Rmu_sc0003031.1_g000001

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003031.1
Physical Location & Seq
Reverse (-)
2 .. 1709
1708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003031.1_g000001.1.cds

Sequence Viewer

Length: 1708 bp
atggctgtcatcataacagcactccagttctcaccagagcggcttcagttccttcttcttctcttgtttgttttaaccttgtctgcaactccattgactttcaacttctccagctttcccgccaacaccaggactctatttctagagggagatgctttcaccgacggctccctccgactcaccaaaagtgctcttgatgacgcaaggaactggagcaccggtagagccaccttcggtgaatcgttcctcctccggcagaatgaaaaactagctgatttcacttcaagtttcatattctccattgacacctccaatgaccccctctgcggtgacggcttggtgttcttccttgctccaaaaggctccttactcgaccaggccttagatagaggcagcacacttggactccctgtcaacactacgctgccaaaatttaccactaggtactcgtttgtggcagtcgagtttgatatctaccctaataataggcataatataggccaaccaacaatcgaagatcctgattacgatcatgtggggatcgacatcaactctgtcaagtctaatcttaccacggaatggagtggtggtatcattgaaggaaaacaaaatattgccacaattagctacaactccagctcaaaaaatcttagtgttgccttcactacttttgtagatcgttacaggaaagtacaggtgatcaaaaaaatttattgcttgattgatctgcttcaatacttgcccgatagggtcattgttggattctctgcttccacgggttatgcagttgctctgcataagatcattgcatggaattttacctccactcttctggaggatgataattcgacaaacaacaatcctctgcctagaaatagtgcgacgacgtccaacaacaacgtaggactagcagtcggattgggtgttggtggatgtgttaccttggttggtgcattggctttggtttggtacgtcttctgcaggaagaagaggggaacagctggggaaagtactactgatgatgatactttggatattcatgatttggttcctgatgaattcgaaaaggggataggccccaggaagttttcctacaatgaattggcccaagcaactaacaattttgaacaaggagaaaagcttggggaaggaggatttggccgagtttatagaggctgcatcaaagatttggactcatgtgttgctgttaagaagatatcccgagggtctaaacaagggttgaaggagtatgcagcagaagtcagtatcatcagtcggctgaggcatcggaatctagtgcaactaattggttggtgccacgaaaagaaactcctacttgtctacgaatatatgcccaacggaagcttagatgctcatctgttcaaagaagaaagcatgtttacttgggaggtaaggtacaaaattgcaaatggattggccgcaggattgctctatcttcaccaagaatgggtacagtgtgtgctgcacagggatatcaaatccagcaatgttatgttggactcgaatttcaatgccaaacttggagattttgggttagctcgacttgtagaccatggaacaatgtctcaaactacgattgtagcaggaacaatgggctacatggctatggaatatgttacaacgggaaaggctagcaaggaaacagatgtctatagtttcggagttgttgctttggaaatagcttgtg

Protein Analysis

569

Amino Acids

62.88

Weight (kDa)

5.88

Isoelectric Point (pI)

24.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 890
AccB1I GGYRCC 1 cut(s) 1314
AccB7I CCANNNNNTGG 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 40
AccI GTMKAC 2 cut(s) 1341, 1569
AciI CCGC 4 cut(s) 40, 120, 327, 1440
AclWI GGATC 2 cut(s) 512, 548
AcoI YGGCCR 2 cut(s) 1159, 1437
AcsI RAATTY 5 cut(s) 431, 708, 814, 1058, 1525
AcuI CTGAAG 1 cut(s) 29
AcyI GRCGYC 1 cut(s) 887
AfaI GTAC 6 cut(s) 446, 693, 971, 1012, 1418, 1473
AfiI CCNNNNNNNGG 4 cut(s) 129, 326, 579, 1468
AgeI ACCGGT 1 cut(s) 218
AgsI TTSAA 8 cut(s) 103, 285, 599, 734, 1127, 1243, 1384, 1531
AhdI GACNNNNNGTC 2 cut(s) 410, 911
AjnI CCWGG 3 cut(s) 128, 375, 1079
AjuI GAANNNNNNNTTGG 2 cut(s) 1140, 1172
AluBI AGCT 9 cut(s) 114, 272, 627, 639, 1001, 1141, 1365, 1559, 1703
AluI AGCT 9 cut(s) 114, 272, 627, 639, 1001, 1141, 1365, 1559, 1703
Alw21I GWGCWC 2 cut(s) 193, 218
Alw26I GTCTC 1 cut(s) 1590
AlwI GGATC 2 cut(s) 512, 548
Ama87I CYCGRG 1 cut(s) 1221
AoxI GGCC 6 cut(s) 378, 499, 1075, 1104, 1159, 1437
ApeKI GCWGC 5 cut(s) 393, 424, 1176, 1253, 1483
ApoI RAATTY 5 cut(s) 431, 708, 814, 1058, 1525
AsiGI ACCGGT 1 cut(s) 218
AspS9I GGNCC 2 cut(s) 1076, 1105
AsuHPI GGTGA 7 cut(s) 24, 151, 172, 248, 341, 709, 1451
AsuII TTCGAA 1 cut(s) 1062
AsuNHI GCTAGC 1 cut(s) 1652
AvaI CYCGRG 1 cut(s) 1221
BanI GGYRCC 1 cut(s) 1314
BarI GAAGNNNNNNTAC 2 cut(s) 1076, 1108
BbsI GAAGAC 1 cut(s) 967
Bbv12I GWGCWC 2 cut(s) 193, 218
BbvCI CCTCAGC 1 cut(s) 1280
BbvI GCAGC 5 cut(s) 405, 411, 1163, 1265, 1470
BceAI ACGGC 2 cut(s) 181, 349
BciT130I CCWGG 3 cut(s) 130, 377, 1081
BclI TGATCA 1 cut(s) 699
BcoDI GTCTC 1 cut(s) 1590
BfaI CTAG 7 cut(s) 143, 269, 441, 870, 908, 1295, 1653
BfmI CTRYAG 2 cut(s) 979, 1672
BisI GCNGC 7 cut(s) 41, 394, 425, 1177, 1254, 1440, 1484
BlsI GCNGC 7 cut(s) 42, 395, 426, 1178, 1255, 1441, 1485
BmcAI AGTACT 1 cut(s) 1012
Bme1390I CCNGG 3 cut(s) 130, 377, 1081
BmeRI GACNNNNNGTC 2 cut(s) 410, 911
BmeT110I CYCGRG 1 cut(s) 1221
BmgT120I GGNCC 2 cut(s) 1076, 1105
BmiI GGNNCC 5 cut(s) 169, 364, 1050, 1078, 1316
BmrFI CCNGG 3 cut(s) 130, 377, 1081
BmsI GCATC 4 cut(s) 142, 1188, 1294, 1360
BmtI GCTAGC 1 cut(s) 1656
BpiI GAAGAC 1 cut(s) 967
BpmI CTGGAG 5 cut(s) 8, 94, 232, 619, 854
Bpu10I CCTNAGC 1 cut(s) 1280
Bpu14I TTCGAA 1 cut(s) 1062
BsaBI GATNNNNATC 3 cut(s) 528, 545, 1374
BsaHI GRCGYC 1 cut(s) 887
BsaJI CCNNGG 6 cut(s) 573, 774, 942, 1079, 1222, 1573
BsaWI WCCGGW 1 cut(s) 218
BsaXI ACNNNNNCTCC 8 cut(s) 205, 235, 390, 420, 574, 604, 1400, 1430
Bsc4I CCNNNNNNNGG 4 cut(s) 129, 326, 579, 1468
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 2 cut(s) 25, 215
Bse3DI GCAATG 2 cut(s) 804, 1513
Bse8I GATNNNNATC 3 cut(s) 528, 545, 1374
BseBI CCWGG 3 cut(s) 130, 377, 1081
BseDI CCNNGG 6 cut(s) 573, 774, 942, 1079, 1222, 1573
BseGI GGATG 2 cut(s) 844, 938
BseJI GATNNNNATC 3 cut(s) 528, 545, 1374
BseLI CCNNNNNNNGG 4 cut(s) 129, 326, 579, 1468
BseMI GCAATG 2 cut(s) 804, 1513
BseMII CTCAG 1 cut(s) 1271
BseNI ACTGG 2 cut(s) 25, 215
BseRI GAGGAG 1 cut(s) 239
BseXI GCAGC 5 cut(s) 405, 411, 1163, 1265, 1470
BseYI CCCAGC 1 cut(s) 1001
BsgI GTGCAG 1 cut(s) 1469
BshFI GGCC 6 cut(s) 380, 501, 1077, 1106, 1161, 1439
BshNI GGYRCC 1 cut(s) 1314
BshTI ACCGGT 1 cut(s) 218
BsiHKAI GWGCWC 2 cut(s) 193, 218
BsiHKCI CYCGRG 1 cut(s) 1221
BsiSI CCGG 2 cut(s) 219, 253
BslI CCNNNNNNNGG 4 cut(s) 129, 326, 579, 1468
BsmAI GTCTC 1 cut(s) 1590
BsnI GGCC 6 cut(s) 380, 501, 1077, 1106, 1161, 1439
BsoBI CYCGRG 1 cut(s) 1221
Bsp119I TTCGAA 1 cut(s) 1062
Bsp1286I GDGCHC 2 cut(s) 193, 218
Bsp143I GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
Bsp19I CCATGG 1 cut(s) 1573
BspACI CCGC 4 cut(s) 40, 120, 327, 1440
BspANI GGCC 6 cut(s) 380, 501, 1077, 1106, 1161, 1439
BspCNI CTCAG 1 cut(s) 1272
BspHI TCATGA 1 cut(s) 1039
BspLI GGNNCC 5 cut(s) 169, 364, 1050, 1078, 1316
BspMAI CTGCAG 1 cut(s) 983
BspOI GCTAGC 1 cut(s) 1656
BspPI GGATC 2 cut(s) 512, 548
BspT104I TTCGAA 1 cut(s) 1062
BspT107I GGYRCC 1 cut(s) 1314
BsrBI CCGCTC 1 cut(s) 40
BsrDI GCAATG 2 cut(s) 804, 1513
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 2 cut(s) 25, 215
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 6 cut(s) 573, 774, 942, 1079, 1222, 1573
BssMI GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
BssNI GRCGYC 1 cut(s) 887
BssT1I CCWWGG 2 cut(s) 942, 1573
Bst2UI CCWGG 3 cut(s) 130, 377, 1081
Bst4CI ACNGT 1 cut(s) 1476
Bst6I CTCTTC 2 cut(s) 834, 983
BstACI GRCGYC 1 cut(s) 887
BstBI TTCGAA 1 cut(s) 1062
BstC8I GCNNGC 1 cut(s) 1654
BstDEI CTNAG 4 cut(s) 382, 650, 1280, 1366
BstDSI CCRYGG 3 cut(s) 573, 774, 1573
BstF5I GGATG 2 cut(s) 844, 938
BstKTI GATC 7 cut(s) 520, 532, 543, 679, 702, 727, 804
BstMAI GTCTC 1 cut(s) 1590
BstMBI GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
BstMWI GCNNNNNNNGC 1 cut(s) 333
BstNI CCWGG 3 cut(s) 130, 377, 1081
BstNSI RCATGY 1 cut(s) 1399
BstSCI CCNGG 3 cut(s) 128, 375, 1079
BstSFI CTRYAG 2 cut(s) 979, 1672
BstV1I GCAGC 5 cut(s) 405, 411, 1163, 1265, 1470
BstV2I GAAGAC 1 cut(s) 967
BstX2I RGATCY 1 cut(s) 517
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 1 cut(s) 517
BsuRI GGCC 6 cut(s) 380, 501, 1077, 1106, 1161, 1439
BtgI CCRYGG 3 cut(s) 573, 774, 1573
BtsCI GGATG 2 cut(s) 844, 938
BtsIMutI CAGTG 1 cut(s) 1481
Cac8I GCNNGC 1 cut(s) 1654
CciI TCATGA 1 cut(s) 1039
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 2 cut(s) 1076, 1105
CseI GACGC 1 cut(s) 209
Csp6I GTAC 6 cut(s) 445, 692, 970, 1011, 1417, 1472
CspAI ACCGGT 1 cut(s) 218
CviAII CATG 7 cut(s) 533, 810, 1040, 1197, 1396, 1574, 1621
CviQI GTAC 6 cut(s) 445, 692, 970, 1011, 1417, 1472
DdeI CTNAG 4 cut(s) 382, 650, 1280, 1366
DpnI GATC 7 cut(s) 519, 531, 542, 678, 701, 726, 803
DpnII GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
DriI GACNNNNNGTC 2 cut(s) 410, 911
EaeI YGGCCR 2 cut(s) 1159, 1437
Eam1104I CTCTTC 2 cut(s) 834, 983
Eam1105I GACNNNNNGTC 2 cut(s) 410, 911
EarI CTCTTC 2 cut(s) 834, 983
Eco130I CCWWGG 2 cut(s) 942, 1573
Eco147I AGGCCT 1 cut(s) 380
Eco32I GATATC 3 cut(s) 472, 1218, 1495
Eco57I CTGAAG 1 cut(s) 29
Eco88I CYCGRG 1 cut(s) 1221
EcoO109I RGGNCCY 1 cut(s) 1076
EcoRI GAATTC 1 cut(s) 1058
EcoRII CCWGG 3 cut(s) 128, 375, 1079
EcoRV GATATC 3 cut(s) 472, 1218, 1495
EcoT14I CCWWGG 2 cut(s) 942, 1573
ErhI CCWWGG 2 cut(s) 942, 1573
FaeI CATG 7 cut(s) 536, 813, 1043, 1200, 1399, 1577, 1624
FatI CATG 7 cut(s) 532, 809, 1039, 1196, 1395, 1573, 1620
FauI CCCGC 1 cut(s) 127
FbaI TGATCA 1 cut(s) 699
FblI GTMKAC 2 cut(s) 1341, 1569
Fnu4HI GCNGC 7 cut(s) 41, 394, 425, 1177, 1254, 1440, 1484
FokI GGATG 2 cut(s) 851, 945
Fsp4HI GCNGC 7 cut(s) 41, 394, 425, 1177, 1254, 1440, 1484
FspBI CTAG 7 cut(s) 143, 269, 441, 870, 908, 1295, 1653
GluI GCNGC 7 cut(s) 41, 394, 425, 1177, 1254, 1440, 1484
GsaI CCCAGC 1 cut(s) 1005
GsuI CTGGAG 5 cut(s) 8, 94, 232, 619, 854
HaeIII GGCC 6 cut(s) 380, 501, 1077, 1106, 1161, 1439
HapII CCGG 2 cut(s) 219, 253
HgaI GACGC 1 cut(s) 209
Hin1I GRCGYC 1 cut(s) 887
Hin1II CATG 7 cut(s) 536, 813, 1043, 1200, 1399, 1577, 1624
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HindIII AAGCTT 2 cut(s) 1139, 1363
HinfI GANTC 8 cut(s) 133, 177, 239, 405, 762, 1193, 1291, 1520
HpaII CCGG 2 cut(s) 219, 253
HphI GGTGA 7 cut(s) 24, 151, 172, 248, 341, 709, 1451
Hpy166II GTNNAC 4 cut(s) 415, 1342, 1401, 1570
Hpy188I TCNGA 4 cut(s) 176, 917, 1290, 1682
Hpy188III TCNNGA 7 cut(s) 143, 194, 521, 833, 1040, 1052, 1221
Hpy8I GTNNAC 4 cut(s) 415, 1342, 1401, 1570
Hpy99I CGWCG 3 cut(s) 167, 886, 889
HpyAV CCTTC 6 cut(s) 62, 241, 593, 670, 1142, 1237
HpyCH4III ACNGT 1 cut(s) 1476
HpyCH4IV ACGT 3 cut(s) 887, 900, 972
HpyF10VI GCNNNNNNNGC 1 cut(s) 333
HpyF3I CTNAG 4 cut(s) 382, 650, 1280, 1366
HpySE526I ACGT 3 cut(s) 887, 900, 972
Hsp92I GRCGYC 1 cut(s) 887
Hsp92II CATG 7 cut(s) 536, 813, 1043, 1200, 1399, 1577, 1624
Ksp22I TGATCA 1 cut(s) 699
Kzo9I GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
LmnI GCTCC 4 cut(s) 173, 213, 358, 368
Lsp1109I GCAGC 5 cut(s) 405, 411, 1163, 1265, 1470
LweI GCATC 4 cut(s) 142, 1188, 1294, 1360
MaeI CTAG 7 cut(s) 143, 269, 441, 870, 908, 1295, 1653
MaeII ACGT 3 cut(s) 887, 900, 972
MaeIII GTNAC 4 cut(s) 329, 680, 937, 1636
MalI GATC 7 cut(s) 519, 531, 542, 678, 701, 726, 803
MbiI CCGCTC 1 cut(s) 40
MboI GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
MflI RGATCY 1 cut(s) 517
MhlI GDGCHC 2 cut(s) 193, 218
MlyI GAGTC 5 cut(s) 127, 171, 399, 1187, 1514
MmeI TCCRAC 5 cut(s) 199, 739, 895, 915, 1497
MseI TTAA 2 cut(s) 74, 1209
MslI CAYNNNNRTG 1 cut(s) 1625
MspA1I CMGCKG 1 cut(s) 1001
MspI CCGG 2 cut(s) 219, 253
MspR9I CCNGG 3 cut(s) 130, 377, 1081
MvaI CCWGG 3 cut(s) 130, 377, 1081
MwoI GCNNNNNNNGC 1 cut(s) 333
NcoI CCATGG 1 cut(s) 1573
NdeII GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
NheI GCTAGC 1 cut(s) 1652
NlaIII CATG 7 cut(s) 536, 813, 1043, 1200, 1399, 1577, 1624
NlaIV GGNNCC 5 cut(s) 169, 364, 1050, 1078, 1316
NmeAIII GCCGAG 1 cut(s) 1187
NmuCI GTSAC 1 cut(s) 329
NspI RCATGY 1 cut(s) 1399
NspV TTCGAA 1 cut(s) 1062
PagI TCATGA 1 cut(s) 1039
PceI AGGCCT 1 cut(s) 380
PfeI GAWTC 3 cut(s) 239, 762, 1291
PflFI GACNNNGTC 1 cut(s) 886
PflMI CCANNNNNTGG 1 cut(s) 579
PinAI ACCGGT 1 cut(s) 218
PkrI GCNGC 7 cut(s) 42, 395, 426, 1178, 1255, 1441, 1485
PleI GAGTC 5 cut(s) 127, 171, 399, 1187, 1514
PpsI GAGTC 5 cut(s) 127, 171, 399, 1187, 1514
Psp6I CCWGG 3 cut(s) 128, 375, 1079
PspFI CCCAGC 1 cut(s) 1001
PspGI CCWGG 3 cut(s) 128, 375, 1079
PspN4I GGNNCC 5 cut(s) 169, 364, 1050, 1078, 1316
PspPI GGNCC 2 cut(s) 1076, 1105
PstI CTGCAG 1 cut(s) 983
PsuI RGATCY 1 cut(s) 517
PsyI GACNNNGTC 1 cut(s) 886
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 6 cut(s) 446, 693, 971, 1012, 1418, 1473
RsaNI GTAC 6 cut(s) 445, 692, 970, 1011, 1417, 1472
RseI CAYNNNNRTG 1 cut(s) 1625
SaqAI TTAA 2 cut(s) 74, 1209
SatI GCNGC 7 cut(s) 41, 394, 425, 1177, 1254, 1440, 1484
Sau3AI GATC 7 cut(s) 517, 529, 540, 676, 699, 724, 801
Sau96I GGNCC 2 cut(s) 1076, 1105
ScaI AGTACT 1 cut(s) 1012
SchI GAGTC 5 cut(s) 127, 171, 399, 1187, 1514
ScrFI CCNGG 3 cut(s) 130, 377, 1081
SduI GDGCHC 2 cut(s) 193, 218
SfaNI GCATC 4 cut(s) 142, 1188, 1294, 1360
SfcI CTRYAG 2 cut(s) 979, 1672
SfuI TTCGAA 1 cut(s) 1062
SmiMI CAYNNNNRTG 1 cut(s) 1625
SseBI AGGCCT 1 cut(s) 380
SsiI CCGC 4 cut(s) 40, 120, 327, 1440
SspI AATATT 1 cut(s) 613
SspMI CTAG 7 cut(s) 143, 269, 441, 870, 908, 1295, 1653
StuI AGGCCT 1 cut(s) 380
StyD4I CCNGG 3 cut(s) 128, 375, 1079
StyI CCWWGG 2 cut(s) 942, 1573
TaaI ACNGT 1 cut(s) 1476
TaiI ACGT 3 cut(s) 890, 903, 975
TaqI TCGA 8 cut(s) 372, 462, 513, 543, 848, 1062, 1523, 1561
TatI WGTACW 2 cut(s) 691, 1010
TauI GCSGC 2 cut(s) 43, 1442
TfiI GAWTC 3 cut(s) 239, 762, 1291
Tru1I TTAA 2 cut(s) 74, 1209
Tru9I TTAA 2 cut(s) 74, 1209
TscAI CASTG 1 cut(s) 1481
TseFI GTSAC 1 cut(s) 329
TseI GCWGC 5 cut(s) 393, 424, 1176, 1253, 1483
Tsp45I GTSAC 1 cut(s) 329
TspDTI ATGAA 5 cut(s) 276, 280, 1028, 1071, 1113
TspGWI ACGGA 2 cut(s) 590, 1374
TspRI CASTG 1 cut(s) 1481
Tth111I GACNNNGTC 1 cut(s) 886
Van91I CCANNNNNTGG 1 cut(s) 579
XapI RAATTY 5 cut(s) 431, 708, 814, 1058, 1525
XbaI TCTAGA 1 cut(s) 142
XceI RCATGY 1 cut(s) 1399
XmiI GTMKAC 2 cut(s) 1341, 1569
XspI CTAG 7 cut(s) 143, 269, 441, 870, 908, 1295, 1653
ZraI GACGTC 1 cut(s) 888
ZrmI AGTACT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.