Rroxscaffold_2G00135490

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
73047635 .. 73049620
1986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00135490.1

Sequence Viewer

Length: 1986 bp
ATGCATGCGATGATGTCTCTAATAAGGGTGGCAAATTTTCGTCTTCACTACTACTCGAATAATTGCAGTATTATGCACTTGATCATCTCCATCAATTTCCTCCTTATTCCCTTTTGCCATACGCTTTCCTTCAGTATCAATCACTTCGATAAAACTGCAAGTAAGATACGCTACGACGGTGATGCAGCGCCTTCTTCCGACGGTTCGGGATTCATTGATCTCAATATAATAGATATTTATCGAGTTGGCTGGGCTACCTATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTGCAGACTTCACTACTAACTTCTCCTTCGTTGTGGACACTCTTAACAGGAGCATAATTGGTGATGGGATTTCCTTCTTCCTCGCTCCGGTCAACTATCAAATTCCACCCAACTCCGACGGTCCCTTTATGGGCTTGTTCAACCAGACCACTGCTTCTGCAGCCTCCCAAAACCAGCTTGTTACGGTCGAGTTCGACACTGTGGCCGGCATCGTCGAGGATCAATCGTGGGGGCCGCACATCGGGATTACCAACAGGACCGTCACGCCAGTTGTTCATGCCAGCTGGGATCCTTTCCTCCACAGTGGGAAAGAGTGTCGTGCACGGATAACATACAATGCTACCACCAACAACCTCACCGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCCTTACTATTGACCTGAGGAAGTCTCTCCCAGAGTGGGTTACAATTGGATTTTCAGCTTCTACAGGCCTTGCCTATGAGCGGAATGTTATAAGTTCATGGGAATTCAGTAGTTCAGAATTAAAGTCCGATGCAAGCCGAAGGAGGATAGTCTTGAAGATTGGGGTCACCACAGCAGCAGTTGTTTTCTTGATTTTGATGCTTTATGTGGCCTACTGGTGGGTCGTACGGAAGCGGATAAAGAGGAATGGTGGAGATGAAAATGGGATGAATGATTCCTCCAGTGCTGAATTGTCCTCCATAAATCCAAGACAATTTACTTATCAAGAACTGGTTACAGCCACCAATGGCTTCACAAACGATAGAAGGCTAGGCCAGGGAGGATCAGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGCACTATGAGAAGATCTTCATCAACGAAGTCAAAATCATAAGCAGCATTATACATAAAAACTTGGTGCGCTTCATTGGATGGTGTCATGCGCAAGGCGAATGCATGATTGTTTATGAATACATGCCTAACAGTAGCCTTGACACACATTTATTTGGCTCTAGAGCAACCTTGCAATGGGAGTTTAGGTATAGAATAGCTTTAGGCTTGGCCTCAGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAATGTTCTGCTGGACAACTATTTCAACACTAAACTTGGTGATTTTGGGATTGCTAAGCTCGTGGATCCGCTGCTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGATACATGGCTCCAGAATATGTTATTGAAGGGAAGGCAAGCAAAGAATCAGACATGTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGAGGACTTACTATGATGGAGAATTTCACTTACCACTTTATAGATGGGTTTGGAATTTGTACCTTGCAGAAAATTTACTAGATGCAGCTGATGAGAGATTGGGTGTACATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCACCCCAACAGCAAAGAAAGGCCAAAAGCAGGACAAGTGATTAAGGTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCAAATATCATGCTTGATTACCCAATGCCTCAACCTCAACAACAAGCCCAATTCGGTTCCTCTCAGCCTCTGTTGTCACTAACTTCTAGCATCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

661

Amino Acids

74.26

Weight (kDa)

5.89

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 42 - 280 6.1e-58 Legume lectin domain
Pkinase PF00069 353 - 557 4.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 354 - 554 9.7e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 794, 1101
Acc16I TGCGCA 1 cut(s) 1257
AccBSI CCGCTC 1 cut(s) 784
AciI CCGC 4 cut(s) 533, 784, 937, 1511
AclWI GGATC 7 cut(s) 525, 581, 594, 1093, 1115, 1502, 1515
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 8 cut(s) 34, 399, 679, 691, 806, 1670, 1702, 1720
AcuI CTGAAG 1 cut(s) 115
AfaI GTAC 3 cut(s) 930, 1709, 1755
AfeI AGCGCT 1 cut(s) 1383
AflIII ACRYGT 1 cut(s) 1605
AgsI TTSAA 5 cut(s) 439, 859, 1468, 1580, 1868
AjnI CCWGG 1 cut(s) 1077
AluBI AGCT 9 cut(s) 475, 582, 761, 1364, 1442, 1501, 1614, 1736, 1864
AluI AGCT 9 cut(s) 475, 582, 761, 1364, 1442, 1501, 1614, 1736, 1864
Alw21I GWGCWC 2 cut(s) 622, 1808
Alw26I GTCTC 3 cut(s) 21, 732, 1527
Alw44I GTGCAC 2 cut(s) 618, 1804
AlwI GGATC 7 cut(s) 525, 581, 594, 1093, 1115, 1502, 1515
AlwNI CAGNNNCTG 2 cut(s) 1136, 1957
Aor51HI AGCGCT 1 cut(s) 1383
AoxI GGCC 8 cut(s) 501, 530, 769, 912, 1075, 1374, 1626, 1829
ApaLI GTGCAC 2 cut(s) 618, 1804
ApeKI GCWGC 7 cut(s) 185, 299, 458, 878, 1209, 1513, 1733
ApoI RAATTY 8 cut(s) 34, 399, 679, 691, 806, 1670, 1702, 1720
Asp700I GAANNNNTTC 1 cut(s) 1181
AspLEI GCGC 4 cut(s) 190, 1236, 1258, 1384
AspS9I GGNCC 3 cut(s) 419, 530, 555
AsuHPI GGTGA 6 cut(s) 191, 371, 646, 862, 1493, 1802
AvaII GGWCC 2 cut(s) 419, 555
AxyI CCTNAGG 1 cut(s) 719
BaeGI GKGCMC 2 cut(s) 622, 1808
BamHI GGATCC 2 cut(s) 586, 1507
BauI CACGAG 2 cut(s) 1397, 1502
BbsI GAAGAC 1 cut(s) 35
Bbv12I GWGCWC 2 cut(s) 622, 1808
BbvCI CCTCAGC 1 cut(s) 1378
BbvI GCAGC 7 cut(s) 197, 286, 470, 890, 1221, 1500, 1745
BccI CCATC 5 cut(s) 98, 356, 1239, 1658, 1686
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 4 cut(s) 137, 164, 171, 198
BciT130I CCWGG 1 cut(s) 1079
BciVI GTATCC 1 cut(s) 1547
BclI TGATCA 2 cut(s) 81, 1762
BcoDI GTCTC 3 cut(s) 21, 732, 1527
BfaI CTAG 5 cut(s) 1073, 1121, 1326, 1727, 1974
BfmI CTRYAG 4 cut(s) 300, 456, 765, 1530
BfoI RGCGCY 2 cut(s) 191, 1385
BfuI GTATCC 1 cut(s) 1547
BglII AGATCT 2 cut(s) 1117, 1179
BisI GCNGC 8 cut(s) 186, 300, 459, 533, 879, 1210, 1514, 1734
BlpI GCTNAGC 1 cut(s) 1497
BlsI GCNGC 8 cut(s) 187, 301, 460, 534, 880, 1211, 1515, 1735
Bme1390I CCNGG 1 cut(s) 1079
Bme18I GGWCC 2 cut(s) 419, 555
BmgT120I GGNCC 3 cut(s) 419, 530, 555
BmiI GGNNCC 6 cut(s) 421, 531, 588, 1509, 1563, 1945
BmrFI CCNGG 1 cut(s) 1079
BmsI GCATC 6 cut(s) 172, 516, 823, 891, 1393, 1720
BpiI GAAGAC 1 cut(s) 35
BplI GAGNNNNNCTC 2 cut(s) 712, 744
BpmI CTGGAG 3 cut(s) 967, 1548, 1844
Bpu10I CCTNAGC 2 cut(s) 1378, 1517
Bpu1102I GCTNAGC 1 cut(s) 1497
BsaBI GATNNNNATC 2 cut(s) 237, 1184
BsaI GGTCTC 1 cut(s) 1527
BsaJI CCNNGG 2 cut(s) 1078, 1629
BsaWI WCCGGW 1 cut(s) 385
BsaXI ACNNNNNCTCC 6 cut(s) 275, 305, 1337, 1367, 1769, 1799
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 4 cut(s) 566, 923, 984, 1038
Bse21I CCTNAGG 1 cut(s) 719
Bse3DI GCAATG 2 cut(s) 1346, 1874
Bse8I GATNNNNATC 2 cut(s) 237, 1184
BseBI CCWGG 1 cut(s) 1079
BseDI CCNNGG 2 cut(s) 1078, 1629
BseGI GGATG 3 cut(s) 975, 1250, 1408
BseJI GATNNNNATC 2 cut(s) 237, 1184
BseMI GCAATG 2 cut(s) 1346, 1874
BseMII CTCAG 4 cut(s) 710, 1392, 1538, 1964
BseNI ACTGG 4 cut(s) 566, 923, 984, 1038
BseSI GKGCMC 2 cut(s) 622, 1808
BseXI GCAGC 7 cut(s) 197, 286, 470, 890, 1221, 1500, 1745
BseYI CCCAGC 2 cut(s) 249, 582
BsgI GTGCAG 1 cut(s) 1149
Bsh1285I CGRYCG 1 cut(s) 486
BshFI GGCC 8 cut(s) 503, 532, 771, 914, 1077, 1376, 1628, 1831
BsiEI CGRYCG 1 cut(s) 486
BsiHKAI GWGCWC 2 cut(s) 622, 1808
BsiSI CCGG 2 cut(s) 386, 504
BsiWI CGTACG 1 cut(s) 928
BslFI GGGAC 2 cut(s) 405, 1558
BsmAI GTCTC 3 cut(s) 21, 732, 1527
BsmFI GGGAC 2 cut(s) 405, 1558
BsmI GAATGC 1 cut(s) 1271
BsnI GGCC 8 cut(s) 503, 532, 771, 914, 1077, 1376, 1628, 1831
Bso31I GGTCTC 1 cut(s) 1527
Bsp1286I GDGCHC 2 cut(s) 622, 1808
Bsp1407I TGTACA 1 cut(s) 1753
Bsp1720I GCTNAGC 1 cut(s) 1497
BspACI CCGC 4 cut(s) 533, 784, 937, 1511
BspANI GGCC 8 cut(s) 503, 532, 771, 914, 1077, 1376, 1628, 1831
BspCNI CTCAG 4 cut(s) 711, 1391, 1537, 1963
BspLI GGNNCC 6 cut(s) 421, 531, 588, 1509, 1563, 1945
BspMAI CTGCAG 2 cut(s) 304, 460
BspPI GGATC 7 cut(s) 525, 581, 594, 1093, 1115, 1502, 1515
BspTNI GGTCTC 1 cut(s) 1527
BsrBI CCGCTC 1 cut(s) 784
BsrDI GCAATG 2 cut(s) 1346, 1874
BsrFI RCCGGY 1 cut(s) 503
BsrGI TGTACA 1 cut(s) 1753
BsrI ACTGG 4 cut(s) 566, 923, 984, 1038
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 2 cut(s) 1078, 1629
BssSI CACGAG 2 cut(s) 1397, 1502
BssT1I CCWWGG 1 cut(s) 1629
Bst2BI CACGAG 2 cut(s) 1397, 1502
Bst2UI CCWGG 1 cut(s) 1079
Bst4CI ACNGT 9 cut(s) 179, 203, 419, 484, 499, 559, 602, 658, 1298
Bst6I CTCTTC 1 cut(s) 1136
BstAUI TGTACA 1 cut(s) 1753
BstC8I GCNNGC 5 cut(s) 6, 505, 580, 838, 1591
BstDEI CTNAG 6 cut(s) 719, 1378, 1497, 1517, 1524, 1950
BstEII GGTNACC 1 cut(s) 868
BstF5I GGATG 3 cut(s) 975, 1250, 1408
BstH2I RGCGCY 2 cut(s) 191, 1385
BstHHI GCGC 4 cut(s) 190, 1236, 1258, 1384
BstMAI GTCTC 3 cut(s) 21, 732, 1527
BstMCI CGRYCG 1 cut(s) 486
BstMWI GCNNNNNNNGC 2 cut(s) 260, 458
BstNI CCWGG 1 cut(s) 1079
BstNSI RCATGY 3 cut(s) 8, 1291, 1609
BstPI GGTNACC 1 cut(s) 868
BstSCI CCNGG 1 cut(s) 1077
BstSFI CTRYAG 4 cut(s) 300, 456, 765, 1530
BstSLI GKGCMC 2 cut(s) 622, 1808
BstV1I GCAGC 7 cut(s) 197, 286, 470, 890, 1221, 1500, 1745
BstV2I GAAGAC 1 cut(s) 35
BstX2I RGATCY 4 cut(s) 586, 1117, 1179, 1507
BstYI RGATCY 4 cut(s) 586, 1117, 1179, 1507
Bsu36I CCTNAGG 1 cut(s) 719
BsuI GTATCC 1 cut(s) 1547
BsuRI GGCC 8 cut(s) 503, 532, 771, 914, 1077, 1376, 1628, 1831
BtgZI GCGATG 1 cut(s) 23
BtsCI GGATG 3 cut(s) 975, 1250, 1408
BtsI GCAGTG 2 cut(s) 447, 1418
BtsIMutI CAGTG 5 cut(s) 447, 495, 607, 991, 1418
Cac8I GCNNGC 5 cut(s) 6, 505, 580, 838, 1591
CaiI CAGNNNCTG 2 cut(s) 1136, 1957
CfoI GCGC 4 cut(s) 190, 1236, 1258, 1384
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 3 cut(s) 419, 530, 555
Csp6I GTAC 3 cut(s) 929, 1708, 1754
CviAII CATG 9 cut(s) 5, 575, 801, 1253, 1270, 1288, 1558, 1606, 1897
CviQI GTAC 3 cut(s) 929, 1708, 1754
DdeI CTNAG 6 cut(s) 719, 1378, 1497, 1517, 1524, 1950
EaeI YGGCCR 1 cut(s) 501
Eam1104I CTCTTC 1 cut(s) 1136
EarI CTCTTC 1 cut(s) 1136
Eco130I CCWWGG 1 cut(s) 1629
Eco147I AGGCCT 1 cut(s) 771
Eco31I GGTCTC 1 cut(s) 1527
Eco32I GATATC 1 cut(s) 1432
Eco47I GGWCC 2 cut(s) 419, 555
Eco47III AGCGCT 1 cut(s) 1383
Eco57I CTGAAG 1 cut(s) 115
Eco81I CCTNAGG 1 cut(s) 719
Eco91I GGTNACC 1 cut(s) 868
EcoO65I GGTNACC 1 cut(s) 868
EcoRI GAATTC 1 cut(s) 806
EcoRII CCWGG 1 cut(s) 1077
EcoRV GATATC 1 cut(s) 1432
EcoT14I CCWWGG 1 cut(s) 1629
EcoT22I ATGCAT 2 cut(s) 6, 1271
ErhI CCWWGG 1 cut(s) 1629
FaeI CATG 9 cut(s) 8, 578, 804, 1256, 1273, 1291, 1561, 1609, 1900
FalI AAGNNNNNCTT 4 cut(s) 1133, 1165, 1639, 1671
FaqI GGGAC 2 cut(s) 405, 1558
FatI CATG 9 cut(s) 4, 574, 800, 1252, 1269, 1287, 1557, 1605, 1896
FbaI TGATCA 2 cut(s) 81, 1762
Fnu4HI GCNGC 8 cut(s) 186, 300, 459, 533, 879, 1210, 1514, 1734
FokI GGATG 3 cut(s) 982, 1257, 1415
Fsp4HI GCNGC 8 cut(s) 186, 300, 459, 533, 879, 1210, 1514, 1734
FspBI CTAG 5 cut(s) 1073, 1121, 1326, 1727, 1974
FspI TGCGCA 1 cut(s) 1257
GlaI GCGC 4 cut(s) 189, 1235, 1257, 1383
GluI GCNGC 8 cut(s) 186, 300, 459, 533, 879, 1210, 1514, 1734
GsaI CCCAGC 2 cut(s) 253, 586
GsuI CTGGAG 3 cut(s) 967, 1548, 1844
HaeII RGCGCY 2 cut(s) 191, 1385
HaeIII GGCC 8 cut(s) 503, 532, 771, 914, 1077, 1376, 1628, 1831
HapII CCGG 2 cut(s) 386, 504
HhaI GCGC 4 cut(s) 190, 1236, 1258, 1384
Hin1II CATG 9 cut(s) 8, 578, 804, 1256, 1273, 1291, 1561, 1609, 1900
Hin6I GCGC 4 cut(s) 188, 1234, 1256, 1382
HinP1I GCGC 4 cut(s) 188, 1234, 1256, 1382
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HinfI GANTC 4 cut(s) 210, 977, 1146, 1598
HpaII CCGG 2 cut(s) 386, 504
HphI GGTGA 6 cut(s) 191, 371, 646, 862, 1493, 1802
Hpy166II GTNNAC 5 cut(s) 334, 391, 620, 1754, 1806
Hpy188I TCNGA 8 cut(s) 199, 415, 820, 832, 1162, 1527, 1603, 1619
Hpy188III TCNNGA 9 cut(s) 207, 541, 856, 892, 1028, 1089, 1326, 1543, 1565
Hpy8I GTNNAC 5 cut(s) 334, 391, 620, 1754, 1806
Hpy99I CGWCG 4 cut(s) 179, 203, 419, 515
HpyCH4III ACNGT 9 cut(s) 179, 203, 419, 484, 499, 559, 602, 658, 1298
HpyF10VI GCNNNNNNNGC 2 cut(s) 260, 458
HpyF3I CTNAG 6 cut(s) 719, 1378, 1497, 1517, 1524, 1950
Hsp92II CATG 9 cut(s) 8, 578, 804, 1256, 1273, 1291, 1561, 1609, 1900
HspAI GCGC 4 cut(s) 188, 1234, 1256, 1382
KroI GCCGGC 1 cut(s) 503
KroNI GCCGGC 1 cut(s) 505
Ksp22I TGATCA 2 cut(s) 81, 1762
LmnI GCTCC 3 cut(s) 348, 388, 1567
Lsp1109I GCAGC 7 cut(s) 197, 286, 470, 890, 1221, 1500, 1745
LweI GCATC 6 cut(s) 172, 516, 823, 891, 1393, 1720
MaeI CTAG 5 cut(s) 1073, 1121, 1326, 1727, 1974
MaeIII GTNAC 7 cut(s) 291, 478, 559, 742, 868, 1036, 1962
MbiI CCGCTC 1 cut(s) 784
MfeI CAATTG 1 cut(s) 747
MflI RGATCY 4 cut(s) 586, 1117, 1179, 1507
MhlI GDGCHC 2 cut(s) 622, 1808
MmeI TCCRAC 4 cut(s) 222, 438, 1185, 1774
Mph1103I ATGCAT 2 cut(s) 6, 1271
MroNI GCCGGC 1 cut(s) 503
MroXI GAANNNNTTC 1 cut(s) 1181
MseI TTAA 4 cut(s) 342, 824, 1787, 1851
MslI CAYNNNNRTG 1 cut(s) 1401
MspA1I CMGCKG 3 cut(s) 582, 1513, 1736
MspI CCGG 2 cut(s) 386, 504
MspR9I CCNGG 1 cut(s) 1079
MunI CAATTG 1 cut(s) 747
Mva1269I GAATGC 1 cut(s) 1271
MvaI CCWGG 1 cut(s) 1079
MwoI GCNNNNNNNGC 2 cut(s) 260, 458
NaeI GCCGGC 1 cut(s) 505
NgoMIV GCCGGC 1 cut(s) 503
NlaIII CATG 9 cut(s) 8, 578, 804, 1256, 1273, 1291, 1561, 1609, 1900
NlaIV GGNNCC 6 cut(s) 421, 531, 588, 1509, 1563, 1945
NmuCI GTSAC 4 cut(s) 291, 559, 868, 1962
NsbI TGCGCA 1 cut(s) 1257
NsiI ATGCAT 2 cut(s) 6, 1271
NspI RCATGY 3 cut(s) 8, 1291, 1609
PaeI GCATGC 1 cut(s) 8
PceI AGGCCT 1 cut(s) 771
PciI ACATGT 1 cut(s) 1605
PctI GAATGC 1 cut(s) 1271
PdiI GCCGGC 1 cut(s) 505
PdmI GAANNNNTTC 1 cut(s) 1181
PfeI GAWTC 4 cut(s) 210, 977, 1146, 1598
Pfl23II CGTACG 1 cut(s) 928
PkrI GCNGC 8 cut(s) 187, 301, 460, 534, 880, 1211, 1515, 1735
PscI ACATGT 1 cut(s) 1605
PsiI TTATAA 2 cut(s) 794, 1101
Psp6I CCWGG 1 cut(s) 1077
PspEI GGTNACC 1 cut(s) 868
PspFI CCCAGC 2 cut(s) 249, 582
PspGI CCWGG 1 cut(s) 1077
PspLI CGTACG 1 cut(s) 928
PspN4I GGNNCC 6 cut(s) 421, 531, 588, 1509, 1563, 1945
PspPI GGNCC 3 cut(s) 419, 530, 555
PstI CTGCAG 2 cut(s) 304, 460
PstNI CAGNNNCTG 2 cut(s) 1136, 1957
PsuI RGATCY 4 cut(s) 586, 1117, 1179, 1507
PvuII CAGCTG 2 cut(s) 582, 1736
RsaI GTAC 3 cut(s) 930, 1709, 1755
RsaNI GTAC 3 cut(s) 929, 1708, 1754
RseI CAYNNNNRTG 1 cut(s) 1401
SaqAI TTAA 4 cut(s) 342, 824, 1787, 1851
SatI GCNGC 8 cut(s) 186, 300, 459, 533, 879, 1210, 1514, 1734
Sau96I GGNCC 3 cut(s) 419, 530, 555
ScrFI CCNGG 1 cut(s) 1079
SduI GDGCHC 2 cut(s) 622, 1808
SfaNI GCATC 6 cut(s) 172, 516, 823, 891, 1393, 1720
SfcI CTRYAG 4 cut(s) 300, 456, 765, 1530
SinI GGWCC 2 cut(s) 419, 555
SmiMI CAYNNNNRTG 1 cut(s) 1401
SphI GCATGC 1 cut(s) 8
SseBI AGGCCT 1 cut(s) 771
SsiI CCGC 4 cut(s) 533, 784, 937, 1511
SspMI CTAG 5 cut(s) 1073, 1121, 1326, 1727, 1974
StuI AGGCCT 1 cut(s) 771
StyD4I CCNGG 1 cut(s) 1077
StyI CCWWGG 1 cut(s) 1629
TaaI ACNGT 9 cut(s) 179, 203, 419, 484, 499, 559, 602, 658, 1298
TaqI TCGA 7 cut(s) 56, 147, 241, 486, 492, 513, 684
TatI WGTACW 1 cut(s) 1753
TauI GCSGC 1 cut(s) 535
TfiI GAWTC 4 cut(s) 210, 977, 1146, 1598
Tru1I TTAA 4 cut(s) 342, 824, 1787, 1851
Tru9I TTAA 4 cut(s) 342, 824, 1787, 1851
TscAI CASTG 5 cut(s) 454, 502, 607, 991, 1418
TseFI GTSAC 4 cut(s) 291, 559, 868, 1962
TseI GCWGC 7 cut(s) 185, 299, 458, 878, 1209, 1513, 1733
Tsp45I GTSAC 4 cut(s) 291, 559, 868, 1962
TspGWI ACGGA 2 cut(s) 637, 946
TspRI CASTG 5 cut(s) 454, 502, 607, 991, 1418
VneI GTGCAC 2 cut(s) 618, 1804
VpaK11BI GGWCC 2 cut(s) 419, 555
XapI RAATTY 8 cut(s) 34, 399, 679, 691, 806, 1670, 1702, 1720
XbaI TCTAGA 1 cut(s) 1325
XceI RCATGY 3 cut(s) 8, 1291, 1609
XcmI CCANNNNNNNNNTGG 1 cut(s) 1689
XmnI GAANNNNTTC 1 cut(s) 1181
XspI CTAG 5 cut(s) 1073, 1121, 1326, 1727, 1974
Zsp2I ATGCAT 2 cut(s) 6, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.