Rorug05G0323000

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
38651492 .. 38774365
122874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0323000.1

Sequence Viewer

Length: 1959 bp
ATGCTTTTCCCGTTTCCACACCAAGCACGAGTGAACTTGCTAGAGAAGAGGGTGCATGCTTGCGTGTTTATACAATTTGTTCAATCTGGAACCATGTCTATCCCACAAGCAGAACATGTAGCACCTACTGGAATTCAATTAACCACGGCTCGTGACAATTCAGTAACTGGGATAGATAACCAATCTACAAAATTCACTGCCATCGACATTTTGGCTGATGCGGCTCAACCAAACAGACCTTCACCTCATCTACTAGAACATAAAAATAGAGAAAAATACCTCAAGACATGTGTTGCCCTCTATAAGCATGCACTAAAGGGCGACTGGGAAGCCGCTGAACAAATCTTGAAAGAGGATAGGTCACTTCTGAGTGCTAGCATAACAAGATCAGGATGTGAAACAGTTCTTCACGTTGCAGCAGGATCAAGACATATCCACTTTGTGCAGAAACTGGTCAACATGATGGACAAAGAACACTTGGTACTGCAAGACATAAATGGAAACACTGCCTTGTGCGTTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATAGACCATAATAATTCTTTGCTGACAATTCGAGGTGGTAAAGATATGGCACCACCCTACATGGCTGCTGTATTAGGACAGTCGGAAATGGCATGTTACCTGTACAACAAAAGTGAAAAGATGTTGGAGATAACCGACCGAGAAAACTTGTTTTTTTCTTCCATTAACAACGGTCTGTACGATTTGGCCTTTCAGTTGCTAGTTGCTGATAAAGCATTAGCGAAGGCACGTACTAGTTCGCAGAAAAATAAAACGGCCTTGCATATCTTGGCTCGAAGACCTTCAGCATTTGGTGGCAGCCAAAGTCCACGAATGTGGACTAGACTCATTAAGTCATTACTCCCAGGTTTGAAGTTTGCATGCAAAACAAAGTTGAAAGAAGCTAATGGAGCCCTTCAACTAGTCTGCCGCCTCTGGGAAGAAATCTTGAGAGACGAGCACGATAACGTGATGAGGCTGATCAAATTTCCAACAAACTTGCTATTTGACGCAGCAGAATTAGGGAATTATGAGTTCCTAGCGGCACTTATGAGCTCTTATCCTGAGTTAGTTTGGGAAACTGATGAAAATAATCGAACTATAATCCATGTCGCAGTTTTGCATCGTCACGCAGGTATCTTCAATCTAGTGCATGAGATAGGCTCAATCAAGGATGTCATAGTGACTTATGAGGATGATCAGGGTAATAATATAGTGCATATGGCTGCAAAAGCAGCACCTCAAAACCAACTGAATCTAGTGTCGGGCGTAGCTCTTCAAATGCAGCGAGAGTTAGTATGGTTTGAGGAAGTAAAGAAGATTGTGCAACCTCAATATATAGAGATGGAAAACAAGAAAGGGAAAACACCTCAGGAAATATTCACTAAAGAGCATAGGACGTTAATGCATCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCTTGCTTGTTGCAACTATTATTGCAACTGTTGTATTTTCAGCTGCATTTAGTATACCAGGTGGCACAGATGATCATACTGGAAAGCCAAACTTTTTAAAAGAAAAAGCGTTTTTATACTTTACCATAGCCGACGGAGTGGCACTTTTTTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTTACCTCACGGTATGCAGAAAATGATTTCCTCATGTCCTTGCCCTTGAAGTTGATGGTTGGACTCACTTGCCTCTTCATCTCAATAGCATCTATGATGATGGCTTTTAGCACTGCCTTCTATTTGTCTTGTCAATATGGATCAAGATGGGTTCCAGATCTTACATTTTCTTTTGCAATTGTCCCTGTTGCTTTATATGCATTTCTGCAATTCCCTCTTGTGTCTGATATGTCGTCTTCAACATTTTGTTCAAGTCTTTTATTTCAGCCATGGAAACGTATAATATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

652

Amino Acids

73.03

Weight (kDa)

7.63

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 104 - 190 3.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 136 - 223 1.2e-09 Ankyrin repeats (3 copies)
PGG PF13962 485 - 598 5.9e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1160
AccB1I GGYRCC 1 cut(s) 607
AccI GTMKAC 1 cut(s) 1537
AciI CCGC 6 cut(s) 221, 333, 522, 527, 967, 1079
AclWI GGATC 3 cut(s) 430, 541, 1816
AcsI RAATTY 3 cut(s) 132, 191, 1022
AcuI CTGAAG 1 cut(s) 825
AdeI CACNNNGTG 1 cut(s) 442
AfaI GTAC 4 cut(s) 483, 662, 737, 790
AfiI CCNNNNNNNGG 1 cut(s) 973
AflIII ACRYGT 2 cut(s) 115, 287
AhlI ACTAGT 2 cut(s) 791, 958
AjnI CCWGG 2 cut(s) 901, 1540
AjuI GAANNNNNNNTTGG 2 cut(s) 223, 255
AleI CACNNNNGTG 1 cut(s) 871
AluBI AGCT 4 cut(s) 941, 1092, 1310, 1526
AluI AGCT 4 cut(s) 941, 1092, 1310, 1526
Alw21I GWGCWC 2 cut(s) 999, 1094
Alw26I GTCTC 1 cut(s) 984
AlwI GGATC 3 cut(s) 430, 541, 1816
AlwNI CAGNNNCTG 2 cut(s) 167, 451
AoxI GGCC 2 cut(s) 744, 813
ApeKI GCWGC 9 cut(s) 416, 524, 623, 855, 1049, 1262, 1271, 1321, 1526
ApoI RAATTY 3 cut(s) 132, 191, 1022
Asp700I GAANNNNTTC 2 cut(s) 402, 838
AsuHPI GGTGA 1 cut(s) 234
AsuNHI GCTAGC 1 cut(s) 374
AxyI CCTNAGG 1 cut(s) 1407
BaeI ACNNNNGTAYC 2 cut(s) 1156, 1189
BanI GGYRCC 1 cut(s) 607
BanII GRGCYC 2 cut(s) 952, 1094
BauI CACGAG 2 cut(s) 27, 150
BbsI GAAGAC 2 cut(s) 841, 1896
Bbv12I GWGCWC 2 cut(s) 999, 1094
BbvI GCAGC 9 cut(s) 428, 511, 610, 867, 1061, 1249, 1283, 1333, 1513
BccI CCATC 6 cut(s) 209, 457, 1375, 1717, 1762, 1809
BceAI ACGGC 2 cut(s) 162, 828
BciT130I CCWGG 2 cut(s) 903, 1542
BclI TGATCA 3 cut(s) 1017, 1234, 1555
BcoDI GTCTC 1 cut(s) 984
BcuI ACTAGT 2 cut(s) 791, 958
BfuAI ACCTGC 1 cut(s) 1160
BglI GCCNNNNNGGC 1 cut(s) 527
BglII AGATCT 1 cut(s) 1825
Bme1390I CCNGG 2 cut(s) 903, 1542
BmiI GGNNCC 4 cut(s) 91, 609, 949, 1821
BmrFI CCNGG 2 cut(s) 903, 1542
BmrI ACTGGG 2 cut(s) 177, 334
BmsI GCATC 4 cut(s) 208, 1168, 1453, 1766
BmtI GCTAGC 1 cut(s) 378
BmuI ACTGGG 2 cut(s) 177, 334
BpiI GAAGAC 2 cut(s) 841, 1896
BplI GAGNNNNNCTC 2 cut(s) 1184, 1216
BpuEI CTTGAG 2 cut(s) 266, 1006
BsaAI YACGTR 1 cut(s) 788
BsaJI CCNNGG 3 cut(s) 144, 901, 1937
Bsc4I CCNNNNNNNGG 1 cut(s) 973
Bse1I ACTGG 5 cut(s) 133, 172, 329, 456, 1567
Bse21I CCTNAGG 1 cut(s) 1407
Bse3DI GCAATG 1 cut(s) 1653
BseBI CCWGG 2 cut(s) 903, 1542
BseDI CCNNGG 3 cut(s) 144, 901, 1937
BseGI GGATG 5 cut(s) 398, 1216, 1237, 1467, 1665
BseLI CCNNNNNNNGG 1 cut(s) 973
BseMI GCAATG 1 cut(s) 1653
BseMII CTCAG 3 cut(s) 359, 1092, 1421
BseNI ACTGG 5 cut(s) 133, 172, 329, 456, 1567
BseXI GCAGC 9 cut(s) 428, 511, 610, 867, 1061, 1249, 1283, 1333, 1513
BsgI GTGCAG 1 cut(s) 464
Bsh1285I CGRYCG 1 cut(s) 697
BshFI GGCC 2 cut(s) 746, 815
BshNI GGYRCC 1 cut(s) 607
BsiEI CGRYCG 1 cut(s) 697
BsiHKAI GWGCWC 2 cut(s) 999, 1094
BslFI GGGAC 1 cut(s) 1835
BslI CCNNNNNNNGG 1 cut(s) 973
BsmAI GTCTC 1 cut(s) 984
BsmBI CGTCTC 1 cut(s) 984
BsmFI GGGAC 1 cut(s) 1835
BsnI GGCC 2 cut(s) 746, 815
Bsp1286I GDGCHC 3 cut(s) 952, 999, 1094
Bsp1407I TGTACA 1 cut(s) 660
Bsp143I GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
Bsp19I CCATGG 1 cut(s) 1937
BspACI CCGC 6 cut(s) 221, 333, 522, 527, 967, 1079
BspANI GGCC 2 cut(s) 746, 815
BspCNI CTCAG 3 cut(s) 360, 1093, 1420
BspLI GGNNCC 4 cut(s) 91, 609, 949, 1821
BspMI ACCTGC 1 cut(s) 1160
BspOI GCTAGC 1 cut(s) 378
BspPI GGATC 3 cut(s) 430, 541, 1816
BspQI GCTCTTC 1 cut(s) 1317
BspT107I GGYRCC 1 cut(s) 607
BsrDI GCAATG 1 cut(s) 1653
BsrGI TGTACA 1 cut(s) 660
BsrI ACTGG 5 cut(s) 133, 172, 329, 456, 1567
BssECI CCNNGG 3 cut(s) 144, 901, 1937
BssMI GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
BssNAI GTATAC 1 cut(s) 1538
BssSI CACGAG 2 cut(s) 27, 150
BssT1I CCWWGG 1 cut(s) 1937
Bst1107I GTATAC 1 cut(s) 1538
Bst2BI CACGAG 2 cut(s) 27, 150
Bst2UI CCWGG 2 cut(s) 903, 1542
Bst4CI ACNGT 5 cut(s) 403, 639, 731, 1513, 1680
Bst6I CTCTTC 4 cut(s) 41, 1317, 1642, 1748
BstAUI TGTACA 1 cut(s) 660
BstBAI YACGTR 1 cut(s) 788
BstC8I GCNNGC 6 cut(s) 57, 61, 309, 376, 919, 1487
BstDEI CTNAG 3 cut(s) 368, 1101, 1407
BstDSI CCRYGG 2 cut(s) 144, 1937
BstF5I GGATG 5 cut(s) 398, 1216, 1237, 1467, 1665
BstKTI GATC 8 cut(s) 389, 425, 536, 1020, 1237, 1558, 1811, 1828
BstMAI GTCTC 1 cut(s) 984
BstMBI GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
BstMCI CGRYCG 1 cut(s) 697
BstMWI GCNNNNNNNGC 7 cut(s) 221, 527, 770, 947, 1268, 1271, 1865
BstNI CCWGG 2 cut(s) 903, 1542
BstNSI RCATGY 6 cut(s) 59, 119, 291, 311, 654, 921
BstSCI CCNGG 2 cut(s) 901, 1540
BstV1I GCAGC 9 cut(s) 428, 511, 610, 867, 1061, 1249, 1283, 1333, 1513
BstV2I GAAGAC 2 cut(s) 841, 1896
BstX2I RGATCY 2 cut(s) 533, 1825
BstXI CCANNNNNNTGG 1 cut(s) 873
BstYI RGATCY 2 cut(s) 533, 1825
BstZ17I GTATAC 1 cut(s) 1538
Bsu36I CCTNAGG 1 cut(s) 1407
BsuRI GGCC 2 cut(s) 746, 815
BtgI CCRYGG 2 cut(s) 144, 1937
BtsCI GGATG 5 cut(s) 398, 1216, 1237, 1467, 1665
BtsI GCAGTG 4 cut(s) 195, 504, 1470, 1779
BtsIMutI CAGTG 4 cut(s) 195, 504, 1470, 1779
BveI ACCTGC 1 cut(s) 1160
Cac8I GCNNGC 6 cut(s) 57, 61, 309, 376, 919, 1487
CaiI CAGNNNCTG 2 cut(s) 167, 451
CseI GACGC 1 cut(s) 1055
CsiI ACCWGGT 1 cut(s) 1540
Csp6I GTAC 4 cut(s) 482, 661, 736, 789
CviQI GTAC 4 cut(s) 482, 661, 736, 789
DdeI CTNAG 3 cut(s) 368, 1101, 1407
DpnI GATC 8 cut(s) 388, 424, 535, 1019, 1236, 1557, 1810, 1827
DpnII GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
DraI TTTAAA 1 cut(s) 1581
DraIII CACNNNGTG 1 cut(s) 442
Eam1104I CTCTTC 4 cut(s) 41, 1317, 1642, 1748
EarI CTCTTC 4 cut(s) 41, 1317, 1642, 1748
Ecl136II GAGCTC 1 cut(s) 1092
Eco130I CCWWGG 1 cut(s) 1937
Eco24I GRGCYC 2 cut(s) 952, 1094
Eco53kI GAGCTC 1 cut(s) 1092
Eco57I CTGAAG 1 cut(s) 825
Eco81I CCTNAGG 1 cut(s) 1407
EcoICRI GAGCTC 1 cut(s) 1092
EcoRI GAATTC 1 cut(s) 132
EcoRII CCWGG 2 cut(s) 901, 1540
EcoT14I CCWWGG 1 cut(s) 1937
EcoT22I ATGCAT 2 cut(s) 1446, 1870
EcoT38I GRGCYC 2 cut(s) 952, 1094
ErhI CCWWGG 1 cut(s) 1937
Esp3I CGTCTC 1 cut(s) 984
FalI AAGNNNNNCTT 2 cut(s) 1559, 1591
FaqI GGGAC 1 cut(s) 1835
FauNDI CATATG 1 cut(s) 1257
FbaI TGATCA 3 cut(s) 1017, 1234, 1555
FblI GTMKAC 1 cut(s) 1537
FokI GGATG 5 cut(s) 405, 1223, 1244, 1474, 1652
FriOI GRGCYC 2 cut(s) 952, 1094
HaeIII GGCC 2 cut(s) 746, 815
HgaI GACGC 1 cut(s) 1055
HincII GTYRAC 1 cut(s) 457
HindII GTYRAC 1 cut(s) 457
HinfI GANTC 3 cut(s) 882, 1291, 1731
HphI GGTGA 1 cut(s) 234
Hpy166II GTNNAC 5 cut(s) 34, 457, 866, 876, 1538
Hpy188I TCNGA 3 cut(s) 369, 643, 1894
Hpy8I GTNNAC 5 cut(s) 34, 457, 866, 876, 1538
Hpy99I CGWCG 1 cut(s) 1619
HpyAV CCTTC 6 cut(s) 249, 775, 849, 962, 1459, 1795
HpyCH4III ACNGT 5 cut(s) 403, 639, 731, 1513, 1680
HpyCH4IV ACGT 5 cut(s) 411, 787, 1005, 1436, 1945
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 527, 770, 947, 1268, 1271, 1865
HpyF3I CTNAG 3 cut(s) 368, 1101, 1407
HpySE526I ACGT 5 cut(s) 411, 787, 1005, 1436, 1945
Ksp22I TGATCA 3 cut(s) 1017, 1234, 1555
Kzo9I GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
LguI GCTCTTC 1 cut(s) 1317
LmnI GCTCC 1 cut(s) 947
Lsp1109I GCAGC 9 cut(s) 428, 511, 610, 867, 1061, 1249, 1283, 1333, 1513
LweI GCATC 4 cut(s) 208, 1168, 1453, 1766
MabI ACCWGGT 1 cut(s) 1540
MaeII ACGT 5 cut(s) 411, 787, 1005, 1436, 1945
MaeIII GTNAC 6 cut(s) 152, 163, 360, 653, 1163, 1219
MalI GATC 8 cut(s) 388, 424, 535, 1019, 1236, 1557, 1810, 1827
MboI GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
MfeI CAATTG 1 cut(s) 1845
MflI RGATCY 2 cut(s) 533, 1825
MhlI GDGCHC 3 cut(s) 952, 999, 1094
MlyI GAGTC 2 cut(s) 876, 1725
MmeI TCCRAC 4 cut(s) 621, 663, 1052, 1708
Mph1103I ATGCAT 2 cut(s) 1446, 1870
MroXI GAANNNNTTC 2 cut(s) 402, 838
MseI TTAA 5 cut(s) 140, 723, 888, 1439, 1580
MslI CAYNNNNRTG 1 cut(s) 871
MspA1I CMGCKG 3 cut(s) 335, 524, 1526
MspR9I CCNGG 2 cut(s) 903, 1542
MunI CAATTG 1 cut(s) 1845
MvaI CCWGG 2 cut(s) 903, 1542
MwoI GCNNNNNNNGC 7 cut(s) 221, 527, 770, 947, 1268, 1271, 1865
NcoI CCATGG 1 cut(s) 1937
NdeI CATATG 1 cut(s) 1257
NdeII GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
NheI GCTAGC 1 cut(s) 374
NlaIV GGNNCC 4 cut(s) 91, 609, 949, 1821
NmuCI GTSAC 4 cut(s) 152, 360, 1163, 1219
NsiI ATGCAT 2 cut(s) 1446, 1870
NspI RCATGY 6 cut(s) 59, 119, 291, 311, 654, 921
OliI CACNNNNGTG 1 cut(s) 871
PaeI GCATGC 3 cut(s) 59, 311, 921
PciI ACATGT 2 cut(s) 115, 287
PciSI GCTCTTC 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 1 cut(s) 735
PdmI GAANNNNTTC 2 cut(s) 402, 838
PfeI GAWTC 1 cut(s) 1291
PflFI GACNNNGTC 1 cut(s) 545
PleI GAGTC 2 cut(s) 876, 1725
PpsI GAGTC 2 cut(s) 876, 1725
Ppu21I YACGTR 1 cut(s) 788
PscI ACATGT 2 cut(s) 115, 287
Psp124BI GAGCTC 1 cut(s) 1094
Psp6I CCWGG 2 cut(s) 901, 1540
PspGI CCWGG 2 cut(s) 901, 1540
PspN4I GGNNCC 4 cut(s) 91, 609, 949, 1821
PsrI GAACNNNNNNTAC 2 cut(s) 465, 497
PstNI CAGNNNCTG 2 cut(s) 167, 451
PsuI RGATCY 2 cut(s) 533, 1825
PsyI GACNNNGTC 1 cut(s) 545
PvuII CAGCTG 1 cut(s) 1526
RsaI GTAC 4 cut(s) 483, 662, 737, 790
RsaNI GTAC 4 cut(s) 482, 661, 736, 789
RseI CAYNNNNRTG 1 cut(s) 871
SacI GAGCTC 1 cut(s) 1094
SapI GCTCTTC 1 cut(s) 1317
SaqAI TTAA 5 cut(s) 140, 723, 888, 1439, 1580
Sau3AI GATC 8 cut(s) 386, 422, 533, 1017, 1234, 1555, 1808, 1825
SchI GAGTC 2 cut(s) 876, 1725
ScrFI CCNGG 2 cut(s) 903, 1542
SduI GDGCHC 3 cut(s) 952, 999, 1094
SexAI ACCWGGT 1 cut(s) 1540
SfaNI GCATC 4 cut(s) 208, 1168, 1453, 1766
SmiMI CAYNNNNRTG 1 cut(s) 871
SmlI CTYRAG 2 cut(s) 281, 985
SmoI CTYRAG 2 cut(s) 281, 985
SpeI ACTAGT 2 cut(s) 791, 958
SphI GCATGC 3 cut(s) 59, 311, 921
SsiI CCGC 6 cut(s) 221, 333, 522, 527, 967, 1079
SspI AATATT 1 cut(s) 1416
SstI GAGCTC 1 cut(s) 1094
StyD4I CCNGG 2 cut(s) 901, 1540
StyI CCWWGG 1 cut(s) 1937
TaaI ACNGT 5 cut(s) 403, 639, 731, 1513, 1680
TaiI ACGT 5 cut(s) 414, 790, 1008, 1439, 1948
TaqI TCGA 4 cut(s) 204, 589, 832, 1132
TaqII GACCGA 1 cut(s) 711
TatI WGTACW 1 cut(s) 660
TauI GCSGC 6 cut(s) 224, 335, 524, 530, 969, 1082
TfiI GAWTC 1 cut(s) 1291
Tru1I TTAA 5 cut(s) 140, 723, 888, 1439, 1580
Tru9I TTAA 5 cut(s) 140, 723, 888, 1439, 1580
TscAI CASTG 4 cut(s) 202, 511, 1477, 1786
TseFI GTSAC 4 cut(s) 152, 360, 1163, 1219
TseI GCWGC 9 cut(s) 416, 524, 623, 855, 1049, 1262, 1271, 1321, 1526
Tsp45I GTSAC 4 cut(s) 152, 360, 1163, 1219
TspDTI ATGAA 5 cut(s) 1137, 1470, 1478, 1654, 1735
TspGWI ACGGA 1 cut(s) 1632
TspRI CASTG 4 cut(s) 202, 511, 1477, 1786
Tth111I GACNNNGTC 1 cut(s) 545
XapI RAATTY 3 cut(s) 132, 191, 1022
XbaI TCTAGA 1 cut(s) 538
XceI RCATGY 6 cut(s) 59, 119, 291, 311, 654, 921
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 1537
XmnI GAANNNNTTC 2 cut(s) 402, 838
Zsp2I ATGCAT 2 cut(s) 1446, 1870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.