RLG00000028041

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
17997853 .. 18000208
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028041

Sequence Viewer

Length: 1932 bp
ATGGTATTGACTTCAAGTTTGCTATTGAATTGGCGTCTTGGAAAGTCCACAGGAATTGAAGCAGCAGTACGCAAGCAATCTGCTTCTTTCGACCAGAGTGCAAATGGAGTTGTCTTTGAAGGTGCTGCCCAGTTTTCATCGGGAAGGATTGAGCTCAACAGAGGCAGTTATTTCGATACTGGACGTGCTATTTATGCAGAGCCTTTGCATCTATGGGACAATGTTACTAGGTCGCTGGCAGACTTCACTACTCATTTCACTTTCATGGTCGACCTTGGTTCTGATCCTAACGATAGGAGCGCCACCGATGGAATTGCCTTTTTCCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGTGCTTATCGTCTGGGATTATTCAACTCCACCAACGATTTTAATGCCTCGTCCAACCAGATTGTAGCCGTAGAGTTCGACACCCTTGGAAACGGTGATTGGGATACCGCCCAGCCGCATATTGGGATAGACATCAATAAAATCTCTTCGGTTACGTCCGCCAAATGGAATACCAGTAACATCATCGGGAAGACAGGTAATGCAAGGATAATTTACAACGCTACTACCAAGGACCTTTCTGTGTTTTGGACATTCGAGGAAAACACAAACCCCGTTTTTCCAGGCAATACTACTTCTTCCCTTACTCACCATGTTGACTTGCGAGAGATTCTCCCCGAAAGGGTTACAATCGGTTTTTCTGCTTCATCTGGATTAAACCCTGGTCAATATTCTTTATATTCATGGGCGTTTAATTCGACTTTGGTGGATAGTGATACTAGAAGAACCGACAGCAAGGAAAAGAAGAGAAAGATATTCTTGATACTGGTCATTGCAGTTCCTGGTTTCACTTTGACGATTAGTTCAGTCATATGTTGGTTGATGGTATTAAGGAATCGGAGAAACAATTACTCCACTGAAGTCTCTGATCTTGAGTGGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACTAACGGGTTTTCAGACGCTAGAAGGCTAGGCCAAGGAGGCTCGGGACAAGTATATAAAGGACTCCTACAAGACCTTGGAGGCTGCACTGTTGCCGTGAAGAGAATCTTTGCAAGATCTGATCAGCAAGATGAGAAAGTCTTCATCAATGAAGTCAAAATCATCAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTCGACAAGCATCTATTTGGCAACAGAACAACCCTGCAATGGGACAACAGGTACAAGATATCATTGGCCTTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTACTTCATAGGGATATCAAACCAGCTAACGTACTGTTGGATGATGACTTCAACACTAAGCTTGGTGATTTTGGTATCGCTAAGCTCGTGGATCCCCGCTTGAGGTCTCAAACAACAAAGTTGGTAGGGACTTTTGGATACATGGCCCCGGAATATGCTACTGAAGGGAGGGCTAGTAAGGAATCTGACATGTATAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAAGACTTACCAAGATGGTAAAGATCACGTGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGGAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCATGTTGATTGTTGGACTATGGTGTACTCACTCCAATTACAAGGAAAGACCCAAAGCAGGACAGGTGATGGAGGTTCTTCAGCGTAAAGCACCATTGCCGGAACTTTCATATGACATGCATGGTGATCCAGAACTGCCTCAACCTCAATACCATTCTCAGATGTCCTCAACTTCTTCTAGCTATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

644

Amino Acids

72.08

Weight (kDa)

6.23

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 269 4.9e-59 Legume lectin domain
Pkinase PF00069 339 - 604 5.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 342 - 545 3.5e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 270
AciI CCGC 5 cut(s) 468, 476, 519, 1171, 1474
AclWI GGATC 4 cut(s) 278, 1463, 1476, 1862
AcuI CTGAAG 3 cut(s) 957, 1560, 1805
AcvI CACGTG 1 cut(s) 1639
AcyI GRCGYC 1 cut(s) 34
AfaI GTAC 5 cut(s) 69, 1316, 1380, 1410, 1768
AfiI CCNNNNNNNGG 9 cut(s) 359, 482, 525, 700, 1008, 1302, 1303, 1479, 1799
AflIII ACRYGT 1 cut(s) 1566
AgsI TTSAA 6 cut(s) 15, 28, 59, 119, 385, 1429
AjiI CACGTC 1 cut(s) 185
AjnI CCWGG 4 cut(s) 640, 739, 859, 1188
AjuI GAANNNNNNNTTGG 2 cut(s) 442, 474
AluBI AGCT 6 cut(s) 154, 1403, 1438, 1462, 1697, 1923
AluI AGCT 6 cut(s) 154, 1403, 1438, 1462, 1697, 1923
Alw21I GWGCWC 1 cut(s) 156
Alw26I GTCTC 2 cut(s) 946, 1488
AlwI GGATC 4 cut(s) 278, 1463, 1476, 1862
AlwNI CAGNNNCTG 1 cut(s) 860
Ama87I CYCGRG 1 cut(s) 1045
AoxI GGCC 4 cut(s) 1033, 1329, 1335, 1521
ApeKI GCWGC 5 cut(s) 62, 125, 998, 1086, 1694
ArsI GACNNNNNNTTYG 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 1142
AspLEI GCGC 1 cut(s) 302
AspS9I GGNCC 2 cut(s) 592, 1522
AsuC2I CCSGG 1 cut(s) 1526
AsuHPI GGTGA 5 cut(s) 467, 659, 1454, 1819, 1877
AsuNHI GCTAGC 1 cut(s) 958
AvaI CYCGRG 1 cut(s) 1045
AvaII GGWCC 1 cut(s) 592
BamHI GGATCC 1 cut(s) 1468
BanII GRGCYC 1 cut(s) 156
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BauI CACGAG 1 cut(s) 1463
BbrPI CACGTG 1 cut(s) 1639
BbsI GAAGAC 3 cut(s) 557, 1135, 1619
Bbv12I GWGCWC 1 cut(s) 156
BbvCI CCTCAGC 1 cut(s) 1339
BbvI GCAGC 5 cut(s) 74, 112, 985, 1073, 1706
BccI CCATC 5 cut(s) 302, 895, 1188, 1619, 1804
BceAI ACGGC 2 cut(s) 413, 1082
BcgI CGANNNNNNTGC 8 cut(s) 80, 114, 154, 188, 296, 330, 386, 420
BciT130I CCWGG 4 cut(s) 642, 741, 861, 1190
BciVI GTATCC 2 cut(s) 457, 1508
BclI TGATCA 1 cut(s) 1123
BcnI CCSGG 1 cut(s) 1526
BcoDI GTCTC 2 cut(s) 946, 1488
BfaI CTAG 7 cut(s) 228, 798, 959, 1023, 1031, 1551, 1920
BfoI RGCGCY 1 cut(s) 303
BfuI GTATCC 2 cut(s) 457, 1508
BglI GCCNNNNNGGC 1 cut(s) 1041
BglII AGATCT 1 cut(s) 1118
BisI GCNGC 7 cut(s) 63, 126, 476, 999, 1087, 1171, 1695
BlpI GCTNAGC 1 cut(s) 1458
BlsI GCNGC 7 cut(s) 64, 127, 477, 1000, 1088, 1172, 1696
Bme1390I CCNGG 5 cut(s) 642, 741, 861, 1190, 1526
Bme18I GGWCC 1 cut(s) 592
BmeT110I CYCGRG 1 cut(s) 1045
BmgBI CACGTC 1 cut(s) 185
BmgT120I GGNCC 2 cut(s) 592, 1522
BmiI GGNNCC 2 cut(s) 1470, 1524
BmrFI CCNGG 5 cut(s) 642, 741, 861, 1190, 1526
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 3 cut(s) 217, 1282, 1354
BmtI GCTAGC 1 cut(s) 962
BmuI ACTGGG 1 cut(s) 124
BpiI GAAGAC 3 cut(s) 557, 1135, 1619
BplI GAGNNNNNCTC 2 cut(s) 675, 707
Bpu10I CCTNAGC 1 cut(s) 1339
Bpu1102I GCTNAGC 1 cut(s) 1458
BpuEI CTTGAG 2 cut(s) 971, 1498
BpuMI CCSGG 1 cut(s) 1526
BsaAI YACGTR 1 cut(s) 1639
BsaBI GATNNNNATC 1 cut(s) 491
BsaHI GRCGYC 1 cut(s) 34
BsaI GGTCTC 1 cut(s) 1488
BsaXI ACNNNNNCTCC 4 cut(s) 914, 944, 1537, 1567
Bsc4I CCNNNNNNNGG 9 cut(s) 359, 482, 525, 700, 1008, 1302, 1303, 1479, 1799
Bse1I ACTGG 4 cut(s) 130, 184, 534, 849
Bse3DI GCAATG 3 cut(s) 849, 1307, 1835
Bse8I GATNNNNATC 1 cut(s) 491
BseBI CCWGG 4 cut(s) 642, 741, 861, 1190
BseGI GGATG 1 cut(s) 1423
BseJI GATNNNNATC 1 cut(s) 491
BseLI CCNNNNNNNGG 9 cut(s) 359, 482, 525, 700, 1008, 1302, 1303, 1479, 1799
BseMI GCAATG 3 cut(s) 849, 1307, 1835
BseMII CTCAG 2 cut(s) 1353, 1913
BseNI ACTGG 4 cut(s) 130, 184, 534, 849
BseXI GCAGC 5 cut(s) 74, 112, 985, 1073, 1706
BseYI CCCAGC 1 cut(s) 471
BsgI GTGCAG 2 cut(s) 1072, 1214
BshFI GGCC 4 cut(s) 1035, 1331, 1337, 1523
BsiHKAI GWGCWC 1 cut(s) 156
BsiHKCI CYCGRG 1 cut(s) 1045
BsiSI CCGG 2 cut(s) 1526, 1841
BslFI GGGAC 4 cut(s) 230, 1062, 1319, 1519
BslI CCNNNNNNNGG 9 cut(s) 359, 482, 525, 700, 1008, 1302, 1303, 1479, 1799
BsmAI GTCTC 2 cut(s) 946, 1488
BsmFI GGGAC 4 cut(s) 230, 1062, 1319, 1519
BsmI GAATGC 1 cut(s) 1232
BsnI GGCC 4 cut(s) 1035, 1331, 1337, 1523
Bso31I GGTCTC 1 cut(s) 1488
BsoBI CYCGRG 1 cut(s) 1045
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
Bsp1720I GCTNAGC 1 cut(s) 1458
BspACI CCGC 5 cut(s) 468, 476, 519, 1171, 1474
BspANI GGCC 4 cut(s) 1035, 1331, 1337, 1523
BspCNI CTCAG 2 cut(s) 1352, 1912
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 2 cut(s) 1470, 1524
BspOI GCTAGC 1 cut(s) 962
BspPI GGATC 4 cut(s) 278, 1463, 1476, 1862
BspTNI GGTCTC 1 cut(s) 1488
BsrDI GCAATG 3 cut(s) 849, 1307, 1835
BsrI ACTGG 4 cut(s) 130, 184, 534, 849
BssMI GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
BssNI GRCGYC 1 cut(s) 34
BssSI CACGAG 1 cut(s) 1463
BssT1I CCWWGG 8 cut(s) 274, 445, 588, 1036, 1078, 1332, 1590, 1672
Bst2BI CACGAG 1 cut(s) 1463
Bst2UI CCWGG 4 cut(s) 642, 741, 861, 1190
Bst4CI ACNGT 4 cut(s) 344, 455, 1093, 1413
Bst6I CTCTTC 3 cut(s) 511, 818, 1097
BstACI GRCGYC 1 cut(s) 34
BstBAI YACGTR 1 cut(s) 1639
BstC8I GCNNGC 3 cut(s) 74, 237, 960
BstDEI CTNAG 4 cut(s) 1339, 1434, 1458, 1899
BstF5I GGATG 1 cut(s) 1423
BstH2I RGCGCY 1 cut(s) 303
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 8 cut(s) 286, 949, 1121, 1126, 1471, 1636, 1726, 1870
BstMAI GTCTC 2 cut(s) 946, 1488
BstMBI GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
BstMWI GCNNNNNNNGC 2 cut(s) 194, 1041
BstNI CCWGG 4 cut(s) 642, 741, 861, 1190
BstNSI RCATGY 3 cut(s) 1570, 1747, 1861
BstSCI CCNGG 5 cut(s) 640, 739, 859, 1188, 1524
BstV1I GCAGC 5 cut(s) 74, 112, 985, 1073, 1706
BstV2I GAAGAC 3 cut(s) 557, 1135, 1619
BstX2I RGATCY 2 cut(s) 1118, 1468
BstYI RGATCY 2 cut(s) 1118, 1468
BsuI GTATCC 2 cut(s) 457, 1508
BsuRI GGCC 4 cut(s) 1035, 1331, 1337, 1523
BtrI CACGTC 1 cut(s) 185
BtsCI GGATG 1 cut(s) 1423
BtsI GCAGTG 1 cut(s) 1379
BtsIMutI CAGTG 3 cut(s) 933, 1089, 1379
Cac8I GCNNGC 3 cut(s) 74, 237, 960
CaiI CAGNNNCTG 1 cut(s) 860
CciI TCATGA 1 cut(s) 1213
CfoI GCGC 1 cut(s) 302
Cfr13I GGNCC 2 cut(s) 592, 1522
CseI GACGC 3 cut(s) 23, 1028, 1700
CsiI ACCWGGT 1 cut(s) 1188
Csp6I GTAC 5 cut(s) 68, 1315, 1379, 1409, 1767
CspCI CAANNNNNGTGG 2 cut(s) 37, 72
CviQI GTAC 5 cut(s) 68, 1315, 1379, 1409, 1767
DdeI CTNAG 4 cut(s) 1339, 1434, 1458, 1899
DpnI GATC 8 cut(s) 285, 948, 1120, 1125, 1470, 1635, 1725, 1869
DpnII GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
Eam1104I CTCTTC 3 cut(s) 511, 818, 1097
EarI CTCTTC 3 cut(s) 511, 818, 1097
EciI GGCGGA 1 cut(s) 508
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 8 cut(s) 274, 445, 588, 1036, 1078, 1332, 1590, 1672
Eco24I GRGCYC 1 cut(s) 156
Eco31I GGTCTC 1 cut(s) 1488
Eco32I GATATC 2 cut(s) 1323, 1393
Eco47I GGWCC 1 cut(s) 592
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 3 cut(s) 957, 1560, 1805
Eco72I CACGTG 1 cut(s) 1639
Eco88I CYCGRG 1 cut(s) 1045
EcoICRI GAGCTC 1 cut(s) 154
EcoO109I RGGNCCY 1 cut(s) 592
EcoRII CCWGG 4 cut(s) 640, 739, 859, 1188
EcoRV GATATC 2 cut(s) 1323, 1393
EcoT14I CCWWGG 8 cut(s) 274, 445, 588, 1036, 1078, 1332, 1590, 1672
EcoT22I ATGCAT 3 cut(s) 1246, 1745, 1863
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 8 cut(s) 274, 445, 588, 1036, 1078, 1332, 1590, 1672
FalI AAGNNNNNCTT 6 cut(s) 821, 853, 1094, 1126, 1600, 1632
FaqI GGGAC 4 cut(s) 230, 1062, 1319, 1519
FauI CCCGC 1 cut(s) 1481
FauNDI CATATG 2 cut(s) 890, 1852
FbaI TGATCA 1 cut(s) 1123
FblI GTMKAC 1 cut(s) 270
Fnu4HI GCNGC 7 cut(s) 63, 126, 476, 999, 1087, 1171, 1695
FokI GGATG 1 cut(s) 1430
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 7 cut(s) 63, 126, 476, 999, 1087, 1171, 1695
FspBI CTAG 7 cut(s) 228, 798, 959, 1023, 1031, 1551, 1920
GlaI GCGC 1 cut(s) 301
GluI GCNGC 7 cut(s) 63, 126, 476, 999, 1087, 1171, 1695
GsaI CCCAGC 1 cut(s) 475
HaeII RGCGCY 1 cut(s) 303
HaeIII GGCC 4 cut(s) 1035, 1331, 1337, 1523
HapII CCGG 2 cut(s) 1526, 1841
HgaI GACGC 3 cut(s) 23, 1028, 1700
HhaI GCGC 1 cut(s) 302
Hin1I GRCGYC 1 cut(s) 34
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HincII GTYRAC 2 cut(s) 271, 676
HindII GTYRAC 2 cut(s) 271, 676
HindIII AAGCTT 1 cut(s) 1436
HinfI GANTC 5 cut(s) 688, 913, 1065, 1107, 1559
HpaII CCGG 2 cut(s) 1526, 1841
HphI GGTGA 5 cut(s) 467, 659, 1454, 1819, 1877
Hpy166II GTNNAC 5 cut(s) 48, 271, 676, 1379, 1767
Hpy188I TCNGA 7 cut(s) 283, 918, 946, 1018, 1123, 1564, 1902
Hpy188III TCNNGA 9 cut(s) 141, 547, 729, 838, 950, 1047, 1214, 1688, 1871
Hpy8I GTNNAC 5 cut(s) 48, 271, 676, 1379, 1767
HpyAV CCTTC 6 cut(s) 113, 138, 1020, 1355, 1535, 1602
HpyCH4III ACNGT 4 cut(s) 344, 455, 1093, 1413
HpyCH4IV ACGT 4 cut(s) 184, 515, 1407, 1638
HpyF10VI GCNNNNNNNGC 2 cut(s) 194, 1041
HpyF3I CTNAG 4 cut(s) 1339, 1434, 1458, 1899
HpySE526I ACGT 4 cut(s) 184, 515, 1407, 1638
Hsp92I GRCGYC 1 cut(s) 34
HspAI GCGC 1 cut(s) 300
Ksp22I TGATCA 1 cut(s) 1123
Kzo9I GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
LmnI GCTCC 2 cut(s) 297, 334
Lsp1109I GCAGC 5 cut(s) 74, 112, 985, 1073, 1706
LweI GCATC 3 cut(s) 217, 1282, 1354
MabI ACCWGGT 1 cut(s) 1188
MaeI CTAG 7 cut(s) 228, 798, 959, 1023, 1031, 1551, 1920
MaeII ACGT 4 cut(s) 184, 515, 1407, 1638
MaeIII GTNAC 4 cut(s) 223, 511, 536, 703
MalI GATC 8 cut(s) 285, 948, 1120, 1125, 1470, 1635, 1725, 1869
MboI GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
MflI RGATCY 2 cut(s) 1118, 1468
MhlI GDGCHC 1 cut(s) 156
MlyI GAGTC 1 cut(s) 1059
MmeI TCCRAC 3 cut(s) 438, 1395, 1735
Mph1103I ATGCAT 3 cut(s) 1246, 1745, 1863
MroXI GAANNNNTTC 1 cut(s) 1142
MseI TTAA 5 cut(s) 402, 734, 771, 908, 1175
MslI CAYNNNNRTG 2 cut(s) 263, 1362
MspA1I CMGCKG 1 cut(s) 1697
MspI CCGG 2 cut(s) 1526, 1841
MspR9I CCNGG 5 cut(s) 642, 741, 861, 1190, 1526
Mva1269I GAATGC 1 cut(s) 1232
MvaI CCWGG 4 cut(s) 642, 741, 861, 1190
MwoI GCNNNNNNNGC 2 cut(s) 194, 1041
NciI CCSGG 1 cut(s) 1526
NdeI CATATG 2 cut(s) 890, 1852
NdeII GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
NheI GCTAGC 1 cut(s) 958
NlaIV GGNNCC 2 cut(s) 1470, 1524
NsiI ATGCAT 3 cut(s) 1246, 1745, 1863
NspI RCATGY 3 cut(s) 1570, 1747, 1861
PagI TCATGA 1 cut(s) 1213
PciI ACATGT 1 cut(s) 1566
PcsI WCGNNNNNNNCGW 1 cut(s) 1461
PctI GAATGC 1 cut(s) 1232
PdmI GAANNNNTTC 1 cut(s) 1142
PfeI GAWTC 4 cut(s) 688, 913, 1107, 1559
PkrI GCNGC 7 cut(s) 64, 127, 477, 1000, 1088, 1172, 1696
PleI GAGTC 1 cut(s) 1059
PmaCI CACGTG 1 cut(s) 1639
PmlI CACGTG 1 cut(s) 1639
PpsI GAGTC 1 cut(s) 1059
Ppu21I YACGTR 1 cut(s) 1639
PpuMI RGGWCCY 1 cut(s) 592
PscI ACATGT 1 cut(s) 1566
Psp124BI GAGCTC 1 cut(s) 156
Psp5II RGGWCCY 1 cut(s) 592
Psp6I CCWGG 4 cut(s) 640, 739, 859, 1188
PspCI CACGTG 1 cut(s) 1639
PspFI CCCAGC 1 cut(s) 471
PspGI CCWGG 4 cut(s) 640, 739, 859, 1188
PspN4I GGNNCC 2 cut(s) 1470, 1524
PspPI GGNCC 2 cut(s) 592, 1522
PspPPI RGGWCCY 1 cut(s) 592
PstNI CAGNNNCTG 1 cut(s) 860
PsuI RGATCY 2 cut(s) 1118, 1468
PvuII CAGCTG 1 cut(s) 1697
RsaI GTAC 5 cut(s) 69, 1316, 1380, 1410, 1768
RsaNI GTAC 5 cut(s) 68, 1315, 1379, 1409, 1767
RseI CAYNNNNRTG 2 cut(s) 263, 1362
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 5 cut(s) 402, 734, 771, 908, 1175
SatI GCNGC 7 cut(s) 63, 126, 476, 999, 1087, 1171, 1695
Sau3AI GATC 8 cut(s) 283, 946, 1118, 1123, 1468, 1633, 1723, 1867
Sau96I GGNCC 2 cut(s) 592, 1522
SchI GAGTC 1 cut(s) 1059
ScrFI CCNGG 5 cut(s) 642, 741, 861, 1190, 1526
SduI GDGCHC 1 cut(s) 156
SexAI ACCWGGT 1 cut(s) 1188
SfaNI GCATC 3 cut(s) 217, 1282, 1354
SinI GGWCC 1 cut(s) 592
SmiMI CAYNNNNRTG 2 cut(s) 263, 1362
SmlI CTYRAG 2 cut(s) 950, 1477
SmoI CTYRAG 2 cut(s) 950, 1477
SsiI CCGC 5 cut(s) 468, 476, 519, 1171, 1474
SspI AATATT 2 cut(s) 749, 1684
SspMI CTAG 7 cut(s) 228, 798, 959, 1023, 1031, 1551, 1920
SstI GAGCTC 1 cut(s) 156
StyD4I CCNGG 5 cut(s) 640, 739, 859, 1188, 1524
StyI CCWWGG 8 cut(s) 274, 445, 588, 1036, 1078, 1332, 1590, 1672
TaaI ACNGT 4 cut(s) 344, 455, 1093, 1413
TaiI ACGT 4 cut(s) 187, 518, 1410, 1641
TaqI TCGA 9 cut(s) 90, 174, 270, 438, 615, 776, 1183, 1266, 1726
TatI WGTACW 2 cut(s) 1378, 1766
TauI GCSGC 2 cut(s) 478, 1173
TfiI GAWTC 4 cut(s) 688, 913, 1107, 1559
Tru1I TTAA 5 cut(s) 402, 734, 771, 908, 1175
Tru9I TTAA 5 cut(s) 402, 734, 771, 908, 1175
TscAI CASTG 3 cut(s) 940, 1096, 1379
TseI GCWGC 5 cut(s) 62, 125, 998, 1086, 1694
TspRI CASTG 3 cut(s) 940, 1096, 1379
VpaK11BI GGWCC 1 cut(s) 592
XceI RCATGY 3 cut(s) 1570, 1747, 1861
XcmI CCANNNNNNNNNTGG 3 cut(s) 101, 479, 1650
XmiI GTMKAC 1 cut(s) 270
XmnI GAANNNNTTC 1 cut(s) 1142
XspI CTAG 7 cut(s) 228, 798, 959, 1023, 1031, 1551, 1920
Zsp2I ATGCAT 3 cut(s) 1246, 1745, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.