, 1878
BsaI GGTCTC 1 cut(s) 1789
BsaJI CCNNGG 4 cut(s) 109, 1048, 1500, 1530
BsaWI WCCGGW 1 cut(s) 725
Bsc4I CCNNNNNNNGG 7 cut(s) 232, 494, 697, 885, 1393, 1805, 1910
Bse118I RCCGGY 1 cut(s) 377
Bse3DI GCAATG 2 cut(s) 1313, 1841
Bse8I GATNNNNATC 2 cut(s) 1278, 1878
BseBI CCWGG 1 cut(s) 111
BseDI CCNNGG 4 cut(s) 109, 1048, 1500, 1530
BseGI GGATG 3 cut(s) 1217, 1383, 1777
BseJI GATNNNNATC 2 cut(s) 1278, 1878
BseLI CCNNNNNNNGG 7 cut(s) 232, 494, 697, 885, 1393, 1805, 1910
BseMI GCAATG 2 cut(s) 1313, 1841
BseMII CTCAG 4 cut(s) 387, 729, 1122, 1359
BseSI GKGCMC 2 cut(s) 209, 1775
BseXI GCAGC 4 cut(s) 706, 807, 1082, 1278
BsgI GTGCAG 1 cut(s) 561
BshFI GGCC 5 cut(s) 836, 878, 1047, 1290, 1529
BshNI GGYRCC 1 cut(s) 940
BsiHKAI GWGCWC 3 cut(s) 209, 602, 1775
BsiSI CCGG 6 cut(s) 378, 726, 737, 1500, 1532, 1911
BslFI GGGAC 3 cut(s) 248, 409, 498
BslI CCNNNNNNNGG 7 cut(s) 232, 494, 697, 885, 1393, 1805, 1910
BsmAI GTCTC 6 cut(s) 9, 44, 959, 976, 1789, 1897
BsmBI CGTCTC 1 cut(s) 976
BsmFI GGGAC 3 cut(s) 248, 409, 498
BsnI GGCC 5 cut(s) 836, 878, 1047, 1290, 1529
Bso31I GGTCTC 1 cut(s) 1789
Bsp1286I GDGCHC 3 cut(s) 209, 602, 1775
Bsp143I GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
Bsp19I CCATGG 1 cut(s) 1048
BspACI CCGC 5 cut(s) 202, 365, 833, 1010, 1177
BspANI GGCC 5 cut(s) 836, 878, 1047, 1290, 1529
BspCNI CTCAG 4 cut(s) 386, 728, 1123, 1358
BspHI TCATGA 3 cut(s) 288, 1219, 1870
BspLI GGNNCC 6 cut(s) 477, 486, 942, 1291, 1476, 1530
BspPI GGATC 6 cut(s) 470, 483, 1469, 1482, 1724, 1901
BspT107I GGYRCC 1 cut(s) 940
BspTNI GGTCTC 1 cut(s) 1789
BsrDI GCAATG 2 cut(s) 1313, 1841
BsrFI RCCGGY 1 cut(s) 377
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 4 cut(s) 109, 1048, 1500, 1530
BssMI GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
BssNAI GTATAC 1 cut(s) 95
BssT1I CCWWGG 1 cut(s) 1048
Bst1107I GTATAC 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 111
Bst4CI ACNGT 5 cut(s) 129, 261, 396, 616, 844
Bst6I CTCTTC 3 cut(s) 47, 663, 1106
BstBAI YACGTR 1 cut(s) 1645
BstC8I GCNNGC 6 cut(s) 27, 598, 816, 1558, 1751, 1858
BstDEI CTNAG 4 cut(s) 373, 715, 1131, 1345
BstDSI CCRYGG 1 cut(s) 1048
BstENI CCTNNNNNAGG 1 cut(s) 1803
BstF5I GGATG 3 cut(s) 1217, 1383, 1777
BstHHI GCGC 1 cut(s) 906
BstKTI GATC 9 cut(s) 150, 388, 478, 918, 1090, 1477, 1732, 1876, 1909
BstMAI GTCTC 6 cut(s) 9, 44, 959, 976, 1789, 1897
BstMBI GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
BstNI CCWGG 1 cut(s) 111
BstNSI RCATGY 4 cut(s) 610, 1258, 1576, 1860
BstSCI CCNGG 5 cut(s) 109, 735, 1499, 1530, 1909
BstSFI CTRYAG 1 cut(s) 843
BstSLI GKGCMC 2 cut(s) 209, 1775
BstV1I GCAGC 4 cut(s) 706, 807, 1082, 1278
BstV2I GAAGAC 1 cut(s) 1682
BstX2I RGATCY 4 cut(s) 385, 475, 1087, 1474
BstYI RGATCY 4 cut(s) 385, 475, 1087, 1474
BstZ17I GTATAC 1 cut(s) 95
BsuRI GGCC 5 cut(s) 836, 878, 1047, 1290, 1529
BtgI CCRYGG 1 cut(s) 1048
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 3 cut(s) 1217, 1383, 1777
BtsI GCAGTG 2 cut(s) 1301, 1385
BtsIMutI CAGTG 4 cut(s) 257, 897, 1301, 1385
Cac8I GCNNGC 6 cut(s) 27, 598, 816, 1558, 1751, 1858
CciI TCATGA 3 cut(s) 288, 1219, 1870
CfoI GCGC 1 cut(s) 906
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 3 cut(s) 485, 1289, 1528
CspCI CAANNNNNGTGG 2 cut(s) 1485, 1520
DdeI CTNAG 4 cut(s) 373, 715, 1131, 1345
DpnI GATC 9 cut(s) 149, 387, 477, 917, 1089, 1476, 1731, 1875, 1908
DpnII GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 3 cut(s) 47, 663, 1106
EarI CTCTTC 3 cut(s) 47, 663, 1106
Eco130I CCWWGG 1 cut(s) 1048
Eco31I GGTCTC 1 cut(s) 1789
Eco32I GATATC 2 cut(s) 573, 1315
Eco47I GGWCC 1 cut(s) 485
Eco57I CTGAAG 1 cut(s) 1811
EcoNI CCTNNNNNAGG 1 cut(s) 1803
EcoO109I RGGNCCY 1 cut(s) 485
EcoRI GAATTC 1 cut(s) 167
EcoRII CCWGG 1 cut(s) 109
EcoRV GATATC 2 cut(s) 573, 1315
EcoT14I CCWWGG 1 cut(s) 1048
ErhI CCWWGG 1 cut(s) 1048
Esp3I CGTCTC 1 cut(s) 976
FalI AAGNNNNNCTT 4 cut(s) 1103, 1135, 1606, 1638
FaqI GGGAC 3 cut(s) 248, 409, 498
FauI CCCGC 1 cut(s) 372
FbaI TGATCA 1 cut(s) 1873
FblI GTMKAC 1 cut(s) 94
Fnu4HI GCNGC 7 cut(s) 720, 796, 834, 1011, 1096, 1177, 1267
FokI GGATG 3 cut(s) 1224, 1370, 1764
Fsp4HI GCNGC 7 cut(s) 720, 796, 834, 1011, 1096, 1177, 1267
FspBI CTAG 7 cut(s) 389, 443, 534, 971, 1043, 1091, 1491
GlaI GCGC 1 cut(s) 905
GluI GCNGC 7 cut(s) 720, 796, 834, 1011, 1096, 1177, 1267
GsuI CTGGAG 2 cut(s) 231, 983
HaeIII GGCC 5 cut(s) 836, 878, 1047, 1290, 1529
HapII CCGG 6 cut(s) 378, 726, 737, 1500, 1532, 1911
HhaI GCGC 1 cut(s) 906
Hin6I GCGC 1 cut(s) 904
HinP1I GCGC 1 cut(s) 904
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HinfI GANTC 7 cut(s) 236, 782, 1077, 1116, 1127, 1565, 1587
HpaII CCGG 6 cut(s) 378, 726, 737, 1500, 1532, 1911
HphI GGTGA 6 cut(s) 310, 397, 580, 1210, 1241, 1460
Hpy166II GTNNAC 4 cut(s) 95, 207, 553, 1773
Hpy188I TCNGA 6 cut(s) 775, 787, 981, 1132, 1570, 1657
Hpy188III TCNNGA 9 cut(s) 156, 289, 561, 826, 962, 1059, 1220, 1694, 1871
Hpy8I GTNNAC 4 cut(s) 95, 207, 553, 1773
Hpy99I CGWCG 1 cut(s) 646
HpyAV CCTTC 7 cut(s) 128, 325, 1032, 1361, 1397, 1608, 1813
HpyCH4III ACNGT 5 cut(s) 129, 261, 396, 616, 844
HpyCH4IV ACGT 5 cut(s) 422, 549, 644, 1514, 1644
HpyF3I CTNAG 4 cut(s) 373, 715, 1131, 1345
HpySE526I ACGT 5 cut(s) 422, 549, 644, 1514, 1644
HspAI GCGC 1 cut(s) 904
KpnI GGTACC 1 cut(s) 944
Ksp22I TGATCA 1 cut(s) 1873
Kzo9I GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
Lsp1109I GCAGC 4 cut(s) 706, 807, 1082, 1278
LweI GCATC 7 cut(s) 130, 507, 967, 1264, 1360, 1392, 1876
MaeI CTAG 7 cut(s) 389, 443, 534, 971, 1043, 1091, 1491
MaeII ACGT 5 cut(s) 422, 549, 644, 1514, 1644
MaeIII GTNAC 3 cut(s) 255, 583, 847
MalI GATC 9 cut(s) 149, 387, 477, 917, 1089, 1476, 1731, 1875, 1908
MboI GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
MboII GAAGA 8 cut(s) 34, 320, 650, 847, 1123, 1379, 1682, 1817
MflI RGATCY 4 cut(s) 385, 475, 1087, 1474
MhlI GDGCHC 3 cut(s) 209, 602, 1775
MluCI AATT 8 cut(s) 56, 167, 179, 413, 769, 1001, 1602, 1755
MlyI GAGTC 5 cut(s) 230, 1086, 1121, 1574, 1596
MmeI TCCRAC 1 cut(s) 1548
MnlI CCTC 9 cut(s) 108, 498, 666, 955, 1046, 1354, 1479, 1488, 1857
MroXI GAANNNNTTC 2 cut(s) 1148, 1689
MseI TTAA 4 cut(s) 9, 546, 863, 1401
MslI CAYNNNNRTG 5 cut(s) 287, 605, 863, 1306, 1368
MspA1I CMGCKG 1 cut(s) 719
MspI CCGG 6 cut(s) 378, 726, 737, 1500, 1532, 1911
MspR9I CCNGG 5 cut(s) 111, 737, 1501, 1532, 1911
MvaI CCWGG 1 cut(s) 111
NciI CCSGG 4 cut(s) 737, 1501, 1532, 1911
NcoI CCATGG 1 cut(s) 1048
NdeII GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
NlaIV GGNNCC 6 cut(s) 477, 486, 942, 1291, 1476, 1530
NmuCI GTSAC 1 cut(s) 255
NspI RCATGY 4 cut(s) 610, 1258, 1576, 1860
PaeI GCATGC 1 cut(s) 1860
PagI TCATGA 3 cut(s) 288, 1219, 1870
PciI ACATGT 1 cut(s) 1572
PdmI GAANNNNTTC 2 cut(s) 1148, 1689
PfeI GAWTC 2 cut(s) 782, 1116
PfoI TCCNGGA 1 cut(s) 1909
PkrI GCNGC 7 cut(s) 721, 797, 835, 1012, 1097, 1178, 1268
PleI GAGTC 5 cut(s) 230, 1085, 1121, 1573, 1595
PpsI GAGTC 5 cut(s) 230, 1085, 1121, 1573, 1595
Ppu21I YACGTR 1 cut(s) 1645
PpuMI RGGWCCY 1 cut(s) 485
PscI ACATGT 1 cut(s) 1572
PsiI TTATAA 1 cut(s) 1071
Psp1406I AACGTT 1 cut(s) 1514
Psp5II RGGWCCY 1 cut(s) 485
Psp6I CCWGG 1 cut(s) 109
PspGI CCWGG 1 cut(s) 109
PspN4I GGNNCC 6 cut(s) 477, 486, 942, 1291, 1476, 1530
PspPI GGNCC 3 cut(s) 485, 1289, 1528
PspPPI RGGWCCY 1 cut(s) 485
PsrI GAACNNNNNNTAC 2 cut(s) 113, 145
PsuI RGATCY 4 cut(s) 385, 475, 1087, 1474
PvuII CAGCTG 1 cut(s) 719
RseI CAYNNNNRTG 5 cut(s) 287, 605, 863, 1306, 1368
SaqAI TTAA 4 cut(s) 9, 546, 863, 1401
SatI GCNGC 7 cut(s) 720, 796, 834, 1011, 1096, 1177, 1267
Sau3AI GATC 9 cut(s) 147, 385, 475, 915, 1087, 1474, 1729, 1873, 1906
Sau96I GGNCC 3 cut(s) 485, 1289, 1528
SchI GAGTC 5 cut(s) 230, 1086, 1121, 1574, 1596
ScrFI CCNGG 5 cut(s) 111, 737, 1501, 1532, 1911
SduI GDGCHC 3 cut(s) 209, 602, 1775
SfaNI GCATC 7 cut(s) 130, 507, 967, 1264, 1360, 1392, 1876
SfcI CTRYAG 1 cut(s) 843
SinI GGWCC 1 cut(s) 485
SmiMI CAYNNNNRTG 5 cut(s) 287, 605, 863, 1306, 1368
SmlI CTYRAG 1 cut(s) 1483
SmoI CTYRAG 1 cut(s) 1483
SphI GCATGC 1 cut(s) 1860
Sse9I AATT 8 cut(s) 56, 167, 179, 413, 769, 1001, 1602, 1755
SsiI CCGC 5 cut(s) 202, 365, 833, 1010, 1177
SspI AATATT 1 cut(s) 822
SspMI CTAG 7 cut(s) 389, 443, 534, 971, 1043, 1091, 1491
StyD4I CCNGG 5 cut(s) 109, 735, 1499, 1530, 1909
StyI CCWWGG 1 cut(s) 1048
TaaI ACNGT 5 cut(s) 129, 261, 396, 616, 844
TaiI ACGT 5 cut(s) 425, 552, 647, 1517, 1647
TaqI TCGA 3 cut(s) 672, 1695, 1833
TaqII GACCGA 1 cut(s) 243
TasI AATT 8 cut(s) 56, 167, 179, 413, 769, 1001, 1602, 1755
TatI WGTACW 3 cut(s) 627, 1414, 1897
TauI GCSGC 3 cut(s) 836, 1013, 1179
TfiI GAWTC 2 cut(s) 782, 1116
Tru1I TTAA 4 cut(s) 9, 546, 863, 1401
Tru9I TTAA 4 cut(s) 9, 546, 863, 1401
TscAI CASTG 4 cut(s) 264, 897, 1308, 1385
TseFI GTSAC 1 cut(s) 255
TseI GCWGC 4 cut(s) 719, 795, 1095, 1266
Tsp45I GTSAC 1 cut(s) 255
TspRI CASTG 4 cut(s) 264, 897, 1308, 1385
VneI GTGCAC 2 cut(s) 205, 1771
VpaK11BI GGWCC 1 cut(s) 485
XagI CCTNNNNNAGG 1 cut(s) 1803
XapI RAATTY 2 cut(s) 56, 167
XceI RCATGY 4 cut(s) 610, 1258, 1576, 1860
XcmI CCANNNNNNNNNTGG 1 cut(s) 1656
XmiI GTMKAC 1 cut(s) 94
XmnI GAANNNNTTC 2 cut(s) 1148, 1689
XspI CTAG 7 cut(s) 389, 443, 534, 971, 1043, 1091, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.