Prupe.8G117500_v2.0.a1

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000038
Physical Location & Seq
Forward (+)
14438785 .. 14440614
1830 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G117500.1

Sequence Viewer

Length: 1830 bp
ATGTTCTTCAATTTTTTCCAACCCTTTGTTCATCCACTTTCCTTCAGCATCAGTGACTTTGGTCGAGATGCAAACAACATACTTTATGAAGGTGATGCCGCTCCTTCTTCAGGAGTGATTGAACTCAGCACGATCACAGCCACAGATCTACAGGATATATATTGCCGCACTGGCCGGGCTACGTATGCAGAACCTTTGCACTTATGGGACTCTGCTAAACTGGCAGACTTCACTACTAATTTCTCTTTCATTATCGACACTGTTCATAATGATACCAACATTGGTGATGGACTTGTGTTTTTCCTTGCCCCTGTTCACTATCCAATTCCACCAAACTCTGCCGGTGGTGATCTAGGATTATTAAACACCACTACTCGTCATGACAAAGCATCCCAAAACCAAATTGTAATGGTTGAGTTTGACACTTCGCCAAACTCATGGGATCCACTCTGGCCACACGTTGGGATCAATATCAATACCATCTCCTCATTTGTTCATGCCCGTTGGGATGCTCTCGGCCACAGTGGGAAGAAGGCTCACGTACAGATAACTTACAATGCTACCACCAAGAACCTCACTGTGTTTTGGACATATGAGGAATATACTGATGTGGCCATCACTTCACTTTCTTACCATATTGACCTGAGAGAGGTTCTCCCAGAGTGGGTTACAATTGGATTTTCAACTGCCAATGGCTGTGCCCGAGAGCGGAATGCTATATATACATGGGATTTCAGATCAAACTCAGAGGAGTTAAGTACCAAAAAGAAGAGGAGGTTATTCTGGATTGGGGCCGTTGCAGTTTCTGTCTTCATTTTGATTCTTGGTGTAGCCATATGCTGGTTGGTGGTAAAGAGGCAGAAAAACAGGATTGATGAACATGGAAATGACTCCAATTCAGTAGCCTCTACAGATCTTGTGTGGCAAGCCTTGCCAAGACGATTTTCTTACGAAGAATTAGTTGCAGCCACCAATGACTTTGCAGACGACAGAAGGCTAGGCCAAGGAGGGTCAGGGAAAGTTTATAAAGGAATCATACAAGATCTAGGCTGCACAGTTGCTGTGAAGAGAATCGTCCCAGAATCCGAGCACTATGAGAAAGTCTTCATCAACGAAGTGAAAATAATAAGCCGCTTAATACACAGGAACCTGGTGCAATTCATTGGATGGTGTCATGAGCAAGGCGAGTGCTTACTTGTTTATGCATACATGCCTAACAGCAGCCTTGACACGCATCTATTCGGCTCTAGAACAACCTTGCAATGGGATTTGAGGTACACGATAGCTTTAGACTTGGCCACAGCCGTTCATTACCTACATGAAGATGCAGAGACGTGTGTCCTGCATAGGGATATCAAATCAGCTAACATATTGTTGGACTACGATTTCAAGACTAAGCTTGGTGATTTTGGGATTGCTAAGCTCGTGGATCCGCAGTTCAGGACTCAGACAACAGGAGTGGTAGGGACTTTTGGTTACATAGCCCCGGAATATGCAAATGGAGGTAGGGCTAGTAAAGAGTCAGACATGTATAGTTTTGGAGTTGTGGCCTTGGAACTTGCATGTGGAAGGAGGACTTATCAGGATGAAGAATTCCACGTGCCGCTTTTCAGGTGGGTTTGGCAGCTGTACCTTGCCGGAAATATGCTCTCTGCAGCTGATGAGAGATTGGATATGAATTTTGTTCCAAATGAAATGGAAACCTTGTTAATTGTGGGATTATGGTGTACTCATCCCAACAACAAGGAAAGACCAAAAGCGGGGCAAGTGATGAGGGTTCTTCGGCTTGAAGCACCATTGCCTCAACTTCCAAAAGACTTGCATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

610

Amino Acids

68.9

Weight (kDa)

5.67

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1026
AccB7I CCANNNNNTGG 2 cut(s) 461, 840
AccBSI CCGCTC 2 cut(s) 101, 709
AciI CCGC 7 cut(s) 99, 166, 709, 1132, 1433, 1604, 1760
AclWI GGATC 5 cut(s) 437, 450, 473, 1424, 1437
AcoI YGGCCR 5 cut(s) 172, 452, 517, 612, 1296
AcsI RAATTY 2 cut(s) 1592, 1678
AcuI CTGAAG 2 cut(s) 28, 93
AcvI CACGTG 1 cut(s) 1600
AfaI GTAC 5 cut(s) 543, 760, 1277, 1631, 1729
AfiI CCNNNNNNNGG 9 cut(s) 110, 461, 649, 664, 708, 840, 1263, 1348, 1760
AflIII ACRYGT 3 cut(s) 457, 1334, 1527
AgsI TTSAA 5 cut(s) 10, 122, 684, 1390, 1790
AjiI CACGTC 1 cut(s) 1335
AjnI CCWGG 1 cut(s) 1149
AjuI GAANNNNNNNTTGG 4 cut(s) 12, 44, 928, 960
AloI GAACNNNNNNTCC 2 cut(s) 1421, 1453
AluBI AGCT 6 cut(s) 1286, 1364, 1399, 1423, 1627, 1658
AluI AGCT 6 cut(s) 1286, 1364, 1399, 1423, 1627, 1658
Alw21I GWGCWC 1 cut(s) 1092
Alw26I GTCTC 1 cut(s) 1325
AlwI GGATC 5 cut(s) 437, 450, 473, 1424, 1437
AlwNI CAGNNNCTG 2 cut(s) 806, 1061
Ama87I CYCGRG 1 cut(s) 702
AoxI GGCC 8 cut(s) 172, 452, 517, 612, 792, 1000, 1296, 1548
ApeKI GCWGC 5 cut(s) 965, 1050, 1221, 1624, 1655
ApoI RAATTY 2 cut(s) 1592, 1678
Asp700I GAANNNNTTC 1 cut(s) 1103
AspS9I GGNCC 1 cut(s) 792
AsuC2I CCSGG 2 cut(s) 176, 1487
AsuHPI GGTGA 4 cut(s) 104, 296, 359, 1415
AvaI CYCGRG 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 703
BalI TGGCCA 3 cut(s) 454, 614, 1298
BamHI GGATCC 2 cut(s) 442, 1429
BauI CACGAG 1 cut(s) 1424
BbrPI CACGTG 1 cut(s) 1600
BbsI GAAGAC 2 cut(s) 802, 1096
Bbv12I GWGCWC 1 cut(s) 1092
BbvI GCAGC 5 cut(s) 977, 1037, 1233, 1636, 1667
BccI CCATC 4 cut(s) 281, 488, 623, 1161
BceAI ACGGC 2 cut(s) 779, 1289
BciT130I CCWGG 1 cut(s) 1151
BcnI CCSGG 2 cut(s) 176, 1487
BcoDI GTCTC 1 cut(s) 1325
BfaI CTAG 5 cut(s) 353, 998, 1046, 1248, 1512
BfmI CTRYAG 3 cut(s) 149, 909, 1653
BglI GCCNNNNNGGC 1 cut(s) 171
BglII AGATCT 3 cut(s) 145, 913, 1042
BisI GCNGC 9 cut(s) 99, 166, 966, 1051, 1132, 1222, 1604, 1625, 1656
BlpI GCTNAGC 1 cut(s) 1419
BlsI GCNGC 9 cut(s) 100, 167, 967, 1052, 1133, 1223, 1605, 1626, 1657
Bme1390I CCNGG 3 cut(s) 176, 1151, 1487
BmeT110I CYCGRG 1 cut(s) 702
BmgBI CACGTC 1 cut(s) 1335
BmgT120I GGNCC 1 cut(s) 792
BmiI GGNNCC 4 cut(s) 444, 793, 1148, 1431
BmrFI CCNGG 3 cut(s) 176, 1151, 1487
BmsI GCATC 7 cut(s) 57, 58, 85, 398, 499, 1243, 1315
BoxI GACNNNNGTC 2 cut(s) 60, 1337
BpiI GAAGAC 2 cut(s) 802, 1096
BplI GAGNNNNNCTC 2 cut(s) 639, 671
Bpu1102I GCTNAGC 1 cut(s) 1419
BpuMI CCSGG 2 cut(s) 176, 1487
BsaAI YACGTR 3 cut(s) 183, 541, 1600
BsaBI GATNNNNATC 1 cut(s) 470
BsaJI CCNNGG 3 cut(s) 1003, 1485, 1551
Bsc4I CCNNNNNNNGG 9 cut(s) 110, 461, 649, 664, 708, 840, 1263, 1348, 1760
Bse118I RCCGGY 1 cut(s) 341
Bse1I ACTGG 2 cut(s) 175, 225
Bse3DI GCAATG 2 cut(s) 1268, 1796
Bse8I GATNNNNATC 1 cut(s) 470
BseBI CCWGG 1 cut(s) 1151
BseDI CCNNGG 3 cut(s) 1003, 1485, 1551
BseGI GGATG 6 cut(s) 31, 389, 514, 1172, 1591, 1732
BseJI GATNNNNATC 1 cut(s) 470
BseLI CCNNNNNNNGG 9 cut(s) 110, 461, 649, 664, 708, 840, 1263, 1348, 1760
BseMI GCAATG 2 cut(s) 1268, 1796
BseMII CTCAG 4 cut(s) 139, 635, 759, 1460
BseNI ACTGG 2 cut(s) 175, 225
BseRI GAGGAG 3 cut(s) 475, 764, 787
BseSI GKGCMC 1 cut(s) 703
BseXI GCAGC 5 cut(s) 977, 1037, 1233, 1636, 1667
BsgI GTGCAG 1 cut(s) 1036
BshFI GGCC 8 cut(s) 174, 454, 519, 614, 794, 1002, 1298, 1550
BsiHKAI GWGCWC 1 cut(s) 1092
BsiHKCI CYCGRG 1 cut(s) 702
BsiSI CCGG 4 cut(s) 175, 342, 1487, 1638
BslFI GGGAC 3 cut(s) 221, 1061, 1480
BslI CCNNNNNNNGG 9 cut(s) 110, 461, 649, 664, 708, 840, 1263, 1348, 1760
BsmAI GTCTC 1 cut(s) 1325
BsmBI CGTCTC 1 cut(s) 1325
BsmFI GGGAC 3 cut(s) 221, 1061, 1480
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 8 cut(s) 174, 454, 519, 614, 794, 1002, 1298, 1550
BsoBI CYCGRG 1 cut(s) 702
Bsp1286I GDGCHC 2 cut(s) 703, 1092
Bsp143I GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
Bsp1720I GCTNAGC 1 cut(s) 1419
BspACI CCGC 7 cut(s) 99, 166, 709, 1132, 1433, 1604, 1760
BspANI GGCC 8 cut(s) 174, 454, 519, 614, 794, 1002, 1298, 1550
BspCNI CTCAG 4 cut(s) 138, 636, 758, 1459
BspHI TCATGA 2 cut(s) 379, 1174
BspLI GGNNCC 4 cut(s) 444, 793, 1148, 1431
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 5 cut(s) 437, 450, 473, 1424, 1437
BsrBI CCGCTC 2 cut(s) 101, 709
BsrDI GCAATG 2 cut(s) 1268, 1796
BsrFI RCCGGY 1 cut(s) 341
BsrI ACTGG 2 cut(s) 175, 225
BssAI RCCGGY 1 cut(s) 341
BssECI CCNNGG 3 cut(s) 1003, 1485, 1551
BssMI GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
BssSI CACGAG 1 cut(s) 1424
BssT1I CCWWGG 2 cut(s) 1003, 1551
Bst2BI CACGAG 1 cut(s) 1424
Bst2UI CCWGG 1 cut(s) 1151
Bst4CI ACNGT 4 cut(s) 262, 524, 580, 1057
Bst6I CTCTTC 2 cut(s) 764, 1061
BstAPI GCANNNNNTGC 1 cut(s) 931
BstBAI YACGTR 3 cut(s) 183, 541, 1600
BstC8I GCNNGC 1 cut(s) 927
BstDEI CTNAG 6 cut(s) 125, 644, 745, 1395, 1419, 1446
BstENI CCTNNNNNAGG 2 cut(s) 108, 647
BstF5I GGATG 6 cut(s) 31, 389, 514, 1172, 1591, 1732
BstKTI GATC 9 cut(s) 135, 148, 352, 445, 468, 740, 916, 1045, 1432
BstMAI GTCTC 1 cut(s) 1325
BstMBI GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
BstMWI GCNNNNNNNGC 4 cut(s) 171, 185, 221, 931
BstNI CCWGG 1 cut(s) 1151
BstNSI RCATGY 3 cut(s) 1213, 1531, 1566
BstPAI GACNNNNGTC 2 cut(s) 60, 1337
BstSCI CCNGG 3 cut(s) 174, 1149, 1485
BstSFI CTRYAG 3 cut(s) 149, 909, 1653
BstSLI GKGCMC 1 cut(s) 703
BstSNI TACGTA 1 cut(s) 183
BstV1I GCAGC 5 cut(s) 977, 1037, 1233, 1636, 1667
BstV2I GAAGAC 2 cut(s) 802, 1096
BstX2I RGATCY 5 cut(s) 145, 442, 913, 1042, 1429
BstXI CCANNNNNNTGG 1 cut(s) 438
BstYI RGATCY 5 cut(s) 145, 442, 913, 1042, 1429
BsuRI GGCC 8 cut(s) 174, 454, 519, 614, 794, 1002, 1298, 1550
BtrI CACGTC 1 cut(s) 1335
BtsCI GGATG 6 cut(s) 31, 389, 514, 1172, 1591, 1732
BtsIMutI CAGTG 5 cut(s) 58, 168, 258, 529, 576
Cac8I GCNNGC 1 cut(s) 927
CaiI CAGNNNCTG 2 cut(s) 806, 1061
CciI TCATGA 2 cut(s) 379, 1174
Cfr10I RCCGGY 1 cut(s) 341
Cfr13I GGNCC 1 cut(s) 792
CsiI ACCWGGT 1 cut(s) 1149
Csp6I GTAC 5 cut(s) 542, 759, 1276, 1630, 1728
CspCI CAANNNNNGTGG 2 cut(s) 1440, 1475
CviQI GTAC 5 cut(s) 542, 759, 1276, 1630, 1728
DdeI CTNAG 6 cut(s) 125, 644, 745, 1395, 1419, 1446
DpnI GATC 9 cut(s) 134, 147, 351, 444, 467, 739, 915, 1044, 1431
DpnII GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
EaeI YGGCCR 5 cut(s) 172, 452, 517, 612, 1296
Eam1104I CTCTTC 2 cut(s) 764, 1061
EarI CTCTTC 2 cut(s) 764, 1061
Eco105I TACGTA 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 1003, 1551
Eco32I GATATC 1 cut(s) 1354
Eco57I CTGAAG 2 cut(s) 28, 93
Eco72I CACGTG 1 cut(s) 1600
Eco88I CYCGRG 1 cut(s) 702
EcoNI CCTNNNNNAGG 2 cut(s) 108, 647
EcoRI GAATTC 1 cut(s) 1592
EcoRII CCWGG 1 cut(s) 1149
EcoRV GATATC 1 cut(s) 1354
EcoT14I CCWWGG 2 cut(s) 1003, 1551
EcoT22I ATGCAT 1 cut(s) 1207
ErhI CCWWGG 2 cut(s) 1003, 1551
Esp3I CGTCTC 1 cut(s) 1325
FalI AAGNNNNNCTT 2 cut(s) 1561, 1593
FaqI GGGAC 3 cut(s) 221, 1061, 1480
FauI CCCGC 1 cut(s) 1753
FauNDI CATATG 2 cut(s) 592, 836
Fnu4HI GCNGC 9 cut(s) 99, 166, 966, 1051, 1132, 1222, 1604, 1625, 1656
FokI GGATG 6 cut(s) 18, 376, 521, 1179, 1598, 1719
Fsp4HI GCNGC 9 cut(s) 99, 166, 966, 1051, 1132, 1222, 1604, 1625, 1656
FspBI CTAG 5 cut(s) 353, 998, 1046, 1248, 1512
GluI GCNGC 9 cut(s) 99, 166, 966, 1051, 1132, 1222, 1604, 1625, 1656
HaeIII GGCC 8 cut(s) 174, 454, 519, 614, 794, 1002, 1298, 1550
HapII CCGG 4 cut(s) 175, 342, 1487, 1638
HindIII AAGCTT 1 cut(s) 1397
HinfI GANTC 8 cut(s) 209, 820, 890, 1032, 1071, 1082, 1444, 1520
HpaII CCGG 4 cut(s) 175, 342, 1487, 1638
HphI GGTGA 4 cut(s) 104, 296, 359, 1415
Hpy166II GTNNAC 3 cut(s) 316, 1278, 1728
Hpy188I TCNGA 5 cut(s) 737, 748, 1087, 1449, 1525
Hpy188III TCNNGA 9 cut(s) 65, 111, 380, 784, 1175, 1248, 1390, 1441, 1583
Hpy8I GTNNAC 3 cut(s) 316, 1278, 1728
HpyAV CCTTC 6 cut(s) 52, 83, 114, 526, 987, 1563
HpyCH4III ACNGT 4 cut(s) 262, 524, 580, 1057
HpyCH4IV ACGT 5 cut(s) 182, 459, 540, 1334, 1599
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 185, 221, 931
HpyF3I CTNAG 6 cut(s) 125, 644, 745, 1395, 1419, 1446
HpySE526I ACGT 5 cut(s) 182, 459, 540, 1334, 1599
Kzo9I GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
LmnI GCTCC 1 cut(s) 106
Lsp1109I GCAGC 5 cut(s) 977, 1037, 1233, 1636, 1667
LweI GCATC 7 cut(s) 57, 58, 85, 398, 499, 1243, 1315
MabI ACCWGGT 1 cut(s) 1149
MaeI CTAG 5 cut(s) 353, 998, 1046, 1248, 1512
MaeII ACGT 5 cut(s) 182, 459, 540, 1334, 1599
MaeIII GTNAC 3 cut(s) 53, 667, 1475
MalI GATC 9 cut(s) 134, 147, 351, 444, 467, 739, 915, 1044, 1431
MbiI CCGCTC 2 cut(s) 101, 709
MboI GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
MfeI CAATTG 1 cut(s) 672
MflI RGATCY 5 cut(s) 145, 442, 913, 1042, 1429
MhlI GDGCHC 2 cut(s) 703, 1092
MlsI TGGCCA 3 cut(s) 454, 614, 1298
MluNI TGGCCA 3 cut(s) 454, 614, 1298
MlyI GAGTC 4 cut(s) 203, 884, 1438, 1529
MmeI TCCRAC 2 cut(s) 43, 1356
Mox20I TGGCCA 3 cut(s) 454, 614, 1298
Mph1103I ATGCAT 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 1103
MscI TGGCCA 3 cut(s) 454, 614, 1298
MseI TTAA 4 cut(s) 362, 755, 1136, 1709
MslI CAYNNNNRTG 2 cut(s) 885, 1323
Msp20I TGGCCA 3 cut(s) 454, 614, 1298
MspA1I CMGCKG 2 cut(s) 1627, 1658
MspI CCGG 4 cut(s) 175, 342, 1487, 1638
MspR9I CCNGG 3 cut(s) 176, 1151, 1487
MunI CAATTG 1 cut(s) 672
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 1 cut(s) 1151
MwoI GCNNNNNNNGC 4 cut(s) 171, 185, 221, 931
NciI CCSGG 2 cut(s) 176, 1487
NdeI CATATG 2 cut(s) 592, 836
NdeII GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
NlaIV GGNNCC 4 cut(s) 444, 793, 1148, 1431
NmeAIII GCCGAG 1 cut(s) 495
NmuCI GTSAC 1 cut(s) 53
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 3 cut(s) 1213, 1531, 1566
PagI TCATGA 2 cut(s) 379, 1174
PciI ACATGT 1 cut(s) 1527
PctI GAATGC 1 cut(s) 718
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 4 cut(s) 820, 1032, 1071, 1082
PflMI CCANNNNNTGG 2 cut(s) 461, 840
PkrI GCNGC 9 cut(s) 100, 167, 967, 1052, 1133, 1223, 1605, 1626, 1657
PleI GAGTC 4 cut(s) 203, 884, 1438, 1528
PmaCI CACGTG 1 cut(s) 1600
PmlI CACGTG 1 cut(s) 1600
PpsI GAGTC 4 cut(s) 203, 884, 1438, 1528
Ppu21I YACGTR 3 cut(s) 183, 541, 1600
PscI ACATGT 1 cut(s) 1527
PshAI GACNNNNGTC 2 cut(s) 60, 1337
PsiI TTATAA 1 cut(s) 1026
Psp6I CCWGG 1 cut(s) 1149
PspCI CACGTG 1 cut(s) 1600
PspGI CCWGG 1 cut(s) 1149
PspN4I GGNNCC 4 cut(s) 444, 793, 1148, 1431
PspPI GGNCC 1 cut(s) 792
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 2 cut(s) 806, 1061
PsuI RGATCY 5 cut(s) 145, 442, 913, 1042, 1429
PvuII CAGCTG 2 cut(s) 1627, 1658
RsaI GTAC 5 cut(s) 543, 760, 1277, 1631, 1729
RsaNI GTAC 5 cut(s) 542, 759, 1276, 1630, 1728
RseI CAYNNNNRTG 2 cut(s) 885, 1323
SaqAI TTAA 4 cut(s) 362, 755, 1136, 1709
SatI GCNGC 9 cut(s) 99, 166, 966, 1051, 1132, 1222, 1604, 1625, 1656
Sau3AI GATC 9 cut(s) 132, 145, 349, 442, 465, 737, 913, 1042, 1429
Sau96I GGNCC 1 cut(s) 792
SchI GAGTC 4 cut(s) 203, 884, 1438, 1529
ScrFI CCNGG 3 cut(s) 176, 1151, 1487
SduI GDGCHC 2 cut(s) 703, 1092
SexAI ACCWGGT 1 cut(s) 1149
SfaNI GCATC 7 cut(s) 57, 58, 85, 398, 499, 1243, 1315
SfcI CTRYAG 3 cut(s) 149, 909, 1653
SmiMI CAYNNNNRTG 2 cut(s) 885, 1323
SnaBI TACGTA 1 cut(s) 183
SsiI CCGC 7 cut(s) 99, 166, 709, 1132, 1433, 1604, 1760
SspMI CTAG 5 cut(s) 353, 998, 1046, 1248, 1512
StyD4I CCNGG 3 cut(s) 174, 1149, 1485
StyI CCWWGG 2 cut(s) 1003, 1551
TaaI ACNGT 4 cut(s) 262, 524, 580, 1057
TaiI ACGT 5 cut(s) 185, 462, 543, 1337, 1602
TaqI TCGA 2 cut(s) 64, 255
TatI WGTACW 1 cut(s) 1727
TauI GCSGC 4 cut(s) 101, 168, 1134, 1606
TfiI GAWTC 4 cut(s) 820, 1032, 1071, 1082
Tru1I TTAA 4 cut(s) 362, 755, 1136, 1709
Tru9I TTAA 4 cut(s) 362, 755, 1136, 1709
TscAI CASTG 5 cut(s) 58, 175, 265, 529, 583
TseFI GTSAC 1 cut(s) 53
TseI GCWGC 5 cut(s) 965, 1050, 1221, 1624, 1655
Tsp45I GTSAC 1 cut(s) 53
TspRI CASTG 5 cut(s) 58, 175, 265, 529, 583
Van91I CCANNNNNTGG 2 cut(s) 461, 840
XagI CCTNNNNNAGG 2 cut(s) 108, 647
XapI RAATTY 2 cut(s) 1592, 1678
XbaI TCTAGA 1 cut(s) 1247
XceI RCATGY 3 cut(s) 1213, 1531, 1566
XcmI CCANNNNNNNNNTGG 1 cut(s) 841
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 5 cut(s) 353, 998, 1046, 1248, 1512
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.