RchiOBHm_Chr5g0032421

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
26057878 .. 26059926
2049 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31160

Sequence Viewer

Length: 2049 bp
ATGCATGATCGACAATGTACTCTGCAAGCATCCCTAAAAATGGGTGCTCTAGTGGCGCTAGTATTATGTATCTTCTTTCACAAGGGCTTAACAGAAACTCCATTAACCTTCAATTTCTCTTCCTTCCTCGGTGAATATGACAATACTGTTATATTAACAGAAGGAGATGCCAACGTTGGTAACCCATTCCTTCACCTAACAAAAGACAACATAGGTGAACTAGAAACTATGAGTGTTGGTCGAGCCTTCTACCGTGAACCCTTCCTCCTTTGGGACTATGCCACAGAGAAAATGGCGGATTTCTCCACAAGTTTTACATTCGCCATCATCAGTACAGACGAGACAGCACCCTCCTGCGGTGCTGGGTTTGTGTTCTTCCTAGCACCATATGGAACGATACTCTACAGCTCATTAGGAGCTGGAGCCAGTCTTGGCCTCCCCATCAACAGCACACAGCAAAACGTCACCGTCCCGAAGAGTCAGTACCCATTTGTGGCAGTGGAGTTTGATATCTACCCGAATATACTTCCACCCGTAGACGATCCCCGCTATCAACACGTTGGCATCGACGTCAACTCTATCAGGTCTAGTAAAACCGCTCCTTGGAATCATGCTACACTTTCATCTCATAACTATCTTCAAGGAGATGAAGTCAATACTGCGTGGGTTAGTTATAATTCTACCACGAAGAATCTTAGTGTGGCCTTCACTAGTTTTGTACATGATGACCCGGTGATTAGTTATCTTTATTACGTTGTTGATCTGAGGCAGTGCTTGCCGGATGTGGTCATTGTTGGGTTCTCTGCGGCAACGGGGAATCAAACTGCAATGCATAAGATCATCTCTTGGAATTTTACTTCTACTTCTTTGGAGATTCCTCCGCCAATCCCCGCCTACTCTAATGTATCAGCAAGACAAGTTGTCTGGTTGATTATTGGTGGGTGTATTTTTATAGTTGGCGGGTTCGTCTGGTGGAAGGAAAGGGAAACCAGAGAGAGTGATAGAGATGGTATGATTACTGATGGGATCAAATATGAATTGCAAAACGGGTTTGGCCCAAGACAGTTTACATACAGTGAATTGGCTCATTCTACAAGTAAGTTTGCAGAGGGAGAAAAGCTTGGAGAGGGAGGATTTGGTGGGGTTTATAGAGGCTTCATAAAACAGTTGAACTTGTATATTGCTGTTAAGAGGATATCCAAGGAGTCTAGACAAGGGTTGAAGGAGTATGCTTCAGAACTAAGGACTATCAGTCGACTTAGGCATCGAAATGTGGTGCAACTCATTGGTTGGTGCCATGAAAAAAGAGAACTTTTACTTGTTTACGAGTTAATGCCCAACAGCAGCTTAGATTTCCATCTGTTCAAAGCACAAAGCTTGTTGATTTGGGAGGTAAGATACAGAATTGCTTTAGGCTTGGCCTCCGGACTGTTGTATCTACACGAAGAATGGGAACAATGTGTACTACATAGGGATATTAAGTCCTCTAATGTGATGTTGGATTCAAATTTCAATGCCAAACTTGGGGATTTTGGGTTAGCTCGACTCGTGGACCATGGAAAACAATCACAAACAACAGTTCTGGCTGGAACCATGGGCTACATGGCTCCAGAATATATAACCACGGGAAAGGCTAGCAGGGAATCTGATGTCTATAGCTTTGGGGTTGTTGCTATGGAGATAGCTTGTGGGAGAAAACCCATCGATTCCAAGTTTGAAAGTGATCAAATCAGCATGGTGGAATGGATTTCTGAGCTTTATGCAGAAGGAAAAGTTCTCGAAGCGGCCGACCCAAAACTCTGTGGAGAATTTGATGAGAAGCAAATGGAGTGCTTGCTGATTGTTGGATTGTGGTGCGCTCACTTCAATCACAACATCAGGCCTTCGATACAAGAAGCTATCCAAGTGCTTAACTTCAAACTTCCATTGCCCATTCTCCCATCCAATATGTCGATGGCCACCTTTGCGCCTTCAGTTTCATTCTCAACATTGTCAAATGATACTACTGGTTTTGAAAAAAGTCAAACCAAGTCCACCTTTGTTCACTAA

Protein Analysis

682

Amino Acids

76.24

Weight (kDa)

5.62

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 35 - 289 1.1e-59 Legume lectin domain
Pkinase PF00069 369 - 635 1.2e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 371 - 581 8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 675
AatII GACGTC 1 cut(s) 573
AccB1I GGYRCC 1 cut(s) 1293
AccBSI CCGCTC 1 cut(s) 599
AccI GTMKAC 2 cut(s) 537, 1255
AccIII TCCGGA 1 cut(s) 1424
AciI CCGC 9 cut(s) 296, 357, 547, 597, 806, 881, 891, 960, 1784
AclI AACGTT 1 cut(s) 174
AclWI GGATC 2 cut(s) 536, 1034
AcoI YGGCCR 2 cut(s) 1785, 1956
AcsI RAATTY 3 cut(s) 850, 1507, 1808
AcuI CTGAAG 2 cut(s) 1218, 1956
AcyI GRCGYC 1 cut(s) 570
AfaI GTAC 5 cut(s) 19, 334, 485, 720, 1464
AfiI CCNNNNNNNGG 6 cut(s) 40, 271, 356, 493, 603, 1524
AflIII ACRYGT 1 cut(s) 556
AhdI GACNNNNNGTC 2 cut(s) 920, 1251
AhlI ACTAGT 1 cut(s) 710
AloI GAACNNNNNNTCC 2 cut(s) 249, 281
Alw21I GWGCWC 1 cut(s) 49
Alw26I GTCTC 1 cut(s) 335
AlwI GGATC 2 cut(s) 536, 1034
Aor13HI TCCGGA 1 cut(s) 1424
AoxI GGCC 7 cut(s) 433, 702, 1054, 1419, 1785, 1880, 1956
ApeKI GCWGC 1 cut(s) 1344
ApoI RAATTY 3 cut(s) 850, 1507, 1808
AspLEI GCGC 3 cut(s) 58, 1859, 1969
AspS9I GGNCC 2 cut(s) 1055, 1552
AsuC2I CCSGG 1 cut(s) 731
AsuHPI GGTGA 5 cut(s) 143, 185, 227, 457, 745
AsuNHI GCTAGC 1 cut(s) 1634
AvaII GGWCC 1 cut(s) 1552
BaeI ACNNNNGTAYC 2 cut(s) 1418, 1451
BalI TGGCCA 1 cut(s) 1958
BanI GGYRCC 1 cut(s) 1293
BarI GAAGNNNNNNTAC 2 cut(s) 467, 499
BauI CACGAG 1 cut(s) 1547
Bbv12I GWGCWC 1 cut(s) 49
BbvI GCAGC 1 cut(s) 1356
BccI CCATC 8 cut(s) 332, 449, 1001, 1016, 1365, 1709, 1948, 1948
BclI TGATCA 1 cut(s) 1723
BcnI CCSGG 1 cut(s) 731
BcoDI GTCTC 1 cut(s) 335
BcuI ACTAGT 1 cut(s) 710
BfaI CTAG 8 cut(s) 50, 59, 221, 380, 588, 711, 1209, 1635
BfmI CTRYAG 2 cut(s) 403, 1654
BfoI RGCGCY 1 cut(s) 59
BisI GCNGC 3 cut(s) 807, 1345, 1785
BlsI GCNGC 3 cut(s) 808, 1346, 1786
Bme1390I CCNGG 1 cut(s) 731
Bme18I GGWCC 1 cut(s) 1552
BmeRI GACNNNNNGTC 2 cut(s) 920, 1251
BmgT120I GGNCC 2 cut(s) 1055, 1552
BmiI GGNNCC 4 cut(s) 424, 1295, 1591, 1608
BmrFI CCNGG 1 cut(s) 731
BmsI GCATC 4 cut(s) 38, 157, 573, 1273
BmtI GCTAGC 1 cut(s) 1638
BpmI CTGGAG 2 cut(s) 441, 1593
BpuMI CCSGG 1 cut(s) 731
Bsa29I ATCGAT 1 cut(s) 1704
BsaBI GATNNNNATC 1 cut(s) 1356
BsaHI GRCGYC 1 cut(s) 570
BsaJI CCNNGG 6 cut(s) 127, 602, 1200, 1555, 1593, 1623
BsaWI WCCGGW 1 cut(s) 1424
BsaXI ACNNNNNCTCC 6 cut(s) 82, 112, 249, 279, 636, 666
Bsc4I CCNNNNNNNGG 6 cut(s) 40, 271, 356, 493, 603, 1524
Bse1I ACTGG 2 cut(s) 426, 2011
Bse3DI GCAATG 2 cut(s) 834, 1925
Bse8I GATNNNNATC 1 cut(s) 1356
BseAI TCCGGA 1 cut(s) 1424
BseCI ATCGAT 1 cut(s) 1704
BseDI CCNNGG 6 cut(s) 127, 602, 1200, 1555, 1593, 1623
BseGI GGATG 3 cut(s) 29, 787, 1940
BseJI GATNNNNATC 1 cut(s) 1356
BseLI CCNNNNNNNGG 6 cut(s) 40, 271, 356, 493, 603, 1524
BseMI GCAATG 2 cut(s) 834, 1925
BseMII CTCAG 2 cut(s) 755, 1743
BseNI ACTGG 2 cut(s) 426, 2011
BseX3I CGGCCG 1 cut(s) 1785
BseXI GCAGC 1 cut(s) 1356
BseYI CCCAGC 1 cut(s) 362
Bsh1285I CGRYCG 1 cut(s) 1788
BshFI GGCC 7 cut(s) 435, 704, 1056, 1421, 1787, 1882, 1958
BshNI GGYRCC 1 cut(s) 1293
BshVI ATCGAT 1 cut(s) 1704
BsiEI CGRYCG 1 cut(s) 1788
BsiHKAI GWGCWC 1 cut(s) 49
BsiSI CCGG 3 cut(s) 731, 779, 1425
BslFI GGGAC 2 cut(s) 287, 455
BslI CCNNNNNNNGG 6 cut(s) 40, 271, 356, 493, 603, 1524
BsmAI GTCTC 1 cut(s) 335
BsmFI GGGAC 2 cut(s) 287, 455
BsnI GGCC 7 cut(s) 435, 704, 1056, 1421, 1787, 1882, 1958
Bsp1286I GDGCHC 1 cut(s) 49
Bsp13I TCCGGA 1 cut(s) 1424
Bsp1407I TGTACA 1 cut(s) 718
Bsp143I GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
Bsp19I CCATGG 2 cut(s) 1555, 1593
BspACI CCGC 9 cut(s) 296, 357, 547, 597, 806, 881, 891, 960, 1784
BspANI GGCC 7 cut(s) 435, 704, 1056, 1421, 1787, 1882, 1958
BspCNI CTCAG 2 cut(s) 756, 1744
BspDI ATCGAT 1 cut(s) 1704
BspEI TCCGGA 1 cut(s) 1424
BspLI GGNNCC 4 cut(s) 424, 1295, 1591, 1608
BspOI GCTAGC 1 cut(s) 1638
BspPI GGATC 2 cut(s) 536, 1034
BspT107I GGYRCC 1 cut(s) 1293
BsrBI CCGCTC 1 cut(s) 599
BsrDI GCAATG 2 cut(s) 834, 1925
BsrGI TGTACA 1 cut(s) 718
BsrI ACTGG 2 cut(s) 426, 2011
BssECI CCNNGG 6 cut(s) 127, 602, 1200, 1555, 1593, 1623
BssMI GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
BssNI GRCGYC 1 cut(s) 570
BssSI CACGAG 1 cut(s) 1547
BssT1I CCWWGG 4 cut(s) 602, 1200, 1555, 1593
Bst2BI CACGAG 1 cut(s) 1547
Bst4CI ACNGT 8 cut(s) 148, 254, 469, 1065, 1076, 1167, 1431, 1579
Bst6I CTCTTC 2 cut(s) 124, 470
BstACI GRCGYC 1 cut(s) 570
BstAPI GCANNNNNTGC 1 cut(s) 775
BstAUI TGTACA 1 cut(s) 718
BstC8I GCNNGC 4 cut(s) 27, 776, 1636, 1835
BstDEI CTNAG 6 cut(s) 695, 764, 1241, 1259, 1348, 1752
BstDSI CCRYGG 3 cut(s) 1555, 1593, 1623
BstEII GGTNACC 1 cut(s) 179
BstF5I GGATG 3 cut(s) 29, 787, 1940
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 3 cut(s) 58, 1859, 1969
BstKTI GATC 6 cut(s) 10, 544, 763, 840, 1029, 1726
BstMAI GTCTC 1 cut(s) 335
BstMBI GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
BstMCI CGRYCG 1 cut(s) 1788
BstMWI GCNNNNNNNGC 3 cut(s) 53, 775, 1964
BstPI GGTNACC 1 cut(s) 179
BstSCI CCNGG 1 cut(s) 729
BstSFI CTRYAG 2 cut(s) 403, 1654
BstV1I GCAGC 1 cut(s) 1356
BstZI CGGCCG 1 cut(s) 1785
Bsu15I ATCGAT 1 cut(s) 1704
BsuRI GGCC 7 cut(s) 435, 704, 1056, 1421, 1787, 1882, 1958
BsuTUI ATCGAT 1 cut(s) 1704
BtgI CCRYGG 3 cut(s) 1555, 1593, 1623
BtsCI GGATG 3 cut(s) 29, 787, 1940
BtsI GCAGTG 2 cut(s) 504, 776
BtsIMutI CAGTG 3 cut(s) 504, 776, 1081
Cac8I GCNNGC 4 cut(s) 27, 776, 1636, 1835
CfoI GCGC 3 cut(s) 58, 1859, 1969
Cfr13I GGNCC 2 cut(s) 1055, 1552
ClaI ATCGAT 1 cut(s) 1704
Csp6I GTAC 5 cut(s) 18, 333, 484, 719, 1463
CviAII CATG 8 cut(s) 5, 611, 722, 1298, 1556, 1594, 1603, 1735
CviQI GTAC 5 cut(s) 18, 333, 484, 719, 1463
DdeI CTNAG 6 cut(s) 695, 764, 1241, 1259, 1348, 1752
DpnI GATC 6 cut(s) 9, 543, 762, 839, 1028, 1725
DpnII GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
DriI GACNNNNNGTC 2 cut(s) 920, 1251
EaeI YGGCCR 2 cut(s) 1785, 1956
EagI CGGCCG 1 cut(s) 1785
Eam1104I CTCTTC 2 cut(s) 124, 470
Eam1105I GACNNNNNGTC 2 cut(s) 920, 1251
EarI CTCTTC 2 cut(s) 124, 470
EciI GGCGGA 2 cut(s) 311, 870
EclXI CGGCCG 1 cut(s) 1785
Eco130I CCWWGG 4 cut(s) 602, 1200, 1555, 1593
Eco147I AGGCCT 1 cut(s) 1882
Eco32I GATATC 2 cut(s) 511, 1197
Eco47I GGWCC 1 cut(s) 1552
Eco52I CGGCCG 1 cut(s) 1785
Eco57I CTGAAG 2 cut(s) 1218, 1956
Eco91I GGTNACC 1 cut(s) 179
EcoO65I GGTNACC 1 cut(s) 179
EcoRV GATATC 2 cut(s) 511, 1197
EcoT14I CCWWGG 4 cut(s) 602, 1200, 1555, 1593
EcoT22I ATGCAT 2 cut(s) 6, 834
ErhI CCWWGG 4 cut(s) 602, 1200, 1555, 1593
FaeI CATG 8 cut(s) 8, 614, 725, 1301, 1559, 1597, 1606, 1738
FalI AAGNNNNNCTT 1 cut(s) 2021
FaqI GGGAC 2 cut(s) 287, 455
FatI CATG 8 cut(s) 4, 610, 721, 1297, 1555, 1593, 1602, 1734
FauI CCCGC 3 cut(s) 554, 898, 953
FauNDI CATATG 1 cut(s) 388
FbaI TGATCA 1 cut(s) 1723
FblI GTMKAC 2 cut(s) 537, 1255
Fnu4HI GCNGC 3 cut(s) 807, 1345, 1785
FokI GGATG 3 cut(s) 16, 794, 1927
Fsp4HI GCNGC 3 cut(s) 807, 1345, 1785
FspBI CTAG 8 cut(s) 50, 59, 221, 380, 588, 711, 1209, 1635
GlaI GCGC 3 cut(s) 57, 1858, 1968
GluI GCNGC 3 cut(s) 807, 1345, 1785
GsaI CCCAGC 1 cut(s) 366
GsuI CTGGAG 2 cut(s) 441, 1593
HaeII RGCGCY 1 cut(s) 59
HaeIII GGCC 7 cut(s) 435, 704, 1056, 1421, 1787, 1882, 1958
HapII CCGG 3 cut(s) 731, 779, 1425
HhaI GCGC 3 cut(s) 58, 1859, 1969
Hin1I GRCGYC 1 cut(s) 570
Hin1II CATG 8 cut(s) 8, 614, 725, 1301, 1559, 1597, 1606, 1738
Hin6I GCGC 3 cut(s) 56, 1857, 1967
HinP1I GCGC 3 cut(s) 56, 1857, 1967
HincII GTYRAC 2 cut(s) 574, 1256
HindII GTYRAC 2 cut(s) 574, 1256
HindIII AAGCTT 2 cut(s) 1118, 1375
HpaII CCGG 3 cut(s) 731, 779, 1425
HphI GGTGA 5 cut(s) 143, 185, 227, 457, 745
Hpy188I TCNGA 4 cut(s) 765, 1237, 1648, 1753
Hpy188III TCNNGA 5 cut(s) 472, 1209, 1425, 1610, 1778
Hpy99I CGWCG 1 cut(s) 572
HpyCH4III ACNGT 8 cut(s) 148, 254, 469, 1065, 1076, 1167, 1431, 1579
HpyCH4IV ACGT 5 cut(s) 174, 462, 558, 570, 753
HpyCH4V TGCA 8 cut(s) 4, 25, 827, 832, 1042, 1106, 1279, 1763
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 775, 1964
HpyF3I CTNAG 6 cut(s) 695, 764, 1241, 1259, 1348, 1752
HpySE526I ACGT 5 cut(s) 174, 462, 558, 570, 753
Hsp92I GRCGYC 1 cut(s) 570
Hsp92II CATG 8 cut(s) 8, 614, 725, 1301, 1559, 1597, 1606, 1738
HspAI GCGC 3 cut(s) 56, 1857, 1967
Kpn2I TCCGGA 1 cut(s) 1424
Ksp22I TGATCA 1 cut(s) 1723
Kzo9I GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
LmnI GCTCC 4 cut(s) 416, 422, 604, 1612
Lsp1109I GCAGC 1 cut(s) 1356
LweI GCATC 4 cut(s) 38, 157, 573, 1273
MaeI CTAG 8 cut(s) 50, 59, 221, 380, 588, 711, 1209, 1635
MaeII ACGT 5 cut(s) 174, 462, 558, 570, 753
MaeIII GTNAC 2 cut(s) 179, 463
MalI GATC 6 cut(s) 9, 543, 762, 839, 1028, 1725
MbiI CCGCTC 1 cut(s) 599
MboI GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
MboII GAAGA 7 cut(s) 64, 111, 367, 487, 629, 700, 1457
MhlI GDGCHC 1 cut(s) 49
MlsI TGGCCA 1 cut(s) 1958
MluCI AATT 8 cut(s) 112, 676, 850, 1037, 1079, 1404, 1507, 1808
MluNI TGGCCA 1 cut(s) 1958
MlyI GAGTC 3 cut(s) 487, 1214, 1539
MmeI TCCRAC 2 cut(s) 1479, 1825
Mox20I TGGCCA 1 cut(s) 1958
Mph1103I ATGCAT 2 cut(s) 6, 834
MroI TCCGGA 1 cut(s) 1424
MscI TGGCCA 1 cut(s) 1958
MseI TTAA 7 cut(s) 89, 104, 155, 1188, 1331, 1479, 1911
MslI CAYNNNNRTG 1 cut(s) 1269
Msp20I TGGCCA 1 cut(s) 1958
MspI CCGG 3 cut(s) 731, 779, 1425
MspR9I CCNGG 1 cut(s) 731
MwoI GCNNNNNNNGC 3 cut(s) 53, 775, 1964
NciI CCSGG 1 cut(s) 731
NcoI CCATGG 2 cut(s) 1555, 1593
NdeI CATATG 1 cut(s) 388
NdeII GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
NheI GCTAGC 1 cut(s) 1634
NlaIII CATG 8 cut(s) 8, 614, 725, 1301, 1559, 1597, 1606, 1738
NlaIV GGNNCC 4 cut(s) 424, 1295, 1591, 1608
NmuCI GTSAC 1 cut(s) 463
NsiI ATGCAT 2 cut(s) 6, 834
PceI AGGCCT 1 cut(s) 1882
PcsI WCGNNNNNNNCGW 2 cut(s) 564, 1785
PfeI GAWTC 7 cut(s) 607, 691, 817, 874, 1502, 1643, 1706
PkrI GCNGC 3 cut(s) 808, 1346, 1786
PleI GAGTC 3 cut(s) 486, 1213, 1539
PpsI GAGTC 3 cut(s) 486, 1213, 1539
PsiI TTATAA 1 cut(s) 675
Psp1406I AACGTT 1 cut(s) 174
PspEI GGTNACC 1 cut(s) 179
PspFI CCCAGC 1 cut(s) 362
PspN4I GGNNCC 4 cut(s) 424, 1295, 1591, 1608
PspPI GGNCC 2 cut(s) 1055, 1552
PsrI GAACNNNNNNTAC 2 cut(s) 1446, 1478
RsaI GTAC 5 cut(s) 19, 334, 485, 720, 1464
RsaNI GTAC 5 cut(s) 18, 333, 484, 719, 1463
RseI CAYNNNNRTG 1 cut(s) 1269
SalI GTCGAC 1 cut(s) 1254
SaqAI TTAA 7 cut(s) 89, 104, 155, 1188, 1331, 1479, 1911
SatI GCNGC 3 cut(s) 807, 1345, 1785
Sau3AI GATC 6 cut(s) 7, 541, 760, 837, 1026, 1723
Sau96I GGNCC 2 cut(s) 1055, 1552
SchI GAGTC 3 cut(s) 487, 1214, 1539
ScrFI CCNGG 1 cut(s) 731
SduI GDGCHC 1 cut(s) 49
SfaNI GCATC 4 cut(s) 38, 157, 573, 1273
SfcI CTRYAG 2 cut(s) 403, 1654
SinI GGWCC 1 cut(s) 1552
SmiMI CAYNNNNRTG 1 cut(s) 1269
SpeI ACTAGT 1 cut(s) 710
Sse9I AATT 8 cut(s) 112, 676, 850, 1037, 1079, 1404, 1507, 1808
SseBI AGGCCT 1 cut(s) 1882
SsiI CCGC 9 cut(s) 296, 357, 547, 597, 806, 881, 891, 960, 1784
SspMI CTAG 8 cut(s) 50, 59, 221, 380, 588, 711, 1209, 1635
StuI AGGCCT 1 cut(s) 1882
StyD4I CCNGG 1 cut(s) 729
StyI CCWWGG 4 cut(s) 602, 1200, 1555, 1593
TaaI ACNGT 8 cut(s) 148, 254, 469, 1065, 1076, 1167, 1431, 1579
TaiI ACGT 5 cut(s) 177, 465, 561, 573, 756
TasI AATT 8 cut(s) 112, 676, 850, 1037, 1079, 1404, 1507, 1808
TatI WGTACW 4 cut(s) 17, 332, 718, 1462
TauI GCSGC 2 cut(s) 809, 1787
TfiI GAWTC 7 cut(s) 607, 691, 817, 874, 1502, 1643, 1706
Tru1I TTAA 7 cut(s) 89, 104, 155, 1188, 1331, 1479, 1911
Tru9I TTAA 7 cut(s) 89, 104, 155, 1188, 1331, 1479, 1911
TscAI CASTG 3 cut(s) 504, 776, 1081
TseFI GTSAC 1 cut(s) 463
TseI GCWGC 1 cut(s) 1344
Tsp45I GTSAC 1 cut(s) 463
TspDTI ATGAA 6 cut(s) 612, 663, 1050, 1147, 1314, 1968
TspRI CASTG 3 cut(s) 504, 776, 1081
VpaK11BI GGWCC 1 cut(s) 1552
XapI RAATTY 3 cut(s) 850, 1507, 1808
XbaI TCTAGA 1 cut(s) 1208
XcmI CCANNNNNNNNNTGG 3 cut(s) 289, 1600, 1951
XmiI GTMKAC 2 cut(s) 537, 1255
XspI CTAG 8 cut(s) 50, 59, 221, 380, 588, 711, 1209, 1635
ZraI GACGTC 1 cut(s) 571
Zsp2I ATGCAT 2 cut(s) 6, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.