Rroxscaffold_1G00047540

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67150915 .. 67152003
1089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047540.1

Sequence Viewer

Length: 1089 bp
ATGAAGACAGGAGTCATAGGACTAGTCCTTGGGATGGGTATTGGTGGATGTGTTATCTTGATGGTTGGGTTTGTTTTCCTTTGCTTCTCGTCGAGGAAAAAGAGAGCAACAGAAGAATCAGCTGATACAAATCCTATGTTTGATGAATTTAATGATGTTGAACTTGAGATGGATCAAATTCCCAGGAAATTTTTGTACAGTGAGTTAGCTCGCGCAACCAGAAATTTCGCTGACAGAGAAAAAGTTGGTGGAGGAGGATTTGATGGAGTTTATAGAGGCTTCATAGAAGACTTGAAGTCATATGTTGCCGTTAAGAGAATATCCATAGAGTCTAGCCAAGGACTAAAGGAGTATGAAGCTGAAGTGAAGATCATCAGTCGTCTCCGGCATCGAAATCTTGTGCAACTCATCGGTTGGTGCCACTACGAAGGACAACTCCTACTTGTTTACAAGTTCATACCCAACGGCAGCTTGGATTCTCATCTATACAAGGGAAACCGCTCGTTGACATGGGAAGTAAGATATAGAATTGCTCAAGGATTGGCGTCTGCGTTGTTCTATCTACACGAAGAATCAGTGCGTTGTGTACTGCACTGGAATATTAAATCCAGTAACGTCATGTTGGATTCGAATTTCAACGCCAAACTCGGAGATTTTGGGTTAGCACGATTCGTGGACCATGAAAAAGAGCTGCAAACAACTTCCCTGAGAGGAACTATGAGCTACATGGCTCCGGAATATGTTATTACGGGGATGGCTAGCAAGAGAACAGAAGTCTACAGCTTCGGAATAATTTGCCTGGAGATTGCCTGCGGAAGAAAACTCATCGATCTCAAGTCTGTCAATATGGGCGATTGGGTTTGGCAGCTCTATGATGAAGAGAAGAAGGTTACTGAAGCAGCCGACCCAAAACTCTGTGGAAATTATGATGAGAAACAAATGGAGTGTTTGATGATTGTTGGACTGTGGTGTGCTCATCCCGATTACAAAATGAGGCCTTCGATACAACGGGTAATCCAAGTGCTAAATTTCGAGATTCCATTGCCCATCTTTCAATCCAAGACGCCTGTGGCAACCAACTCTACATGA

Protein Analysis

362

Amino Acids

41.22

Weight (kDa)

7.03

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 77 - 340 1.7e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 80 - 341 3.8e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 417
AccBSI CCGCTC 1 cut(s) 501
AccI GTMKAC 1 cut(s) 777
AccII CGCG 1 cut(s) 213
AccIII TCCGGA 1 cut(s) 733
AciI CCGC 2 cut(s) 499, 813
AclWI GGATC 1 cut(s) 180
AcsI RAATTY 6 cut(s) 146, 177, 188, 223, 631, 1027
AcuI CTGAAG 2 cut(s) 381, 915
AcyI GRCGYC 2 cut(s) 545, 1064
AfaI GTAC 2 cut(s) 197, 588
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 4 cut(s) 161, 295, 637, 1055
AhdI GACNNNNNGTC 1 cut(s) 295
AhlI ACTAGT 1 cut(s) 22
AjnI CCWGG 2 cut(s) 182, 798
AluBI AGCT 8 cut(s) 122, 209, 359, 471, 691, 723, 783, 868
AluI AGCT 8 cut(s) 122, 209, 359, 471, 691, 723, 783, 868
Alw21I GWGCWC 1 cut(s) 976
Alw26I GTCTC 1 cut(s) 386
AlwI GGATC 1 cut(s) 180
Aor13HI TCCGGA 1 cut(s) 733
AoxI GGCC 1 cut(s) 995
ApeKI GCWGC 4 cut(s) 468, 691, 865, 899
ApoI RAATTY 6 cut(s) 146, 177, 188, 223, 631, 1027
AspLEI GCGC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 676
AsuII TTCGAA 1 cut(s) 629
AsuNHI GCTAGC 1 cut(s) 758
AvaII GGWCC 1 cut(s) 676
BanI GGYRCC 1 cut(s) 417
BbsI GAAGAC 2 cut(s) 11, 294
Bbv12I GWGCWC 1 cut(s) 976
BbvI GCAGC 4 cut(s) 480, 678, 877, 911
BccI CCATC 6 cut(s) 28, 55, 163, 257, 748, 1055
BceAI ACGGC 2 cut(s) 293, 481
BciT130I CCWGG 2 cut(s) 184, 800
BcoDI GTCTC 1 cut(s) 386
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 3 cut(s) 23, 333, 759
BfmI CTRYAG 1 cut(s) 778
BisI GCNGC 4 cut(s) 469, 692, 866, 900
BlsI GCNGC 4 cut(s) 470, 693, 867, 901
Bme1390I CCNGG 2 cut(s) 184, 800
Bme18I GGWCC 1 cut(s) 676
BmeRI GACNNNNNGTC 1 cut(s) 295
BmgT120I GGNCC 1 cut(s) 676
BmiI GGNNCC 2 cut(s) 419, 732
BmrFI CCNGG 2 cut(s) 184, 800
BmsI GCATC 1 cut(s) 397
BmtI GCTAGC 1 cut(s) 762
BoxI GACNNNNGTC 1 cut(s) 11
BpiI GAAGAC 2 cut(s) 11, 294
BpmI CTGGAG 1 cut(s) 821
Bpu14I TTCGAA 1 cut(s) 629
BpuEI CTTGAG 3 cut(s) 185, 519, 818
Bsa29I ATCGAT 1 cut(s) 828
BsaBI GATNNNNATC 2 cut(s) 129, 480
BsaHI GRCGYC 2 cut(s) 545, 1064
BsaJI CCNNGG 3 cut(s) 28, 182, 337
BsaWI WCCGGW 1 cut(s) 733
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 2 cut(s) 599, 609
Bse3DI GCAATG 1 cut(s) 1040
Bse8I GATNNNNATC 2 cut(s) 129, 480
BseAI TCCGGA 1 cut(s) 733
BseBI CCWGG 2 cut(s) 184, 800
BseCI ATCGAT 1 cut(s) 828
BseDI CCNNGG 3 cut(s) 28, 182, 337
BseGI GGATG 4 cut(s) 39, 53, 759, 976
BseJI GATNNNNATC 2 cut(s) 129, 480
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 1040
BseMII CTCAG 1 cut(s) 698
BseNI ACTGG 2 cut(s) 599, 609
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 4 cut(s) 480, 678, 877, 911
BsgI GTGCAG 1 cut(s) 575
Bsh1236I CGCG 1 cut(s) 213
BshFI GGCC 1 cut(s) 997
BshNI GGYRCC 1 cut(s) 417
BshVI ATCGAT 1 cut(s) 828
BsiHKAI GWGCWC 1 cut(s) 976
BsiSI CCGG 2 cut(s) 385, 734
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 1 cut(s) 386
BsmBI CGTCTC 1 cut(s) 386
BsnI GGCC 1 cut(s) 997
Bsp119I TTCGAA 1 cut(s) 629
Bsp1286I GDGCHC 1 cut(s) 976
Bsp13I TCCGGA 1 cut(s) 733
Bsp1407I TGTACA 1 cut(s) 195
Bsp143I GATC 3 cut(s) 172, 369, 829
BspACI CCGC 2 cut(s) 499, 813
BspANI GGCC 1 cut(s) 997
BspCNI CTCAG 1 cut(s) 699
BspDI ATCGAT 1 cut(s) 828
BspEI TCCGGA 1 cut(s) 733
BspFNI CGCG 1 cut(s) 213
BspLI GGNNCC 2 cut(s) 419, 732
BspOI GCTAGC 1 cut(s) 762
BspPI GGATC 1 cut(s) 180
BspT104I TTCGAA 1 cut(s) 629
BspT107I GGYRCC 1 cut(s) 417
BsrBI CCGCTC 1 cut(s) 501
BsrDI GCAATG 1 cut(s) 1040
BsrGI TGTACA 1 cut(s) 195
BsrI ACTGG 2 cut(s) 599, 609
BssECI CCNNGG 3 cut(s) 28, 182, 337
BssMI GATC 3 cut(s) 172, 369, 829
BssNI GRCGYC 2 cut(s) 545, 1064
BssT1I CCWWGG 2 cut(s) 28, 337
Bst2UI CCWGG 2 cut(s) 184, 800
Bst4CI ACNGT 2 cut(s) 200, 966
Bst6I CTCTTC 1 cut(s) 873
BstACI GRCGYC 2 cut(s) 545, 1064
BstAUI TGTACA 1 cut(s) 195
BstBI TTCGAA 1 cut(s) 629
BstC8I GCNNGC 3 cut(s) 211, 760, 811
BstDEI CTNAG 1 cut(s) 707
BstF5I GGATG 4 cut(s) 39, 53, 759, 976
BstFNI CGCG 1 cut(s) 213
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 3 cut(s) 175, 372, 832
BstMAI GTCTC 1 cut(s) 386
BstMBI GATC 3 cut(s) 172, 369, 829
BstNI CCWGG 2 cut(s) 184, 800
BstPAI GACNNNNGTC 1 cut(s) 11
BstSCI CCNGG 2 cut(s) 182, 798
BstSFI CTRYAG 1 cut(s) 778
BstUI CGCG 1 cut(s) 213
BstV1I GCAGC 4 cut(s) 480, 678, 877, 911
BstV2I GAAGAC 2 cut(s) 11, 294
Bsu15I ATCGAT 1 cut(s) 828
BsuRI GGCC 1 cut(s) 997
BsuTUI ATCGAT 1 cut(s) 828
BtsCI GGATG 4 cut(s) 39, 53, 759, 976
BtsIMutI CAGTG 3 cut(s) 205, 582, 592
Cac8I GCNNGC 3 cut(s) 211, 760, 811
CfoI GCGC 1 cut(s) 215
Cfr13I GGNCC 1 cut(s) 676
ClaI ATCGAT 1 cut(s) 828
CseI GACGC 2 cut(s) 534, 1072
Csp6I GTAC 2 cut(s) 196, 587
CviAII CATG 5 cut(s) 510, 619, 680, 727, 1086
CviQI GTAC 2 cut(s) 196, 587
DdeI CTNAG 1 cut(s) 707
DpnI GATC 3 cut(s) 174, 371, 831
DpnII GATC 3 cut(s) 172, 369, 829
DriI GACNNNNNGTC 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 873
Eam1105I GACNNNNNGTC 1 cut(s) 295
EarI CTCTTC 1 cut(s) 873
Eco130I CCWWGG 2 cut(s) 28, 337
Eco147I AGGCCT 1 cut(s) 997
Eco47I GGWCC 1 cut(s) 676
Eco57I CTGAAG 2 cut(s) 381, 915
EcoRII CCWGG 2 cut(s) 182, 798
EcoT14I CCWWGG 2 cut(s) 28, 337
ErhI CCWWGG 2 cut(s) 28, 337
Esp3I CGTCTC 1 cut(s) 386
FaeI CATG 5 cut(s) 513, 622, 683, 730, 1089
FatI CATG 5 cut(s) 509, 618, 679, 726, 1085
FauNDI CATATG 1 cut(s) 301
FblI GTMKAC 1 cut(s) 777
Fnu4HI GCNGC 4 cut(s) 469, 692, 866, 900
FokI GGATG 4 cut(s) 46, 60, 766, 963
Fsp4HI GCNGC 4 cut(s) 469, 692, 866, 900
FspBI CTAG 3 cut(s) 23, 333, 759
GlaI GCGC 1 cut(s) 214
GluI GCNGC 4 cut(s) 469, 692, 866, 900
GsuI CTGGAG 1 cut(s) 821
HaeIII GGCC 1 cut(s) 997
HapII CCGG 2 cut(s) 385, 734
HgaI GACGC 2 cut(s) 534, 1072
HhaI GCGC 1 cut(s) 215
Hin1I GRCGYC 2 cut(s) 545, 1064
Hin1II CATG 5 cut(s) 513, 622, 683, 730, 1089
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HinfI GANTC 8 cut(s) 12, 116, 329, 476, 572, 626, 669, 1036
HpaII CCGG 2 cut(s) 385, 734
Hpy166II GTNNAC 5 cut(s) 448, 507, 587, 676, 778
Hpy188I TCNGA 2 cut(s) 650, 788
Hpy188III TCNNGA 4 cut(s) 58, 734, 980, 1033
Hpy8I GTNNAC 5 cut(s) 448, 507, 587, 676, 778
Hpy99I CGWCG 1 cut(s) 94
HpyAV CCTTC 3 cut(s) 422, 880, 1008
HpyCH4III ACNGT 2 cut(s) 200, 966
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 3 cut(s) 403, 592, 694
HpyF3I CTNAG 1 cut(s) 707
HpySE526I ACGT 1 cut(s) 615
Hsp92I GRCGYC 2 cut(s) 545, 1064
Hsp92II CATG 5 cut(s) 513, 622, 683, 730, 1089
HspAI GCGC 1 cut(s) 213
Kpn2I TCCGGA 1 cut(s) 733
Kzo9I GATC 3 cut(s) 172, 369, 829
LmnI GCTCC 1 cut(s) 736
Lsp1109I GCAGC 4 cut(s) 480, 678, 877, 911
LweI GCATC 1 cut(s) 397
MaeI CTAG 3 cut(s) 23, 333, 759
MaeII ACGT 1 cut(s) 615
MaeIII GTNAC 2 cut(s) 611, 889
MalI GATC 3 cut(s) 174, 371, 831
MbiI CCGCTC 1 cut(s) 501
MboI GATC 3 cut(s) 172, 369, 829
MboII GAAGA 8 cut(s) 16, 125, 299, 379, 581, 828, 890, 895
MhlI GDGCHC 1 cut(s) 976
MluCI AATT 9 cut(s) 146, 177, 188, 223, 528, 631, 792, 922, 1027
MlyI GAGTC 2 cut(s) 21, 338
MmeI TCCRAC 2 cut(s) 603, 940
MnlI CCTC 6 cut(s) 87, 245, 248, 269, 704, 987
MroI TCCGGA 1 cut(s) 733
MseI TTAA 3 cut(s) 150, 312, 603
MspA1I CMGCKG 1 cut(s) 122
MspI CCGG 2 cut(s) 385, 734
MspR9I CCNGG 2 cut(s) 184, 800
MvaI CCWGG 2 cut(s) 184, 800
MvnI CGCG 1 cut(s) 213
NdeI CATATG 1 cut(s) 301
NdeII GATC 3 cut(s) 172, 369, 829
NheI GCTAGC 1 cut(s) 758
NlaIII CATG 5 cut(s) 513, 622, 683, 730, 1089
NlaIV GGNNCC 2 cut(s) 419, 732
NspV TTCGAA 1 cut(s) 629
PceI AGGCCT 1 cut(s) 997
PfeI GAWTC 6 cut(s) 116, 476, 572, 626, 669, 1036
PkrI GCNGC 4 cut(s) 470, 693, 867, 901
PleI GAGTC 2 cut(s) 20, 337
PpsI GAGTC 2 cut(s) 20, 337
PshAI GACNNNNGTC 1 cut(s) 11
Psp6I CCWGG 2 cut(s) 182, 798
PspGI CCWGG 2 cut(s) 182, 798
PspN4I GGNNCC 2 cut(s) 419, 732
PspPI GGNCC 1 cut(s) 676
PvuII CAGCTG 1 cut(s) 122
RsaI GTAC 2 cut(s) 197, 588
RsaNI GTAC 2 cut(s) 196, 587
SaqAI TTAA 3 cut(s) 150, 312, 603
SatI GCNGC 4 cut(s) 469, 692, 866, 900
Sau3AI GATC 3 cut(s) 172, 369, 829
Sau96I GGNCC 1 cut(s) 676
SchI GAGTC 2 cut(s) 21, 338
ScrFI CCNGG 2 cut(s) 184, 800
SduI GDGCHC 1 cut(s) 976
SfaNI GCATC 1 cut(s) 397
SfcI CTRYAG 1 cut(s) 778
SfuI TTCGAA 1 cut(s) 629
SinI GGWCC 1 cut(s) 676
SmlI CTYRAG 3 cut(s) 164, 534, 833
SmoI CTYRAG 3 cut(s) 164, 534, 833
SpeI ACTAGT 1 cut(s) 22
Sse9I AATT 9 cut(s) 146, 177, 188, 223, 528, 631, 792, 922, 1027
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 2 cut(s) 499, 813
SspI AATATT 1 cut(s) 601
SspMI CTAG 3 cut(s) 23, 333, 759
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 2 cut(s) 182, 798
StyI CCWWGG 2 cut(s) 28, 337
TaaI ACNGT 2 cut(s) 200, 966
TaiI ACGT 1 cut(s) 618
TaqI TCGA 6 cut(s) 92, 391, 629, 828, 1001, 1032
TasI AATT 9 cut(s) 146, 177, 188, 223, 528, 631, 792, 922, 1027
TatI WGTACW 2 cut(s) 195, 586
TfiI GAWTC 6 cut(s) 116, 476, 572, 626, 669, 1036
Tru1I TTAA 3 cut(s) 150, 312, 603
Tru9I TTAA 3 cut(s) 150, 312, 603
TscAI CASTG 3 cut(s) 205, 582, 599
TseI GCWGC 4 cut(s) 468, 691, 865, 899
TspDTI ATGAA 7 cut(s) 17, 159, 271, 369, 445, 696, 891
TspRI CASTG 3 cut(s) 205, 582, 599
VpaK11BI GGWCC 1 cut(s) 676
XapI RAATTY 6 cut(s) 146, 177, 188, 223, 631, 1027
XcmI CCANNNNNNNNNTGG 2 cut(s) 469, 1066
XmiI GTMKAC 1 cut(s) 777
XspI CTAG 3 cut(s) 23, 333, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.