L-type lectin-domain containing receptor kinase IX.1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_1 | PF12854 | 68 - 98 | 5.8e-08 | PPR repeat |
| PPR_2 | PF13041 | 70 - 103 | 2.2e-07 | PPR repeat family |
| PPR | PF01535 | 73 - 103 | 4.3e-08 | PPR repeat |
| PPR_2 | PF13041 | 101 - 148 | 1.4e-09 | PPR repeat family |
| PPR | PF01535 | 104 - 134 | 3.9e-06 | PPR repeat |
| PPR_2 | PF13041 | 202 - 251 | 5.8e-09 | PPR repeat family |
| PPR_2 | PF13041 | 317 - 365 | 1.9e-09 | PPR repeat family |
| PPR_2 | PF13041 | 382 - 426 | 4.9e-11 | PPR repeat family |
| PPR | PF01535 | 385 - 415 | 8.4e-06 | PPR repeat |
| PPR_2 | PF13041 | 484 - 532 | 2.8e-08 | PPR repeat family |
| PPR_2 | PF13041 | 585 - 632 | 2.2e-09 | PPR repeat family |
| PPR | PF01535 | 587 - 613 | 8.1e-06 | PPR repeat |
| PPR_1 | PF12854 | 652 - 683 | 2.4e-06 | PPR repeat |
| E_motif | PF20431 | 702 - 764 | 4e-15 | E motif |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 571, 1469 |
| AccB1I | GGYRCC | 1 cut(s) | 403 |
| AccI | GTMKAC | 1 cut(s) | 937 |
| AccII | CGCG | 1 cut(s) | 662 |
| AciI | CCGC | 5 cut(s) | 69, 365, 662, 902, 2149 |
| AclWI | GGATC | 5 cut(s) | 1315, 1980, 2057, 2264, 2277 |
| AcoI | YGGCCR | 3 cut(s) | 1114, 2002, 2187 |
| AcsI | RAATTY | 3 cut(s) | 792, 1492, 1726 |
| AcuI | CTGAAG | 2 cut(s) | 294, 963 |
| AcyI | GRCGYC | 1 cut(s) | 1860 |
| AdeI | CACNNNGTG | 1 cut(s) | 187 |
| AfaI | GTAC | 6 cut(s) | 113, 152, 218, 334, 1756, 2294 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2073 |
| AgsI | TTSAA | 7 cut(s) | 643, 868, 1049, 1395, 1613, 1925, 1938 |
| AjiI | CACGTC | 1 cut(s) | 1802 |
| AjnI | CCWGG | 1 cut(s) | 2272 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 47, 79, 218, 250, 1021, 1053, 1138, 1170 |
| Alw21I | GWGCWC | 1 cut(s) | 1681 |
| Alw26I | GTCTC | 1 cut(s) | 1846 |
| AlwI | GGATC | 5 cut(s) | 1315, 1980, 2057, 2264, 2277 |
| AoxI | GGCC | 8 cut(s) | 57, 339, 502, 985, 1114, 1719, 2002, 2187 |
| ApaI | GGGCCC | 1 cut(s) | 1723 |
| ApeKI | GCWGC | 6 cut(s) | 1082, 1289, 1328, 1343, 1893, 2132 |
| ApoI | RAATTY | 3 cut(s) | 792, 1492, 1726 |
| AspLEI | GCGC | 1 cut(s) | 1376 |
| AspS9I | GGNCC | 5 cut(s) | 58, 340, 1719, 1720, 2155 |
| AsuC2I | CCSGG | 2 cut(s) | 19, 1723 |
| AsuHPI | GGTGA | 3 cut(s) | 602, 1112, 1718 |
| AvaII | GGWCC | 1 cut(s) | 2155 |
| BaeGI | GKGCMC | 2 cut(s) | 1723, 1947 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1769, 1802 |
| BalI | TGGCCA | 1 cut(s) | 2189 |
| BamHI | GGATCC | 1 cut(s) | 2269 |
| BanI | GGYRCC | 1 cut(s) | 403 |
| BanII | GRGCYC | 1 cut(s) | 1723 |
| BauI | CACGAG | 1 cut(s) | 220 |
| BbsI | GAAGAC | 1 cut(s) | 1200 |
| Bbv12I | GWGCWC | 1 cut(s) | 1681 |
| BbvCI | CCTCAGC | 1 cut(s) | 1843 |
| BbvI | GCAGC | 6 cut(s) | 1094, 1301, 1315, 1330, 1905, 2144 |
| BccI | CCATC | 6 cut(s) | 379, 625, 782, 1640, 1709, 2208 |
| BceAI | ACGGC | 4 cut(s) | 639, 1101, 1862, 1989 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1235, 1269 |
| BciT130I | CCWGG | 1 cut(s) | 2274 |
| BcnI | CCSGG | 2 cut(s) | 19, 1723 |
| BcoDI | GTCTC | 1 cut(s) | 1846 |
| BfaI | CTAG | 3 cut(s) | 933, 1284, 2039 |
| BfmI | CTRYAG | 1 cut(s) | 1011 |
| BfuAI | ACCTGC | 2 cut(s) | 571, 1469 |
| BglII | AGATCT | 2 cut(s) | 856, 2239 |
| BisI | GCNGC | 6 cut(s) | 1083, 1290, 1329, 1344, 1894, 2133 |
| BlpI | GCTNAGC | 3 cut(s) | 27, 600, 2119 |
| BlsI | GCNGC | 6 cut(s) | 1084, 1291, 1330, 1345, 1895, 2134 |
| BmcAI | AGTACT | 1 cut(s) | 334 |
| Bme1390I | CCNGG | 3 cut(s) | 19, 1723, 2274 |
| Bme18I | GGWCC | 1 cut(s) | 2155 |
| BmgBI | CACGTC | 1 cut(s) | 1802 |
| BmgT120I | GGNCC | 5 cut(s) | 58, 340, 1719, 1720, 2155 |
| BmiI | GGNNCC | 6 cut(s) | 405, 1720, 1721, 1962, 2157, 2271 |
| BmrFI | CCNGG | 3 cut(s) | 19, 1723, 2274 |
| BmrI | ACTGGG | 1 cut(s) | 987 |
| BmsI | GCATC | 4 cut(s) | 562, 1536, 1903, 2037 |
| BmuI | ACTGGG | 1 cut(s) | 987 |
| BpiI | GAAGAC | 1 cut(s) | 1200 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 137, 169 |
| BpmI | CTGGAG | 2 cut(s) | 1325, 1332 |
| Bpu10I | CCTNAGC | 2 cut(s) | 204, 1843 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 27, 600, 2119 |
| BpuEI | CTTGAG | 2 cut(s) | 527, 1482 |
| BpuMI | CCSGG | 2 cut(s) | 19, 1723 |
| BsaAI | YACGTR | 1 cut(s) | 98 |
| BsaHI | GRCGYC | 1 cut(s) | 1860 |
| BsaI | GGTCTC | 1 cut(s) | 1846 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 463, 493, 503, 533 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2073 |
| Bse1I | ACTGG | 3 cut(s) | 982, 1964, 2313 |
| Bse3DI | GCAATG | 3 cut(s) | 582, 875, 1299 |
| BseBI | CCWGG | 1 cut(s) | 2274 |
| BseGI | GGATG | 3 cut(s) | 463, 577, 2145 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2073 |
| BseMI | GCAATG | 3 cut(s) | 582, 875, 1299 |
| BseMII | CTCAG | 8 cut(s) | 288, 591, 909, 1291, 1571, 1646, 1839, 1857 |
| BseNI | ACTGG | 3 cut(s) | 982, 1964, 2313 |
| BseRI | GAGGAG | 1 cut(s) | 524 |
| BseSI | GKGCMC | 2 cut(s) | 1723, 1947 |
| BseXI | GCAGC | 6 cut(s) | 1094, 1301, 1315, 1330, 1905, 2144 |
| BseYI | CCCAGC | 1 cut(s) | 254 |
| BsgI | GTGCAG | 1 cut(s) | 1308 |
| Bsh1236I | CGCG | 1 cut(s) | 662 |
| BshFI | GGCC | 8 cut(s) | 59, 341, 504, 987, 1116, 1721, 2004, 2189 |
| BshNI | GGYRCC | 1 cut(s) | 403 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1681 |
| BsiSI | CCGG | 3 cut(s) | 19, 1723, 2284 |
| BslFI | GGGAC | 3 cut(s) | 25, 1844, 2231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2073 |
| BsmAI | GTCTC | 1 cut(s) | 1846 |
| BsmFI | GGGAC | 3 cut(s) | 25, 1844, 2231 |
| BsmI | GAATGC | 5 cut(s) | 232, 535, 1035, 1168, 2310 |
| BsnI | GGCC | 8 cut(s) | 59, 341, 504, 987, 1116, 1721, 2004, 2189 |
| Bso31I | GGTCTC | 1 cut(s) | 1846 |
| Bsp120I | GGGCCC | 1 cut(s) | 1719 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1681, 1723, 1947 |
| Bsp143I | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 27, 600, 2119 |
| BspACI | CCGC | 5 cut(s) | 69, 365, 662, 902, 2149 |
| BspANI | GGCC | 8 cut(s) | 59, 341, 504, 987, 1116, 1721, 2004, 2189 |
| BspCNI | CTCAG | 8 cut(s) | 289, 592, 910, 1290, 1572, 1645, 1840, 1856 |
| BspFNI | CGCG | 1 cut(s) | 662 |
| BspHI | TCATGA | 1 cut(s) | 969 |
| BspLI | GGNNCC | 6 cut(s) | 405, 1720, 1721, 1962, 2157, 2271 |
| BspMI | ACCTGC | 2 cut(s) | 571, 1469 |
| BspPI | GGATC | 5 cut(s) | 1315, 1980, 2057, 2264, 2277 |
| BspT107I | GGYRCC | 1 cut(s) | 403 |
| BspTNI | GGTCTC | 1 cut(s) | 1846 |
| BsrDI | GCAATG | 3 cut(s) | 582, 875, 1299 |
| BsrI | ACTGG | 3 cut(s) | 982, 1964, 2313 |
| BssMI | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| BssNAI | GTATAC | 1 cut(s) | 938 |
| BssNI | GRCGYC | 1 cut(s) | 1860 |
| BssSI | CACGAG | 1 cut(s) | 220 |
| Bst1107I | GTATAC | 1 cut(s) | 938 |
| Bst2BI | CACGAG | 1 cut(s) | 220 |
| Bst2UI | CCWGG | 1 cut(s) | 2274 |
| Bst4CI | ACNGT | 2 cut(s) | 835, 1759 |
| Bst6I | CTCTTC | 3 cut(s) | 270, 905, 1311 |
| BstACI | GRCGYC | 1 cut(s) | 1860 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 899, 1598 |
| BstBAI | YACGTR | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 5 cut(s) | 1080, 1372, 1599, 1891, 1918 |
| BstF5I | GGATG | 3 cut(s) | 463, 577, 2145 |
| BstFNI | CGCG | 1 cut(s) | 662 |
| BstHHI | GCGC | 1 cut(s) | 1376 |
| BstKTI | GATC | 7 cut(s) | 859, 1255, 1323, 1975, 2065, 2242, 2272 |
| BstMAI | GTCTC | 1 cut(s) | 1846 |
| BstMBI | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 899, 1534, 1598, 2129 |
| BstNI | CCWGG | 1 cut(s) | 2274 |
| BstNSI | RCATGY | 4 cut(s) | 547, 827, 1089, 1390 |
| BstSCI | CCNGG | 3 cut(s) | 17, 1721, 2272 |
| BstSFI | CTRYAG | 1 cut(s) | 1011 |
| BstSLI | GKGCMC | 2 cut(s) | 1723, 1947 |
| BstSNI | TACGTA | 1 cut(s) | 98 |
| BstUI | CGCG | 1 cut(s) | 662 |
| BstV1I | GCAGC | 6 cut(s) | 1094, 1301, 1315, 1330, 1905, 2144 |
| BstV2I | GAAGAC | 1 cut(s) | 1200 |
| BstX2I | RGATCY | 4 cut(s) | 856, 1320, 2239, 2269 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2320 |
| BstYI | RGATCY | 4 cut(s) | 856, 1320, 2239, 2269 |
| BstZ17I | GTATAC | 1 cut(s) | 938 |
| BsuRI | GGCC | 8 cut(s) | 59, 341, 504, 987, 1116, 1721, 2004, 2189 |
| BtgZI | GCGATG | 2 cut(s) | 398, 1674 |
| BtrI | CACGTC | 1 cut(s) | 1802 |
| BtsCI | GGATG | 3 cut(s) | 463, 577, 2145 |
| BtsIMutI | CAGTG | 1 cut(s) | 442 |
| BveI | ACCTGC | 2 cut(s) | 571, 1469 |
| Cac8I | GCNNGC | 5 cut(s) | 1080, 1372, 1599, 1891, 1918 |
| CciI | TCATGA | 1 cut(s) | 969 |
| CfoI | GCGC | 1 cut(s) | 1376 |
| Cfr13I | GGNCC | 5 cut(s) | 58, 340, 1719, 1720, 2155 |
| CseI | GACGC | 2 cut(s) | 418, 1868 |
| Csp6I | GTAC | 6 cut(s) | 112, 151, 217, 333, 1755, 2293 |
| CviQI | GTAC | 6 cut(s) | 112, 151, 217, 333, 1755, 2293 |
| DpnI | GATC | 7 cut(s) | 858, 1254, 1322, 1974, 2064, 2241, 2271 |
| DpnII | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| DraIII | CACNNNGTG | 1 cut(s) | 187 |
| EaeI | YGGCCR | 3 cut(s) | 1114, 2002, 2187 |
| Eam1104I | CTCTTC | 3 cut(s) | 270, 905, 1311 |
| EarI | CTCTTC | 3 cut(s) | 270, 905, 1311 |
| Eco105I | TACGTA | 1 cut(s) | 98 |
| Eco24I | GRGCYC | 1 cut(s) | 1723 |
| Eco31I | GGTCTC | 1 cut(s) | 1846 |
| Eco47I | GGWCC | 1 cut(s) | 2155 |
| Eco57I | CTGAAG | 2 cut(s) | 294, 963 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1719 |
| EcoRI | GAATTC | 1 cut(s) | 792 |
| EcoRII | CCWGG | 1 cut(s) | 2272 |
| EcoT38I | GRGCYC | 1 cut(s) | 1723 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1331, 1363 |
| FaqI | GGGAC | 3 cut(s) | 25, 1844, 2231 |
| FauI | CCCGC | 1 cut(s) | 62 |
| FauNDI | CATATG | 1 cut(s) | 2176 |
| FblI | GTMKAC | 1 cut(s) | 937 |
| Fnu4HI | GCNGC | 6 cut(s) | 1083, 1290, 1329, 1344, 1894, 2133 |
| FokI | GGATG | 3 cut(s) | 470, 584, 2132 |
| FriOI | GRGCYC | 1 cut(s) | 1723 |
| Fsp4HI | GCNGC | 6 cut(s) | 1083, 1290, 1329, 1344, 1894, 2133 |
| FspBI | CTAG | 3 cut(s) | 933, 1284, 2039 |
| GlaI | GCGC | 1 cut(s) | 1375 |
| GluI | GCNGC | 6 cut(s) | 1083, 1290, 1329, 1344, 1894, 2133 |
| GsaI | CCCAGC | 1 cut(s) | 258 |
| GsuI | CTGGAG | 2 cut(s) | 1325, 1332 |
| HaeIII | GGCC | 8 cut(s) | 59, 341, 504, 987, 1116, 1721, 2004, 2189 |
| HapII | CCGG | 3 cut(s) | 19, 1723, 2284 |
| HgaI | GACGC | 2 cut(s) | 418, 1868 |
| HhaI | GCGC | 1 cut(s) | 1376 |
| Hin1I | GRCGYC | 1 cut(s) | 1860 |
| Hin6I | GCGC | 1 cut(s) | 1374 |
| HinP1I | GCGC | 1 cut(s) | 1374 |
| HindIII | AAGCTT | 4 cut(s) | 29, 1214, 1509, 1595 |
| HinfI | GANTC | 7 cut(s) | 138, 657, 713, 764, 1000, 1300, 1994 |
| HpaII | CCGG | 3 cut(s) | 19, 1723, 2284 |
| HphI | GGTGA | 3 cut(s) | 602, 1112, 1718 |
| Hpy166II | GTNNAC | 2 cut(s) | 217, 938 |
| Hpy188I | TCNGA | 7 cut(s) | 288, 327, 394, 798, 999, 1005, 1635 |
| Hpy188III | TCNNGA | 7 cut(s) | 353, 970, 1186, 1304, 1499, 1902, 1970 |
| Hpy8I | GTNNAC | 2 cut(s) | 217, 938 |
| Hpy99I | CGWCG | 1 cut(s) | 412 |
| HpyAV | CCTTC | 5 cut(s) | 49, 67, 460, 916, 2293 |
| HpyCH4III | ACNGT | 2 cut(s) | 835, 1759 |
| HpyCH4IV | ACGT | 4 cut(s) | 97, 122, 419, 1801 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 899, 1534, 1598, 2129 |
| HpySE526I | ACGT | 4 cut(s) | 97, 122, 419, 1801 |
| Hsp92I | GRCGYC | 1 cut(s) | 1860 |
| HspAI | GCGC | 1 cut(s) | 1374 |
| Kzo9I | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| LmnI | GCTCC | 2 cut(s) | 1960, 2176 |
| Lsp1109I | GCAGC | 6 cut(s) | 1094, 1301, 1315, 1330, 1905, 2144 |
| LweI | GCATC | 4 cut(s) | 562, 1536, 1903, 2037 |
| MaeI | CTAG | 3 cut(s) | 933, 1284, 2039 |
| MaeII | ACGT | 4 cut(s) | 97, 122, 419, 1801 |
| MaeIII | GTNAC | 5 cut(s) | 590, 613, 1060, 1759, 2249 |
| MalI | GATC | 7 cut(s) | 858, 1254, 1322, 1974, 2064, 2241, 2271 |
| MboI | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| MfeI | CAATTG | 2 cut(s) | 62, 1269 |
| MflI | RGATCY | 4 cut(s) | 856, 1320, 2239, 2269 |
| MhlI | GDGCHC | 3 cut(s) | 1681, 1723, 1947 |
| MlsI | TGGCCA | 1 cut(s) | 2189 |
| MluNI | TGGCCA | 1 cut(s) | 2189 |
| MlyI | GAGTC | 4 cut(s) | 132, 666, 773, 1009 |
| MmeI | TCCRAC | 2 cut(s) | 435, 1442 |
| Mox20I | TGGCCA | 1 cut(s) | 2189 |
| MscI | TGGCCA | 1 cut(s) | 2189 |
| MseI | TTAA | 3 cut(s) | 837, 1524, 1932 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1688, 1785, 1950, 2109 |
| Msp20I | TGGCCA | 1 cut(s) | 2189 |
| MspA1I | CMGCKG | 2 cut(s) | 1847, 2135 |
| MspI | CCGG | 3 cut(s) | 19, 1723, 2284 |
| MspR9I | CCNGG | 3 cut(s) | 19, 1723, 2274 |
| MunI | CAATTG | 2 cut(s) | 62, 1269 |
| Mva1269I | GAATGC | 5 cut(s) | 232, 535, 1035, 1168, 2310 |
| MvaI | CCWGG | 1 cut(s) | 2274 |
| MvnI | CGCG | 1 cut(s) | 662 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 899, 1534, 1598, 2129 |
| NciI | CCSGG | 2 cut(s) | 19, 1723 |
| NdeI | CATATG | 1 cut(s) | 2176 |
| NdeII | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| NlaIV | GGNNCC | 6 cut(s) | 405, 1720, 1721, 1962, 2157, 2271 |
| NmuCI | GTSAC | 2 cut(s) | 590, 1060 |
| NspI | RCATGY | 4 cut(s) | 547, 827, 1089, 1390 |
| PagI | TCATGA | 1 cut(s) | 969 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 416 |
| PctI | GAATGC | 5 cut(s) | 232, 535, 1035, 1168, 2310 |
| PfeI | GAWTC | 3 cut(s) | 713, 1300, 1994 |
| PflFI | GACNNNGTC | 1 cut(s) | 656 |
| PkrI | GCNGC | 6 cut(s) | 1084, 1291, 1330, 1345, 1895, 2134 |
| PleI | GAGTC | 4 cut(s) | 132, 665, 772, 1008 |
| PpsI | GAGTC | 4 cut(s) | 132, 665, 772, 1008 |
| Ppu21I | YACGTR | 1 cut(s) | 98 |
| Psp6I | CCWGG | 1 cut(s) | 2272 |
| PspFI | CCCAGC | 1 cut(s) | 254 |
| PspGI | CCWGG | 1 cut(s) | 2272 |
| PspN4I | GGNNCC | 6 cut(s) | 405, 1720, 1721, 1962, 2157, 2271 |
| PspOMI | GGGCCC | 1 cut(s) | 1719 |
| PspPI | GGNCC | 5 cut(s) | 58, 340, 1719, 1720, 2155 |
| PsuI | RGATCY | 4 cut(s) | 856, 1320, 2239, 2269 |
| PsyI | GACNNNGTC | 1 cut(s) | 656 |
| PvuII | CAGCTG | 2 cut(s) | 1847, 2135 |
| RsaI | GTAC | 6 cut(s) | 113, 152, 218, 334, 1756, 2294 |
| RsaNI | GTAC | 6 cut(s) | 112, 151, 217, 333, 1755, 2293 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1688, 1785, 1950, 2109 |
| SaqAI | TTAA | 3 cut(s) | 837, 1524, 1932 |
| SatI | GCNGC | 6 cut(s) | 1083, 1290, 1329, 1344, 1894, 2133 |
| Sau3AI | GATC | 7 cut(s) | 856, 1252, 1320, 1972, 2062, 2239, 2269 |
| Sau96I | GGNCC | 5 cut(s) | 58, 340, 1719, 1720, 2155 |
| ScaI | AGTACT | 1 cut(s) | 334 |
| SchI | GAGTC | 4 cut(s) | 132, 666, 773, 1009 |
| ScrFI | CCNGG | 3 cut(s) | 19, 1723, 2274 |
| SduI | GDGCHC | 3 cut(s) | 1681, 1723, 1947 |
| SfaNI | GCATC | 4 cut(s) | 562, 1536, 1903, 2037 |
| SfcI | CTRYAG | 1 cut(s) | 1011 |
| SinI | GGWCC | 1 cut(s) | 2155 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1688, 1785, 1950, 2109 |
| SmlI | CTYRAG | 2 cut(s) | 506, 1497 |
| SmoI | CTYRAG | 2 cut(s) | 506, 1497 |
| SnaBI | TACGTA | 1 cut(s) | 98 |
| SsiI | CCGC | 5 cut(s) | 69, 365, 662, 902, 2149 |
| SspI | AATATT | 2 cut(s) | 1929, 2194 |
| SspMI | CTAG | 3 cut(s) | 933, 1284, 2039 |
| StyD4I | CCNGG | 3 cut(s) | 17, 1721, 2272 |
| TaaI | ACNGT | 2 cut(s) | 835, 1759 |
| TaiI | ACGT | 4 cut(s) | 100, 125, 422, 1804 |
| TaqI | TCGA | 3 cut(s) | 728, 1255, 1911 |
| TatI | WGTACW | 4 cut(s) | 111, 150, 216, 332 |
| TfiI | GAWTC | 3 cut(s) | 713, 1300, 1994 |
| Tru1I | TTAA | 3 cut(s) | 837, 1524, 1932 |
| Tru9I | TTAA | 3 cut(s) | 837, 1524, 1932 |
| TscAI | CASTG | 1 cut(s) | 442 |
| TseFI | GTSAC | 2 cut(s) | 590, 1060 |
| TseI | GCWGC | 6 cut(s) | 1082, 1289, 1328, 1343, 1893, 2132 |
| Tsp45I | GTSAC | 2 cut(s) | 590, 1060 |
| TspRI | CASTG | 1 cut(s) | 442 |
| Tth111I | GACNNNGTC | 1 cut(s) | 656 |
| VpaK11BI | GGWCC | 1 cut(s) | 2155 |
| XapI | RAATTY | 3 cut(s) | 792, 1492, 1726 |
| XceI | RCATGY | 4 cut(s) | 547, 827, 1089, 1390 |
| XmiI | GTMKAC | 1 cut(s) | 937 |
| XspI | CTAG | 3 cut(s) | 933, 1284, 2039 |
| ZrmI | AGTACT | 1 cut(s) | 334 |