Rmu_sc0004542.1_g000017

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004542.1
Physical Location & Seq
Forward (+)
56162 .. 61239
5078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004542.1_g000017.1.cds

Sequence Viewer

Length: 1722 bp
atggctgtcattaacaattgtggcaatgggatcatgacacagcttcatgagtattcactaaggcagcttcaattccttcttctcttcttctttctgctaaccccttctgcaacctcattaaacttcagtctctcgagcttttccgatgcagacactataaaaattgagccagatgctgagatctacaagcaagtcctccgactcaccaatagttctgtagatgaatcacggggggaaagcgtcggccgagccacctggcaagaacccttcctcctccgcgaaattgccaccggaaagctcgctgattttactacacacttcacctttgccatcgatactggacatgaatccacctatggagacgggctggtgttcttcatagcgaaaaatggttccttactcaacagcaacctaggaaaaggtggctctctcggcctccctgtcgaaaacccgacagatggcccgtcaagaaatattgggtacaactttgtggcggtggagtttgatatattccagaatactcaagaatccgtcgacgatcccaccggccaccatgtgggtattgatgtcaactctctcaagtccttgaacaccaagccttggaatggtagtatcacaaatggacaaagcaatagtgctacggttagttacaattctagcacaaaaaatcttagcgttgccttcactacttttgttaatggtatccaacaaatggactatctttctcaccaagttgatctgatagagtacttgcccgacttggtcattgtcggcttctctgctgcgacggggcataagtttgctgtgcacaagatcctctcatggaattttacttctactaacctgactatcccagaagatggggtgagtgtagcactagtcgttgggttgagtattggtggattcattatcttggttggtgggatgacattggtttggttcatcttttggaagcagagggaaggaggggaaagtggtgatgaagatcccatggttcttaataacgaatttgaaaaggggacaggccctaggaagttttcgtacagcgagttggctcgagcaacaaataattttgtagagggagagaagcttggagagggaggttttggtggggtttatagaggcttcataaaagacttgaactcatatgttgctgttaagagggtatccaagggatcgaagcaaggactaaaggagtatgcatcggaagtaaggatcatcagtcggcttaggcatcgaaatctggtgcaactaattggttggtgccatgaaaaaggtgagctcctacttgtctatgagtacatgcccaacggtagtttagattcccatctattcaaattaaaaagcttgttaagttggagagtaagatacaggattgctcaagggttggcgtctggcttattttacctacacgaagaatgggaacaatgtgttttgcacagggatatcaaatccagcaatattatgttggattcaaatttcaacgtcaagctaggggatttcgggctagctcgacttgtggaccatggaaaacagtcggaaacaacaatcgtagctggaaccagaggctacatggctctggaatatgttaccacaggaaaggctagcaaggaatcggatgtttacagcttcggagttcaaattcttccattaacagcgatagaaatctgcaaatcattgctttgccagtttgatgttgtaactgctctgttcagtaactga

Protein Analysis

573

Amino Acids

63.33

Weight (kDa)

5.74

Isoelectric Point (pI)

23.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1263
AccB7I CCANNNNNTGG 4 cut(s) 556, 600, 712, 860
AccI GTMKAC 1 cut(s) 534
AccII CGCG 1 cut(s) 279
AciI CCGC 2 cut(s) 277, 494
AclWI GGATC 6 cut(s) 38, 533, 808, 980, 1183, 1223
AcoI YGGCCR 2 cut(s) 244, 547
AcsI RAATTY 4 cut(s) 826, 1007, 1477, 1641
AcuI CTGAAG 1 cut(s) 109
AcyI GRCGYC 1 cut(s) 1391
AdeI CACNNNGTG 1 cut(s) 556
AfaI GTAC 4 cut(s) 482, 749, 1043, 1301
AfiI CCNNNNNNNGG 6 cut(s) 458, 556, 600, 605, 712, 860
AgsI TTSAA 8 cut(s) 71, 589, 1013, 1141, 1336, 1476, 1483, 1640
AhlI ACTAGT 1 cut(s) 877
AjnI CCWGG 1 cut(s) 254
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
Alw21I GWGCWC 2 cut(s) 810, 1284
Alw26I GTCTC 2 cut(s) 134, 354
Alw44I GTGCAC 1 cut(s) 806
AlwI GGATC 6 cut(s) 38, 533, 808, 980, 1183, 1223
AlwNI CAGNNNCTG 2 cut(s) 176, 1719
Ama87I CYCGRG 2 cut(s) 133, 1056
AoxI GGCC 5 cut(s) 244, 433, 460, 547, 1024
ApaLI GTGCAC 1 cut(s) 806
ApeKI GCWGC 2 cut(s) 64, 782
ApoI RAATTY 4 cut(s) 826, 1007, 1477, 1641
AspA2I CCTAGG 2 cut(s) 412, 1028
AspS9I GGNCC 3 cut(s) 461, 1025, 1522
AsuHPI GGTGA 6 cut(s) 196, 313, 719, 877, 989, 1289
AsuNHI GCTAGC 2 cut(s) 1507, 1604
AvaI CYCGRG 2 cut(s) 133, 1056
AvaII GGWCC 1 cut(s) 1522
AvrII CCTAGG 2 cut(s) 412, 1028
BaeGI GKGCMC 1 cut(s) 810
BanI GGYRCC 1 cut(s) 1263
BanII GRGCYC 1 cut(s) 1284
BarI GAAGNNNNNNTAC 2 cut(s) 1025, 1057
Bbv12I GWGCWC 2 cut(s) 810, 1284
BbvI GCAGC 2 cut(s) 76, 769
BccI CCATC 4 cut(s) 338, 452, 854, 1335
BciT130I CCWGG 1 cut(s) 256
BciVI GTATCC 2 cut(s) 713, 1177
BcoDI GTCTC 2 cut(s) 134, 354
BcuI ACTAGT 1 cut(s) 877
BfaI CTAG 7 cut(s) 413, 657, 878, 1029, 1493, 1508, 1605
BfmI CTRYAG 1 cut(s) 216
BfuI GTATCC 2 cut(s) 713, 1177
BglII AGATCT 1 cut(s) 180
BisI GCNGC 2 cut(s) 65, 783
BlnI CCTAGG 2 cut(s) 412, 1028
BlsI GCNGC 2 cut(s) 66, 784
BmcAI AGTACT 1 cut(s) 749
Bme1390I CCNGG 1 cut(s) 256
Bme18I GGWCC 1 cut(s) 1522
BmeT110I CYCGRG 2 cut(s) 133, 1056
BmgT120I GGNCC 3 cut(s) 461, 1025, 1522
BmiI GGNNCC 3 cut(s) 394, 1265, 1561
BmrFI CCNGG 1 cut(s) 256
BmsI GCATC 4 cut(s) 136, 163, 1211, 1243
BmtI GCTAGC 2 cut(s) 1511, 1608
Bpu10I CCTNAGC 1 cut(s) 1229
BpuEI CTTGAG 3 cut(s) 507, 563, 1365
Bsa29I ATCGAT 1 cut(s) 333
BsaBI GATNNNNATC 3 cut(s) 984, 1326, 1664
BsaHI GRCGYC 1 cut(s) 1391
BsaJI CCNNGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
BsaWI WCCGGW 1 cut(s) 290
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 6 cut(s) 458, 556, 600, 605, 712, 860
Bse118I RCCGGY 1 cut(s) 545
Bse1I ACTGG 2 cut(s) 343, 1687
Bse3DI GCAATG 2 cut(s) 31, 1676
Bse8I GATNNNNATC 3 cut(s) 984, 1326, 1664
BseBI CCWGG 1 cut(s) 256
BseCI ATCGAT 1 cut(s) 333
BseDI CCNNGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
BseGI GGATG 2 cut(s) 930, 1624
BseJI GATNNNNATC 3 cut(s) 984, 1326, 1664
BseLI CCNNNNNNNGG 6 cut(s) 458, 556, 600, 605, 712, 860
BseMI GCAATG 2 cut(s) 31, 1676
BseMII CTCAG 1 cut(s) 168
BseNI ACTGG 2 cut(s) 343, 1687
BseRI GAGGAG 1 cut(s) 263
BseSI GKGCMC 1 cut(s) 810
BseX3I CGGCCG 1 cut(s) 244
BseXI GCAGC 2 cut(s) 76, 769
Bsh1236I CGCG 1 cut(s) 279
Bsh1285I CGRYCG 1 cut(s) 247
BshFI GGCC 5 cut(s) 246, 435, 462, 549, 1026
BshNI GGYRCC 1 cut(s) 1263
BshVI ATCGAT 1 cut(s) 333
BsiEI CGRYCG 1 cut(s) 247
BsiHKAI GWGCWC 2 cut(s) 810, 1284
BsiHKCI CYCGRG 2 cut(s) 133, 1056
BsiSI CCGG 2 cut(s) 291, 546
BslFI GGGAC 1 cut(s) 1033
BslI CCNNNNNNNGG 6 cut(s) 458, 556, 600, 605, 712, 860
BsmAI GTCTC 2 cut(s) 134, 354
BsmBI CGTCTC 1 cut(s) 354
BsmFI GGGAC 1 cut(s) 1033
BsnI GGCC 5 cut(s) 246, 435, 462, 549, 1026
BsoBI CYCGRG 2 cut(s) 133, 1056
Bsp1286I GDGCHC 2 cut(s) 810, 1284
Bsp143I GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
Bsp19I CCATGG 2 cut(s) 990, 1525
BspACI CCGC 2 cut(s) 277, 494
BspANI GGCC 5 cut(s) 246, 435, 462, 549, 1026
BspCNI CTCAG 1 cut(s) 169
BspDI ATCGAT 1 cut(s) 333
BspFNI CGCG 1 cut(s) 279
BspHI TCATGA 2 cut(s) 33, 46
BspLI GGNNCC 3 cut(s) 394, 1265, 1561
BspOI GCTAGC 2 cut(s) 1511, 1608
BspPI GGATC 6 cut(s) 38, 533, 808, 980, 1183, 1223
BspT107I GGYRCC 1 cut(s) 1263
BsrDI GCAATG 2 cut(s) 31, 1676
BsrFI RCCGGY 1 cut(s) 545
BsrI ACTGG 2 cut(s) 343, 1687
BssAI RCCGGY 1 cut(s) 545
BssECI CCNNGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
BssMI GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
BssNI GRCGYC 1 cut(s) 1391
BssT1I CCWWGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
Bst2UI CCWGG 1 cut(s) 256
Bst4CI ACNGT 3 cut(s) 643, 1313, 1536
Bst6I CTCTTC 1 cut(s) 89
BstACI GRCGYC 1 cut(s) 1391
BstC8I GCNNGC 3 cut(s) 300, 1509, 1606
BstDEI CTNAG 4 cut(s) 59, 177, 671, 1229
BstDSI CCRYGG 2 cut(s) 990, 1525
BstF5I GGATG 2 cut(s) 930, 1624
BstFNI CGCG 1 cut(s) 279
BstKTI GATC 8 cut(s) 33, 183, 541, 739, 816, 988, 1178, 1218
BstMAI GTCTC 2 cut(s) 134, 354
BstMBI GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
BstMCI CGRYCG 1 cut(s) 247
BstMWI GCNNNNNNNGC 1 cut(s) 432
BstNI CCWGG 1 cut(s) 256
BstNSI RCATGY 1 cut(s) 1306
BstSCI CCNGG 1 cut(s) 254
BstSFI CTRYAG 1 cut(s) 216
BstSLI GKGCMC 1 cut(s) 810
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 76, 769
BstX2I RGATCY 3 cut(s) 180, 813, 985
BstYI RGATCY 3 cut(s) 180, 813, 985
BstZI CGGCCG 1 cut(s) 244
Bsu15I ATCGAT 1 cut(s) 333
BsuI GTATCC 2 cut(s) 713, 1177
BsuRI GGCC 5 cut(s) 246, 435, 462, 549, 1026
BsuTUI ATCGAT 1 cut(s) 333
BtgI CCRYGG 2 cut(s) 990, 1525
BtsCI GGATG 2 cut(s) 930, 1624
Cac8I GCNNGC 3 cut(s) 300, 1509, 1606
CaiI CAGNNNCTG 2 cut(s) 176, 1719
CciI TCATGA 2 cut(s) 33, 46
Cfr10I RCCGGY 1 cut(s) 545
Cfr13I GGNCC 3 cut(s) 461, 1025, 1522
ClaI ATCGAT 1 cut(s) 333
CseI GACGC 2 cut(s) 229, 1380
Csp6I GTAC 4 cut(s) 481, 748, 1042, 1300
CviQI GTAC 4 cut(s) 481, 748, 1042, 1300
DdeI CTNAG 4 cut(s) 59, 177, 671, 1229
DpnI GATC 8 cut(s) 32, 182, 540, 738, 815, 987, 1177, 1217
DpnII GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
DraIII CACNNNGTG 1 cut(s) 556
EaeI YGGCCR 2 cut(s) 244, 547
EagI CGGCCG 1 cut(s) 244
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Ecl136II GAGCTC 1 cut(s) 1282
EclXI CGGCCG 1 cut(s) 244
Eco130I CCWWGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
Eco24I GRGCYC 1 cut(s) 1284
Eco32I GATATC 1 cut(s) 1447
Eco47I GGWCC 1 cut(s) 1522
Eco52I CGGCCG 1 cut(s) 244
Eco53kI GAGCTC 1 cut(s) 1282
Eco57I CTGAAG 1 cut(s) 109
Eco88I CYCGRG 2 cut(s) 133, 1056
EcoICRI GAGCTC 1 cut(s) 1282
EcoO109I RGGNCCY 1 cut(s) 1025
EcoRII CCWGG 1 cut(s) 254
EcoRV GATATC 1 cut(s) 1447
EcoT14I CCWWGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
EcoT22I ATGCAT 1 cut(s) 1204
EcoT38I GRGCYC 1 cut(s) 1284
ErhI CCWWGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
Esp3I CGTCTC 1 cut(s) 354
FaqI GGGAC 1 cut(s) 1033
FauNDI CATATG 1 cut(s) 1147
FblI GTMKAC 1 cut(s) 534
Fnu4HI GCNGC 2 cut(s) 65, 783
FokI GGATG 2 cut(s) 937, 1631
FriOI GRGCYC 1 cut(s) 1284
Fsp4HI GCNGC 2 cut(s) 65, 783
FspBI CTAG 7 cut(s) 413, 657, 878, 1029, 1493, 1508, 1605
GluI GCNGC 2 cut(s) 65, 783
HaeIII GGCC 5 cut(s) 246, 435, 462, 549, 1026
HapII CCGG 2 cut(s) 291, 546
HgaI GACGC 2 cut(s) 229, 1380
Hin1I GRCGYC 1 cut(s) 1391
HincII GTYRAC 2 cut(s) 535, 571
HindII GTYRAC 2 cut(s) 535, 571
HindIII AAGCTT 2 cut(s) 1088, 1345
HinfI GANTC 8 cut(s) 201, 224, 347, 527, 903, 1322, 1472, 1613
HpaII CCGG 2 cut(s) 291, 546
HphI GGTGA 6 cut(s) 196, 313, 719, 877, 989, 1289
Hpy166II GTNNAC 5 cut(s) 535, 571, 808, 1522, 1624
Hpy188I TCNGA 7 cut(s) 145, 200, 741, 1207, 1540, 1618, 1634
Hpy188III TCNNGA 7 cut(s) 34, 47, 133, 468, 514, 524, 1580
Hpy8I GTNNAC 5 cut(s) 535, 571, 808, 1522, 1624
Hpy99I CGWCG 4 cut(s) 245, 536, 539, 790
HpyAV CCTTC 5 cut(s) 86, 114, 277, 691, 956
HpyCH4III ACNGT 3 cut(s) 643, 1313, 1536
HpyCH4IV ACGT 1 cut(s) 1485
HpyCH4V TGCA 7 cut(s) 110, 149, 808, 1202, 1249, 1438, 1671
HpyF10VI GCNNNNNNNGC 1 cut(s) 432
HpyF3I CTNAG 4 cut(s) 59, 177, 671, 1229
HpySE526I ACGT 1 cut(s) 1485
Hsp92I GRCGYC 1 cut(s) 1391
Kzo9I GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
LmnI GCTCC 1 cut(s) 1287
Lsp1109I GCAGC 2 cut(s) 76, 769
LweI GCATC 4 cut(s) 136, 163, 1211, 1243
MaeI CTAG 7 cut(s) 413, 657, 878, 1029, 1493, 1508, 1605
MaeII ACGT 1 cut(s) 1485
MaeIII GTNAC 4 cut(s) 647, 1588, 1699, 1715
MalI GATC 8 cut(s) 32, 182, 540, 738, 815, 987, 1177, 1217
MboI GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
MboII GAAGA 8 cut(s) 71, 76, 79, 367, 869, 995, 1427, 1637
MfeI CAATTG 1 cut(s) 16
MflI RGATCY 3 cut(s) 180, 813, 985
MhlI GDGCHC 2 cut(s) 810, 1284
MlyI GAGTC 1 cut(s) 195
MmeI TCCRAC 5 cut(s) 223, 730, 1337, 1449, 1518
Mph1103I ATGCAT 1 cut(s) 1204
MseI TTAA 8 cut(s) 12, 119, 696, 999, 1158, 1340, 1352, 1652
MspI CCGG 2 cut(s) 291, 546
MspR9I CCNGG 1 cut(s) 256
MunI CAATTG 1 cut(s) 16
MvaI CCWGG 1 cut(s) 256
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 1 cut(s) 432
NcoI CCATGG 2 cut(s) 990, 1525
NdeI CATATG 1 cut(s) 1147
NdeII GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
NheI GCTAGC 2 cut(s) 1507, 1604
NlaIV GGNNCC 3 cut(s) 394, 1265, 1561
NmeAIII GCCGAG 2 cut(s) 272, 411
NsiI ATGCAT 1 cut(s) 1204
NspI RCATGY 1 cut(s) 1306
PaeR7I CTCGAG 2 cut(s) 133, 1056
PagI TCATGA 2 cut(s) 33, 46
PfeI GAWTC 7 cut(s) 224, 347, 527, 903, 1322, 1472, 1613
PflFI GACNNNGTC 1 cut(s) 761
PflMI CCANNNNNTGG 4 cut(s) 556, 600, 712, 860
PkrI GCNGC 2 cut(s) 66, 784
PleI GAGTC 1 cut(s) 195
PpsI GAGTC 1 cut(s) 195
Psp124BI GAGCTC 1 cut(s) 1284
Psp6I CCWGG 1 cut(s) 254
PspGI CCWGG 1 cut(s) 254
PspN4I GGNNCC 3 cut(s) 394, 1265, 1561
PspPI GGNCC 3 cut(s) 461, 1025, 1522
PspXI VCTCGAGB 1 cut(s) 1056
PstNI CAGNNNCTG 2 cut(s) 176, 1719
PsuI RGATCY 3 cut(s) 180, 813, 985
PsyI GACNNNGTC 1 cut(s) 761
RsaI GTAC 4 cut(s) 482, 749, 1043, 1301
RsaNI GTAC 4 cut(s) 481, 748, 1042, 1300
SacI GAGCTC 1 cut(s) 1284
SalI GTCGAC 1 cut(s) 533
SaqAI TTAA 8 cut(s) 12, 119, 696, 999, 1158, 1340, 1352, 1652
SatI GCNGC 2 cut(s) 65, 783
Sau3AI GATC 8 cut(s) 30, 180, 538, 736, 813, 985, 1175, 1215
Sau96I GGNCC 3 cut(s) 461, 1025, 1522
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 1 cut(s) 195
ScrFI CCNGG 1 cut(s) 256
SduI GDGCHC 2 cut(s) 810, 1284
SfaNI GCATC 4 cut(s) 136, 163, 1211, 1243
SfcI CTRYAG 1 cut(s) 216
Sfr274I CTCGAG 2 cut(s) 133, 1056
SgrDI CGTCGACG 1 cut(s) 533
SinI GGWCC 1 cut(s) 1522
SlaI CTCGAG 2 cut(s) 133, 1056
SmlI CTYRAG 5 cut(s) 133, 522, 578, 1056, 1380
SmoI CTYRAG 5 cut(s) 133, 522, 578, 1056, 1380
SpeI ACTAGT 1 cut(s) 877
SsiI CCGC 2 cut(s) 277, 494
SspI AATATT 2 cut(s) 475, 1462
SspMI CTAG 7 cut(s) 413, 657, 878, 1029, 1493, 1508, 1605
SstI GAGCTC 1 cut(s) 1284
StyD4I CCNGG 1 cut(s) 254
StyI CCWWGG 6 cut(s) 412, 599, 990, 1028, 1170, 1525
TaaI ACNGT 3 cut(s) 643, 1313, 1536
TaiI ACGT 1 cut(s) 1488
TaqI TCGA 8 cut(s) 134, 333, 444, 534, 1057, 1178, 1237, 1513
TatI WGTACW 2 cut(s) 747, 1299
TfiI GAWTC 7 cut(s) 224, 347, 527, 903, 1322, 1472, 1613
Tru1I TTAA 8 cut(s) 12, 119, 696, 999, 1158, 1340, 1352, 1652
Tru9I TTAA 8 cut(s) 12, 119, 696, 999, 1158, 1340, 1352, 1652
TseI GCWGC 2 cut(s) 64, 782
TspDTI ATGAA 9 cut(s) 35, 237, 360, 367, 895, 931, 996, 1117, 1284
TspGWI ACGGA 1 cut(s) 520
Tth111I GACNNNGTC 1 cut(s) 761
Van91I CCANNNNNTGG 4 cut(s) 556, 600, 712, 860
VneI GTGCAC 1 cut(s) 806
VpaK11BI GGWCC 1 cut(s) 1522
XapI RAATTY 4 cut(s) 826, 1007, 1477, 1641
XceI RCATGY 1 cut(s) 1306
XcmI CCANNNNNNNNNTGG 1 cut(s) 1570
XhoI CTCGAG 2 cut(s) 133, 1056
XmaJI CCTAGG 2 cut(s) 412, 1028
XmiI GTMKAC 1 cut(s) 534
XspI CTAG 7 cut(s) 413, 657, 878, 1029, 1493, 1508, 1605
ZrmI AGTACT 1 cut(s) 749
Zsp2I ATGCAT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.