RLG00000028035

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
17904838 .. 17906601
1764 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028035

Sequence Viewer

Length: 1764 bp
ATGTCTAAAAGCAGAAGCAGCAGTACGCAAGCAATATGCTTGTGCAATATTTGCATCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAATATAGATCAGTTTGACGCTAGTAGAGATGAAATTGTCTATGAAGGTGAGGCTCGCCCTTCATCGGGAATGCTTGAGGTCAACGCAAGCAATTTATTTGGTGCTGGACATGCTACTTATGCAGAGCCTTTGCACCTATGGGACGCTGCTACTAGGTCACTGGCAGACTTCACTACTCATTTCACTTTCGTGGTTGACTATAGTTCTACTCATGATGGGGACTTTAGCGATGGAATTGCCTTTTTCCTTGCTCCTGTTGGCTACCATATTCCACCCAACTCTAGCGGTGCTGAACTGGGATTATTCAACTCCACCACCAATAATAATGCCTTGTCCAAAAACCACATTGTAGCCGTAGAGTTCGACACTTGGGAAAACGAATGGGATCCAGCCGGGCCGCATATTGGTATCAACATCAATGAAATCTCTTCAGTTATGTACGCCAATTGGAATGCAAGTAACAGCATCGGGAAGCTTGGTAATGCATGGATAACTTACAACGCTACTACCAACAACCTTAGTGTGTTTTGGACATTTAAGGGAAACACAAACCCCGTTTTTGGGGGCAATACTACTTCTTCTCTTACTTACCATGTTGACTTGCGAAATATTCTCCCCGAAAGGGTTACAATCGGTTTTTCTGCTTCAACTGGAATATACATTGCTCGGCATGTTTTATGTTCATGGGCGTTTAATTCGACTTTGGTGGATAACGATATTAGAAGAGCCGAAAAGAAGAAAAAGATATTCTTGATACTAGTCATTGCAGTTCCTGGCTTCATTTTGACGCTTGGTGTAGTCATATGTTGGATGGTGGTATTAAGGAAGAGGAGAAACAATTACTCCGGCGAAGTCTCTGATCCTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCACACGATAGAAGGCTAGGCAAAGGAGGGTCGGGCCAAGTATATAAAGGACTCATACAAGACCTTGGAGGCTGCATAGTTGCCGTGAAGAGAATCTTTGCAGAACCTGATCAGCATTATGAGAGAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAACAAGGCGAATGCTTACTTGTTTATGCATATATGCCTAACAACAGCCTTGACACCCATCTATTTGGCACCAGAACAACCCTGCAATGGCAAAACAGGTACAAGATAGCTTTGGGGTTGGCCTCAGCCATTCACTATCTACATGAAGATGCAGAGCAGTGTGTACTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGATGATGACTTCAGCACTACGCTTGGTGATTTTGGTATTGCTAAGCTTGTGGATCCCCGCTTGAGGTCTCAGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCTCCGGAATATGCTATTGAAGGGAGGGCTAGTAAGGAATCTGATATGTATAGTTTTGGAGTTGTAGCCTTGGAAATTGCCTGTGGAAGGAAGACTTACCAAGACGGTGAACATCACATGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAAGAAATGTTCTGGATGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

588

Amino Acids

65.95

Weight (kDa)

6.16

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 278 2e-66 Legume lectin domain
Lectin_L-type_dom PF18483 92 - 262 2.1e-06 Legume lectin beta-barrel domain
Pkinase PF00069 347 - 552 6.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 348 - 550 4.1e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1304
AccIII TCCGGA 1 cut(s) 1546
AciI CCGC 4 cut(s) 393, 506, 1192, 1495
AclWI GGATC 5 cut(s) 488, 501, 962, 1484, 1497
AcuI CTGAAG 2 cut(s) 522, 1432
AfaI GTAC 5 cut(s) 25, 548, 1337, 1401, 1431
AgsI TTSAA 4 cut(s) 109, 415, 756, 1562
AhlI ACTAGT 1 cut(s) 865
AjnI CCWGG 2 cut(s) 880, 1209
AleI CACNNNNGTG 1 cut(s) 296
AluBI AGCT 6 cut(s) 583, 979, 1346, 1424, 1483, 1718
AluI AGCT 6 cut(s) 583, 979, 1346, 1424, 1483, 1718
Alw26I GTCTC 2 cut(s) 967, 1509
AlwI GGATC 5 cut(s) 488, 501, 962, 1484, 1497
AlwNI CAGNNNCTG 2 cut(s) 881, 1142
Aor13HI TCCGGA 1 cut(s) 1546
AoxI GGCC 3 cut(s) 503, 1069, 1356
ApeKI GCWGC 5 cut(s) 18, 254, 1019, 1107, 1715
AspS9I GGNCC 2 cut(s) 503, 1069
AsuC2I CCSGG 1 cut(s) 502
AsuHPI GGTGA 3 cut(s) 167, 1475, 1661
AsuNHI GCTAGC 1 cut(s) 979
BamHI GGATCC 2 cut(s) 493, 1489
BanI GGYRCC 1 cut(s) 1304
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BbsI GAAGAC 2 cut(s) 1156, 1640
BbvCI CCTCAGC 1 cut(s) 1360
BbvI GCAGC 5 cut(s) 30, 241, 1006, 1094, 1727
BccI CCATC 5 cut(s) 317, 332, 913, 1209, 1302
BceAI ACGGC 2 cut(s) 446, 1103
BcgI CGANNNNNNTGC 2 cut(s) 326, 360
BciT130I CCWGG 2 cut(s) 882, 1211
BciVI GTATCC 1 cut(s) 1529
BclI TGATCA 1 cut(s) 1144
BcnI CCSGG 1 cut(s) 502
BcoDI GTCTC 2 cut(s) 967, 1509
BcuI ACTAGT 1 cut(s) 865
BfaI CTAG 7 cut(s) 129, 261, 390, 866, 980, 1052, 1572
BfmI CTRYAG 1 cut(s) 307
BfuI GTATCC 1 cut(s) 1529
BisI GCNGC 7 cut(s) 19, 255, 506, 1020, 1108, 1192, 1716
BlpI GCTNAGC 1 cut(s) 1479
BlsI GCNGC 7 cut(s) 20, 256, 507, 1021, 1109, 1193, 1717
Bme1390I CCNGG 3 cut(s) 502, 882, 1211
BmgT120I GGNCC 2 cut(s) 503, 1069
BmiI GGNNCC 4 cut(s) 495, 1306, 1491, 1545
BmrFI CCNGG 3 cut(s) 502, 882, 1211
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 4 cut(s) 63, 582, 1375, 1702
BmtI GCTAGC 1 cut(s) 983
BmuI ACTGGG 1 cut(s) 413
BpiI GAAGAC 2 cut(s) 1156, 1640
Bpu10I CCTNAGC 1 cut(s) 1360
Bpu1102I GCTNAGC 1 cut(s) 1479
BpuEI CTTGAG 2 cut(s) 203, 1519
BpuMI CCSGG 1 cut(s) 502
BsaI GGTCTC 1 cut(s) 1509
BsaJI CCNNGG 2 cut(s) 1099, 1611
BsaWI WCCGGW 1 cut(s) 1546
BsaXI ACNNNNNCTCC 4 cut(s) 935, 965, 1558, 1588
Bse1I ACTGG 3 cut(s) 273, 408, 763
Bse3DI GCAATG 3 cut(s) 768, 870, 1328
BseAI TCCGGA 1 cut(s) 1546
BseBI CCWGG 2 cut(s) 882, 1211
BseDI CCNNGG 2 cut(s) 1099, 1611
BseGI GGATG 5 cut(s) 54, 94, 924, 1444, 1717
BseMI GCAATG 3 cut(s) 768, 870, 1328
BseMII CTCAG 3 cut(s) 963, 1374, 1520
BseNI ACTGG 3 cut(s) 273, 408, 763
BseRI GAGGAG 1 cut(s) 952
BseXI GCAGC 5 cut(s) 30, 241, 1006, 1094, 1727
BsgI GTGCAG 1 cut(s) 1235
BshFI GGCC 3 cut(s) 505, 1071, 1358
BshNI GGYRCC 1 cut(s) 1304
BsiSI CCGG 3 cut(s) 501, 954, 1547
BslFI GGGAC 3 cut(s) 263, 341, 1540
BsmAI GTCTC 2 cut(s) 967, 1509
BsmFI GGGAC 3 cut(s) 263, 341, 1540
BsmI GAATGC 3 cut(s) 183, 565, 1253
BsnI GGCC 3 cut(s) 505, 1071, 1358
Bso31I GGTCTC 1 cut(s) 1509
Bsp13I TCCGGA 1 cut(s) 1546
Bsp143I GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
Bsp1720I GCTNAGC 1 cut(s) 1479
BspACI CCGC 4 cut(s) 393, 506, 1192, 1495
BspANI GGCC 3 cut(s) 505, 1071, 1358
BspCNI CTCAG 3 cut(s) 964, 1373, 1519
BspEI TCCGGA 1 cut(s) 1546
BspHI TCATGA 2 cut(s) 319, 1234
BspLI GGNNCC 4 cut(s) 495, 1306, 1491, 1545
BspOI GCTAGC 1 cut(s) 983
BspPI GGATC 5 cut(s) 488, 501, 962, 1484, 1497
BspQI GCTCTTC 1 cut(s) 826
BspT107I GGYRCC 1 cut(s) 1304
BspTNI GGTCTC 1 cut(s) 1509
BsrDI GCAATG 3 cut(s) 768, 870, 1328
BsrI ACTGG 3 cut(s) 273, 408, 763
BssECI CCNNGG 2 cut(s) 1099, 1611
BssMI GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
BssT1I CCWWGG 2 cut(s) 1099, 1611
Bst2UI CCWGG 2 cut(s) 882, 1211
Bst4CI ACNGT 2 cut(s) 1434, 1649
Bst6I CTCTTC 4 cut(s) 541, 826, 929, 1118
BstAPI GCANNNNNTGC 1 cut(s) 51
BstC8I GCNNGC 4 cut(s) 30, 163, 196, 981
BstDEI CTNAG 5 cut(s) 626, 972, 1360, 1479, 1506
BstENI CCTNNNNNAGG 1 cut(s) 1627
BstF5I GGATG 5 cut(s) 54, 94, 924, 1444, 1717
BstKTI GATC 6 cut(s) 118, 496, 970, 1147, 1492, 1747
BstMAI GTCTC 2 cut(s) 967, 1509
BstMBI GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
BstMWI GCNNNNNNNGC 4 cut(s) 18, 51, 218, 227
BstNI CCWGG 2 cut(s) 882, 1211
BstNSI RCATGY 3 cut(s) 221, 782, 1663
BstSCI CCNGG 3 cut(s) 500, 880, 1209
BstSFI CTRYAG 1 cut(s) 307
BstV1I GCAGC 5 cut(s) 30, 241, 1006, 1094, 1727
BstV2I GAAGAC 2 cut(s) 1156, 1640
BstX2I RGATCY 2 cut(s) 493, 1489
BstXI CCANNNNNNTGG 1 cut(s) 1301
BstYI RGATCY 2 cut(s) 493, 1489
BsuI GTATCC 1 cut(s) 1529
BsuRI GGCC 3 cut(s) 505, 1071, 1358
BtgZI GCGATG 1 cut(s) 351
BtsCI GGATG 5 cut(s) 54, 94, 924, 1444, 1717
BtsI GCAGTG 1 cut(s) 1400
BtsIMutI CAGTG 2 cut(s) 266, 1400
Cac8I GCNNGC 4 cut(s) 30, 163, 196, 981
CaiI CAGNNNCTG 2 cut(s) 881, 1142
CciI TCATGA 2 cut(s) 319, 1234
Cfr13I GGNCC 2 cut(s) 503, 1069
CseI GACGC 3 cut(s) 134, 260, 904
CsiI ACCWGGT 1 cut(s) 1209
Csp6I GTAC 5 cut(s) 24, 547, 1336, 1400, 1430
CspCI CAANNNNNGTGG 2 cut(s) 1500, 1535
CviQI GTAC 5 cut(s) 24, 547, 1336, 1400, 1430
DdeI CTNAG 5 cut(s) 626, 972, 1360, 1479, 1506
DpnI GATC 6 cut(s) 117, 495, 969, 1146, 1491, 1746
DpnII GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
Eam1104I CTCTTC 4 cut(s) 541, 826, 929, 1118
EarI CTCTTC 4 cut(s) 541, 826, 929, 1118
Eco130I CCWWGG 2 cut(s) 1099, 1611
Eco31I GGTCTC 1 cut(s) 1509
Eco32I GATATC 1 cut(s) 1414
Eco57I CTGAAG 2 cut(s) 522, 1432
EcoNI CCTNNNNNAGG 1 cut(s) 1627
EcoRII CCWGG 2 cut(s) 880, 1209
EcoRV GATATC 1 cut(s) 1414
EcoT14I CCWWGG 2 cut(s) 1099, 1611
EcoT22I ATGCAT 2 cut(s) 595, 1267
ErhI CCWWGG 2 cut(s) 1099, 1611
FalI AAGNNNNNCTT 8 cut(s) 842, 874, 968, 1000, 1115, 1147, 1621, 1653
FaqI GGGAC 3 cut(s) 263, 341, 1540
FauI CCCGC 1 cut(s) 1502
FauNDI CATATG 1 cut(s) 911
FbaI TGATCA 1 cut(s) 1144
Fnu4HI GCNGC 7 cut(s) 19, 255, 506, 1020, 1108, 1192, 1716
FokI GGATG 5 cut(s) 41, 81, 931, 1451, 1724
Fsp4HI GCNGC 7 cut(s) 19, 255, 506, 1020, 1108, 1192, 1716
FspBI CTAG 7 cut(s) 129, 261, 390, 866, 980, 1052, 1572
GluI GCNGC 7 cut(s) 19, 255, 506, 1020, 1108, 1192, 1716
HaeIII GGCC 3 cut(s) 505, 1071, 1358
HapII CCGG 3 cut(s) 501, 954, 1547
HgaI GACGC 3 cut(s) 134, 260, 904
HincII GTYRAC 3 cut(s) 190, 304, 706
HindII GTYRAC 3 cut(s) 190, 304, 706
HindIII AAGCTT 2 cut(s) 581, 1481
HinfI GANTC 4 cut(s) 1086, 1128, 1161, 1580
HpaII CCGG 3 cut(s) 501, 954, 1547
HphI GGTGA 3 cut(s) 167, 1475, 1661
Hpy166II GTNNAC 5 cut(s) 190, 304, 706, 1400, 1652
Hpy188I TCNGA 3 cut(s) 967, 1509, 1585
Hpy188III TCNNGA 8 cut(s) 174, 320, 577, 859, 971, 1235, 1547, 1709
Hpy8I GTNNAC 5 cut(s) 190, 304, 706, 1400, 1652
HpyAV CCTTC 6 cut(s) 115, 146, 177, 1041, 1556, 1623
HpyCH4III ACNGT 2 cut(s) 1434, 1649
HpyCH4IV ACGT 1 cut(s) 1428
HpyF10VI GCNNNNNNNGC 4 cut(s) 18, 51, 218, 227
HpyF3I CTNAG 5 cut(s) 626, 972, 1360, 1479, 1506
HpySE526I ACGT 1 cut(s) 1428
Kpn2I TCCGGA 1 cut(s) 1546
Ksp22I TGATCA 1 cut(s) 1144
Kzo9I GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
LguI GCTCTTC 1 cut(s) 826
LmnI GCTCC 2 cut(s) 364, 1549
Lsp1109I GCAGC 5 cut(s) 30, 241, 1006, 1094, 1727
LweI GCATC 4 cut(s) 63, 582, 1375, 1702
MabI ACCWGGT 1 cut(s) 1209
MaeI CTAG 7 cut(s) 129, 261, 390, 866, 980, 1052, 1572
MaeII ACGT 1 cut(s) 1428
MaeIII GTNAC 3 cut(s) 264, 566, 733
MalI GATC 6 cut(s) 117, 495, 969, 1146, 1491, 1746
MboI GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
MfeI CAATTG 1 cut(s) 553
MflI RGATCY 2 cut(s) 493, 1489
MlyI GAGTC 2 cut(s) 1080, 1170
MmeI TCCRAC 2 cut(s) 896, 1416
MnlI CCTC 9 cut(s) 151, 178, 930, 1055, 1097, 1369, 1494, 1508, 1560
Mph1103I ATGCAT 2 cut(s) 595, 1267
MroI TCCGGA 1 cut(s) 1546
MseI TTAA 4 cut(s) 645, 801, 929, 1196
MslI CAYNNNNRTG 2 cut(s) 296, 1383
MspA1I CMGCKG 1 cut(s) 1718
MspI CCGG 3 cut(s) 501, 954, 1547
MspR9I CCNGG 3 cut(s) 502, 882, 1211
MunI CAATTG 1 cut(s) 553
Mva1269I GAATGC 3 cut(s) 183, 565, 1253
MvaI CCWGG 2 cut(s) 882, 1211
MwoI GCNNNNNNNGC 4 cut(s) 18, 51, 218, 227
NciI CCSGG 1 cut(s) 502
NdeI CATATG 1 cut(s) 911
NdeII GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
NheI GCTAGC 1 cut(s) 979
NlaIV GGNNCC 4 cut(s) 495, 1306, 1491, 1545
NmeAIII GCCGAG 1 cut(s) 754
NmuCI GTSAC 1 cut(s) 264
NsiI ATGCAT 2 cut(s) 595, 1267
NspI RCATGY 3 cut(s) 221, 782, 1663
OliI CACNNNNGTG 1 cut(s) 296
PagI TCATGA 2 cut(s) 319, 1234
PciSI GCTCTTC 1 cut(s) 826
PctI GAATGC 3 cut(s) 183, 565, 1253
PfeI GAWTC 2 cut(s) 1128, 1580
PkrI GCNGC 7 cut(s) 20, 256, 507, 1021, 1109, 1193, 1717
PleI GAGTC 2 cut(s) 1080, 1169
PpsI GAGTC 2 cut(s) 1080, 1169
Psp6I CCWGG 2 cut(s) 880, 1209
PspGI CCWGG 2 cut(s) 880, 1209
PspN4I GGNNCC 4 cut(s) 495, 1306, 1491, 1545
PspPI GGNCC 2 cut(s) 503, 1069
PstNI CAGNNNCTG 2 cut(s) 881, 1142
PsuI RGATCY 2 cut(s) 493, 1489
PvuII CAGCTG 1 cut(s) 1718
RsaI GTAC 5 cut(s) 25, 548, 1337, 1401, 1431
RsaNI GTAC 5 cut(s) 24, 547, 1336, 1400, 1430
RseI CAYNNNNRTG 2 cut(s) 296, 1383
SapI GCTCTTC 1 cut(s) 826
SaqAI TTAA 4 cut(s) 645, 801, 929, 1196
SatI GCNGC 7 cut(s) 19, 255, 506, 1020, 1108, 1192, 1716
Sau3AI GATC 6 cut(s) 115, 493, 967, 1144, 1489, 1744
Sau96I GGNCC 2 cut(s) 503, 1069
SchI GAGTC 2 cut(s) 1080, 1170
ScrFI CCNGG 3 cut(s) 502, 882, 1211
SexAI ACCWGGT 1 cut(s) 1209
SfaNI GCATC 4 cut(s) 63, 582, 1375, 1702
SfcI CTRYAG 1 cut(s) 307
SmiMI CAYNNNNRTG 2 cut(s) 296, 1383
SmlI CTYRAG 2 cut(s) 182, 1498
SmoI CTYRAG 2 cut(s) 182, 1498
SpeI ACTAGT 1 cut(s) 865
SsiI CCGC 4 cut(s) 393, 506, 1192, 1495
SspI AATATT 2 cut(s) 49, 718
SspMI CTAG 7 cut(s) 129, 261, 390, 866, 980, 1052, 1572
StyD4I CCNGG 3 cut(s) 500, 880, 1209
StyI CCWWGG 2 cut(s) 1099, 1611
TaaI ACNGT 2 cut(s) 1434, 1649
TaiI ACGT 1 cut(s) 1431
TaqI TCGA 4 cut(s) 471, 806, 1204, 1747
TatI WGTACW 1 cut(s) 1399
TauI GCSGC 2 cut(s) 508, 1194
TfiI GAWTC 2 cut(s) 1128, 1580
Tru1I TTAA 4 cut(s) 645, 801, 929, 1196
Tru9I TTAA 4 cut(s) 645, 801, 929, 1196
TscAI CASTG 2 cut(s) 273, 1400
TseFI GTSAC 1 cut(s) 264
TseI GCWGC 5 cut(s) 18, 254, 1019, 1107, 1715
Tsp45I GTSAC 1 cut(s) 264
TspRI CASTG 2 cut(s) 273, 1400
XagI CCTNNNNNAGG 1 cut(s) 1627
XceI RCATGY 3 cut(s) 221, 782, 1663
XcmI CCANNNNNNNNNTGG 1 cut(s) 1671
XspI CTAG 7 cut(s) 129, 261, 390, 866, 980, 1052, 1572
Zsp2I ATGCAT 2 cut(s) 595, 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.