Rh6CG073600

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000038
Physical Location & Seq
Reverse (-)
7578067 .. 7611074
33008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG073600.1

Sequence Viewer

Length: 1734 bp
ATGACCACCTCCTACCAGTCACTCTGCCGGACCGCCGCCCTCATCGATCCACCATCCCTGTTAGACCAGAGAGGAGCGCCACTGATTCCAATCCACCTGCTCGCCATGACGAAATCAGTAGACCCCAAACTGATCGGGTTCCAATCAGATCGGAGAACAACTGATCCCAACCGGCAACCCACCTTAGTACAAACAACATACTCTACGAAGGTGCTGCAGCCAAGCCTTCGAGAGTCATATAGCAAGGATCATTTCAGCGTTGGCCGGGCCACATATGCTGAGCCTTTGCACTTATGGGACTCCAGGTCGCAGGCAGACTTCACTACTAATTTCTCATTTGTTGTCGACACTCTTAACGATTCCCGCTCTGGTGATGGATTTGCCTTTTTTCTTGCTCCTATTCACTTTCCCATTCCACCTAACTCAGCTGGTGCTTATCTAGGAATGTTCAACACCTCCACACGTTTTGAACCATCAATGAATCAAATTGTAATGGTTGAGTTCGACACCAAGTTCGATAAATGGGTTGATCCACATGGACAACACGTTGGGATCGATGTCAACACCCTTTGCTCAGTTGTTAATGCGAGTTGGAATGCAAGCAGCAATAGTGGGAAGGAGGGTTATGTACGGATAAGTTACAATTCTACTACCCAAAACTTCAGTGTGTATTGGACATATAATGAAAGTCAACATAACCCTGTTTTTGCATGGAACTCTTCTCTTTCTTATCCTATTGACCTTAGAAAGGTGCTTCCTGAGTGGGTTAGAATTGGTTTTTCAGCTTCTACAGGATTCGGTCTGGAGCGCTACTCTATAAAATCATGGGAATTCAGTTCAAATTTGGATTCTGATGAAAGGATTGTTAAATGGAAGAAGACAACCTTGATTGTGGTTGTTGTAGTTTCCTTCTCCGTTCTAATGATTTTTGTACCTATGTGCTGGTTTCTAGTAAGGAAGAGAATGAAAAGGATTTTTGGAAATAATTACTTCAATGATGGGCAAAAATCTATGAATATAGATCTTGAGAGATTAGCCTTGCCAAGACAATTTACTTACCAAGAATTATTTGTGGCCACTAATGGCTTTGCAAATGATACAAGGCTAGGCCATGGAGGATCTGGACAAGTTTATAAAGGATTCGTACAAGATGTAGGCAGTGCAGTTGCTGTCAAGAGAATCTTTGCACAATCTGAGCAGTATGAGAAAATCTTTACAAATGAAGTCAAGATAATAAGCCGCATAATACATCGACACCTGGCTTCGGGTAGGTGGGTTGGCGGGTTGCAGAGGCTGATCGAGGAGGGTGATTGGTCACTAACTGGTGGACATTTTGAGGATTTCAGCCTAGGGGGTTTTGCAGCAAGGTTTGAGGCTACGCTTGGGTATTTGATCTGGTCAGGTTCTCTAGACATCAGTGAAGGCATGTTGGTCGACCGCAGGGTGGTGGTGGATGGCTGGTGCTACCAGAATGCCAGGGCTGACGATGTAAGCAGAGGCAACGGCTTGGTGCGGCTAGGATGGGACCCTTCGGCCGTCACAGAGGAGGAGAAGAAAACGGAGAGGGAGAGAGATGGTGAGATACCTGGAGGCGGAGCCGCGGAGATGGGTTGCTGGTGGGGATTGAAAGACTGGAGTCGGTGGCCAGTGGGGCTTGAAAGGCTGGAGGCCCAGATCGGAGGCCGGAGATGGGTTGCTGGTTCTAGCCTTGCACTCTTGCAGGTTGCCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

577

Amino Acids

65.0

Weight (kDa)

6.62

Isoelectric Point (pI)

34.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 81 - 286 3.9e-58 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
AarI CACCTGC 1 cut(s) 105
Acc36I ACCTGC 2 cut(s) 105, 1711
AccBSI CCGCTC 1 cut(s) 366
AccI GTMKAC 3 cut(s) 120, 345, 1434
AccII CGCG 1 cut(s) 1601
AclWI GGATC 6 cut(s) 41, 158, 255, 524, 560, 1126
AcoI YGGCCR 4 cut(s) 262, 1074, 1533, 1643
AcsI RAATTY 2 cut(s) 830, 841
AcuI CTGAAG 1 cut(s) 646
AfaI GTAC 4 cut(s) 189, 630, 933, 1146
AfeI AGCGCT 1 cut(s) 809
AfiI CCNNNNNNNGG 5 cut(s) 748, 1264, 1444, 1592, 1690
AflIII ACRYGT 2 cut(s) 461, 544
AgsI TTSAA 6 cut(s) 451, 470, 840, 994, 1627, 1658
AhdI GACNNNNNGTC 1 cut(s) 304
AjnI CCWGG 4 cut(s) 302, 1257, 1475, 1585
AloI GAACNNNNNNTCC 2 cut(s) 148, 180
AluBI AGCT 2 cut(s) 428, 785
AluI AGCT 2 cut(s) 428, 785
AlwI GGATC 6 cut(s) 41, 158, 255, 524, 560, 1126
AlwNI CAGNNNCTG 2 cut(s) 1169, 1294
Aor51HI AGCGCT 1 cut(s) 809
AoxI GGCC 8 cut(s) 262, 267, 1074, 1108, 1533, 1643, 1668, 1681
ApeKI GCWGC 4 cut(s) 214, 217, 603, 1361
ApoI RAATTY 2 cut(s) 830, 841
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AspA2I CCTAGG 1 cut(s) 1348
AspLEI GCGC 2 cut(s) 79, 810
AspS9I GGNCC 4 cut(s) 30, 267, 1525, 1669
AsuC2I CCSGG 1 cut(s) 266
AsuHPI GGTGA 3 cut(s) 383, 1319, 1589
AvaII GGWCC 2 cut(s) 30, 1525
AvrII CCTAGG 1 cut(s) 1348
BalI TGGCCA 2 cut(s) 1076, 1645
BbsI GAAGAC 1 cut(s) 884
BbvI GCAGC 4 cut(s) 201, 229, 615, 1373
BccI CCATC 9 cut(s) 61, 368, 481, 992, 1448, 1515, 1568, 1600, 1683
BceAI ACGGC 2 cut(s) 1519, 1520
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 1414, 1448
BciT130I CCWGG 4 cut(s) 304, 1259, 1477, 1587
BcnI CCSGG 1 cut(s) 266
BfaI CTAG 7 cut(s) 440, 950, 1106, 1349, 1409, 1517, 1704
BfmI CTRYAG 2 cut(s) 215, 789
BfoI RGCGCY 2 cut(s) 80, 811
BfuAI ACCTGC 2 cut(s) 105, 1711
BglI GCCNNNNNGGC 1 cut(s) 1651
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 8 cut(s) 36, 215, 218, 604, 1240, 1362, 1514, 1599
BlnI CCTAGG 1 cut(s) 1348
BlpI GCTNAGC 1 cut(s) 279
BlsI GCNGC 8 cut(s) 37, 216, 219, 605, 1241, 1363, 1515, 1600
Bme1390I CCNGG 5 cut(s) 266, 304, 1259, 1477, 1587
Bme18I GGWCC 2 cut(s) 30, 1525
BmeRI GACNNNNNGTC 1 cut(s) 304
BmgT120I GGNCC 4 cut(s) 30, 267, 1525, 1669
BmiI GGNNCC 4 cut(s) 140, 1526, 1527, 1597
BmrFI CCNGG 5 cut(s) 266, 304, 1259, 1477, 1587
BoxI GACNNNNGTC 1 cut(s) 1635
BpiI GAAGAC 1 cut(s) 884
BplI GAGNNNNNCTC 2 cut(s) 797, 829
BpmI CTGGAG 5 cut(s) 286, 824, 1608, 1654, 1685
Bpu1102I GCTNAGC 1 cut(s) 279
BpuEI CTTGAG 1 cut(s) 1046
BpuMI CCSGG 1 cut(s) 266
Bsa29I ATCGAT 2 cut(s) 45, 555
BsaBI GATNNNNATC 1 cut(s) 89
BsaJI CCNNGG 4 cut(s) 1111, 1348, 1476, 1599
Bsc4I CCNNNNNNNGG 5 cut(s) 748, 1264, 1444, 1592, 1690
Bse118I RCCGGY 1 cut(s) 171
Bse1I ACTGG 4 cut(s) 16, 1327, 1637, 1646
Bse8I GATNNNNATC 1 cut(s) 89
BseBI CCWGG 4 cut(s) 304, 1259, 1477, 1587
BseCI ATCGAT 2 cut(s) 45, 555
BseDI CCNNGG 4 cut(s) 1111, 1348, 1476, 1599
BseGI GGATG 3 cut(s) 53, 1459, 1526
BseJI GATNNNNATC 1 cut(s) 89
BseLI CCNNNNNNNGG 5 cut(s) 748, 1264, 1444, 1592, 1690
BseMII CTCAG 5 cut(s) 270, 438, 588, 750, 1185
BseNI ACTGG 4 cut(s) 16, 1327, 1637, 1646
BseRI GAGGAG 4 cut(s) 87, 1316, 1559, 1562
BseX3I CGGCCG 1 cut(s) 1533
BseXI GCAGC 4 cut(s) 201, 229, 615, 1373
BsgI GTGCAG 1 cut(s) 1182
Bsh1236I CGCG 1 cut(s) 1601
Bsh1285I CGRYCG 2 cut(s) 1438, 1536
BshFI GGCC 8 cut(s) 264, 269, 1076, 1110, 1535, 1645, 1670, 1683
BshVI ATCGAT 2 cut(s) 45, 555
BsiEI CGRYCG 2 cut(s) 1438, 1536
BsiSI CCGG 4 cut(s) 28, 172, 265, 1684
BslFI GGGAC 2 cut(s) 311, 1538
BslI CCNNNNNNNGG 5 cut(s) 748, 1264, 1444, 1592, 1690
BsmFI GGGAC 2 cut(s) 311, 1538
BsmI GAATGC 2 cut(s) 601, 1477
BsnI GGCC 8 cut(s) 264, 269, 1076, 1110, 1535, 1645, 1670, 1683
Bsp1720I GCTNAGC 1 cut(s) 279
Bsp19I CCATGG 1 cut(s) 1111
BspANI GGCC 8 cut(s) 264, 269, 1076, 1110, 1535, 1645, 1670, 1683
BspCNI CTCAG 5 cut(s) 271, 437, 587, 751, 1186
BspDI ATCGAT 2 cut(s) 45, 555
BspFNI CGCG 1 cut(s) 1601
BspLI GGNNCC 4 cut(s) 140, 1526, 1527, 1597
BspMAI CTGCAG 1 cut(s) 219
BspMI ACCTGC 2 cut(s) 105, 1711
BspPI GGATC 6 cut(s) 41, 158, 255, 524, 560, 1126
BsrBI CCGCTC 1 cut(s) 366
BsrFI RCCGGY 1 cut(s) 171
BsrI ACTGG 4 cut(s) 16, 1327, 1637, 1646
BssAI RCCGGY 1 cut(s) 171
BssECI CCNNGG 4 cut(s) 1111, 1348, 1476, 1599
BssT1I CCWWGG 2 cut(s) 1111, 1348
Bst2UI CCWGG 4 cut(s) 304, 1259, 1477, 1587
Bst6I CTCTTC 2 cut(s) 724, 953
BstC8I GCNNGC 3 cut(s) 102, 312, 601
BstDEI CTNAG 7 cut(s) 184, 279, 424, 574, 743, 759, 1194
BstDSI CCRYGG 2 cut(s) 1111, 1599
BstENI CCTNNNNNAGG 1 cut(s) 746
BstF5I GGATG 3 cut(s) 53, 1459, 1526
BstFNI CGCG 1 cut(s) 1601
BstH2I RGCGCY 2 cut(s) 80, 811
BstHHI GCGC 2 cut(s) 79, 810
BstMCI CGRYCG 2 cut(s) 1438, 1536
BstMWI GCNNNNNNNGC 3 cut(s) 275, 1651, 1660
BstNI CCWGG 4 cut(s) 304, 1259, 1477, 1587
BstNSI RCATGY 1 cut(s) 1429
BstPAI GACNNNNGTC 1 cut(s) 1635
BstSCI CCNGG 5 cut(s) 264, 302, 1257, 1475, 1585
BstSFI CTRYAG 2 cut(s) 215, 789
BstUI CGCG 1 cut(s) 1601
BstV1I GCAGC 4 cut(s) 201, 229, 615, 1373
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 1021, 1118
BstYI RGATCY 2 cut(s) 1021, 1118
BstZI CGGCCG 1 cut(s) 1533
Bsu15I ATCGAT 2 cut(s) 45, 555
BsuRI GGCC 8 cut(s) 264, 269, 1076, 1110, 1535, 1645, 1670, 1683
BsuTUI ATCGAT 2 cut(s) 45, 555
BtgI CCRYGG 2 cut(s) 1111, 1599
BtsCI GGATG 3 cut(s) 53, 1459, 1526
BtsI GCAGTG 1 cut(s) 1165
BtsIMutI CAGTG 5 cut(s) 80, 670, 1165, 1423, 1653
BveI ACCTGC 2 cut(s) 105, 1711
Cac8I GCNNGC 3 cut(s) 102, 312, 601
CaiI CAGNNNCTG 2 cut(s) 1169, 1294
CfoI GCGC 2 cut(s) 79, 810
Cfr10I RCCGGY 1 cut(s) 171
Cfr13I GGNCC 4 cut(s) 30, 267, 1525, 1669
Cfr42I CCGCGG 1 cut(s) 1602
ClaI ATCGAT 2 cut(s) 45, 555
CpoI CGGWCCG 1 cut(s) 30
Csp6I GTAC 4 cut(s) 188, 629, 932, 1145
CspCI CAANNNNNGTGG 2 cut(s) 448, 483
CspI CGGWCCG 1 cut(s) 30
CviAII CATG 6 cut(s) 106, 536, 711, 825, 1112, 1426
CviQI GTAC 4 cut(s) 188, 629, 932, 1145
DdeI CTNAG 7 cut(s) 184, 279, 424, 574, 743, 759, 1194
DriI GACNNNNNGTC 1 cut(s) 304
EaeI YGGCCR 4 cut(s) 262, 1074, 1533, 1643
EagI CGGCCG 1 cut(s) 1533
Eam1104I CTCTTC 2 cut(s) 724, 953
Eam1105I GACNNNNNGTC 1 cut(s) 304
EarI CTCTTC 2 cut(s) 724, 953
EciI GGCGGA 1 cut(s) 1608
EclXI CGGCCG 1 cut(s) 1533
Eco130I CCWWGG 2 cut(s) 1111, 1348
Eco47I GGWCC 2 cut(s) 30, 1525
Eco47III AGCGCT 1 cut(s) 809
Eco52I CGGCCG 1 cut(s) 1533
Eco57I CTGAAG 1 cut(s) 646
EcoNI CCTNNNNNAGG 1 cut(s) 746
EcoO109I RGGNCCY 1 cut(s) 1525
EcoRI GAATTC 1 cut(s) 830
EcoRII CCWGG 4 cut(s) 302, 1257, 1475, 1585
EcoT14I CCWWGG 2 cut(s) 1111, 1348
ErhI CCWWGG 2 cut(s) 1111, 1348
FaeI CATG 6 cut(s) 109, 539, 714, 828, 1115, 1429
FalI AAGNNNNNCTT 4 cut(s) 869, 901, 1166, 1198
FaqI GGGAC 2 cut(s) 311, 1538
FatI CATG 6 cut(s) 105, 535, 710, 824, 1111, 1425
FauI CCCGC 2 cut(s) 371, 1274
FauNDI CATATG 1 cut(s) 274
FblI GTMKAC 3 cut(s) 120, 345, 1434
Fnu4HI GCNGC 8 cut(s) 36, 215, 218, 604, 1240, 1362, 1514, 1599
FokI GGATG 3 cut(s) 40, 1466, 1533
Fsp4HI GCNGC 8 cut(s) 36, 215, 218, 604, 1240, 1362, 1514, 1599
FspBI CTAG 7 cut(s) 440, 950, 1106, 1349, 1409, 1517, 1704
GlaI GCGC 2 cut(s) 78, 809
GluI GCNGC 8 cut(s) 36, 215, 218, 604, 1240, 1362, 1514, 1599
GsuI CTGGAG 5 cut(s) 286, 824, 1608, 1654, 1685
HaeII RGCGCY 2 cut(s) 80, 811
HaeIII GGCC 8 cut(s) 264, 269, 1076, 1110, 1535, 1645, 1670, 1683
HapII CCGG 4 cut(s) 28, 172, 265, 1684
HhaI GCGC 2 cut(s) 79, 810
Hin1II CATG 6 cut(s) 109, 539, 714, 828, 1115, 1429
Hin6I GCGC 2 cut(s) 77, 808
HinP1I GCGC 2 cut(s) 77, 808
HincII GTYRAC 4 cut(s) 346, 562, 692, 1435
HindII GTYRAC 4 cut(s) 346, 562, 692, 1435
HpaII CCGG 4 cut(s) 28, 172, 265, 1684
HphI GGTGA 3 cut(s) 383, 1319, 1589
Hpy166II GTNNAC 6 cut(s) 121, 346, 562, 692, 1328, 1435
Hpy188I TCNGA 5 cut(s) 148, 153, 853, 1195, 1679
Hpy188III TCNNGA 8 cut(s) 230, 758, 803, 1025, 1122, 1174, 1228, 1409
Hpy8I GTNNAC 6 cut(s) 121, 346, 562, 692, 1328, 1435
HpyAV CCTTC 6 cut(s) 202, 236, 610, 919, 1415, 1539
HpyCH4IV ACGT 2 cut(s) 463, 546
HpyF10VI GCNNNNNNNGC 3 cut(s) 275, 1651, 1660
HpyF3I CTNAG 7 cut(s) 184, 279, 424, 574, 743, 759, 1194
HpySE526I ACGT 2 cut(s) 463, 546
Hsp92II CATG 6 cut(s) 109, 539, 714, 828, 1115, 1429
HspAI GCGC 2 cut(s) 77, 808
KflI GGGWCCC 1 cut(s) 1525
KspI CCGCGG 1 cut(s) 1602
LmnI GCTCC 4 cut(s) 74, 400, 805, 1595
Lsp1109I GCAGC 4 cut(s) 201, 229, 615, 1373
MaeI CTAG 7 cut(s) 440, 950, 1106, 1349, 1409, 1517, 1704
MaeII ACGT 2 cut(s) 463, 546
MaeIII GTNAC 4 cut(s) 18, 638, 1314, 1537
MbiI CCGCTC 1 cut(s) 366
MboII GAAGA 5 cut(s) 711, 886, 889, 970, 1564
MflI RGATCY 2 cut(s) 1021, 1118
MlsI TGGCCA 2 cut(s) 1076, 1645
MluCI AATT 9 cut(s) 328, 486, 643, 771, 830, 841, 985, 1049, 1064
MluNI TGGCCA 2 cut(s) 1076, 1645
MlyI GAGTC 3 cut(s) 242, 293, 1645
MmeI TCCRAC 1 cut(s) 572
Mox20I TGGCCA 2 cut(s) 1076, 1645
MscI TGGCCA 2 cut(s) 1076, 1645
MseI TTAA 3 cut(s) 354, 582, 867
Msp20I TGGCCA 2 cut(s) 1076, 1645
MspA1I CMGCKG 2 cut(s) 428, 1601
MspI CCGG 4 cut(s) 28, 172, 265, 1684
MspR9I CCNGG 5 cut(s) 266, 304, 1259, 1477, 1587
Mva1269I GAATGC 2 cut(s) 601, 1477
MvaI CCWGG 4 cut(s) 304, 1259, 1477, 1587
MvnI CGCG 1 cut(s) 1601
MwoI GCNNNNNNNGC 3 cut(s) 275, 1651, 1660
NciI CCSGG 1 cut(s) 266
NcoI CCATGG 1 cut(s) 1111
NdeI CATATG 1 cut(s) 274
NlaIII CATG 6 cut(s) 109, 539, 714, 828, 1115, 1429
NlaIV GGNNCC 4 cut(s) 140, 1526, 1527, 1597
NmuCI GTSAC 3 cut(s) 18, 1314, 1537
NspI RCATGY 1 cut(s) 1429
PaqCI CACCTGC 1 cut(s) 105
PcsI WCGNNNNNNNCGW 1 cut(s) 552
PctI GAATGC 2 cut(s) 601, 1477
PfeI GAWTC 7 cut(s) 85, 359, 481, 795, 848, 1140, 1179
PkrI GCNGC 8 cut(s) 37, 216, 219, 605, 1241, 1363, 1515, 1600
PleI GAGTC 3 cut(s) 241, 293, 1644
PpsI GAGTC 3 cut(s) 241, 293, 1644
PpuMI RGGWCCY 1 cut(s) 1525
PshAI GACNNNNGTC 1 cut(s) 1635
PsiI TTATAA 1 cut(s) 1134
Psp5II RGGWCCY 1 cut(s) 1525
Psp6I CCWGG 4 cut(s) 302, 1257, 1475, 1585
PspGI CCWGG 4 cut(s) 302, 1257, 1475, 1585
PspN4I GGNNCC 4 cut(s) 140, 1526, 1527, 1597
PspPI GGNCC 4 cut(s) 30, 267, 1525, 1669
PspPPI RGGWCCY 1 cut(s) 1525
PstI CTGCAG 1 cut(s) 219
PstNI CAGNNNCTG 2 cut(s) 1169, 1294
PsuI RGATCY 2 cut(s) 1021, 1118
PvuII CAGCTG 1 cut(s) 428
RsaI GTAC 4 cut(s) 189, 630, 933, 1146
RsaNI GTAC 4 cut(s) 188, 629, 932, 1145
Rsr2I CGGWCCG 1 cut(s) 30
RsrII CGGWCCG 1 cut(s) 30
SacII CCGCGG 1 cut(s) 1602
SalI GTCGAC 2 cut(s) 344, 1433
SaqAI TTAA 3 cut(s) 354, 582, 867
SatI GCNGC 8 cut(s) 36, 215, 218, 604, 1240, 1362, 1514, 1599
Sau96I GGNCC 4 cut(s) 30, 267, 1525, 1669
SchI GAGTC 3 cut(s) 242, 293, 1645
ScrFI CCNGG 5 cut(s) 266, 304, 1259, 1477, 1587
SfcI CTRYAG 2 cut(s) 215, 789
Sfr303I CCGCGG 1 cut(s) 1602
SgrBI CCGCGG 1 cut(s) 1602
SinI GGWCC 2 cut(s) 30, 1525
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
Sse9I AATT 9 cut(s) 328, 486, 643, 771, 830, 841, 985, 1049, 1064
SspMI CTAG 7 cut(s) 440, 950, 1106, 1349, 1409, 1517, 1704
StyD4I CCNGG 5 cut(s) 264, 302, 1257, 1475, 1585
StyI CCWWGG 2 cut(s) 1111, 1348
TaiI ACGT 2 cut(s) 466, 549
TaqI TCGA 9 cut(s) 45, 229, 345, 504, 516, 555, 1252, 1299, 1434
TaqII GACCGA 1 cut(s) 788
TasI AATT 9 cut(s) 328, 486, 643, 771, 830, 841, 985, 1049, 1064
TatI WGTACW 1 cut(s) 187
TauI GCSGC 4 cut(s) 38, 1242, 1516, 1601
TfiI GAWTC 7 cut(s) 85, 359, 481, 795, 848, 1140, 1179
Tru1I TTAA 3 cut(s) 354, 582, 867
Tru9I TTAA 3 cut(s) 354, 582, 867
TscAI CASTG 5 cut(s) 87, 670, 1165, 1423, 1653
TseFI GTSAC 3 cut(s) 18, 1314, 1537
TseI GCWGC 4 cut(s) 214, 217, 603, 1361
Tsp45I GTSAC 3 cut(s) 18, 1314, 1537
TspDTI ATGAA 6 cut(s) 494, 699, 870, 980, 1028, 1236
TspGWI ACGGA 3 cut(s) 646, 904, 1574
TspRI CASTG 5 cut(s) 87, 670, 1165, 1423, 1653
VpaK11BI GGWCC 2 cut(s) 30, 1525
XagI CCTNNNNNAGG 1 cut(s) 746
XapI RAATTY 2 cut(s) 830, 841
XbaI TCTAGA 1 cut(s) 1408
XceI RCATGY 1 cut(s) 1429
XcmI CCANNNNNNNNNTGG 1 cut(s) 1118
XmaJI CCTAGG 1 cut(s) 1348
XmiI GTMKAC 3 cut(s) 120, 345, 1434
XspI CTAG 7 cut(s) 440, 950, 1106, 1349, 1409, 1517, 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.