Rroxscaffold_4G00299220

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
19155190 .. 19157109
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00299220.1

Sequence Viewer

Length: 1920 bp
ATGTCTCTTAAAGTCGGCTGCAGGCAGGCAACCTTTAGTCTCTTCATTTTCATCAACTTTCTTTCTCTCTTTTCTCATCCAACTTCATTTAGTATACCTCACTTCAACCCTGATACAGAGAACATACTCTACCAAGGCGATGCCAAGATTGAGTCGGGAAATGTTGAATTCAATCCAAACCTTGACATATTTCGTGTAGGGCGGTGTACTTATTCAAAACCTTTCCACCTTTGGGACTCTACTACTAAAGCTCGGTCACTGTCAAACTTCACTACCAACTTCACATTCATGATGGACACTAATGGCCAAAATAACTTCACTGATGGATTTGCCTTTTTCCTTGCACCTTTTGGCTATCCAATCCCGCCTAACTCAGCCGGGGGTGATCTAGGACTGTTCAACATCACCAATCATTTCGAGACGTCCCAAAACAAAGTTGTCCTGGTTGAGTTTGATAGCTACACAAACGAATGGGATCCTGAGGGACCTCATGTTGGGATCAATGTAAATAGTATTTCATCGGTCGTCAATGATAGGTGGGATTTTAACGTCACGAGATCAAGAAATGTGACATCTGCACAAGTAACTTTCGATGCTAGCACCTACATGCTGACTGTGTTTTGGACATACAATGAAGCTACGAGGTATGATAATTCTCTTTCTTTGAAAATCGACTTGCGAGATGTTCTTCCCGAAAAGGTTGCGATTGGTTTCTCAGCTACTACTGGAACATACCCGGAAAACCTTATTATATCTACATGGGAGTTCACTTCAGATTTAGATTCTGATGATAAAAGCAGGAAAGGGAAGCGTGCAATATTCTTGATAGTGATGATAACTGCAGTTACTTTCTTCATTTTAATGCTTGGTGTGGCCTTATATTGGCGCGTAACAAAGATCAAAAGACAGGAAAATGTTTGCTCCAATGCTGCAGTACCTTCTATAAGTAAGCATCTTGAGACACTAGCCTTTCCAAGACGATTTTCTTACCAAGAATTAGTTGCAGCTACCTTTGGCTTTGCAAATGACAGAAGGCTAGGCCACGGAGGGTCAGGACAAGTTTATAGAGGAGTCCTACAAGATCTAGGCTGCTCGGTTGCTGTGAAGAGAATCTTTGCCGACTCTGAGCACTATGAGAAAGTTTTCATCAATGAAGTGAAAATCATAAGCCGCTTGATACATAAAAACTTGGTGATGTTTATAGGATGGTGTCATGAGCAAGGCGAATGTTTACTTGTTTATGCTTACATGTCAAATAGCAGCCTTGATGCTCATCTTTTTGGCCCCAGAACAACGCTGCAATGGAATTTCAGGTACAGGATAGCTCTGGGCTTGGCCTCAGCGCTTCATTATCTACACGAAGATGCAGAGCAGTGCATCCTTCATAGGGATATTAAATCAGCAAATGTCCTTTTGGACAACGATTTTAACACTAAGCTCGGTGATTTTGGGATTGCTAAGCTCTTGGATCCTCACTTGAGGACTAGGACAACCGGGGTGGCAGGGACTTTTGGATACATGGCCCCGGAATATGCTTTTCAAGGGAGAGCAAGCAAGGAATCGGACATGTTTAGTTTTGGAGTTGTGGTTTTGGAAATTGCTTGTGGAAGGCAAACTTACCAAGATGGAGAATATCACGTGCCACTTTTTGAGTGGGTTTGGCAATCGTACCTTGCAGGAAATCTTCTCGATGTAGCTGATGAGAGATTGGATATGGAGTTTGATCCAAGTGAAATGAAGTGCTTGCTAATTGTGGGATTATGGTGCACGCACCCCAGCAACAAGGAGAGGCCTAAAGCAGGACAAGTCATGAAGGTTCTTCAGCTGGAAGCACCATTGCCGCAACTTGCACGTGATAGGCATCATGATCATCATCAATATAATGACTCTGTACCACCTGATCGTGGAACAATCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

639

Amino Acids

72.46

Weight (kDa)

5.96

Isoelectric Point (pI)

36.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 28 - 266 1.6e-59 Legume lectin domain
Pkinase PF00069 341 - 547 1.7e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 343 - 542 2.8e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 425
AccI GTMKAC 1 cut(s) 94
AccII CGCG 1 cut(s) 888
AciI CCGC 4 cut(s) 202, 365, 1171, 1841
AclWI GGATC 6 cut(s) 470, 483, 506, 1463, 1476, 1718
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 2 cut(s) 167, 1306
AcuI CTGAAG 2 cut(s) 756, 1805
AcvI CACGTG 2 cut(s) 1639, 1853
AcyI GRCGYC 1 cut(s) 422
AfaI GTAC 5 cut(s) 208, 936, 1316, 1670, 1893
AfeI AGCGCT 1 cut(s) 1344
AfiI CCNNNNNNNGG 6 cut(s) 232, 494, 882, 1387, 1799, 1904
AflIII ACRYGT 2 cut(s) 1248, 1566
AgsI TTSAA 7 cut(s) 106, 167, 172, 216, 400, 667, 1541
AjnI CCWGG 1 cut(s) 441
AjuI GAANNNNNNNTTGG 4 cut(s) 269, 301, 967, 999
Alw21I GWGCWC 2 cut(s) 1131, 1769
Alw26I GTCTC 4 cut(s) 9, 44, 413, 953
Alw44I GTGCAC 1 cut(s) 1765
AlwI GGATC 6 cut(s) 470, 483, 506, 1463, 1476, 1718
Aor51HI AGCGCT 1 cut(s) 1344
AoxI GGCC 7 cut(s) 304, 873, 1039, 1282, 1335, 1521, 1790
ApaLI GTGCAC 1 cut(s) 1765
ApeKI GCWGC 6 cut(s) 18, 929, 1004, 1089, 1260, 1297
ApoI RAATTY 2 cut(s) 167, 1306
Asp700I GAANNNNTTC 1 cut(s) 1142
AspLEI GCGC 2 cut(s) 888, 1345
AspS9I GGNCC 3 cut(s) 485, 1283, 1522
AsuC2I CCSGG 4 cut(s) 379, 737, 1495, 1526
AsuHPI GGTGA 4 cut(s) 395, 397, 1204, 1454
AsuNHI GCTAGC 1 cut(s) 596
AvaII GGWCC 1 cut(s) 485
AxyI CCTNAGG 1 cut(s) 480
BaeGI GKGCMC 1 cut(s) 1769
BalI TGGCCA 1 cut(s) 306
BamHI GGATCC 2 cut(s) 475, 1468
BauI CACGAG 1 cut(s) 553
BbrPI CACGTG 2 cut(s) 1639, 1853
Bbv12I GWGCWC 2 cut(s) 1131, 1769
BbvCI CCTCAGC 1 cut(s) 1339
BbvI GCAGC 6 cut(s) 5, 916, 1016, 1076, 1272, 1284
BccI CCATC 4 cut(s) 286, 317, 1200, 1619
BcgI CGANNNNNNTGC 2 cut(s) 683, 717
BciT130I CCWGG 1 cut(s) 443
BciVI GTATCC 1 cut(s) 1508
BclI TGATCA 1 cut(s) 1867
BcnI CCSGG 4 cut(s) 379, 737, 1495, 1526
BcoDI GTCTC 4 cut(s) 9, 44, 413, 953
BfaI CTAG 6 cut(s) 389, 597, 965, 1037, 1085, 1485
BfmI CTRYAG 3 cut(s) 19, 840, 930
BfoI RGCGCY 1 cut(s) 1346
BfuI GTATCC 1 cut(s) 1508
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 8 cut(s) 19, 930, 1005, 1090, 1171, 1261, 1298, 1841
BlpI GCTNAGC 1 cut(s) 1458
BlsI GCNGC 8 cut(s) 20, 931, 1006, 1091, 1172, 1262, 1299, 1842
Bme1390I CCNGG 5 cut(s) 379, 443, 737, 1495, 1526
Bme18I GGWCC 1 cut(s) 485
BmgT120I GGNCC 3 cut(s) 485, 1283, 1522
BmiI GGNNCC 5 cut(s) 477, 486, 1285, 1470, 1524
BmrFI CCNGG 5 cut(s) 379, 443, 737, 1495, 1526
BmsI GCATC 7 cut(s) 130, 583, 961, 1258, 1354, 1386, 1870
BmtI GCTAGC 1 cut(s) 600
Bpu10I CCTNAGC 1 cut(s) 1339
Bpu1102I GCTNAGC 1 cut(s) 1458
BpuEI CTTGAG 2 cut(s) 977, 1498
BpuMI CCSGG 4 cut(s) 379, 737, 1495, 1526
BsaAI YACGTR 2 cut(s) 1639, 1853
BsaBI GATNNNNATC 3 cut(s) 1272, 1860, 1872
BsaHI GRCGYC 1 cut(s) 422
BsaJI CCNNGG 5 cut(s) 133, 378, 1042, 1494, 1524
BsaXI ACNNNNNCTCC 2 cut(s) 1572, 1602
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 494, 882, 1387, 1799, 1904
Bse1I ACTGG 1 cut(s) 730
Bse21I CCTNAGG 1 cut(s) 480
Bse3DI GCAATG 2 cut(s) 1307, 1835
Bse8I GATNNNNATC 3 cut(s) 1272, 1860, 1872
BseBI CCWGG 1 cut(s) 443
BseDI CCNNGG 5 cut(s) 133, 378, 1042, 1494, 1524
BseGI GGATG 3 cut(s) 76, 1211, 1377
BseJI GATNNNNATC 3 cut(s) 1272, 1860, 1872
BseLI CCNNNNNNNGG 6 cut(s) 232, 494, 882, 1387, 1799, 1904
BseMI GCAATG 2 cut(s) 1307, 1835
BseMII CTCAG 5 cut(s) 387, 471, 729, 1116, 1353
BseNI ACTGG 1 cut(s) 730
BseRI GAGGAG 1 cut(s) 1083
BseSI GKGCMC 1 cut(s) 1769
BseXI GCAGC 6 cut(s) 5, 916, 1016, 1076, 1272, 1284
BseYI CCCAGC 1 cut(s) 1775
BsgI GTGCAG 1 cut(s) 561
Bsh1236I CGCG 1 cut(s) 888
Bsh1285I CGRYCG 1 cut(s) 525
BshFI GGCC 7 cut(s) 306, 875, 1041, 1284, 1337, 1523, 1792
BsiEI CGRYCG 1 cut(s) 525
BsiHKAI GWGCWC 2 cut(s) 1131, 1769
BsiSI CCGG 4 cut(s) 378, 737, 1494, 1526
BslFI GGGAC 4 cut(s) 248, 409, 498, 1519
BslI CCNNNNNNNGG 6 cut(s) 232, 494, 882, 1387, 1799, 1904
BsmAI GTCTC 4 cut(s) 9, 44, 413, 953
BsmBI CGTCTC 1 cut(s) 413
BsmFI GGGAC 4 cut(s) 248, 409, 498, 1519
BsnI GGCC 7 cut(s) 306, 875, 1041, 1284, 1337, 1523, 1792
Bsp1286I GDGCHC 2 cut(s) 1131, 1769
Bsp1720I GCTNAGC 1 cut(s) 1458
BspACI CCGC 4 cut(s) 202, 365, 1171, 1841
BspANI GGCC 7 cut(s) 306, 875, 1041, 1284, 1337, 1523, 1792
BspCNI CTCAG 5 cut(s) 386, 472, 728, 1117, 1352
BspFNI CGCG 1 cut(s) 888
BspHI TCATGA 4 cut(s) 288, 1213, 1809, 1864
BspLI GGNNCC 5 cut(s) 477, 486, 1285, 1470, 1524
BspMAI CTGCAG 3 cut(s) 23, 844, 934
BspOI GCTAGC 1 cut(s) 600
BspPI GGATC 6 cut(s) 470, 483, 506, 1463, 1476, 1718
BsrDI GCAATG 2 cut(s) 1307, 1835
BsrI ACTGG 1 cut(s) 730
BssECI CCNNGG 5 cut(s) 133, 378, 1042, 1494, 1524
BssNAI GTATAC 1 cut(s) 95
BssNI GRCGYC 1 cut(s) 422
BssSI CACGAG 1 cut(s) 553
BssT1I CCWWGG 1 cut(s) 133
Bst1107I GTATAC 1 cut(s) 95
Bst2BI CACGAG 1 cut(s) 553
Bst2UI CCWGG 1 cut(s) 443
Bst4CI ACNGT 3 cut(s) 261, 396, 616
Bst6I CTCTTC 2 cut(s) 47, 1100
BstACI GRCGYC 1 cut(s) 422
BstBAI YACGTR 2 cut(s) 1639, 1853
BstC8I GCNNGC 7 cut(s) 23, 27, 598, 813, 1552, 1745, 1769
BstDEI CTNAG 7 cut(s) 373, 480, 715, 1125, 1339, 1434, 1458
BstDSI CCRYGG 1 cut(s) 1042
BstENI CCTNNNNNAGG 1 cut(s) 1797
BstF5I GGATG 3 cut(s) 76, 1211, 1377
BstFNI CGCG 1 cut(s) 888
BstH2I RGCGCY 1 cut(s) 1346
BstHHI GCGC 2 cut(s) 888, 1345
BstMAI GTCTC 4 cut(s) 9, 44, 413, 953
BstMCI CGRYCG 1 cut(s) 525
BstNI CCWGG 1 cut(s) 443
BstNSI RCATGY 3 cut(s) 610, 1252, 1570
BstSCI CCNGG 5 cut(s) 377, 441, 735, 1493, 1524
BstSFI CTRYAG 3 cut(s) 19, 840, 930
BstSLI GKGCMC 1 cut(s) 1769
BstUI CGCG 1 cut(s) 888
BstV1I GCAGC 6 cut(s) 5, 916, 1016, 1076, 1272, 1284
BstX2I RGATCY 3 cut(s) 475, 1081, 1468
BstYI RGATCY 3 cut(s) 475, 1081, 1468
BstZ17I GTATAC 1 cut(s) 95
Bsu36I CCTNAGG 1 cut(s) 480
BsuI GTATCC 1 cut(s) 1508
BsuRI GGCC 7 cut(s) 306, 875, 1041, 1284, 1337, 1523, 1792
BtgI CCRYGG 1 cut(s) 1042
BtgZI GCGATG 1 cut(s) 153
BtsCI GGATG 3 cut(s) 76, 1211, 1377
BtsI GCAGTG 1 cut(s) 1379
BtsIMutI CAGTG 3 cut(s) 257, 318, 1379
Cac8I GCNNGC 7 cut(s) 23, 27, 598, 813, 1552, 1745, 1769
CciI TCATGA 4 cut(s) 288, 1213, 1809, 1864
CfoI GCGC 2 cut(s) 888, 1345
Cfr13I GGNCC 3 cut(s) 485, 1283, 1522
Csp6I GTAC 5 cut(s) 207, 935, 1315, 1669, 1892
CspCI CAANNNNNGTGG 2 cut(s) 1479, 1514
CviQI GTAC 5 cut(s) 207, 935, 1315, 1669, 1892
DdeI CTNAG 7 cut(s) 373, 480, 715, 1125, 1339, 1434, 1458
EaeI YGGCCR 1 cut(s) 304
Eam1104I CTCTTC 2 cut(s) 47, 1100
EarI CTCTTC 2 cut(s) 47, 1100
Eco130I CCWWGG 1 cut(s) 133
Eco147I AGGCCT 1 cut(s) 1792
Eco47I GGWCC 1 cut(s) 485
Eco47III AGCGCT 1 cut(s) 1344
Eco57I CTGAAG 2 cut(s) 756, 1805
Eco72I CACGTG 2 cut(s) 1639, 1853
Eco81I CCTNAGG 1 cut(s) 480
EcoNI CCTNNNNNAGG 1 cut(s) 1797
EcoO109I RGGNCCY 1 cut(s) 485
EcoRI GAATTC 1 cut(s) 167
EcoRII CCWGG 1 cut(s) 441
EcoT14I CCWWGG 1 cut(s) 133
ErhI CCWWGG 1 cut(s) 133
Esp3I CGTCTC 1 cut(s) 413
FalI AAGNNNNNCTT 4 cut(s) 1097, 1129, 1600, 1632
FaqI GGGAC 4 cut(s) 248, 409, 498, 1519
FauI CCCGC 1 cut(s) 372
FbaI TGATCA 1 cut(s) 1867
FblI GTMKAC 1 cut(s) 94
Fnu4HI GCNGC 8 cut(s) 19, 930, 1005, 1090, 1171, 1261, 1298, 1841
FokI GGATG 3 cut(s) 63, 1218, 1364
Fsp4HI GCNGC 8 cut(s) 19, 930, 1005, 1090, 1171, 1261, 1298, 1841
FspBI CTAG 6 cut(s) 389, 597, 965, 1037, 1085, 1485
GlaI GCGC 2 cut(s) 887, 1344
GluI GCNGC 8 cut(s) 19, 930, 1005, 1090, 1171, 1261, 1298, 1841
GsaI CCCAGC 1 cut(s) 1779
HaeII RGCGCY 1 cut(s) 1346
HaeIII GGCC 7 cut(s) 306, 875, 1041, 1284, 1337, 1523, 1792
HapII CCGG 4 cut(s) 378, 737, 1494, 1526
HhaI GCGC 2 cut(s) 888, 1345
Hin1I GRCGYC 1 cut(s) 422
Hin6I GCGC 2 cut(s) 886, 1343
HinP1I GCGC 2 cut(s) 886, 1343
HinfI GANTC 8 cut(s) 152, 236, 782, 1071, 1110, 1121, 1559, 1886
HpaII CCGG 4 cut(s) 378, 737, 1494, 1526
HphI GGTGA 4 cut(s) 395, 397, 1204, 1454
Hpy166II GTNNAC 5 cut(s) 95, 207, 768, 1232, 1767
Hpy188I TCNGA 4 cut(s) 775, 787, 1126, 1564
Hpy8I GTNNAC 5 cut(s) 95, 207, 768, 1232, 1767
HpyAV CCTTC 5 cut(s) 948, 1026, 1391, 1602, 1807
HpyCH4III ACNGT 3 cut(s) 261, 396, 616
HpyCH4IV ACGT 4 cut(s) 422, 549, 1638, 1852
HpyF3I CTNAG 7 cut(s) 373, 480, 715, 1125, 1339, 1434, 1458
HpySE526I ACGT 4 cut(s) 422, 549, 1638, 1852
Hsp92I GRCGYC 1 cut(s) 422
HspAI GCGC 2 cut(s) 886, 1343
Ksp22I TGATCA 1 cut(s) 1867
LmnI GCTCC 1 cut(s) 926
Lsp1109I GCAGC 6 cut(s) 5, 916, 1016, 1076, 1272, 1284
LweI GCATC 7 cut(s) 130, 583, 961, 1258, 1354, 1386, 1870
MaeI CTAG 6 cut(s) 389, 597, 965, 1037, 1085, 1485
MaeII ACGT 4 cut(s) 422, 549, 1638, 1852
MaeIII GTNAC 6 cut(s) 255, 550, 568, 583, 844, 889
MboII GAAGA 7 cut(s) 34, 680, 844, 1117, 1373, 1676, 1811
MflI RGATCY 3 cut(s) 475, 1081, 1468
MhlI GDGCHC 2 cut(s) 1131, 1769
MlsI TGGCCA 1 cut(s) 306
MluCI AATT 6 cut(s) 167, 652, 995, 1306, 1596, 1749
MluNI TGGCCA 1 cut(s) 306
MlyI GAGTC 5 cut(s) 161, 230, 1080, 1115, 1880
MmeI TCCRAC 1 cut(s) 104
Mox20I TGGCCA 1 cut(s) 306
MroXI GAANNNNTTC 1 cut(s) 1142
MscI TGGCCA 1 cut(s) 306
MseI TTAA 5 cut(s) 9, 546, 860, 1395, 1428
MslI CAYNNNNRTG 4 cut(s) 287, 605, 860, 1362
Msp20I TGGCCA 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 1825
MspI CCGG 4 cut(s) 378, 737, 1494, 1526
MspR9I CCNGG 5 cut(s) 379, 443, 737, 1495, 1526
MvaI CCWGG 1 cut(s) 443
MvnI CGCG 1 cut(s) 888
NciI CCSGG 4 cut(s) 379, 737, 1495, 1526
NheI GCTAGC 1 cut(s) 596
NlaIV GGNNCC 5 cut(s) 477, 486, 1285, 1470, 1524
NmuCI GTSAC 3 cut(s) 255, 550, 568
NspI RCATGY 3 cut(s) 610, 1252, 1570
PagI TCATGA 4 cut(s) 288, 1213, 1809, 1864
PceI AGGCCT 1 cut(s) 1792
PciI ACATGT 2 cut(s) 1248, 1566
PdmI GAANNNNTTC 1 cut(s) 1142
PfeI GAWTC 3 cut(s) 782, 1110, 1559
PkrI GCNGC 8 cut(s) 20, 931, 1006, 1091, 1172, 1262, 1299, 1842
PleI GAGTC 5 cut(s) 160, 230, 1079, 1115, 1880
PmaCI CACGTG 2 cut(s) 1639, 1853
PmlI CACGTG 2 cut(s) 1639, 1853
PpsI GAGTC 5 cut(s) 160, 230, 1079, 1115, 1880
Ppu21I YACGTR 2 cut(s) 1639, 1853
PpuMI RGGWCCY 1 cut(s) 485
PscI ACATGT 2 cut(s) 1248, 1566
Psp5II RGGWCCY 1 cut(s) 485
Psp6I CCWGG 1 cut(s) 441
PspCI CACGTG 2 cut(s) 1639, 1853
PspFI CCCAGC 1 cut(s) 1775
PspGI CCWGG 1 cut(s) 441
PspN4I GGNNCC 5 cut(s) 477, 486, 1285, 1470, 1524
PspPI GGNCC 3 cut(s) 485, 1283, 1522
PspPPI RGGWCCY 1 cut(s) 485
PsrI GAACNNNNNNTAC 2 cut(s) 113, 145
PstI CTGCAG 3 cut(s) 23, 844, 934
PsuI RGATCY 3 cut(s) 475, 1081, 1468
PvuII CAGCTG 1 cut(s) 1825
RsaI GTAC 5 cut(s) 208, 936, 1316, 1670, 1893
RsaNI GTAC 5 cut(s) 207, 935, 1315, 1669, 1892
RseI CAYNNNNRTG 4 cut(s) 287, 605, 860, 1362
SaqAI TTAA 5 cut(s) 9, 546, 860, 1395, 1428
SatI GCNGC 8 cut(s) 19, 930, 1005, 1090, 1171, 1261, 1298, 1841
Sau96I GGNCC 3 cut(s) 485, 1283, 1522
SchI GAGTC 5 cut(s) 161, 230, 1080, 1115, 1880
ScrFI CCNGG 5 cut(s) 379, 443, 737, 1495, 1526
SduI GDGCHC 2 cut(s) 1131, 1769
SfaNI GCATC 7 cut(s) 130, 583, 961, 1258, 1354, 1386, 1870
SfcI CTRYAG 3 cut(s) 19, 840, 930
SinI GGWCC 1 cut(s) 485
SmiMI CAYNNNNRTG 4 cut(s) 287, 605, 860, 1362
SmlI CTYRAG 2 cut(s) 956, 1477
SmoI CTYRAG 2 cut(s) 956, 1477
Sse9I AATT 6 cut(s) 167, 652, 995, 1306, 1596, 1749
SseBI AGGCCT 1 cut(s) 1792
SsiI CCGC 4 cut(s) 202, 365, 1171, 1841
SspI AATATT 1 cut(s) 819
SspMI CTAG 6 cut(s) 389, 597, 965, 1037, 1085, 1485
StuI AGGCCT 1 cut(s) 1792
StyD4I CCNGG 5 cut(s) 377, 441, 735, 1493, 1524
StyI CCWWGG 1 cut(s) 133
TaaI ACNGT 3 cut(s) 261, 396, 616
TaiI ACGT 4 cut(s) 425, 552, 1641, 1855
TaqI TCGA 4 cut(s) 417, 591, 672, 1689
TaqII GACCGA 2 cut(s) 243, 511
TasI AATT 6 cut(s) 167, 652, 995, 1306, 1596, 1749
TatI WGTACW 1 cut(s) 206
TauI GCSGC 2 cut(s) 1173, 1843
TfiI GAWTC 3 cut(s) 782, 1110, 1559
Tru1I TTAA 5 cut(s) 9, 546, 860, 1395, 1428
Tru9I TTAA 5 cut(s) 9, 546, 860, 1395, 1428
TscAI CASTG 3 cut(s) 264, 325, 1379
TseFI GTSAC 3 cut(s) 255, 550, 568
TseI GCWGC 6 cut(s) 18, 929, 1004, 1089, 1260, 1297
Tsp45I GTSAC 3 cut(s) 255, 550, 568
TspGWI ACGGA 1 cut(s) 1059
TspRI CASTG 3 cut(s) 264, 325, 1379
VneI GTGCAC 1 cut(s) 1765
VpaK11BI GGWCC 1 cut(s) 485
XagI CCTNNNNNAGG 1 cut(s) 1797
XapI RAATTY 2 cut(s) 167, 1306
XceI RCATGY 3 cut(s) 610, 1252, 1570
XcmI CCANNNNNNNNNTGG 1 cut(s) 1650
XmiI GTMKAC 1 cut(s) 94
XmnI GAANNNNTTC 1 cut(s) 1142
XspI CTAG 6 cut(s) 389, 597, 965, 1037, 1085, 1485
ZraI GACGTC 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.