Rroxscaffold_1G00047970

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67947973 .. 67965044
17072 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047970.1

Sequence Viewer

Length: 2124 bp
ATGCTACCTTGGGGCGGTGAGTGGCGGCGCGTCGGCGGTGATCTTGGGGTGAGCGGGGCTCGGGCGATAGCTCTGCTTAGCCGTGTTCTCGTAGGTTACTTCTTTGGCGGGGCGGGACTTGGAAGAGGAGGCGAGTCCGCCGTGCTGGATTCCATCGTGGGTCCGCCGGAGAAGGAAGAATTCGGGGAAGAAGAAATCGGCCGAAGAGGAAGAAAGGGTCGGGGAAGAGGAGAGAGAAAAGCCGGCTTCAGTGCCGATGACATATTCGTCGAAGGAGATGCCGGCATCGACCCCCAATTCATCCGCCTCACCAAAAGCACTGCAGCACAAGTACAGAACGGGCGCAGCGTCGGTCGAGCCACCTACAGCAAACCAATCATGCTGCGAGAACCCGTCGATTTCACCACAGATTTTGTGTTCACCATTAGTCCTGCTAACAAGGAGAACTATGGCGATGGGCTCGCCTTCTTCATAGCAGCGAACGGATCCTTACTCGACGGCACAGTAGGATCTGGTAGCAGTCTAGGCCTCCCCGTCGATGACCAGCACCGGTTTCTGGCGGGGACGTTTGACATCAACTCCGGCAGCTACAGCCTGGGTATTAACCTCAACTCTGTCGATTCTAGCAACATCGCGCTGGTGGATGGTGTCACTATGGAAGGACAACAAAATAGTGGTACGATTACTTATGATTCTGGCTGGCTTAAAGTTTCGGTTTCAACTGCCTATGATTCTGGCACAAAATGGCGTAATCTTTCCAGGACTGTGAATCTGCAAGACTACTTTCCGGAGAGTGTGATCGTTGTTGGTTTCTCAGCTTCAACGGGCTCTGCATTCGCTCAGCATAAGATCATCTCGTGGAAGTTTACTTCAACTTCTGCTGCTCTTGTTCCTTCTAGCCCAACCCAAAAAAATGATTCTCTAGTTCCTTCTGGCCAAACAAACAAAACCGAATCTCAAGTGGTACCTCCTACTGCACCGGGCCCGAGTTCTAAAGCCGAGCCAAGAAAACACAGAATAACACGGGCGGTTGTGATCGCTTGTATTACTATTGGCGGAATTATCTTGCTTGGGTTGTTTGTTTGGTTCAAGTTGAGGAATAGGAAATCAGAAATAGATGAATGTTCATCTGAACAGCCTATGATTCGTGACCCGATTGATGTCCAATTTGAAAAGGAGACTGGCCCCAGGAAGTTTTCATACACAGAGTTGGCTTTGGCAACAAGCAATTTTGATGAGGAAAAGAAGCTTGGAGAGGGAGGATTTGGTGCGGTTTACAAAGGCGTCATAAATGACTTGAAGTTCGATGTTTCTGTAGATGTTGCTGTTAAGAAGATATCACCAGAATCTCGACAAGGCCTCAAGGAGTATATAGCAGAAGTACAGACAATTAGTGCACTTCGGCATCGACATCTGGTGCAACTCATCGGTTGGTGCCACGAAAAAGGAGAATTCCTACTTGTCTACAAGTTCATACCCAATGGAAGTTTAGACACCCATCTGTTTAAAGACACTAACATGTTAAGTTGGGAGAACCGATACAGAATTGTTAAAGAATTGGCCTCGGTGTTATTCTACCTGCAGGAACAATGCGGCGATCATCAATATGTGTTGCACAGGGATATCAAATCGAGCAACATCATGTTAGATTTGGATTTCACTGCGAAACTTGGGGATTTCGGTTTAGCTCAGCTTCTAGATCATGGACAACCTTTGAAAACAACACATGCTGCTGGAACTAGGGGTTACATGGCTCCGGAATACATTACCACCAAAGTGGCTACCAAGAAATCAGATGTCTACAGCTTTGGAATTGTTGCTTTGGAAATAGCATGTGGGAGGAGACCCAGCGTTGCCACGCCGGAAAATGGGAAATGCGATATAGTGGAGTGGGTTTGGGAACTCTATGGGGAACGTAAAATTCTTCAAGCAGCTGACCCAAAACTAAGTACACATTTTGATGAGAAACAAATGACGTGCTTGATGGTTGTTGGGTTATGGTGTGCTCATCCCGATTACAGCAATAGGGCTTCAATAGAACAGGCGATTGAAGTGCTCAACTTCACAGCTGAATTACCTCATCTCCCTCCAAAGATGCCAGTGGCAACCTTCCTTCCTGAATAA

Protein Analysis

707

Amino Acids

77.46

Weight (kDa)

6.12

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 83 - 295 4.5e-39 Legume lectin domain
Pkinase PF00069 412 - 684 1.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 414 - 620 1.9e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 266
Acc36I ACCTGC 1 cut(s) 1587
Acc65I GGTACC 1 cut(s) 964
AccB1I GGYRCC 2 cut(s) 964, 1434
AccBSI CCGCTC 1 cut(s) 54
AccI GTMKAC 2 cut(s) 1464, 1800
AccII CGCG 2 cut(s) 30, 635
AccIII TCCGGA 2 cut(s) 787, 1756
AclWI GGATC 3 cut(s) 480, 493, 517
AcoI YGGCCR 2 cut(s) 199, 934
AcsI RAATTY 3 cut(s) 179, 1451, 1920
AcuI CTGAAG 1 cut(s) 232
AcyI GRCGYC 1 cut(s) 1284
AfaI GTAC 5 cut(s) 333, 679, 966, 1383, 1951
AfiI CCNNNNNNNGG 3 cut(s) 14, 556, 1868
AflIII ACRYGT 1 cut(s) 1518
AgeI ACCGGT 1 cut(s) 549
AjiI CACGTC 1 cut(s) 1977
AjnI CCWGG 3 cut(s) 594, 758, 1187
AjuI GAANNNNNNNTTGG 2 cut(s) 1233, 1265
AleI CACNNNNGTG 1 cut(s) 1775
AluBI AGCT 9 cut(s) 71, 588, 818, 1249, 1688, 1693, 1806, 1934, 2069
AluI AGCT 9 cut(s) 71, 588, 818, 1249, 1688, 1693, 1806, 1934, 2069
Alw21I GWGCWC 3 cut(s) 1399, 2008, 2058
Alw26I GTCTC 2 cut(s) 1172, 1837
Alw44I GTGCAC 1 cut(s) 1395
AlwI GGATC 3 cut(s) 480, 493, 517
Ama87I CYCGRG 2 cut(s) 60, 985
Aor13HI TCCGGA 2 cut(s) 787, 1756
AoxI GGCC 7 cut(s) 199, 526, 934, 982, 1183, 1357, 1560
ApaI GGGCCC 1 cut(s) 986
ApaLI GTGCAC 1 cut(s) 1395
ApeKI GCWGC 8 cut(s) 323, 345, 382, 476, 585, 881, 1730, 1931
ApoI RAATTY 3 cut(s) 179, 1451, 1920
ArsI GACNNNNNNTTYG 2 cut(s) 1286, 1318
AsiGI ACCGGT 1 cut(s) 549
Asp718I GGTACC 1 cut(s) 964
AspLEI GCGC 3 cut(s) 30, 345, 637
AspS9I GGNCC 4 cut(s) 161, 982, 983, 1184
AsuC2I CCSGG 1 cut(s) 981
AsuHPI GGTGA 7 cut(s) 29, 50, 61, 301, 394, 412, 1332
AvaI CYCGRG 2 cut(s) 60, 985
AvaII GGWCC 1 cut(s) 161
BaeGI GKGCMC 2 cut(s) 986, 1399
BalI TGGCCA 1 cut(s) 936
BamHI GGATCC 1 cut(s) 485
BanI GGYRCC 2 cut(s) 964, 1434
BanII GRGCYC 4 cut(s) 61, 462, 830, 986
BarI GAAGNNNNNNTAC 2 cut(s) 1184, 1216
BauI CACGAG 1 cut(s) 856
Bbv12I GWGCWC 3 cut(s) 1399, 2008, 2058
BbvI GCAGC 8 cut(s) 335, 357, 369, 488, 597, 868, 1717, 1943
BccI CCATC 5 cut(s) 161, 449, 638, 1506, 1978
BceAI ACGGC 3 cut(s) 66, 125, 514
BcgI CGANNNNNNTGC 6 cut(s) 55, 89, 260, 294, 2035, 2069
BciT130I CCWGG 3 cut(s) 596, 760, 1189
BcnI CCSGG 1 cut(s) 981
BcoDI GTCTC 2 cut(s) 1172, 1837
BfaI CTAG 6 cut(s) 524, 624, 897, 923, 1697, 1740
BfmI CTRYAG 6 cut(s) 321, 364, 589, 1314, 1580, 1801
BfuAI ACCTGC 1 cut(s) 1587
BlpI GCTNAGC 3 cut(s) 77, 840, 1689
Bme1390I CCNGG 4 cut(s) 596, 760, 981, 1189
Bme18I GGWCC 1 cut(s) 161
BmeT110I CYCGRG 2 cut(s) 60, 985
BmgBI CACGTC 1 cut(s) 1977
BmgT120I GGNCC 4 cut(s) 161, 982, 983, 1184
BmiI GGNNCC 7 cut(s) 162, 487, 966, 984, 1186, 1436, 1755
BmrFI CCNGG 4 cut(s) 596, 760, 981, 1189
BmsI GCATC 4 cut(s) 268, 294, 1414, 2085
BplI GAGNNNNNCTC 2 cut(s) 43, 75
Bpu1102I GCTNAGC 3 cut(s) 77, 840, 1689
BpuEI CTTGAG 2 cut(s) 942, 1346
BpuMI CCSGG 1 cut(s) 981
BsaHI GRCGYC 1 cut(s) 1284
BsaI GGTCTC 1 cut(s) 1837
BsaJI CCNNGG 4 cut(s) 8, 595, 1187, 1563
BsaWI WCCGGW 3 cut(s) 549, 787, 1756
BsaXI ACNNNNNCTCC 4 cut(s) 563, 593, 2067, 2097
Bsc4I CCNNNNNNNGG 3 cut(s) 14, 556, 1868
Bse118I RCCGGY 3 cut(s) 242, 281, 549
Bse1I ACTGG 2 cut(s) 1186, 2099
BseAI TCCGGA 2 cut(s) 787, 1756
BseBI CCWGG 3 cut(s) 596, 760, 1189
BseDI CCNNGG 4 cut(s) 8, 595, 1187, 1563
BseGI GGATG 3 cut(s) 300, 649, 2008
BseLI CCNNNNNNNGG 3 cut(s) 14, 556, 1868
BseMII CTCAG 3 cut(s) 828, 854, 1703
BseNI ACTGG 2 cut(s) 1186, 2099
BseRI GAGGAG 3 cut(s) 141, 243, 1855
BseSI GKGCMC 2 cut(s) 986, 1399
BseX3I CGGCCG 1 cut(s) 199
BseXI GCAGC 8 cut(s) 335, 357, 369, 488, 597, 868, 1717, 1943
BseYI CCCAGC 1 cut(s) 1847
BsgI GTGCAG 1 cut(s) 960
Bsh1236I CGCG 2 cut(s) 30, 635
Bsh1285I CGRYCG 2 cut(s) 202, 355
BshFI GGCC 7 cut(s) 201, 528, 936, 984, 1185, 1359, 1562
BshNI GGYRCC 2 cut(s) 964, 1434
BshTI ACCGGT 1 cut(s) 549
BsiEI CGRYCG 2 cut(s) 202, 355
BsiHKAI GWGCWC 3 cut(s) 1399, 2008, 2058
BsiHKCI CYCGRG 2 cut(s) 60, 985
BsiSI CCGG 9 cut(s) 167, 243, 282, 550, 582, 788, 980, 1757, 1862
BslFI GGGAC 2 cut(s) 129, 577
BslI CCNNNNNNNGG 3 cut(s) 14, 556, 1868
BsmAI GTCTC 2 cut(s) 1172, 1837
BsmFI GGGAC 2 cut(s) 129, 577
BsmI GAATGC 1 cut(s) 833
BsnI GGCC 7 cut(s) 201, 528, 936, 984, 1185, 1359, 1562
Bso31I GGTCTC 1 cut(s) 1837
BsoBI CYCGRG 2 cut(s) 60, 985
Bsp120I GGGCCC 1 cut(s) 982
Bsp1286I GDGCHC 7 cut(s) 61, 462, 830, 986, 1399, 2008, 2058
Bsp13I TCCGGA 2 cut(s) 787, 1756
Bsp143I GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
Bsp1720I GCTNAGC 3 cut(s) 77, 840, 1689
BspANI GGCC 7 cut(s) 201, 528, 936, 984, 1185, 1359, 1562
BspCNI CTCAG 3 cut(s) 827, 853, 1702
BspEI TCCGGA 2 cut(s) 787, 1756
BspFNI CGCG 2 cut(s) 30, 635
BspLI GGNNCC 7 cut(s) 162, 487, 966, 984, 1186, 1436, 1755
BspMAI CTGCAG 2 cut(s) 325, 1584
BspMI ACCTGC 1 cut(s) 1587
BspPI GGATC 3 cut(s) 480, 493, 517
BspT107I GGYRCC 2 cut(s) 964, 1434
BspTNI GGTCTC 1 cut(s) 1837
BsrBI CCGCTC 1 cut(s) 54
BsrFI RCCGGY 3 cut(s) 242, 281, 549
BsrI ACTGG 2 cut(s) 1186, 2099
BssAI RCCGGY 3 cut(s) 242, 281, 549
BssECI CCNNGG 4 cut(s) 8, 595, 1187, 1563
BssMI GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
BssNI GRCGYC 1 cut(s) 1284
BssSI CACGAG 1 cut(s) 856
BssT1I CCWWGG 1 cut(s) 8
Bst2BI CACGAG 1 cut(s) 856
Bst2UI CCWGG 3 cut(s) 596, 760, 1189
Bst4CI ACNGT 2 cut(s) 505, 766
Bst6I CTCTTC 3 cut(s) 118, 199, 220
BstACI GRCGYC 1 cut(s) 1284
BstC8I GCNNGC 4 cut(s) 244, 283, 462, 701
BstDEI CTNAG 5 cut(s) 77, 814, 840, 1689, 1946
BstF5I GGATG 3 cut(s) 300, 649, 2008
BstFNI CGCG 2 cut(s) 30, 635
BstHHI GCGC 3 cut(s) 30, 345, 637
BstKTI GATC 8 cut(s) 43, 488, 512, 801, 852, 1038, 1600, 1702
BstMAI GTCTC 2 cut(s) 1172, 1837
BstMBI GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
BstMCI CGRYCG 2 cut(s) 202, 355
BstMWI GCNNNNNNNGC 2 cut(s) 525, 591
BstNI CCWGG 3 cut(s) 596, 760, 1189
BstNSI RCATGY 3 cut(s) 1522, 1730, 1836
BstSCI CCNGG 4 cut(s) 594, 758, 979, 1187
BstSFI CTRYAG 6 cut(s) 321, 364, 589, 1314, 1580, 1801
BstSLI GKGCMC 2 cut(s) 986, 1399
BstUI CGCG 2 cut(s) 30, 635
BstV1I GCAGC 8 cut(s) 335, 357, 369, 488, 597, 868, 1717, 1943
BstX2I RGATCY 2 cut(s) 485, 509
BstXI CCANNNNNNTGG 1 cut(s) 1777
BstYI RGATCY 2 cut(s) 485, 509
BstZI CGGCCG 1 cut(s) 199
BsuRI GGCC 7 cut(s) 201, 528, 936, 984, 1185, 1359, 1562
BtgZI GCGATG 2 cut(s) 468, 616
BtrI CACGTC 1 cut(s) 1977
BtsCI GGATG 3 cut(s) 300, 649, 2008
BtsI GCAGTG 2 cut(s) 318, 1659
BtsIMutI CAGTG 4 cut(s) 256, 318, 1659, 2106
BveI ACCTGC 1 cut(s) 1587
Cac8I GCNNGC 4 cut(s) 244, 283, 462, 701
CfoI GCGC 3 cut(s) 30, 345, 637
Cfr10I RCCGGY 3 cut(s) 242, 281, 549
Cfr13I GGNCC 4 cut(s) 161, 982, 983, 1184
CseI GACGC 3 cut(s) 19, 337, 1273
Csp6I GTAC 5 cut(s) 332, 678, 965, 1382, 1950
CspAI ACCGGT 1 cut(s) 549
CspCI CAANNNNNGTGG 2 cut(s) 394, 429
CviAII CATG 7 cut(s) 379, 1519, 1642, 1703, 1727, 1750, 1833
CviQI GTAC 5 cut(s) 332, 678, 965, 1382, 1950
DdeI CTNAG 5 cut(s) 77, 814, 840, 1689, 1946
DpnI GATC 8 cut(s) 42, 487, 511, 800, 851, 1037, 1599, 1701
DpnII GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
DraI TTTAAA 1 cut(s) 1507
DrdI GACNNNNNNGTC 1 cut(s) 266
DseDI GACNNNNNNGTC 1 cut(s) 266
EaeI YGGCCR 2 cut(s) 199, 934
EagI CGGCCG 1 cut(s) 199
Eam1104I CTCTTC 3 cut(s) 118, 199, 220
EarI CTCTTC 3 cut(s) 118, 199, 220
EciI GGCGGA 4 cut(s) 127, 153, 293, 1071
EclXI CGGCCG 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 8
Eco147I AGGCCT 2 cut(s) 528, 1359
Eco24I GRGCYC 4 cut(s) 61, 462, 830, 986
Eco31I GGTCTC 1 cut(s) 1837
Eco32I GATATC 2 cut(s) 1338, 1624
Eco47I GGWCC 1 cut(s) 161
Eco52I CGGCCG 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 232
Eco88I CYCGRG 2 cut(s) 60, 985
EcoRI GAATTC 2 cut(s) 179, 1451
EcoRII CCWGG 3 cut(s) 594, 758, 1187
EcoRV GATATC 2 cut(s) 1338, 1624
EcoT14I CCWWGG 1 cut(s) 8
EcoT38I GRGCYC 4 cut(s) 61, 462, 830, 986
ErhI CCWWGG 1 cut(s) 8
FaeI CATG 7 cut(s) 382, 1522, 1645, 1706, 1730, 1753, 1836
FaqI GGGAC 2 cut(s) 129, 577
FatI CATG 7 cut(s) 378, 1518, 1641, 1702, 1726, 1749, 1832
FauI CCCGC 4 cut(s) 47, 101, 106, 553
FblI GTMKAC 2 cut(s) 1464, 1800
FokI GGATG 3 cut(s) 287, 656, 1995
FriOI GRGCYC 4 cut(s) 61, 462, 830, 986
FspBI CTAG 6 cut(s) 524, 624, 897, 923, 1697, 1740
GlaI GCGC 3 cut(s) 29, 344, 636
GsaI CCCAGC 1 cut(s) 1851
HaeIII GGCC 7 cut(s) 201, 528, 936, 984, 1185, 1359, 1562
HapII CCGG 9 cut(s) 167, 243, 282, 550, 582, 788, 980, 1757, 1862
HgaI GACGC 3 cut(s) 19, 337, 1273
HhaI GCGC 3 cut(s) 30, 345, 637
Hin1I GRCGYC 1 cut(s) 1284
Hin1II CATG 7 cut(s) 382, 1522, 1645, 1706, 1730, 1753, 1836
Hin6I GCGC 3 cut(s) 28, 343, 635
HinP1I GCGC 3 cut(s) 28, 343, 635
HindIII AAGCTT 1 cut(s) 1247
HpaII CCGG 9 cut(s) 167, 243, 282, 550, 582, 788, 980, 1757, 1862
HphI GGTGA 7 cut(s) 29, 50, 61, 301, 394, 412, 1332
Hpy166II GTNNAC 7 cut(s) 420, 867, 1276, 1397, 1465, 1801, 1952
Hpy188I TCNGA 3 cut(s) 1111, 1132, 1795
Hpy188III TCNNGA 7 cut(s) 788, 1148, 1350, 1697, 1757, 2012, 2117
Hpy8I GTNNAC 7 cut(s) 420, 867, 1276, 1397, 1465, 1801, 1952
Hpy99I CGWCG 6 cut(s) 35, 272, 353, 398, 500, 539
HpyAV CCTTC 8 cut(s) 166, 266, 475, 653, 903, 939, 2119, 2123
HpyCH4III ACNGT 2 cut(s) 505, 766
HpyCH4IV ACGT 3 cut(s) 566, 1915, 1976
HpyCH4V TGCA 8 cut(s) 323, 775, 833, 977, 1397, 1420, 1582, 1615
HpyF10VI GCNNNNNNNGC 2 cut(s) 525, 591
HpyF3I CTNAG 5 cut(s) 77, 814, 840, 1689, 1946
HpySE526I ACGT 3 cut(s) 566, 1915, 1976
Hsp92I GRCGYC 1 cut(s) 1284
Hsp92II CATG 7 cut(s) 382, 1522, 1645, 1706, 1730, 1753, 1836
HspAI GCGC 3 cut(s) 28, 343, 635
Kpn2I TCCGGA 2 cut(s) 787, 1756
KpnI GGTACC 1 cut(s) 968
KroI GCCGGC 2 cut(s) 242, 281
KroNI GCCGGC 2 cut(s) 244, 283
Kzo9I GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
LmnI GCTCC 1 cut(s) 1759
Lsp1109I GCAGC 8 cut(s) 335, 357, 369, 488, 597, 868, 1717, 1943
LweI GCATC 4 cut(s) 268, 294, 1414, 2085
MaeI CTAG 6 cut(s) 524, 624, 897, 923, 1697, 1740
MaeII ACGT 3 cut(s) 566, 1915, 1976
MaeIII GTNAC 4 cut(s) 95, 649, 1148, 1745
MalI GATC 8 cut(s) 42, 487, 511, 800, 851, 1037, 1599, 1701
MbiI CCGCTC 1 cut(s) 54
MboI GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
MflI RGATCY 2 cut(s) 485, 509
MhlI GDGCHC 7 cut(s) 61, 462, 830, 986, 1399, 2008, 2058
MlsI TGGCCA 1 cut(s) 936
MluNI TGGCCA 1 cut(s) 936
MlyI GAGTC 1 cut(s) 143
Mox20I TGGCCA 1 cut(s) 936
MroI TCCGGA 2 cut(s) 787, 1756
MroNI GCCGGC 2 cut(s) 242, 281
MscI TGGCCA 1 cut(s) 936
MseI TTAA 6 cut(s) 603, 705, 1329, 1506, 1523, 1551
MslI CAYNNNNRTG 4 cut(s) 1517, 1605, 1775, 1959
Msp20I TGGCCA 1 cut(s) 936
MspA1I CMGCKG 2 cut(s) 1934, 2069
MspI CCGG 9 cut(s) 167, 243, 282, 550, 582, 788, 980, 1757, 1862
MspR9I CCNGG 4 cut(s) 596, 760, 981, 1189
Mva1269I GAATGC 1 cut(s) 833
MvaI CCWGG 3 cut(s) 596, 760, 1189
MvnI CGCG 2 cut(s) 30, 635
MwoI GCNNNNNNNGC 2 cut(s) 525, 591
NaeI GCCGGC 2 cut(s) 244, 283
NciI CCSGG 1 cut(s) 981
NdeII GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
NgoMIV GCCGGC 2 cut(s) 242, 281
NlaIII CATG 7 cut(s) 382, 1522, 1645, 1706, 1730, 1753, 1836
NlaIV GGNNCC 7 cut(s) 162, 487, 966, 984, 1186, 1436, 1755
NmeAIII GCCGAG 1 cut(s) 1024
NmuCI GTSAC 2 cut(s) 649, 1148
NspI RCATGY 3 cut(s) 1522, 1730, 1836
OliI CACNNNNGTG 1 cut(s) 1775
PceI AGGCCT 2 cut(s) 528, 1359
PciI ACATGT 1 cut(s) 1518
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PctI GAATGC 1 cut(s) 833
PdiI GCCGGC 2 cut(s) 244, 283
PfeI GAWTC 9 cut(s) 149, 620, 692, 731, 769, 917, 953, 1144, 1346
PfoI TCCNGGA 1 cut(s) 758
PinAI ACCGGT 1 cut(s) 549
PleI GAGTC 1 cut(s) 142
PpsI GAGTC 1 cut(s) 142
PscI ACATGT 1 cut(s) 1518
Psp6I CCWGG 3 cut(s) 594, 758, 1187
PspFI CCCAGC 1 cut(s) 1847
PspGI CCWGG 3 cut(s) 594, 758, 1187
PspN4I GGNNCC 7 cut(s) 162, 487, 966, 984, 1186, 1436, 1755
PspOMI GGGCCC 1 cut(s) 982
PspPI GGNCC 4 cut(s) 161, 982, 983, 1184
PstI CTGCAG 2 cut(s) 325, 1584
PsuI RGATCY 2 cut(s) 485, 509
PvuII CAGCTG 2 cut(s) 1934, 2069
RsaI GTAC 5 cut(s) 333, 679, 966, 1383, 1951
RsaNI GTAC 5 cut(s) 332, 678, 965, 1382, 1950
RseI CAYNNNNRTG 4 cut(s) 1517, 1605, 1775, 1959
SaqAI TTAA 6 cut(s) 603, 705, 1329, 1506, 1523, 1551
Sau3AI GATC 8 cut(s) 40, 485, 509, 798, 849, 1035, 1597, 1699
Sau96I GGNCC 4 cut(s) 161, 982, 983, 1184
SbfI CCTGCAGG 1 cut(s) 1584
SchI GAGTC 1 cut(s) 143
ScrFI CCNGG 4 cut(s) 596, 760, 981, 1189
SdaI CCTGCAGG 1 cut(s) 1584
SduI GDGCHC 7 cut(s) 61, 462, 830, 986, 1399, 2008, 2058
SfaNI GCATC 4 cut(s) 268, 294, 1414, 2085
SfcI CTRYAG 6 cut(s) 321, 364, 589, 1314, 1580, 1801
SinI GGWCC 1 cut(s) 161
SmiMI CAYNNNNRTG 4 cut(s) 1517, 1605, 1775, 1959
SmlI CTYRAG 2 cut(s) 957, 1361
SmoI CTYRAG 2 cut(s) 957, 1361
Sse8387I CCTGCAGG 1 cut(s) 1584
SseBI AGGCCT 2 cut(s) 528, 1359
SspMI CTAG 6 cut(s) 524, 624, 897, 923, 1697, 1740
StuI AGGCCT 2 cut(s) 528, 1359
StyD4I CCNGG 4 cut(s) 594, 758, 979, 1187
StyI CCWWGG 1 cut(s) 8
TaaI ACNGT 2 cut(s) 505, 766
TaiI ACGT 3 cut(s) 569, 1918, 1979
TaqII GACCGA 1 cut(s) 341
TatI WGTACW 3 cut(s) 331, 1381, 1949
TauI GCSGC 2 cut(s) 28, 1596
TfiI GAWTC 9 cut(s) 149, 620, 692, 731, 769, 917, 953, 1144, 1346
Tru1I TTAA 6 cut(s) 603, 705, 1329, 1506, 1523, 1551
Tru9I TTAA 6 cut(s) 603, 705, 1329, 1506, 1523, 1551
TscAI CASTG 4 cut(s) 256, 325, 1666, 2106
TseFI GTSAC 2 cut(s) 649, 1148
TseI GCWGC 8 cut(s) 323, 345, 382, 476, 585, 881, 1730, 1931
Tsp45I GTSAC 2 cut(s) 649, 1148
TspDTI ATGAA 6 cut(s) 289, 460, 1116, 1134, 1188, 1462
TspGWI ACGGA 1 cut(s) 498
TspRI CASTG 4 cut(s) 256, 325, 1666, 2106
VneI GTGCAC 1 cut(s) 1395
VpaK11BI GGWCC 1 cut(s) 161
XapI RAATTY 3 cut(s) 179, 1451, 1920
XbaI TCTAGA 1 cut(s) 1696
XceI RCATGY 3 cut(s) 1522, 1730, 1836
XmiI GTMKAC 2 cut(s) 1464, 1800
XspI CTAG 6 cut(s) 524, 624, 897, 923, 1697, 1740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.