26S proteasome non-atpase regulatory subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Reticulon | PF02453 | 18 - 169 | 4.5e-40 | Reticulon |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 615 |
| AciI | CCGC | 2 cut(s) | 173, 384 |
| AclWI | GGATC | 1 cut(s) | 432 |
| AcoI | YGGCCR | 1 cut(s) | 174 |
| AcsI | RAATTY | 2 cut(s) | 244, 324 |
| AfaI | GTAC | 2 cut(s) | 491, 545 |
| AgsI | TTSAA | 2 cut(s) | 148, 317 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 266, 298 |
| Alw26I | GTCTC | 3 cut(s) | 281, 409, 602 |
| AlwI | GGATC | 1 cut(s) | 432 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 50 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 1 cut(s) | 347 |
| ApoI | RAATTY | 2 cut(s) | 244, 324 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| AsuC2I | CCSGG | 1 cut(s) | 376 |
| AsuHPI | GGTGA | 4 cut(s) | 424, 535, 592, 604 |
| BauI | CACGAG | 1 cut(s) | 405 |
| BbsI | GAAGAC | 1 cut(s) | 281 |
| BbvI | GCAGC | 1 cut(s) | 334 |
| BccI | CCATC | 1 cut(s) | 324 |
| BceAI | ACGGC | 1 cut(s) | 294 |
| BcnI | CCSGG | 1 cut(s) | 376 |
| BcoDI | GTCTC | 3 cut(s) | 281, 409, 602 |
| BisI | GCNGC | 3 cut(s) | 174, 348, 384 |
| BlsI | GCNGC | 3 cut(s) | 175, 349, 385 |
| Bme1390I | CCNGG | 1 cut(s) | 376 |
| BmrFI | CCNGG | 1 cut(s) | 376 |
| BmrI | ACTGGG | 1 cut(s) | 33 |
| BmuI | ACTGGG | 1 cut(s) | 33 |
| BpiI | GAAGAC | 1 cut(s) | 281 |
| Bpu10I | CCTNAGC | 1 cut(s) | 218 |
| BpuEI | CTTGAG | 1 cut(s) | 488 |
| BpuMI | CCSGG | 1 cut(s) | 376 |
| Bse1I | ACTGG | 1 cut(s) | 39 |
| BseGI | GGATG | 2 cut(s) | 339, 565 |
| BseNI | ACTGG | 1 cut(s) | 39 |
| BseRI | GAGGAG | 2 cut(s) | 523, 530 |
| BseXI | GCAGC | 1 cut(s) | 334 |
| BsgI | GTGCAG | 1 cut(s) | 333 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BsiSI | CCGG | 1 cut(s) | 375 |
| BslFI | GGGAC | 1 cut(s) | 391 |
| BsmAI | GTCTC | 3 cut(s) | 281, 409, 602 |
| BsmFI | GGGAC | 1 cut(s) | 391 |
| BsnI | GGCC | 1 cut(s) | 176 |
| Bsp143I | GATC | 2 cut(s) | 13, 424 |
| BspACI | CCGC | 2 cut(s) | 173, 384 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspPI | GGATC | 1 cut(s) | 432 |
| BsrI | ACTGG | 1 cut(s) | 39 |
| BssMI | GATC | 2 cut(s) | 13, 424 |
| BssSI | CACGAG | 1 cut(s) | 405 |
| Bst2BI | CACGAG | 1 cut(s) | 405 |
| Bst4CI | ACNGT | 3 cut(s) | 52, 160, 598 |
| BstDEI | CTNAG | 1 cut(s) | 218 |
| BstF5I | GGATG | 2 cut(s) | 339, 565 |
| BstKTI | GATC | 2 cut(s) | 16, 427 |
| BstMAI | GTCTC | 3 cut(s) | 281, 409, 602 |
| BstMBI | GATC | 2 cut(s) | 13, 424 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 380 |
| BstNSI | RCATGY | 1 cut(s) | 217 |
| BstSCI | CCNGG | 1 cut(s) | 374 |
| BstV1I | GCAGC | 1 cut(s) | 334 |
| BstV2I | GAAGAC | 1 cut(s) | 281 |
| BstX2I | RGATCY | 1 cut(s) | 424 |
| BstYI | RGATCY | 1 cut(s) | 424 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BtsCI | GGATG | 2 cut(s) | 339, 565 |
| CaiI | CAGNNNCTG | 1 cut(s) | 50 |
| Csp6I | GTAC | 2 cut(s) | 490, 544 |
| CviAII | CATG | 6 cut(s) | 168, 178, 214, 309, 463, 553 |
| CviJI | RGCY | 3 cut(s) | 176, 281, 347 |
| CviKI_1 | RGCY | 3 cut(s) | 176, 281, 347 |
| CviQI | GTAC | 2 cut(s) | 490, 544 |
| DdeI | CTNAG | 1 cut(s) | 218 |
| DpnI | GATC | 2 cut(s) | 15, 426 |
| DpnII | GATC | 2 cut(s) | 13, 424 |
| EaeI | YGGCCR | 1 cut(s) | 174 |
| EcoRI | GAATTC | 1 cut(s) | 324 |
| FaeI | CATG | 6 cut(s) | 171, 181, 217, 312, 466, 556 |
| FaqI | GGGAC | 1 cut(s) | 391 |
| FatI | CATG | 6 cut(s) | 167, 177, 213, 308, 462, 552 |
| Fnu4HI | GCNGC | 3 cut(s) | 174, 348, 384 |
| FokI | GGATG | 2 cut(s) | 346, 572 |
| Fsp4HI | GCNGC | 3 cut(s) | 174, 348, 384 |
| GluI | GCNGC | 3 cut(s) | 174, 348, 384 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 375 |
| Hin1II | CATG | 6 cut(s) | 171, 181, 217, 312, 466, 556 |
| HpaII | CCGG | 1 cut(s) | 375 |
| HphI | GGTGA | 4 cut(s) | 424, 535, 592, 604 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 46 |
| Hpy188III | TCNNGA | 2 cut(s) | 505, 574 |
| HpyAV | CCTTC | 4 cut(s) | 314, 446, 520, 619 |
| HpyCH4III | ACNGT | 3 cut(s) | 52, 160, 598 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 1 cut(s) | 350 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 380 |
| HpyF3I | CTNAG | 1 cut(s) | 218 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92II | CATG | 6 cut(s) | 171, 181, 217, 312, 466, 556 |
| Kzo9I | GATC | 2 cut(s) | 13, 424 |
| LpnPI | CCDG | 7 cut(s) | 47, 52, 372, 388, 432, 486, 518 |
| Lsp1109I | GCAGC | 1 cut(s) | 334 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 6 cut(s) | 52, 187, 265, 396, 592, 598 |
| MalI | GATC | 2 cut(s) | 15, 426 |
| MboI | GATC | 2 cut(s) | 13, 424 |
| MboII | GAAGA | 4 cut(s) | 88, 91, 286, 329 |
| MflI | RGATCY | 1 cut(s) | 424 |
| MluCI | AATT | 4 cut(s) | 26, 162, 244, 324 |
| MmeI | TCCRAC | 1 cut(s) | 240 |
| MnlI | CCTC | 7 cut(s) | 66, 249, 256, 480, 501, 508, 534 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MseI | TTAA | 1 cut(s) | 228 |
| MspA1I | CMGCKG | 1 cut(s) | 386 |
| MspI | CCGG | 1 cut(s) | 375 |
| MspR9I | CCNGG | 1 cut(s) | 376 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 380 |
| NciI | CCSGG | 1 cut(s) | 376 |
| NdeII | GATC | 2 cut(s) | 13, 424 |
| NlaIII | CATG | 6 cut(s) | 171, 181, 217, 312, 466, 556 |
| NmuCI | GTSAC | 3 cut(s) | 52, 592, 598 |
| NspI | RCATGY | 1 cut(s) | 217 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PkrI | GCNGC | 3 cut(s) | 175, 349, 385 |
| PsiI | TTATAA | 1 cut(s) | 615 |
| PstNI | CAGNNNCTG | 1 cut(s) | 50 |
| PsuI | RGATCY | 1 cut(s) | 424 |
| RsaI | GTAC | 2 cut(s) | 491, 545 |
| RsaNI | GTAC | 2 cut(s) | 490, 544 |
| SaqAI | TTAA | 1 cut(s) | 228 |
| SatI | GCNGC | 3 cut(s) | 174, 348, 384 |
| Sau3AI | GATC | 2 cut(s) | 13, 424 |
| ScrFI | CCNGG | 1 cut(s) | 376 |
| SmlI | CTYRAG | 1 cut(s) | 503 |
| SmoI | CTYRAG | 1 cut(s) | 503 |
| Sse9I | AATT | 4 cut(s) | 26, 162, 244, 324 |
| SsiI | CCGC | 2 cut(s) | 173, 384 |
| StyD4I | CCNGG | 1 cut(s) | 374 |
| TaaI | ACNGT | 3 cut(s) | 52, 160, 598 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TaqI | TCGA | 2 cut(s) | 304, 328 |
| TasI | AATT | 4 cut(s) | 26, 162, 244, 324 |
| TauI | GCSGC | 2 cut(s) | 176, 386 |
| Tru1I | TTAA | 1 cut(s) | 228 |
| Tru9I | TTAA | 1 cut(s) | 228 |
| TseFI | GTSAC | 3 cut(s) | 52, 592, 598 |
| TseI | GCWGC | 1 cut(s) | 347 |
| Tsp45I | GTSAC | 3 cut(s) | 52, 592, 598 |
| TspDTI | ATGAA | 4 cut(s) | 156, 172, 267, 576 |
| XapI | RAATTY | 2 cut(s) | 244, 324 |
| XceI | RCATGY | 1 cut(s) | 217 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |