Rw5G025610

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
36693107 .. 36695194
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025610.1

Sequence Viewer

Length: 2088 bp
ATGGTTGTCATCAACAATTGTGGGAATCGGATCATGACACACCTGCATGAGTACTCACTAAAACAGCTTCAATTCCTTCTTCTTCTCTTCTTTCTGCTAACCCCTTCTGCAACCTCATTAACCTTCAATCTCCCGAACTTTTCCGGTGTGGGCGACTCTATAATAAAAACCGAGGAACATGCTACTATCGACAAGAAAGTCCTCCGACTCACCAATAGTGGTGTAGATGAACAACGGGCGGAAAGCTTCGGTCGAGCCTACTACCAAAAACCCTTCCTCCTCCGCGAAATTGCCACCGGAAAGCTTGCTGATTTTACCACACATTTCACCTTTGTCATCGATTCTCAACGGAACCCCGACTATGCAGACGGGCTAGTGTTCTTCATAGCGCCAAACGGATCCTTTTTCAACACATCCCTCGGAGGAGGAGGAGGTGCCCTCGGCCTCCCCGTGGCACCCACGTCAGGAGATATTGGGTACAACTTTGTGGCGGTGGAGTTTGATATCTTCCAGAATACTCAAACATTCATCAACGATTCCACCGGCGACCATGTGGGTATCGACGCCAACTCTATCAAGTCCTTGGACACCAAGGCTTGGAATGGTAGTATTAGATCTGGAGTAAACAATAGTGCTACGGTTAGTTACAATTCTAGCACAAAAAATCTTAGCGTTGCCTTCACTACTTTCGTTGATGGTACCCAACAGATGGACTATCTTTCTCACCAAGTTGATCTGATAAAGTACTTGCCCGACTTGGTCATTGTGGGTTTCTCTGCTGCGACGGGGGCTAAGTTTGCTGTGCACAAGATCCTCTCGTGGGATTTTACTTCTACTAACCTGACTATCCCAGGAGATGGGGTGAACCCAGGAAATGGGGTGAGTGTAGCACTAGTCGTTGGGTTGAGTATTGGTGGATTCATTATCTTGGTTGGTGGGTTGACATTGGTTTGGTTTATCTTTTGGAAGAAGAGGGAAGGAGGGGAAAGTGATGATGAAGATCCCATGGTACTTAATGACGAATTTGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAGCGAGTTGGCTCGAGCAACAAATAATTTTGCAGAGGGAGAGAAGCTTGGAGAGGGAGGTTTTGGTGGGGTTTATAGGGGCTTCATAAAAGACATGAACTCATATGTTGCTGTTAAGAGGGTATCCAAGGGGTCTAAGCAAGGAGTAAAGGAGTATGCATCGGAAGTAAGGATCATCAGTCGGCTTAGGCATCGAAATCTCGTGCAACTAATTGGTTGGTGCCATGAAAAAAGTGAGCTCCTACTTGTCTATGAGTACATGCCCAACGGTAGTTTAGATTCCCATCTATTCAAATTAAAAAGCTTGTTAAGTTGGAGAGTAAGATACAAGATTGCTCAAGGGTTGGCTTCGGGCTTATTTTACCTACACGAAGAATGGGAACAATGTGTTCTGCACAGGGATATCAAATCCAGCAACATTATGTTGGATTCAAATTTCAACGTCAAGCTTGGGGATTTCGGGCTAGCTCGACTTGTGGACCATGGAAAACAGTCGGAAACAACAATCGTAGCTGGAACCAGAGGCTACATGGCTCTGGAATATGTTACCACAGGAAAGGCTAGCAAGGAATCGGATGTTTACAGCTTCGGAGTTGTTGCTCTGGAAATATCCTGCGGAAGGAAACCTATTGATCTTACGTTGATAAGCACTCAAATAAATATGGTGCAGTGGGTTTGGGAGCTCTATGGACAAGGGAAAGTCATTGAAGCCGCCGATCCTCTACTTTCAGGAGAATTCGATGAGAAGCAAATGGAATGCTTGATGATTGTTGGGTTATGGTGTGCTCATCCGGATTACAGTATGAGGCCTTCAATACAACAAGCAATTCAAGTGCTTAACTTCGAAGTTCCATTGCCTAGTCTACCACTACATATGCCGATGGCCACTTTTCCTCCTTCAATATCATTATCAACGTTGTCTGGTTATACCACCAGCTCTGTAGGAGGGCAAGCTGAGTCTTCAGGCAACGGCTATACCAACAATTCCTCACATTTCACAACATCTCCTGCGACAGCATCACTACAGTAA

Protein Analysis

695

Amino Acids

76.26

Weight (kDa)

5.78

Isoelectric Point (pI)

25.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 40 - 280 3.3e-58 Legume lectin domain
Pkinase PF00069 364 - 630 1.3e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 366 - 572 1.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 51
AasI GACNNNNNNGTC 1 cut(s) 197
Acc36I ACCTGC 1 cut(s) 51
Acc65I GGTACC 1 cut(s) 698
AccB1I GGYRCC 4 cut(s) 434, 454, 698, 1278
AccB7I CCANNNNNTGG 4 cut(s) 597, 709, 857, 875
AccI GTMKAC 1 cut(s) 1921
AccII CGCG 1 cut(s) 285
AccIII TCCGGA 1 cut(s) 1849
AciI CCGC 5 cut(s) 239, 283, 491, 1674, 1770
AclI AACGTT 1 cut(s) 1973
AclWI GGATC 7 cut(s) 38, 393, 406, 805, 995, 1238, 1769
AcoI YGGCCR 1 cut(s) 1941
AcsI RAATTY 3 cut(s) 1022, 1492, 1793
AcuI CTGAAG 1 cut(s) 2004
AcyI GRCGYC 1 cut(s) 564
AfaI GTAC 7 cut(s) 53, 479, 700, 746, 1011, 1058, 1316
AfiI CCNNNNNNNGG 8 cut(s) 451, 464, 597, 709, 820, 857, 875, 1677
AhlI ACTAGT 1 cut(s) 892
AjiI CACGTC 1 cut(s) 462
AjnI CCWGG 2 cut(s) 850, 868
Alw21I GWGCWC 4 cut(s) 807, 1299, 1743, 1846
Alw44I GTGCAC 1 cut(s) 803
AlwI GGATC 7 cut(s) 38, 393, 406, 805, 995, 1238, 1769
Ama87I CYCGRG 1 cut(s) 1071
Aor13HI TCCGGA 1 cut(s) 1849
AoxI GGCC 4 cut(s) 442, 1039, 1865, 1941
ApaLI GTGCAC 1 cut(s) 803
ApeKI GCWGC 1 cut(s) 779
ApoI RAATTY 3 cut(s) 1022, 1492, 1793
Asp718I GGTACC 1 cut(s) 698
AspA2I CCTAGG 1 cut(s) 1043
AspLEI GCGC 1 cut(s) 391
AspS9I GGNCC 2 cut(s) 1040, 1537
AsuHPI GGTGA 5 cut(s) 202, 319, 716, 874, 892
AsuII TTCGAA 1 cut(s) 1902
AsuNHI GCTAGC 2 cut(s) 1522, 1619
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 1 cut(s) 1537
AvrII CCTAGG 1 cut(s) 1043
BaeGI GKGCMC 2 cut(s) 439, 807
BalI TGGCCA 1 cut(s) 1943
BamHI GGATCC 1 cut(s) 398
BanI GGYRCC 4 cut(s) 434, 454, 698, 1278
BanII GRGCYC 2 cut(s) 1299, 1743
BarI GAAGNNNNNNTAC 4 cut(s) 1040, 1072, 1852, 1884
BauI CACGAG 2 cut(s) 817, 1259
BbsI GAAGAC 1 cut(s) 2010
Bbv12I GWGCWC 4 cut(s) 807, 1299, 1743, 1846
BbvI GCAGC 1 cut(s) 766
BccI CCATC 5 cut(s) 689, 703, 851, 1350, 1933
BceAI ACGGC 1 cut(s) 2044
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 2 cut(s) 852, 870
BciVI GTATCC 1 cut(s) 1192
BcuI ACTAGT 1 cut(s) 892
BfaI CTAG 7 cut(s) 374, 654, 893, 1044, 1523, 1620, 1917
BfmI CTRYAG 2 cut(s) 1998, 2081
BfoI RGCGCY 1 cut(s) 392
BfuAI ACCTGC 1 cut(s) 51
BfuI GTATCC 1 cut(s) 1192
BglII AGATCT 1 cut(s) 614
BisI GCNGC 2 cut(s) 780, 1770
BlnI CCTAGG 1 cut(s) 1043
BlsI GCNGC 2 cut(s) 781, 1771
BmcAI AGTACT 2 cut(s) 53, 746
Bme1390I CCNGG 2 cut(s) 852, 870
Bme18I GGWCC 1 cut(s) 1537
BmeT110I CYCGRG 1 cut(s) 1071
BmgBI CACGTC 1 cut(s) 462
BmgT120I GGNCC 2 cut(s) 1040, 1537
BmiI GGNNCC 7 cut(s) 353, 400, 436, 456, 700, 1280, 1576
BmrFI CCNGG 2 cut(s) 852, 870
BmsI GCATC 3 cut(s) 1226, 1258, 2084
BmtI GCTAGC 2 cut(s) 1526, 1623
BpiI GAAGAC 1 cut(s) 2010
BplI GAGNNNNNCTC 2 cut(s) 423, 455
BpmI CTGGAG 1 cut(s) 639
Bpu10I CCTNAGC 1 cut(s) 1244
Bpu14I TTCGAA 1 cut(s) 1902
BpuEI CTTGAG 1 cut(s) 1380
Bsa29I ATCGAT 1 cut(s) 339
BsaBI GATNNNNATC 2 cut(s) 999, 1341
BsaHI GRCGYC 1 cut(s) 564
BsaWI WCCGGW 3 cut(s) 143, 296, 1849
BsaXI ACNNNNNCTCC 8 cut(s) 261, 291, 846, 876, 1936, 1966, 2047, 2077
Bsc4I CCNNNNNNNGG 8 cut(s) 451, 464, 597, 709, 820, 857, 875, 1677
Bse118I RCCGGY 1 cut(s) 542
Bse3DI GCAATG 1 cut(s) 1910
Bse8I GATNNNNATC 2 cut(s) 999, 1341
BseAI TCCGGA 1 cut(s) 1849
BseBI CCWGG 2 cut(s) 852, 870
BseCI ATCGAT 1 cut(s) 339
BseGI GGATG 3 cut(s) 413, 1639, 1846
BseJI GATNNNNATC 2 cut(s) 999, 1341
BseLI CCNNNNNNNGG 8 cut(s) 451, 464, 597, 709, 820, 857, 875, 1677
BseMI GCAATG 1 cut(s) 1910
BseMII CTCAG 1 cut(s) 2004
BseRI GAGGAG 4 cut(s) 269, 438, 441, 444
BseSI GKGCMC 2 cut(s) 439, 807
BseXI GCAGC 1 cut(s) 766
BsgI GTGCAG 2 cut(s) 1436, 1745
Bsh1236I CGCG 1 cut(s) 285
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 4 cut(s) 444, 1041, 1867, 1943
BshNI GGYRCC 4 cut(s) 434, 454, 698, 1278
BshVI ATCGAT 1 cut(s) 339
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 4 cut(s) 807, 1299, 1743, 1846
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 4 cut(s) 144, 297, 543, 1850
BslFI GGGAC 1 cut(s) 1048
BslI CCNNNNNNNGG 8 cut(s) 451, 464, 597, 709, 820, 857, 875, 1677
BsmFI GGGAC 1 cut(s) 1048
BsmI GAATGC 1 cut(s) 1820
BsnI GGCC 4 cut(s) 444, 1041, 1867, 1943
BsoBI CYCGRG 1 cut(s) 1071
Bsp119I TTCGAA 1 cut(s) 1902
Bsp1286I GDGCHC 5 cut(s) 439, 807, 1299, 1743, 1846
Bsp13I TCCGGA 1 cut(s) 1849
Bsp143I GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
Bsp19I CCATGG 2 cut(s) 1005, 1540
BspACI CCGC 5 cut(s) 239, 283, 491, 1674, 1770
BspANI GGCC 4 cut(s) 444, 1041, 1867, 1943
BspCNI CTCAG 1 cut(s) 2005
BspDI ATCGAT 1 cut(s) 339
BspEI TCCGGA 1 cut(s) 1849
BspFNI CGCG 1 cut(s) 285
BspHI TCATGA 1 cut(s) 33
BspLI GGNNCC 7 cut(s) 353, 400, 436, 456, 700, 1280, 1576
BspMI ACCTGC 1 cut(s) 51
BspOI GCTAGC 2 cut(s) 1526, 1623
BspPI GGATC 7 cut(s) 38, 393, 406, 805, 995, 1238, 1769
BspT104I TTCGAA 1 cut(s) 1902
BspT107I GGYRCC 4 cut(s) 434, 454, 698, 1278
BsrDI GCAATG 1 cut(s) 1910
BsrFI RCCGGY 1 cut(s) 542
BssAI RCCGGY 1 cut(s) 542
BssMI GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
BssNI GRCGYC 1 cut(s) 564
BssSI CACGAG 2 cut(s) 817, 1259
BssT1I CCWWGG 6 cut(s) 582, 591, 1005, 1043, 1185, 1540
Bst2BI CACGAG 2 cut(s) 817, 1259
Bst2UI CCWGG 2 cut(s) 852, 870
Bst4CI ACNGT 5 cut(s) 640, 1328, 1551, 1859, 2085
Bst6I CTCTTC 2 cut(s) 92, 965
BstACI GRCGYC 1 cut(s) 564
BstBI TTCGAA 1 cut(s) 1902
BstC8I GCNNGC 4 cut(s) 306, 1524, 1621, 2010
BstDEI CTNAG 5 cut(s) 668, 792, 1194, 1244, 2013
BstDSI CCRYGG 3 cut(s) 450, 1005, 1540
BstENI CCTNNNNNAGG 1 cut(s) 1675
BstF5I GGATG 3 cut(s) 413, 1639, 1846
BstFNI CGCG 1 cut(s) 285
BstH2I RGCGCY 1 cut(s) 392
BstHHI GCGC 1 cut(s) 391
BstKTI GATC 9 cut(s) 33, 401, 617, 736, 813, 1003, 1233, 1693, 1777
BstMBI GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 2 cut(s) 788, 797
BstNI CCWGG 2 cut(s) 852, 870
BstNSI RCATGY 2 cut(s) 182, 1321
BstSCI CCNGG 2 cut(s) 850, 868
BstSFI CTRYAG 2 cut(s) 1998, 2081
BstSLI GKGCMC 2 cut(s) 439, 807
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 1 cut(s) 766
BstV2I GAAGAC 1 cut(s) 2010
BstX2I RGATCY 4 cut(s) 398, 614, 810, 1000
BstYI RGATCY 4 cut(s) 398, 614, 810, 1000
Bsu15I ATCGAT 1 cut(s) 339
BsuI GTATCC 1 cut(s) 1192
BsuRI GGCC 4 cut(s) 444, 1041, 1867, 1943
BsuTUI ATCGAT 1 cut(s) 339
BtgI CCRYGG 3 cut(s) 450, 1005, 1540
BtrI CACGTC 1 cut(s) 462
BtsCI GGATG 3 cut(s) 413, 1639, 1846
BtsI GCAGTG 1 cut(s) 1733
BtsIMutI CAGTG 1 cut(s) 1733
BveI ACCTGC 1 cut(s) 51
Cac8I GCNNGC 4 cut(s) 306, 1524, 1621, 2010
CciI TCATGA 1 cut(s) 33
CfoI GCGC 1 cut(s) 391
Cfr10I RCCGGY 1 cut(s) 542
Cfr13I GGNCC 2 cut(s) 1040, 1537
ClaI ATCGAT 1 cut(s) 339
CseI GACGC 1 cut(s) 572
Csp6I GTAC 7 cut(s) 52, 478, 699, 745, 1010, 1057, 1315
CspCI CAANNNNNGTGG 1 cut(s) 36
CviQI GTAC 7 cut(s) 52, 478, 699, 745, 1010, 1057, 1315
DdeI CTNAG 5 cut(s) 668, 792, 1194, 1244, 2013
DpnI GATC 9 cut(s) 32, 400, 616, 735, 812, 1002, 1232, 1692, 1776
DpnII GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
DrdI GACNNNNNNGTC 1 cut(s) 197
DseDI GACNNNNNNGTC 1 cut(s) 197
EaeI YGGCCR 1 cut(s) 1941
Eam1104I CTCTTC 2 cut(s) 92, 965
EarI CTCTTC 2 cut(s) 92, 965
EciI GGCGGA 1 cut(s) 254
Ecl136II GAGCTC 2 cut(s) 1297, 1741
Eco130I CCWWGG 6 cut(s) 582, 591, 1005, 1043, 1185, 1540
Eco147I AGGCCT 1 cut(s) 1867
Eco24I GRGCYC 2 cut(s) 1299, 1743
Eco32I GATATC 2 cut(s) 505, 1462
Eco47I GGWCC 1 cut(s) 1537
Eco53kI GAGCTC 2 cut(s) 1297, 1741
Eco57I CTGAAG 1 cut(s) 2004
Eco88I CYCGRG 1 cut(s) 1071
EcoICRI GAGCTC 2 cut(s) 1297, 1741
EcoNI CCTNNNNNAGG 1 cut(s) 1675
EcoO109I RGGNCCY 1 cut(s) 1040
EcoRI GAATTC 1 cut(s) 1793
EcoRII CCWGG 2 cut(s) 850, 868
EcoRV GATATC 2 cut(s) 505, 1462
EcoT14I CCWWGG 6 cut(s) 582, 591, 1005, 1043, 1185, 1540
EcoT22I ATGCAT 1 cut(s) 1219
EcoT38I GRGCYC 2 cut(s) 1299, 1743
ErhI CCWWGG 6 cut(s) 582, 591, 1005, 1043, 1185, 1540
FaqI GGGAC 1 cut(s) 1048
FauNDI CATATG 2 cut(s) 1162, 1932
FblI GTMKAC 1 cut(s) 1921
Fnu4HI GCNGC 2 cut(s) 780, 1770
FokI GGATG 3 cut(s) 400, 1646, 1833
FriOI GRGCYC 2 cut(s) 1299, 1743
Fsp4HI GCNGC 2 cut(s) 780, 1770
FspBI CTAG 7 cut(s) 374, 654, 893, 1044, 1523, 1620, 1917
GlaI GCGC 1 cut(s) 390
GluI GCNGC 2 cut(s) 780, 1770
GsuI CTGGAG 1 cut(s) 639
HaeII RGCGCY 1 cut(s) 392
HaeIII GGCC 4 cut(s) 444, 1041, 1867, 1943
HapII CCGG 4 cut(s) 144, 297, 543, 1850
HgaI GACGC 1 cut(s) 572
HhaI GCGC 1 cut(s) 391
Hin1I GRCGYC 1 cut(s) 564
Hin6I GCGC 1 cut(s) 389
HinP1I GCGC 1 cut(s) 389
HincII GTYRAC 1 cut(s) 942
HindII GTYRAC 1 cut(s) 942
HindIII AAGCTT 5 cut(s) 244, 302, 1103, 1360, 1505
HpaII CCGG 4 cut(s) 144, 297, 543, 1850
HphI GGTGA 5 cut(s) 202, 319, 716, 874, 892
Hpy166II GTNNAC 7 cut(s) 625, 805, 865, 942, 1537, 1639, 1922
Hpy188I TCNGA 8 cut(s) 30, 206, 422, 738, 1222, 1555, 1633, 1649
Hpy188III TCNNGA 9 cut(s) 34, 133, 465, 511, 618, 1595, 1661, 1788, 1850
Hpy8I GTNNAC 7 cut(s) 625, 805, 865, 942, 1537, 1639, 1922
Hpy99I CGWCG 2 cut(s) 566, 787
HpyAV CCTTC 9 cut(s) 86, 114, 133, 283, 688, 971, 1671, 1878, 1965
HpyCH4III ACNGT 5 cut(s) 640, 1328, 1551, 1859, 2085
HpyCH4IV ACGT 4 cut(s) 461, 1500, 1697, 1973
HpyCH4V TGCA 9 cut(s) 46, 110, 365, 805, 1091, 1217, 1264, 1453, 1726
HpyF10VI GCNNNNNNNGC 2 cut(s) 788, 797
HpyF3I CTNAG 5 cut(s) 668, 792, 1194, 1244, 2013
HpySE526I ACGT 4 cut(s) 461, 1500, 1697, 1973
Hsp92I GRCGYC 1 cut(s) 564
HspAI GCGC 1 cut(s) 389
Kpn2I TCCGGA 1 cut(s) 1849
KpnI GGTACC 1 cut(s) 702
Kzo9I GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
LmnI GCTCC 2 cut(s) 1302, 1738
Lsp1109I GCAGC 1 cut(s) 766
LweI GCATC 3 cut(s) 1226, 1258, 2084
MaeI CTAG 7 cut(s) 374, 654, 893, 1044, 1523, 1620, 1917
MaeII ACGT 4 cut(s) 461, 1500, 1697, 1973
MaeIII GTNAC 2 cut(s) 644, 1603
MalI GATC 9 cut(s) 32, 400, 616, 735, 812, 1002, 1232, 1692, 1776
MboI GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
MfeI CAATTG 1 cut(s) 16
MflI RGATCY 4 cut(s) 398, 614, 810, 1000
MhlI GDGCHC 5 cut(s) 439, 807, 1299, 1743, 1846
MlsI TGGCCA 1 cut(s) 1943
MluNI TGGCCA 1 cut(s) 1943
MlyI GAGTC 3 cut(s) 149, 201, 2024
MmeI TCCRAC 4 cut(s) 229, 1352, 1464, 1533
Mox20I TGGCCA 1 cut(s) 1943
Mph1103I ATGCAT 1 cut(s) 1219
MroI TCCGGA 1 cut(s) 1849
MscI TGGCCA 1 cut(s) 1943
MseI TTAA 6 cut(s) 119, 1014, 1173, 1355, 1367, 1896
MslI CAYNNNNRTG 1 cut(s) 45
Msp20I TGGCCA 1 cut(s) 1943
MspI CCGG 4 cut(s) 144, 297, 543, 1850
MspR9I CCNGG 2 cut(s) 852, 870
MunI CAATTG 1 cut(s) 16
Mva1269I GAATGC 1 cut(s) 1820
MvaI CCWGG 2 cut(s) 852, 870
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 2 cut(s) 788, 797
NcoI CCATGG 2 cut(s) 1005, 1540
NdeI CATATG 2 cut(s) 1162, 1932
NdeII GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
NheI GCTAGC 2 cut(s) 1522, 1619
NlaIV GGNNCC 7 cut(s) 353, 400, 436, 456, 700, 1280, 1576
NmeAIII GCCGAG 1 cut(s) 420
NsiI ATGCAT 1 cut(s) 1219
NspI RCATGY 2 cut(s) 182, 1321
NspV TTCGAA 1 cut(s) 1902
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 1 cut(s) 33
PaqCI CACCTGC 1 cut(s) 51
PceI AGGCCT 1 cut(s) 1867
PcsI WCGNNNNNNNCGW 1 cut(s) 447
PctI GAATGC 1 cut(s) 1820
PfeI GAWTC 7 cut(s) 25, 341, 536, 918, 1337, 1487, 1628
PflFI GACNNNGTC 1 cut(s) 758
PflMI CCANNNNNTGG 4 cut(s) 597, 709, 857, 875
PkrI GCNGC 2 cut(s) 781, 1771
PleI GAGTC 3 cut(s) 149, 201, 2023
PpsI GAGTC 3 cut(s) 149, 201, 2023
Psp124BI GAGCTC 2 cut(s) 1299, 1743
Psp1406I AACGTT 1 cut(s) 1973
Psp6I CCWGG 2 cut(s) 850, 868
PspGI CCWGG 2 cut(s) 850, 868
PspN4I GGNNCC 7 cut(s) 353, 400, 436, 456, 700, 1280, 1576
PspPI GGNCC 2 cut(s) 1040, 1537
PspXI VCTCGAGB 1 cut(s) 1071
PsuI RGATCY 4 cut(s) 398, 614, 810, 1000
PsyI GACNNNGTC 1 cut(s) 758
RsaI GTAC 7 cut(s) 53, 479, 700, 746, 1011, 1058, 1316
RsaNI GTAC 7 cut(s) 52, 478, 699, 745, 1010, 1057, 1315
RseI CAYNNNNRTG 1 cut(s) 45
SacI GAGCTC 2 cut(s) 1299, 1743
SaqAI TTAA 6 cut(s) 119, 1014, 1173, 1355, 1367, 1896
SatI GCNGC 2 cut(s) 780, 1770
Sau3AI GATC 9 cut(s) 30, 398, 614, 733, 810, 1000, 1230, 1690, 1774
Sau96I GGNCC 2 cut(s) 1040, 1537
ScaI AGTACT 2 cut(s) 53, 746
SchI GAGTC 3 cut(s) 149, 201, 2024
ScrFI CCNGG 2 cut(s) 852, 870
SduI GDGCHC 5 cut(s) 439, 807, 1299, 1743, 1846
SfaNI GCATC 3 cut(s) 1226, 1258, 2084
SfcI CTRYAG 2 cut(s) 1998, 2081
Sfr274I CTCGAG 1 cut(s) 1071
SfuI TTCGAA 1 cut(s) 1902
SgrAI CRCCGGYG 1 cut(s) 542
SinI GGWCC 1 cut(s) 1537
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 1 cut(s) 45
SmlI CTYRAG 2 cut(s) 1071, 1395
SmoI CTYRAG 2 cut(s) 1071, 1395
SpeI ACTAGT 1 cut(s) 892
SseBI AGGCCT 1 cut(s) 1867
SsiI CCGC 5 cut(s) 239, 283, 491, 1674, 1770
SspMI CTAG 7 cut(s) 374, 654, 893, 1044, 1523, 1620, 1917
SstI GAGCTC 2 cut(s) 1299, 1743
StuI AGGCCT 1 cut(s) 1867
StyD4I CCNGG 2 cut(s) 850, 868
StyI CCWWGG 6 cut(s) 582, 591, 1005, 1043, 1185, 1540
TaaI ACNGT 5 cut(s) 640, 1328, 1551, 1859, 2085
TaiI ACGT 4 cut(s) 464, 1503, 1700, 1976
TaqI TCGA 9 cut(s) 189, 253, 339, 561, 1072, 1252, 1528, 1797, 1902
TaqII GACCGA 1 cut(s) 239
TatI WGTACW 3 cut(s) 51, 744, 1314
TauI GCSGC 1 cut(s) 1772
TfiI GAWTC 7 cut(s) 25, 341, 536, 918, 1337, 1487, 1628
Tru1I TTAA 6 cut(s) 119, 1014, 1173, 1355, 1367, 1896
Tru9I TTAA 6 cut(s) 119, 1014, 1173, 1355, 1367, 1896
TscAI CASTG 1 cut(s) 1733
TseI GCWGC 1 cut(s) 779
TspDTI ATGAA 8 cut(s) 243, 373, 517, 910, 1011, 1132, 1169, 1299
TspGWI ACGGA 2 cut(s) 364, 411
TspRI CASTG 1 cut(s) 1733
Tth111I GACNNNGTC 1 cut(s) 758
Van91I CCANNNNNTGG 4 cut(s) 597, 709, 857, 875
VneI GTGCAC 1 cut(s) 803
VpaK11BI GGWCC 1 cut(s) 1537
XagI CCTNNNNNAGG 1 cut(s) 1675
XapI RAATTY 3 cut(s) 1022, 1492, 1793
XceI RCATGY 2 cut(s) 182, 1321
XcmI CCANNNNNNNNNTGG 1 cut(s) 1585
XhoI CTCGAG 1 cut(s) 1071
XmaJI CCTAGG 1 cut(s) 1043
XmiI GTMKAC 1 cut(s) 1921
XspI CTAG 7 cut(s) 374, 654, 893, 1044, 1523, 1620, 1917
ZrmI AGTACT 2 cut(s) 53, 746
Zsp2I ATGCAT 1 cut(s) 1219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.