Rmu_sc0006798.1_g000003

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006798.1
Physical Location & Seq
Reverse (-)
19815 .. 21772
1958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006798.1_g000003.1.cds

Sequence Viewer

Length: 1872 bp
atgttgtctgaaagcacaagtagcagtactcaaacaatttgcttcctaattattttcatcaatttcttctctcactttgctcatccactctccttcagtataaatcagtttgacgctagtacagaaggaattgtctatgaaggtgatgctcgcccttcatcgggagtgcttgacatcaacacaggcaattctgtcggtgttggacatgctacgtatgcagagcctttgcacctatgggacactgctactaggtcactggcagacttcactgctcatttcactttcgtggtcgactatggtcctactcatgatggggacttcagcgatggaattgcctttttccttgctcctgttggctaccatattccaatcaactttcgcgaagctgaactgggattattcaactacaccaccaaaaataatgccttgtccaaaaaccagattgtagccgtagagttcgacacctggggaaacggtggtttagatacagccgggccgcatattgggatcgacatcaatgaaatatcttcggttgtgtacgccaattggaataccagtaacatcctcgggaagcttggcaatactgcttcttctcttacttaccatgttgacttgcgaaatattctccccgaaagggttacaatcggtttttctgcttcaactggaatgtacactactcggcatgttttatgttcatgggcgtttaattcgactttggtggataacaatattagaagagctgaaaagaagaaaaagaaatttttgatactagtcattgcagtccctggcttcattttgacgcttggtgtagtcatatgttggatggtggtattaaggaagcggagaaacaattactccgccgaagtctctgatcttgagaagctagcctttccaaaacgatttgcttaccaagaattgtttactgccaccaacggggttgcaaacgatagaaggctaggcaaaggtgggtctggccaagtttataaaggactcatacaagaccttggaggctgcatagttgccgtgaagagaatctttgcagaacctgatcagcattatgagagagtcttcatcaatgaagtcaaaatcataagccgcttaatccatcgaaacctagtgcagttcattgggtggtgtcatgaacaaggagaaggcttacttgtttatgcatatatgcctaacaacagccttgacacccatctatttggcactagaacaaccctgcaatggcaaaacaggtacaacatagctttggggttggcctcagccattcactatctacatgaagatgcagagcagtgtgtacttcatagggatatcaaatcagctaacgtactgttggatgatgacttcagcactaagcttggtgattttggtattgctaagcttatggatccccgcttgaggtctcagacaagaggggtggtagggacttttggatacatggctccggaatatgctattgaagggagggctcgtaaggaatctgacatgtatagttttggagttgtagccttggaaattgcctatggaaggaagacttaccaagacgatgaacatcacgtgccactctttaggtgggtttggcagttgttccttgcaggaaatattcttgatgcagctgatgaaaaattaggaatgaattatgatcgaaatgaaatgaaatgcttgttgattgttggactatggtgtactcgccccaataacaaggaaagacccacagcaggacaggtgatgaaggttattcagcatgaagcaccattgccggaacttccacatgacatgcataatgatccagaactgcctcaacctcaataccaatctcaaattgcatcttctcagatatcctcaacttcttctagctatatatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

623

Amino Acids

69.79

Weight (kDa)

6.12

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 984
AccI GTMKAC 1 cut(s) 291
AccII CGCG 1 cut(s) 381
AccIII TCCGGA 1 cut(s) 1450
AciI CCGC 5 cut(s) 497, 841, 858, 1096, 1399
AclWI GGATC 4 cut(s) 515, 1388, 1401, 1787
AcoI YGGCCR 1 cut(s) 973
AcsI RAATTY 1 cut(s) 758
AcuI CTGAAG 3 cut(s) 79, 304, 1336
AcvI CACGTG 1 cut(s) 1564
AfaI GTAC 8 cut(s) 28, 121, 539, 671, 1241, 1305, 1335, 1693
AfiI CCNNNNNNNGG 9 cut(s) 160, 161, 503, 634, 933, 1227, 1404, 1533, 1724
AflIII ACRYGT 1 cut(s) 1491
AgsI TTSAA 3 cut(s) 403, 660, 1466
AhlI ACTAGT 1 cut(s) 769
AjnI CCWGG 2 cut(s) 464, 784
AleI CACNNNNGTG 1 cut(s) 284
Alw26I GTCTC 2 cut(s) 871, 1413
AlwI GGATC 4 cut(s) 515, 1388, 1401, 1787
AlwNI CAGNNNCTG 2 cut(s) 785, 1046
Ama87I CYCGRG 1 cut(s) 566
Aor13HI TCCGGA 1 cut(s) 1450
AoxI GGCC 3 cut(s) 494, 973, 1260
ApeKI GCWGC 2 cut(s) 1011, 1619
ApoI RAATTY 1 cut(s) 758
AspS9I GGNCC 2 cut(s) 299, 494
AsuC2I CCSGG 1 cut(s) 493
AsuHPI GGTGA 3 cut(s) 155, 1379, 1744
AsuNHI GCTAGC 1 cut(s) 883
AvaI CYCGRG 1 cut(s) 566
AvaII GGWCC 1 cut(s) 299
BalI TGGCCA 1 cut(s) 975
BamHI GGATCC 1 cut(s) 1393
BanII GRGCYC 1 cut(s) 1477
BbrPI CACGTG 1 cut(s) 1564
BbsI GAAGAC 2 cut(s) 1060, 1544
BbvCI CCTCAGC 1 cut(s) 1264
BbvI GCAGC 2 cut(s) 998, 1631
BccI CCATC 5 cut(s) 305, 320, 817, 1113, 1206
BceAI ACGGC 2 cut(s) 434, 1007
BcgI CGANNNNNNTGC 4 cut(s) 175, 209, 314, 348
BciT130I CCWGG 2 cut(s) 466, 786
BciVI GTATCC 1 cut(s) 1433
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 1 cut(s) 493
BcoDI GTCTC 2 cut(s) 871, 1413
BcuI ACTAGT 1 cut(s) 769
BfaI CTAG 8 cut(s) 117, 249, 770, 884, 956, 1115, 1212, 1860
BfuI GTATCC 1 cut(s) 1433
BisI GCNGC 4 cut(s) 497, 1012, 1096, 1620
BlpI GCTNAGC 1 cut(s) 1383
BlsI GCNGC 4 cut(s) 498, 1013, 1097, 1621
BmcAI AGTACT 1 cut(s) 28
Bme1390I CCNGG 3 cut(s) 466, 493, 786
Bme18I GGWCC 1 cut(s) 299
BmeT110I CYCGRG 1 cut(s) 566
BmgT120I GGNCC 2 cut(s) 299, 494
BmiI GGNNCC 2 cut(s) 1395, 1449
BmrFI CCNGG 3 cut(s) 466, 493, 786
BmrI ACTGGG 1 cut(s) 401
BmsI GCATC 4 cut(s) 136, 1279, 1606, 1841
BmtI GCTAGC 1 cut(s) 887
BmuI ACTGGG 1 cut(s) 401
BoxI GACNNNNGTC 1 cut(s) 297
BpiI GAAGAC 2 cut(s) 1060, 1544
Bpu10I CCTNAGC 1 cut(s) 1264
Bpu1102I GCTNAGC 1 cut(s) 1383
BpuEI CTTGAG 2 cut(s) 896, 1423
BpuMI CCSGG 1 cut(s) 493
BsaAI YACGTR 2 cut(s) 213, 1564
BsaBI GATNNNNATC 2 cut(s) 512, 1557
BsaI GGTCTC 1 cut(s) 1413
BsaJI CCNNGG 5 cut(s) 465, 565, 784, 1003, 1515
BsaWI WCCGGW 1 cut(s) 1450
BsaXI ACNNNNNCTCC 4 cut(s) 839, 869, 1462, 1492
Bsc4I CCNNNNNNNGG 9 cut(s) 160, 161, 503, 634, 933, 1227, 1404, 1533, 1724
Bse1I ACTGG 4 cut(s) 261, 396, 555, 667
Bse3DI GCAATG 3 cut(s) 774, 1232, 1760
Bse8I GATNNNNATC 2 cut(s) 512, 1557
BseAI TCCGGA 1 cut(s) 1450
BseBI CCWGG 2 cut(s) 466, 786
BseDI CCNNGG 5 cut(s) 465, 565, 784, 1003, 1515
BseGI GGATG 4 cut(s) 82, 561, 828, 1348
BseJI GATNNNNATC 2 cut(s) 512, 1557
BseLI CCNNNNNNNGG 9 cut(s) 160, 161, 503, 634, 933, 1227, 1404, 1533, 1724
BseMI GCAATG 3 cut(s) 774, 1232, 1760
BseMII CTCAG 3 cut(s) 1278, 1424, 1853
BseNI ACTGG 4 cut(s) 261, 396, 555, 667
BseXI GCAGC 2 cut(s) 998, 1631
BsgI GTGCAG 1 cut(s) 1139
Bsh1236I CGCG 1 cut(s) 381
BshFI GGCC 3 cut(s) 496, 975, 1262
BsiHKCI CYCGRG 1 cut(s) 566
BsiSI CCGG 3 cut(s) 492, 1451, 1766
BslFI GGGAC 4 cut(s) 251, 329, 767, 1444
BslI CCNNNNNNNGG 9 cut(s) 160, 161, 503, 634, 933, 1227, 1404, 1533, 1724
BsmAI GTCTC 2 cut(s) 871, 1413
BsmFI GGGAC 4 cut(s) 251, 329, 767, 1444
BsnI GGCC 3 cut(s) 496, 975, 1262
Bso31I GGTCTC 1 cut(s) 1413
BsoBI CYCGRG 1 cut(s) 566
Bsp1286I GDGCHC 1 cut(s) 1477
Bsp13I TCCGGA 1 cut(s) 1450
Bsp1407I TGTACA 1 cut(s) 669
Bsp143I GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
Bsp1720I GCTNAGC 1 cut(s) 1383
Bsp68I TCGCGA 1 cut(s) 381
BspACI CCGC 5 cut(s) 497, 841, 858, 1096, 1399
BspANI GGCC 3 cut(s) 496, 975, 1262
BspCNI CTCAG 3 cut(s) 1277, 1423, 1852
BspEI TCCGGA 1 cut(s) 1450
BspFNI CGCG 1 cut(s) 381
BspHI TCATGA 2 cut(s) 307, 1138
BspLI GGNNCC 2 cut(s) 1395, 1449
BspOI GCTAGC 1 cut(s) 887
BspPI GGATC 4 cut(s) 515, 1388, 1401, 1787
BspQI GCTCTTC 1 cut(s) 730
BspTNI GGTCTC 1 cut(s) 1413
BsrDI GCAATG 3 cut(s) 774, 1232, 1760
BsrGI TGTACA 1 cut(s) 669
BsrI ACTGG 4 cut(s) 261, 396, 555, 667
BssECI CCNNGG 5 cut(s) 465, 565, 784, 1003, 1515
BssMI GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
BssT1I CCWWGG 2 cut(s) 1003, 1515
Bst2UI CCWGG 2 cut(s) 466, 786
Bst4CI ACNGT 2 cut(s) 476, 1338
Bst6I CTCTTC 2 cut(s) 730, 1022
BstAUI TGTACA 1 cut(s) 669
BstBAI YACGTR 2 cut(s) 213, 1564
BstC8I GCNNGC 2 cut(s) 151, 885
BstDEI CTNAG 5 cut(s) 1264, 1359, 1383, 1410, 1839
BstENI CCTNNNNNAGG 1 cut(s) 1531
BstF5I GGATG 4 cut(s) 82, 561, 828, 1348
BstFNI CGCG 1 cut(s) 381
BstKTI GATC 6 cut(s) 510, 874, 1051, 1396, 1651, 1795
BstMAI GTCTC 2 cut(s) 871, 1413
BstMBI GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
BstMWI GCNNNNNNNGC 2 cut(s) 21, 215
BstNI CCWGG 2 cut(s) 466, 786
BstNSI RCATGY 4 cut(s) 209, 686, 1495, 1786
BstPAI GACNNNNGTC 1 cut(s) 297
BstSCI CCNGG 3 cut(s) 464, 491, 784
BstSNI TACGTA 1 cut(s) 213
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 2 cut(s) 998, 1631
BstV2I GAAGAC 2 cut(s) 1060, 1544
BstX2I RGATCY 1 cut(s) 1393
BstXI CCANNNNNNTGG 1 cut(s) 1205
BstYI RGATCY 1 cut(s) 1393
BsuI GTATCC 1 cut(s) 1433
BsuRI GGCC 3 cut(s) 496, 975, 1262
BtgZI GCGATG 1 cut(s) 339
BtsCI GGATG 4 cut(s) 82, 561, 828, 1348
BtsI GCAGTG 3 cut(s) 240, 267, 1304
BtsIMutI CAGTG 4 cut(s) 240, 254, 267, 1304
BtuMI TCGCGA 1 cut(s) 381
Cac8I GCNNGC 2 cut(s) 151, 885
CaiI CAGNNNCTG 2 cut(s) 785, 1046
CciI TCATGA 2 cut(s) 307, 1138
Cfr13I GGNCC 2 cut(s) 299, 494
CseI GACGC 2 cut(s) 122, 808
Csp6I GTAC 8 cut(s) 27, 120, 538, 670, 1240, 1304, 1334, 1692
CspCI CAANNNNNGTGG 2 cut(s) 1404, 1439
CviQI GTAC 8 cut(s) 27, 120, 538, 670, 1240, 1304, 1334, 1692
DdeI CTNAG 5 cut(s) 1264, 1359, 1383, 1410, 1839
DpnI GATC 6 cut(s) 509, 873, 1050, 1395, 1650, 1794
DpnII GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
EaeI YGGCCR 1 cut(s) 973
Eam1104I CTCTTC 2 cut(s) 730, 1022
EarI CTCTTC 2 cut(s) 730, 1022
EciI GGCGGA 1 cut(s) 847
Eco105I TACGTA 1 cut(s) 213
Eco130I CCWWGG 2 cut(s) 1003, 1515
Eco24I GRGCYC 1 cut(s) 1477
Eco31I GGTCTC 1 cut(s) 1413
Eco32I GATATC 2 cut(s) 1318, 1845
Eco47I GGWCC 1 cut(s) 299
Eco57I CTGAAG 3 cut(s) 79, 304, 1336
Eco72I CACGTG 1 cut(s) 1564
Eco88I CYCGRG 1 cut(s) 566
EcoNI CCTNNNNNAGG 1 cut(s) 1531
EcoRII CCWGG 2 cut(s) 464, 784
EcoRV GATATC 2 cut(s) 1318, 1845
EcoT14I CCWWGG 2 cut(s) 1003, 1515
EcoT22I ATGCAT 2 cut(s) 1171, 1788
EcoT38I GRGCYC 1 cut(s) 1477
ErhI CCWWGG 2 cut(s) 1003, 1515
FalI AAGNNNNNCTT 8 cut(s) 872, 904, 1019, 1051, 1143, 1175, 1525, 1557
FaqI GGGAC 4 cut(s) 251, 329, 767, 1444
FauI CCCGC 1 cut(s) 1406
FauNDI CATATG 1 cut(s) 815
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 1 cut(s) 291
Fnu4HI GCNGC 4 cut(s) 497, 1012, 1096, 1620
FokI GGATG 4 cut(s) 69, 548, 835, 1355
FriOI GRGCYC 1 cut(s) 1477
Fsp4HI GCNGC 4 cut(s) 497, 1012, 1096, 1620
FspBI CTAG 8 cut(s) 117, 249, 770, 884, 956, 1115, 1212, 1860
GluI GCNGC 4 cut(s) 497, 1012, 1096, 1620
HaeIII GGCC 3 cut(s) 496, 975, 1262
HapII CCGG 3 cut(s) 492, 1451, 1766
HgaI GACGC 2 cut(s) 122, 808
HincII GTYRAC 2 cut(s) 292, 610
HindII GTYRAC 2 cut(s) 292, 610
HindIII AAGCTT 3 cut(s) 572, 1361, 1385
HinfI GANTC 4 cut(s) 990, 1032, 1065, 1484
HpaII CCGG 3 cut(s) 492, 1451, 1766
HphI GGTGA 3 cut(s) 155, 1379, 1744
Hpy166II GTNNAC 7 cut(s) 292, 538, 610, 672, 921, 1304, 1692
Hpy188I TCNGA 5 cut(s) 10, 871, 1413, 1489, 1842
Hpy188III TCNNGA 9 cut(s) 162, 308, 380, 568, 875, 1139, 1451, 1613, 1796
Hpy8I GTNNAC 7 cut(s) 292, 538, 610, 672, 921, 1304, 1692
HpyAV CCTTC 9 cut(s) 103, 119, 134, 165, 945, 1145, 1460, 1527, 1732
HpyCH4III ACNGT 2 cut(s) 476, 1338
HpyCH4IV ACGT 3 cut(s) 212, 1332, 1563
HpyF10VI GCNNNNNNNGC 2 cut(s) 21, 215
HpyF3I CTNAG 5 cut(s) 1264, 1359, 1383, 1410, 1839
HpySE526I ACGT 3 cut(s) 212, 1332, 1563
Kpn2I TCCGGA 1 cut(s) 1450
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
LguI GCTCTTC 1 cut(s) 730
LmnI GCTCC 2 cut(s) 352, 1453
Lsp1109I GCAGC 2 cut(s) 998, 1631
LweI GCATC 4 cut(s) 136, 1279, 1606, 1841
MaeI CTAG 8 cut(s) 117, 249, 770, 884, 956, 1115, 1212, 1860
MaeII ACGT 3 cut(s) 212, 1332, 1563
MaeIII GTNAC 3 cut(s) 252, 557, 637
MalI GATC 6 cut(s) 509, 873, 1050, 1395, 1650, 1794
MboI GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 1 cut(s) 1393
MhlI GDGCHC 1 cut(s) 1477
MlsI TGGCCA 1 cut(s) 975
MluNI TGGCCA 1 cut(s) 975
MlyI GAGTC 2 cut(s) 984, 1074
MmeI TCCRAC 4 cut(s) 181, 800, 1320, 1660
MnlI CCTC 9 cut(s) 575, 1001, 1273, 1398, 1412, 1464, 1815, 1821, 1858
Mox20I TGGCCA 1 cut(s) 975
Mph1103I ATGCAT 2 cut(s) 1171, 1788
MroI TCCGGA 1 cut(s) 1450
MscI TGGCCA 1 cut(s) 975
MseI TTAA 3 cut(s) 705, 833, 1100
MslI CAYNNNNRTG 2 cut(s) 284, 1287
Msp20I TGGCCA 1 cut(s) 975
MspA1I CMGCKG 1 cut(s) 1622
MspI CCGG 3 cut(s) 492, 1451, 1766
MspR9I CCNGG 3 cut(s) 466, 493, 786
MunI CAATTG 1 cut(s) 544
MvaI CCWGG 2 cut(s) 466, 786
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 2 cut(s) 21, 215
NciI CCSGG 1 cut(s) 493
NdeI CATATG 1 cut(s) 815
NdeII GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
NheI GCTAGC 1 cut(s) 883
NlaIV GGNNCC 2 cut(s) 1395, 1449
NmeAIII GCCGAG 1 cut(s) 658
NmuCI GTSAC 1 cut(s) 252
NruI TCGCGA 1 cut(s) 381
NsiI ATGCAT 2 cut(s) 1171, 1788
NspI RCATGY 4 cut(s) 209, 686, 1495, 1786
OliI CACNNNNGTG 1 cut(s) 284
PagI TCATGA 2 cut(s) 307, 1138
PciI ACATGT 1 cut(s) 1491
PciSI GCTCTTC 1 cut(s) 730
PfeI GAWTC 2 cut(s) 1032, 1484
PkrI GCNGC 4 cut(s) 498, 1013, 1097, 1621
PleI GAGTC 2 cut(s) 984, 1073
PmaCI CACGTG 1 cut(s) 1564
PmlI CACGTG 1 cut(s) 1564
PpsI GAGTC 2 cut(s) 984, 1073
Ppu21I YACGTR 2 cut(s) 213, 1564
PscI ACATGT 1 cut(s) 1491
PshAI GACNNNNGTC 1 cut(s) 297
PsiI TTATAA 1 cut(s) 984
Psp6I CCWGG 2 cut(s) 464, 784
PspCI CACGTG 1 cut(s) 1564
PspGI CCWGG 2 cut(s) 464, 784
PspN4I GGNNCC 2 cut(s) 1395, 1449
PspPI GGNCC 2 cut(s) 299, 494
PstNI CAGNNNCTG 2 cut(s) 785, 1046
PsuI RGATCY 1 cut(s) 1393
PvuII CAGCTG 1 cut(s) 1622
RruI TCGCGA 1 cut(s) 381
RsaI GTAC 8 cut(s) 28, 121, 539, 671, 1241, 1305, 1335, 1693
RsaNI GTAC 8 cut(s) 27, 120, 538, 670, 1240, 1304, 1334, 1692
RseI CAYNNNNRTG 2 cut(s) 284, 1287
SalI GTCGAC 1 cut(s) 290
SapI GCTCTTC 1 cut(s) 730
SaqAI TTAA 3 cut(s) 705, 833, 1100
SatI GCNGC 4 cut(s) 497, 1012, 1096, 1620
Sau3AI GATC 6 cut(s) 507, 871, 1048, 1393, 1648, 1792
Sau96I GGNCC 2 cut(s) 299, 494
ScaI AGTACT 1 cut(s) 28
SchI GAGTC 2 cut(s) 984, 1074
ScrFI CCNGG 3 cut(s) 466, 493, 786
SduI GDGCHC 1 cut(s) 1477
SfaNI GCATC 4 cut(s) 136, 1279, 1606, 1841
SinI GGWCC 1 cut(s) 299
SmiMI CAYNNNNRTG 2 cut(s) 284, 1287
SmlI CTYRAG 2 cut(s) 875, 1402
SmoI CTYRAG 2 cut(s) 875, 1402
SnaBI TACGTA 1 cut(s) 213
SpeI ACTAGT 1 cut(s) 769
SsiI CCGC 5 cut(s) 497, 841, 858, 1096, 1399
SspI AATATT 3 cut(s) 622, 730, 1609
SspMI CTAG 8 cut(s) 117, 249, 770, 884, 956, 1115, 1212, 1860
StyD4I CCNGG 3 cut(s) 464, 491, 784
StyI CCWWGG 2 cut(s) 1003, 1515
TaaI ACNGT 2 cut(s) 476, 1338
TaiI ACGT 3 cut(s) 215, 1335, 1566
TaqI TCGA 6 cut(s) 291, 459, 510, 710, 1108, 1651
TatI WGTACW 5 cut(s) 26, 119, 669, 1303, 1691
TauI GCSGC 2 cut(s) 499, 1098
TfiI GAWTC 2 cut(s) 1032, 1484
Tru1I TTAA 3 cut(s) 705, 833, 1100
Tru9I TTAA 3 cut(s) 705, 833, 1100
TscAI CASTG 4 cut(s) 247, 261, 274, 1304
TseFI GTSAC 1 cut(s) 252
TseI GCWGC 2 cut(s) 1011, 1619
Tsp45I GTSAC 1 cut(s) 252
TspRI CASTG 4 cut(s) 247, 261, 274, 1304
VpaK11BI GGWCC 1 cut(s) 299
XagI CCTNNNNNAGG 1 cut(s) 1531
XapI RAATTY 1 cut(s) 758
XceI RCATGY 4 cut(s) 209, 686, 1495, 1786
XcmI CCANNNNNNNNNTGG 1 cut(s) 1575
XmiI GTMKAC 1 cut(s) 291
XspI CTAG 8 cut(s) 117, 249, 770, 884, 956, 1115, 1212, 1860
ZrmI AGTACT 1 cut(s) 28
Zsp2I ATGCAT 2 cut(s) 1171, 1788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.