Rroxscaffold_1G00047730

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67516647 .. 67518910
2264 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047730.1

Sequence Viewer

Length: 2049 bp
ATGACAATTCTGCGAGCAGGTTCCCTTCTCTCTGTCCTAACAAGAATTTACATCTTCTTTATGCTAACCCCTTGTGCAACTCCACTAAACTTCGACTTCACCTCCTTCAGTACTAATGACAATATGAGTTTAGTCCTAGAGGGAGATGCTGCTTTCAATATTGACGACCTCCAACTCACCCGAAGCGCCGACACCACCAACGGGAGCGTCGGTCGAGTCACCTACTCCAGACCCTTCCTTCTGTGGAATACATCCACCGGAGAAAGCGCAGATTTCACCTCAAATTTTACATTCTATATCGAGTCTGCAAATAACTCGAAGTACGGCGACGGGCTAGCTTTCTTTATAGAGCCAAACGGGTCCTTACTTAACAGAACCCTCGGCAGAGGTAGCAGTCTCGGCCTGCCCGTAGACCCAAACAGTAACGTGTCAAGTAATCAGCACTCTTTTGTGGCTGTGGAATTCGATATCTTCCACAATGGTGGCAAAACTGTGGAGGACCCTGCTGGCGATCACGTGGGTATCGACATCAACTCAGTAAAGTCCATTGAAACCCTTCCTTGGAATGGTAGTGTCCTGGAGGAAAAAGGCAACAGAGCTTGGGTTAGTTATGATTCTAGCTCAAAAATACTCAGCGTGTCCTACATCACTTATGACCGCAATGGTATCCCAGATCGGAAAAAAATTCAGCGCATGGTTAATTTGAGGCAGATATTACCGGAAGTGGTCGTTGTTGGGTTCTCCGCTTCGACTGGTACTCAAACTGCTGTGCACAAGATCAACTCATGGAGTTTTAATTCAACTTTAGTACTTCCTGCGCCAAGCAACAAGACAACAGGAAACGACATGTTCAATGTAAGACTTGCGGTTGGATTGAGTATTGGTGGATGCATCATTATCTTGGTTAGTGGGTTGGGTCTGGTTCGTCTTAAATTTTGGAAGAAGAAGGAACAAGTAGAGGAAAGTGATGAGATTGAAGACCCTATGGAACTCAATGACTCGATGGATGAGGATTTCGAAAGAGGCACAGGGCCTAGGAAGTTTTCATACAACGAGTTGGCTCATGCGACGAGTAATTTTAACGAGGGAGAGAAGCTTGGAGAGGGAGGATTTGGTGAGGTTTACAAAGGCTTCATAGAAGACTTGAACTCATATGTCGCTGTTAAGAAGATATCAAAGAGATCTAAACAAGGGCTGAAAGAGTATGCTGCAGAAGTAAGGATCATAAGTCGGCTTAGGCACCGTAATCTGGTGAACCTCATTGGTTGGTGCCATGAAAAAAAACTACTCCTTGTGTACGAGTTCATGCCCAATGGTAGCTTAGATTCTCATCTATTCAAAGAGCAAAACTTGTTGGAGTGGAAGTTGAGATACAAAATTGCTCAAGGTTTGGCCTCCGGGTTGCTCTACCTACATGAAGAATGGGAACAATGTGTGTTACACAGAGATATCAAGTCTAGCAATGTTATGTTGGATTCGAATTTCAACGCGAAACTTGGGGATTTCGGGTTAGCTCGACTTGTGGACCATGGAGAACAGGCGCAAACCACGACTGTTGCTGGAACCAGAGGCTACATGGCTTTTGAATATGTTAATACGGGCAAGGCTACTAAGGAATCAGACGTCTACAGTTTTGGAGTAGTTGCATTGGAAATAGCTTGTGGGAGAAAAACCATTGATCATCAGTTCGAAAGTAATCAAATAATTATGCTGGATTGGGTTTGGGAACTTTATGGAGAAGGAAAAGTGATCGAAGCAGCTGACCCAAAATTGTGTGGAGATTACGATGAGAAACAAATGGAGTGCTTGTTGATTGTTGGGATGTGGTGTGCTCATCCGGATTACCATTGTAGGCCTTCAATACAACAAGCGATTCAAGTACTAAACTTTGAAGCTCAATTGCCAATTCTCCCGCCAGAGTTGCCGGTGCCAAAATTTCCTCCTATGTCGGACTCAGCTGCTGGTTCCGGAATTTTAGGAAGCAAAACTGAGTCTCATGGTACTGCATCTTCTTCAACAAATTCGCACTCATCAATTTTAGTTCGGTAA

Protein Analysis

682

Amino Acids

75.65

Weight (kDa)

5.44

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 272 1.2e-63 Legume lectin domain
Lectin_L-type_dom PF18483 64 - 261 3.1e-09 Legume lectin beta-barrel domain
Pkinase PF00069 360 - 626 2.1e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 560 4.4e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1626
Acc36I ACCTGC 1 cut(s) 8
AccB1I GGYRCC 3 cut(s) 1239, 1269, 1927
AccI GTMKAC 2 cut(s) 411, 1626
AccII CGCG 1 cut(s) 1490
AccIII TCCGGA 2 cut(s) 1837, 1967
AciI CCGC 4 cut(s) 658, 744, 866, 1913
AclWI GGATC 1 cut(s) 1229
AcsI RAATTY 9 cut(s) 45, 283, 461, 684, 932, 1480, 1934, 1971, 2020
AcuI CTGAAG 1 cut(s) 91
AcvI CACGTG 1 cut(s) 517
AcyI GRCGYC 1 cut(s) 1623
AfaI GTAC 7 cut(s) 112, 323, 757, 810, 1298, 1881, 2002
AfiI CCNNNNNNNGG 4 cut(s) 201, 561, 566, 1249
AflIII ACRYGT 2 cut(s) 426, 846
AjnI CCWGG 1 cut(s) 576
AleI CACNNNNGTG 1 cut(s) 480
Alw21I GWGCWC 2 cut(s) 774, 1834
Alw26I GTCTC 2 cut(s) 401, 1998
Alw44I GTGCAC 1 cut(s) 770
AlwI GGATC 1 cut(s) 1229
AlwNI CAGNNNCTG 1 cut(s) 1961
Aor13HI TCCGGA 2 cut(s) 1837, 1967
AoxI GGCC 4 cut(s) 400, 1031, 1392, 1853
ApaLI GTGCAC 1 cut(s) 770
ApeKI GCWGC 4 cut(s) 149, 1208, 1757, 1958
ApoI RAATTY 9 cut(s) 45, 283, 461, 684, 932, 1480, 1934, 1971, 2020
Asp700I GAANNNNTTC 1 cut(s) 555
AspA2I CCTAGG 1 cut(s) 1034
AspLEI GCGC 5 cut(s) 188, 269, 693, 820, 1543
AspS9I GGNCC 4 cut(s) 360, 499, 1031, 1525
AsuC2I CCSGG 1 cut(s) 1399
AsuHPI GGTGA 6 cut(s) 91, 169, 211, 268, 1127, 1264
AsuII TTCGAA 3 cut(s) 1017, 1478, 1689
AsuNHI GCTAGC 1 cut(s) 334
AvaII GGWCC 3 cut(s) 360, 499, 1525
AvrII CCTAGG 1 cut(s) 1034
BaeGI GKGCMC 1 cut(s) 774
BaeI ACNNNNGTAYC 2 cut(s) 505, 538
BanI GGYRCC 3 cut(s) 1239, 1269, 1927
BarI GAAGNNNNNNTAC 6 cut(s) 1031, 1063, 1355, 1387, 1993, 2025
BbrPI CACGTG 1 cut(s) 517
BbsI GAAGAC 2 cut(s) 984, 1146
Bbv12I GWGCWC 2 cut(s) 774, 1834
BbvI GCAGC 4 cut(s) 136, 1195, 1769, 1945
BccI CCATC 1 cut(s) 997
BceAI ACGGC 1 cut(s) 340
BcgI CGANNNNNNTGC 2 cut(s) 297, 331
BciT130I CCWGG 1 cut(s) 578
BciVI GTATCC 1 cut(s) 677
BclI TGATCA 1 cut(s) 1678
BcnI CCSGG 1 cut(s) 1399
BcoDI GTCTC 2 cut(s) 401, 1998
BfaI CTAG 5 cut(s) 137, 335, 618, 1035, 1458
BfmI CTRYAG 2 cut(s) 1209, 1627
BfoI RGCGCY 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 8
BfuI GTATCC 1 cut(s) 677
BglII AGATCT 1 cut(s) 1181
BisI GCNGC 4 cut(s) 150, 1209, 1758, 1959
BlnI CCTAGG 1 cut(s) 1034
BlsI GCNGC 4 cut(s) 151, 1210, 1759, 1960
BmcAI AGTACT 3 cut(s) 112, 810, 1881
Bme1390I CCNGG 2 cut(s) 578, 1399
Bme18I GGWCC 3 cut(s) 360, 499, 1525
BmgT120I GGNCC 4 cut(s) 360, 499, 1031, 1525
BmiI GGNNCC 8 cut(s) 22, 361, 501, 1241, 1271, 1564, 1929, 1966
BmrFI CCNGG 2 cut(s) 578, 1399
BmsI GCATC 4 cut(s) 136, 878, 900, 2015
BmtI GCTAGC 1 cut(s) 338
BpiI GAAGAC 2 cut(s) 984, 1146
BpmI CTGGAG 2 cut(s) 211, 599
Bpu10I CCTNAGC 1 cut(s) 1235
Bpu14I TTCGAA 3 cut(s) 1017, 1478, 1689
BpuEI CTTGAG 1 cut(s) 1368
BpuMI CCSGG 1 cut(s) 1399
BsaAI YACGTR 1 cut(s) 517
BsaBI GATNNNNATC 1 cut(s) 1329
BsaHI GRCGYC 1 cut(s) 1623
BsaJI CCNNGG 4 cut(s) 379, 560, 1034, 1528
BsaWI WCCGGW 4 cut(s) 257, 718, 1837, 1967
BsaXI ACNNNNNCTCC 8 cut(s) 86, 116, 196, 226, 1349, 1379, 1793, 1823
Bsc4I CCNNNNNNNGG 4 cut(s) 201, 561, 566, 1249
Bse118I RCCGGY 1 cut(s) 1924
Bse1I ACTGG 1 cut(s) 757
Bse3DI GCAATG 2 cut(s) 667, 1468
Bse8I GATNNNNATC 1 cut(s) 1329
BseAI TCCGGA 2 cut(s) 1837, 1967
BseBI CCWGG 1 cut(s) 578
BseDI CCNNGG 4 cut(s) 379, 560, 1034, 1528
BseGI GGATG 5 cut(s) 251, 893, 1012, 1827, 1834
BseJI GATNNNNATC 1 cut(s) 1329
BseLI CCNNNNNNNGG 4 cut(s) 201, 561, 566, 1249
BseMI GCAATG 2 cut(s) 667, 1468
BseMII CTCAG 4 cut(s) 549, 646, 1968, 1980
BseNI ACTGG 1 cut(s) 757
BseSI GKGCMC 1 cut(s) 774
BseXI GCAGC 4 cut(s) 136, 1195, 1769, 1945
Bsh1236I CGCG 1 cut(s) 1490
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 4 cut(s) 402, 1033, 1394, 1855
BshNI GGYRCC 3 cut(s) 1239, 1269, 1927
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 2 cut(s) 774, 1834
BsiSI CCGG 6 cut(s) 258, 719, 1398, 1838, 1925, 1968
BslI CCNNNNNNNGG 4 cut(s) 201, 561, 566, 1249
BsmAI GTCTC 2 cut(s) 401, 1998
BsnI GGCC 4 cut(s) 402, 1033, 1394, 1855
Bsp119I TTCGAA 3 cut(s) 1017, 1478, 1689
Bsp1286I GDGCHC 2 cut(s) 774, 1834
Bsp13I TCCGGA 2 cut(s) 1837, 1967
Bsp143I GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
Bsp19I CCATGG 1 cut(s) 1528
BspACI CCGC 4 cut(s) 658, 744, 866, 1913
BspANI GGCC 4 cut(s) 402, 1033, 1394, 1855
BspCNI CTCAG 4 cut(s) 548, 645, 1967, 1981
BspEI TCCGGA 2 cut(s) 1837, 1967
BspFNI CGCG 1 cut(s) 1490
BspLI GGNNCC 8 cut(s) 22, 361, 501, 1241, 1271, 1564, 1929, 1966
BspMAI CTGCAG 1 cut(s) 1213
BspMI ACCTGC 1 cut(s) 8
BspOI GCTAGC 1 cut(s) 338
BspPI GGATC 1 cut(s) 1229
BspT104I TTCGAA 3 cut(s) 1017, 1478, 1689
BspT107I GGYRCC 3 cut(s) 1239, 1269, 1927
BsrDI GCAATG 2 cut(s) 667, 1468
BsrFI RCCGGY 1 cut(s) 1924
BsrI ACTGG 1 cut(s) 757
BssAI RCCGGY 1 cut(s) 1924
BssECI CCNNGG 4 cut(s) 379, 560, 1034, 1528
BssMI GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
BssNI GRCGYC 1 cut(s) 1623
BssT1I CCWWGG 3 cut(s) 560, 1034, 1528
Bst2UI CCWGG 1 cut(s) 578
Bst4CI ACNGT 5 cut(s) 422, 493, 1244, 1555, 1631
BstACI GRCGYC 1 cut(s) 1623
BstBAI YACGTR 1 cut(s) 517
BstBI TTCGAA 3 cut(s) 1017, 1478, 1689
BstC8I GCNNGC 4 cut(s) 15, 336, 404, 508
BstDEI CTNAG 7 cut(s) 535, 632, 1235, 1321, 1611, 1954, 1989
BstDSI CCRYGG 1 cut(s) 1528
BstF5I GGATG 5 cut(s) 251, 893, 1012, 1827, 1834
BstFNI CGCG 1 cut(s) 1490
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 5 cut(s) 188, 269, 693, 820, 1543
BstKTI GATC 7 cut(s) 514, 676, 780, 1184, 1224, 1681, 1752
BstMAI GTCTC 2 cut(s) 401, 1998
BstMBI GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
BstMCI CGRYCG 1 cut(s) 214
BstMWI GCNNNNNNNGC 3 cut(s) 390, 399, 1921
BstNI CCWGG 1 cut(s) 578
BstNSI RCATGY 1 cut(s) 850
BstSCI CCNGG 2 cut(s) 576, 1397
BstSFI CTRYAG 2 cut(s) 1209, 1627
BstSLI GKGCMC 1 cut(s) 774
BstUI CGCG 1 cut(s) 1490
BstV1I GCAGC 4 cut(s) 136, 1195, 1769, 1945
BstV2I GAAGAC 2 cut(s) 984, 1146
BstX2I RGATCY 1 cut(s) 1181
BstXI CCANNNNNNTGG 1 cut(s) 482
BstYI RGATCY 1 cut(s) 1181
BsuI GTATCC 1 cut(s) 677
BsuRI GGCC 4 cut(s) 402, 1033, 1394, 1855
BtgI CCRYGG 1 cut(s) 1528
BtsCI GGATG 5 cut(s) 251, 893, 1012, 1827, 1834
BveI ACCTGC 1 cut(s) 8
Cac8I GCNNGC 4 cut(s) 15, 336, 404, 508
CaiI CAGNNNCTG 1 cut(s) 1961
CfoI GCGC 5 cut(s) 188, 269, 693, 820, 1543
Cfr10I RCCGGY 1 cut(s) 1924
Cfr13I GGNCC 4 cut(s) 360, 499, 1031, 1525
CseI GACGC 1 cut(s) 196
Csp6I GTAC 7 cut(s) 111, 322, 756, 809, 1297, 1880, 2001
CspCI CAANNNNNGTGG 2 cut(s) 1537, 1572
CviQI GTAC 7 cut(s) 111, 322, 756, 809, 1297, 1880, 2001
DdeI CTNAG 7 cut(s) 535, 632, 1235, 1321, 1611, 1954, 1989
DpnI GATC 7 cut(s) 513, 675, 779, 1183, 1223, 1680, 1751
DpnII GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
Eco130I CCWWGG 3 cut(s) 560, 1034, 1528
Eco147I AGGCCT 1 cut(s) 1855
Eco32I GATATC 3 cut(s) 469, 1173, 1450
Eco47I GGWCC 3 cut(s) 360, 499, 1525
Eco57I CTGAAG 1 cut(s) 91
Eco72I CACGTG 1 cut(s) 517
EcoO109I RGGNCCY 3 cut(s) 360, 499, 1031
EcoRI GAATTC 1 cut(s) 461
EcoRII CCWGG 1 cut(s) 576
EcoRV GATATC 3 cut(s) 469, 1173, 1450
EcoT14I CCWWGG 3 cut(s) 560, 1034, 1528
EcoT22I ATGCAT 1 cut(s) 893
ErhI CCWWGG 3 cut(s) 560, 1034, 1528
FauI CCCGC 1 cut(s) 1920
FauNDI CATATG 1 cut(s) 1153
FbaI TGATCA 1 cut(s) 1678
FblI GTMKAC 2 cut(s) 411, 1626
Fnu4HI GCNGC 4 cut(s) 150, 1209, 1758, 1959
FokI GGATG 5 cut(s) 238, 900, 1019, 1821, 1834
Fsp4HI GCNGC 4 cut(s) 150, 1209, 1758, 1959
FspBI CTAG 5 cut(s) 137, 335, 618, 1035, 1458
GlaI GCGC 5 cut(s) 187, 268, 692, 819, 1542
GluI GCNGC 4 cut(s) 150, 1209, 1758, 1959
GsuI CTGGAG 2 cut(s) 211, 599
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 4 cut(s) 402, 1033, 1394, 1855
HapII CCGG 6 cut(s) 258, 719, 1398, 1838, 1925, 1968
HgaI GACGC 1 cut(s) 196
HhaI GCGC 5 cut(s) 188, 269, 693, 820, 1543
Hin1I GRCGYC 1 cut(s) 1623
Hin6I GCGC 5 cut(s) 186, 267, 691, 818, 1541
HinP1I GCGC 5 cut(s) 186, 267, 691, 818, 1541
HindIII AAGCTT 1 cut(s) 1094
HpaII CCGG 6 cut(s) 258, 719, 1398, 1838, 1925, 1968
HphI GGTGA 6 cut(s) 91, 169, 211, 268, 1127, 1264
Hpy166II GTNNAC 7 cut(s) 412, 772, 1123, 1255, 1297, 1525, 1627
Hpy188I TCNGA 3 cut(s) 678, 1621, 1951
Hpy188III TCNNGA 3 cut(s) 228, 1838, 1968
Hpy8I GTNNAC 7 cut(s) 412, 772, 1123, 1255, 1297, 1525, 1627
Hpy99I CGWCG 3 cut(s) 212, 332, 1072
HpyAV CCTTC 8 cut(s) 35, 115, 244, 248, 566, 940, 1733, 1866
HpyCH4III ACNGT 5 cut(s) 422, 493, 1244, 1555, 1631
HpyCH4IV ACGT 3 cut(s) 426, 516, 1623
HpyCH4V TGCA 7 cut(s) 77, 308, 772, 891, 1211, 1646, 2006
HpyF10VI GCNNNNNNNGC 3 cut(s) 390, 399, 1921
HpyF3I CTNAG 7 cut(s) 535, 632, 1235, 1321, 1611, 1954, 1989
HpySE526I ACGT 3 cut(s) 426, 516, 1623
Hsp92I GRCGYC 1 cut(s) 1623
HspAI GCGC 5 cut(s) 186, 267, 691, 818, 1541
Kpn2I TCCGGA 2 cut(s) 1837, 1967
Ksp22I TGATCA 1 cut(s) 1678
Kzo9I GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
LmnI GCTCC 1 cut(s) 204
Lsp1109I GCAGC 4 cut(s) 136, 1195, 1769, 1945
LweI GCATC 4 cut(s) 136, 878, 900, 2015
MaeI CTAG 5 cut(s) 137, 335, 618, 1035, 1458
MaeII ACGT 3 cut(s) 426, 516, 1623
MaeIII GTNAC 3 cut(s) 217, 422, 1437
MalI GATC 7 cut(s) 513, 675, 779, 1183, 1223, 1680, 1751
MboI GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
MfeI CAATTG 1 cut(s) 1898
MflI RGATCY 1 cut(s) 1181
MhlI GDGCHC 2 cut(s) 774, 1834
MlyI GAGTC 5 cut(s) 225, 311, 992, 1946, 2000
MmeI TCCRAC 5 cut(s) 196, 850, 1335, 1452, 1929
Mph1103I ATGCAT 1 cut(s) 893
MroI TCCGGA 2 cut(s) 1837, 1967
MroXI GAANNNNTTC 1 cut(s) 555
MseI TTAA 7 cut(s) 369, 699, 795, 930, 1080, 1164, 1593
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 2 cut(s) 1760, 1958
MspI CCGG 6 cut(s) 258, 719, 1398, 1838, 1925, 1968
MspR9I CCNGG 2 cut(s) 578, 1399
MunI CAATTG 1 cut(s) 1898
MvaI CCWGG 1 cut(s) 578
MvnI CGCG 1 cut(s) 1490
MwoI GCNNNNNNNGC 3 cut(s) 390, 399, 1921
NciI CCSGG 1 cut(s) 1399
NcoI CCATGG 1 cut(s) 1528
NdeI CATATG 1 cut(s) 1153
NdeII GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
NheI GCTAGC 1 cut(s) 334
NlaIV GGNNCC 8 cut(s) 22, 361, 501, 1241, 1271, 1564, 1929, 1966
NmeAIII GCCGAG 2 cut(s) 360, 378
NmuCI GTSAC 1 cut(s) 217
NsiI ATGCAT 1 cut(s) 893
NspI RCATGY 1 cut(s) 850
NspV TTCGAA 3 cut(s) 1017, 1478, 1689
OliI CACNNNNGTG 1 cut(s) 480
PceI AGGCCT 1 cut(s) 1855
PciI ACATGT 1 cut(s) 846
PcsI WCGNNNNNNNCGW 2 cut(s) 405, 522
PdmI GAANNNNTTC 1 cut(s) 555
PfeI GAWTC 5 cut(s) 614, 1325, 1475, 1616, 1873
PfoI TCCNGGA 1 cut(s) 576
PkrI GCNGC 4 cut(s) 151, 1210, 1759, 1960
PleI GAGTC 5 cut(s) 224, 310, 992, 1946, 1999
PmaCI CACGTG 1 cut(s) 517
PmlI CACGTG 1 cut(s) 517
PpsI GAGTC 5 cut(s) 224, 310, 992, 1946, 1999
Ppu21I YACGTR 1 cut(s) 517
PpuMI RGGWCCY 2 cut(s) 360, 499
PscI ACATGT 1 cut(s) 846
Psp5II RGGWCCY 2 cut(s) 360, 499
Psp6I CCWGG 1 cut(s) 576
PspCI CACGTG 1 cut(s) 517
PspGI CCWGG 1 cut(s) 576
PspN4I GGNNCC 8 cut(s) 22, 361, 501, 1241, 1271, 1564, 1929, 1966
PspPI GGNCC 4 cut(s) 360, 499, 1031, 1525
PspPPI RGGWCCY 2 cut(s) 360, 499
PstI CTGCAG 1 cut(s) 1213
PstNI CAGNNNCTG 1 cut(s) 1961
PsuI RGATCY 1 cut(s) 1181
PvuII CAGCTG 2 cut(s) 1760, 1958
RsaI GTAC 7 cut(s) 112, 323, 757, 810, 1298, 1881, 2002
RsaNI GTAC 7 cut(s) 111, 322, 756, 809, 1297, 1880, 2001
RseI CAYNNNNRTG 1 cut(s) 480
SaqAI TTAA 7 cut(s) 369, 699, 795, 930, 1080, 1164, 1593
SatI GCNGC 4 cut(s) 150, 1209, 1758, 1959
Sau3AI GATC 7 cut(s) 511, 673, 777, 1181, 1221, 1678, 1749
Sau96I GGNCC 4 cut(s) 360, 499, 1031, 1525
ScaI AGTACT 3 cut(s) 112, 810, 1881
SchI GAGTC 5 cut(s) 225, 311, 992, 1946, 2000
ScrFI CCNGG 2 cut(s) 578, 1399
SduI GDGCHC 2 cut(s) 774, 1834
SfaNI GCATC 4 cut(s) 136, 878, 900, 2015
SfcI CTRYAG 2 cut(s) 1209, 1627
SfuI TTCGAA 3 cut(s) 1017, 1478, 1689
SinI GGWCC 3 cut(s) 360, 499, 1525
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 1 cut(s) 1383
SmoI CTYRAG 1 cut(s) 1383
SseBI AGGCCT 1 cut(s) 1855
SsiI CCGC 4 cut(s) 658, 744, 866, 1913
SspI AATATT 1 cut(s) 160
SspMI CTAG 5 cut(s) 137, 335, 618, 1035, 1458
StuI AGGCCT 1 cut(s) 1855
StyD4I CCNGG 2 cut(s) 576, 1397
StyI CCWWGG 3 cut(s) 560, 1034, 1528
TaaI ACNGT 5 cut(s) 422, 493, 1244, 1555, 1631
TaiI ACGT 3 cut(s) 429, 519, 1626
TaqII GACCGA 1 cut(s) 200
TatI WGTACW 3 cut(s) 110, 808, 1879
TfiI GAWTC 5 cut(s) 614, 1325, 1475, 1616, 1873
Tru1I TTAA 7 cut(s) 369, 699, 795, 930, 1080, 1164, 1593
Tru9I TTAA 7 cut(s) 369, 699, 795, 930, 1080, 1164, 1593
TseFI GTSAC 1 cut(s) 217
TseI GCWGC 4 cut(s) 149, 1208, 1757, 1958
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 5 cut(s) 1035, 1123, 1290, 1294, 1431
VneI GTGCAC 1 cut(s) 770
VpaK11BI GGWCC 3 cut(s) 360, 499, 1525
XapI RAATTY 9 cut(s) 45, 283, 461, 684, 932, 1480, 1934, 1971, 2020
XceI RCATGY 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 1573
XmaJI CCTAGG 1 cut(s) 1034
XmiI GTMKAC 2 cut(s) 411, 1626
XmnI GAANNNNTTC 1 cut(s) 555
XspI CTAG 5 cut(s) 137, 335, 618, 1035, 1458
ZraI GACGTC 1 cut(s) 1624
ZrmI AGTACT 3 cut(s) 112, 810, 1881
Zsp2I ATGCAT 1 cut(s) 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.