Prupe.4G175100_v2.0.a1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
10364905 .. 10367339
2435 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G175100.2

Sequence Viewer

Length: 2112 bp
ATGGTTGTCCTCCTTCTTCTTCTCTTGTTTCACTTAGCCCCTTGTGCAACCTCATTAAACTTCAATTTCTCCACCTTCCCAAATGGCATCAACAACCTATCTTTCGAGGGAGATGCTTTCGTCGACGGTGCTTTCCTCCGACTCACCAAAAGCGCTGCTGACGACGTGCAAGACCAAAGTGTCGGTCGAGCCACCTACAGCCAACCCTTCCTCCTCCGCGACAACGCCACCGGAAAACTCGCGGACTTCACCACAAATTTCACATTCACCATCAACTCGCTGGACAAAACACCCTATGCAGATGGCCTCGCCTTCTTTTTGGCGCCAAACGGGTCTGCACTCAACAGAACAATAGGCAGAGGCGGCTCTCTTGGCCTCCCAACCATAAACCCAGAAAAAAACGAGTCCACGAATCTGTACCCGTTTGTGGCAGTGGAGTTTGACATTTTTCAGAACGCCGTGACGTCTGTCCAAGATCCCGCCGGCGATCATGTTGGTATTGATGTCAACTCTGTCAAGTCTAAGGTTACAAGGGCGTGGAATGGTAGTATTACACAGGGACGAGACAATAATGCTTGGATTCGTTACGATTCTGGATCCAAAAATCTTAGCGTTACATTTACTACTTATGAAAATGGTGTCTGGGTTAGAAGGTATTTTGATTACATGGTTGATGTGAATGAGATTTTGCAGGGTTGGGTGATTGTTGGGTTCTCTGCTGCAACAGGTGCTATGACTGCTCTGCACAAGATCAACTCATGGAGTTTCAATTCGACATCGCTGATTGATGAGAATGCGAAAAACAACACACCAGTAGCTCCTGAGCCGACCCCCATTGTTGAACCCGAGTCAGGAAATGGCATCAACATTGGACTTGTGGTTGGGCTGGTTGTTGGTGGGTGTGTTCTTTTGGTTGGTGGGTTTTGTTTGGTTTGGTTCATTTTTTGGAAGAAGGGGGGAACAGGGGAAAGTAGCGACAATGATGAAGATCCTATGGTCAACGATCCGATTGATGACGAATTCGAAAAGGGGACAGGCCCAAAGAAGTTTTCGTACAAGATATTGGCTCAATCGACAAATGATTTTGACGAGGGAGAGAAGCTTGGAGAGGGAGGGTTTGGTGGGGTTTACAGAGGCTTCGTAAAAGATTTGAACTCATATGTTGCTGTTAAGAGGGTATCAAGTGGGTCTAGACAGGGGCTGAAGGAGTACGCAGCAGAAGTAAGGATCATCAGTCGACTTAGGCATCGAAATCTGGTGCAACTCATTGGTTGGTGCCACGAAAAGAGAGAACTCCTACTTGTTTACGAGTTCATGTCCAATGGAAGCTTAGATTCCCATTTGTTCAAAGGAAAAAGCTTGTTAGGTTGGGAGGCAAGGTACAGAATTGCTCAAGGCTTGGCGTCCGGATTGTTCTATCTACACGAAGAATGGGAACAATGTGTGTTGCACAGAGATATCAAATCCAGCAACATTATGTTGGATTCGAATTTCAACGCCAAACTGGGAGATTTTGGGTTGGCTCGACTTGTTGACCACGGGAAACAATCACAAACTACTGTTCTGGCTGGAACCATGGGCTACATGGCTCCTGAATGTGTCACCACAGGAAAGGCTAGCAAGGAAACAGATGTTTACAGTTTTGGAGTTGTTGCTTTGGAGATAGCTTGTGGGAGAAAACCCATTGATCCCAAGTTGGGAACAAGTAAAATCAACATGGTAGAGTGGGTTTGGGAGCTTTATGGACAAGGGAAAGTCATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAGAAACAAATAGAGTGCTTGTTGATTGTTGGGTTGTGGTGTGCTCATCCAGATTACAAGATCAGGCCTTCGACGCAACAAATAATTCAAGTGCTTAGCTTAGAAGTTGCGCCGCCTATTCTTCCATCAAAGATGCCAATAGCCAGCTACTTTTCTCCTCCAGTATCATTTTCAATCTTGTCCGGTGATGTTACTGGTTCTGAAAGAGGTCAAACAGAGTCTTTAAGTTATGGTTACAACACCAATTCATCACAGTTCACCTCATCTTCCGCTTCCAATTCTTCTCCATCAGCTTCACTTTTGTACACAAATTAA

Protein Analysis

704

Amino Acids

76.91

Weight (kDa)

5.24

Isoelectric Point (pI)

30.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 179
AatII GACGTC 1 cut(s) 467
AccB1I GGYRCC 2 cut(s) 322, 1275
AccI GTMKAC 2 cut(s) 123, 1237
AccII CGCG 2 cut(s) 219, 242
AccIII TCCGGA 1 cut(s) 1406
AciI CCGC 6 cut(s) 217, 242, 363, 480, 1910, 2067
AclWI GGATC 7 cut(s) 470, 591, 604, 983, 998, 1235, 1682
AcsI RAATTY 3 cut(s) 256, 1019, 1489
AcuI CTGAAG 1 cut(s) 1223
AcyI GRCGYC 3 cut(s) 323, 464, 1403
AfaI GTAC 5 cut(s) 419, 1055, 1211, 1382, 2102
AfeI AGCGCT 1 cut(s) 154
AfiI CCNNNNNNNGG 3 cut(s) 427, 851, 1697
AgsI TTSAA 9 cut(s) 64, 769, 842, 1153, 1348, 1495, 1763, 1886, 1971
AjiI CACGTC 1 cut(s) 166
AjuI GAANNNNNNNTTGG 2 cut(s) 1033, 1065
Alw21I GWGCWC 1 cut(s) 1843
Alw26I GTCTC 1 cut(s) 558
AlwI GGATC 7 cut(s) 470, 591, 604, 983, 998, 1235, 1682
AlwNI CAGNNNCTG 1 cut(s) 1201
Ama87I CYCGRG 1 cut(s) 845
Aor13HI TCCGGA 1 cut(s) 1406
Aor51HI AGCGCT 1 cut(s) 154
AoxI GGCC 4 cut(s) 304, 373, 1036, 1862
ApeKI GCWGC 4 cut(s) 155, 719, 1214, 1766
ApoI RAATTY 3 cut(s) 256, 1019, 1489
ArsI GACNNNNNNTTYG 2 cut(s) 169, 201
AspLEI GCGC 3 cut(s) 155, 325, 1909
AspS9I GGNCC 1 cut(s) 1037
AsuHPI GGTGA 7 cut(s) 136, 241, 259, 712, 1594, 1994, 2047
AsuII TTCGAA 2 cut(s) 1023, 1487
AsuNHI GCTAGC 1 cut(s) 1616
AvaI CYCGRG 1 cut(s) 845
BamHI GGATCC 1 cut(s) 596
BanI GGYRCC 2 cut(s) 322, 1275
BarI GAAGNNNNNNTAC 2 cut(s) 1037, 1069
Bbv12I GWGCWC 1 cut(s) 1843
BbvI GCAGC 4 cut(s) 142, 706, 1226, 1778
BccI CCATC 4 cut(s) 278, 296, 1930, 2092
BceAI ACGGC 1 cut(s) 443
BcgI CGANNNNNNTGC 2 cut(s) 95, 129
BcoDI GTCTC 1 cut(s) 558
BfaI CTAG 2 cut(s) 1191, 1617
BfmI CTRYAG 1 cut(s) 196
BfoI RGCGCY 2 cut(s) 156, 326
BisI GCNGC 6 cut(s) 156, 364, 720, 1215, 1767, 1910
BlpI GCTNAGC 1 cut(s) 1892
BlsI GCNGC 6 cut(s) 157, 365, 721, 1216, 1768, 1911
BmeT110I CYCGRG 1 cut(s) 845
BmgBI CACGTC 1 cut(s) 166
BmgT120I GGNCC 1 cut(s) 1037
BmiI GGNNCC 5 cut(s) 324, 598, 1277, 1573, 1590
BmrI ACTGGG 1 cut(s) 1514
BmsI GCATC 5 cut(s) 96, 103, 870, 1255, 1920
BmtI GCTAGC 1 cut(s) 1620
BmuI ACTGGG 1 cut(s) 1514
BoxI GACNNNNGTC 1 cut(s) 467
BpmI CTGGAG 1 cut(s) 1941
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 1 cut(s) 1892
Bpu14I TTCGAA 2 cut(s) 1023, 1487
BpuEI CTTGAG 1 cut(s) 1377
BsaBI GATNNNNATC 1 cut(s) 987
BsaHI GRCGYC 3 cut(s) 323, 464, 1403
BsaJI CCNNGG 2 cut(s) 1537, 1575
BsaWI WCCGGW 3 cut(s) 230, 1406, 1979
BsaXI ACNNNNNCTCC 4 cut(s) 195, 225, 1364, 1394
Bsc4I CCNNNNNNNGG 3 cut(s) 427, 851, 1697
Bse118I RCCGGY 1 cut(s) 482
Bse1I ACTGG 4 cut(s) 812, 1509, 1958, 1996
Bse8I GATNNNNATC 1 cut(s) 987
BseAI TCCGGA 1 cut(s) 1406
BseDI CCNNGG 2 cut(s) 1537, 1575
BseGI GGATG 1 cut(s) 1843
BseJI GATNNNNATC 1 cut(s) 987
BseLI CCNNNNNNNGG 3 cut(s) 427, 851, 1697
BseMII CTCAG 1 cut(s) 813
BseNI ACTGG 4 cut(s) 812, 1509, 1958, 1996
BseRI GAGGAG 2 cut(s) 203, 1944
BseXI GCAGC 4 cut(s) 142, 706, 1226, 1778
BsgI GTGCAG 2 cut(s) 321, 728
Bsh1236I CGCG 2 cut(s) 219, 242
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 4 cut(s) 306, 375, 1038, 1864
BshNI GGYRCC 2 cut(s) 322, 1275
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 1843
BsiHKCI CYCGRG 1 cut(s) 845
BsiSI CCGG 4 cut(s) 231, 483, 1407, 1980
BslFI GGGAC 2 cut(s) 573, 1045
BslI CCNNNNNNNGG 3 cut(s) 427, 851, 1697
BsmAI GTCTC 1 cut(s) 558
BsmFI GGGAC 2 cut(s) 573, 1045
BsmI GAATGC 1 cut(s) 799
BsnI GGCC 4 cut(s) 306, 375, 1038, 1864
BsoBI CYCGRG 1 cut(s) 845
Bsp119I TTCGAA 2 cut(s) 1023, 1487
Bsp1286I GDGCHC 1 cut(s) 1843
Bsp13I TCCGGA 1 cut(s) 1406
Bsp1407I TGTACA 1 cut(s) 2100
Bsp143I GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
Bsp1720I GCTNAGC 1 cut(s) 1892
Bsp19I CCATGG 1 cut(s) 1575
BspACI CCGC 6 cut(s) 217, 242, 363, 480, 1910, 2067
BspANI GGCC 4 cut(s) 306, 375, 1038, 1864
BspCNI CTCAG 1 cut(s) 814
BspEI TCCGGA 1 cut(s) 1406
BspFNI CGCG 2 cut(s) 219, 242
BspLI GGNNCC 5 cut(s) 324, 598, 1277, 1573, 1590
BspOI GCTAGC 1 cut(s) 1620
BspPI GGATC 7 cut(s) 470, 591, 604, 983, 998, 1235, 1682
BspT104I TTCGAA 2 cut(s) 1023, 1487
BspT107I GGYRCC 2 cut(s) 322, 1275
BsrFI RCCGGY 1 cut(s) 482
BsrGI TGTACA 1 cut(s) 2100
BsrI ACTGG 4 cut(s) 812, 1509, 1958, 1996
BssAI RCCGGY 1 cut(s) 482
BssECI CCNNGG 2 cut(s) 1537, 1575
BssMI GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
BssNI GRCGYC 3 cut(s) 323, 464, 1403
BssT1I CCWWGG 1 cut(s) 1575
Bst4CI ACNGT 4 cut(s) 128, 1561, 1640, 2052
BstACI GRCGYC 3 cut(s) 323, 464, 1403
BstAPI GCANNNNNTGC 1 cut(s) 728
BstAUI TGTACA 1 cut(s) 2100
BstBI TTCGAA 2 cut(s) 1023, 1487
BstC8I GCNNGC 3 cut(s) 484, 1618, 1942
BstDEI CTNAG 8 cut(s) 34, 522, 608, 822, 1241, 1330, 1892, 1897
BstDSI CCRYGG 2 cut(s) 1537, 1575
BstF5I GGATG 1 cut(s) 1843
BstFNI CGCG 2 cut(s) 219, 242
BstH2I RGCGCY 2 cut(s) 156, 326
BstHHI GCGC 3 cut(s) 155, 325, 1909
BstKTI GATC 9 cut(s) 478, 490, 599, 753, 991, 1006, 1230, 1690, 1860
BstMAI GTCTC 1 cut(s) 558
BstMBI GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 6 cut(s) 44, 363, 372, 728, 737, 1870
BstPAI GACNNNNGTC 1 cut(s) 467
BstSFI CTRYAG 1 cut(s) 196
BstUI CGCG 2 cut(s) 219, 242
BstV1I GCAGC 4 cut(s) 142, 706, 1226, 1778
BstX2I RGATCY 3 cut(s) 475, 596, 988
BstYI RGATCY 3 cut(s) 475, 596, 988
BsuRI GGCC 4 cut(s) 306, 375, 1038, 1864
BtgI CCRYGG 2 cut(s) 1537, 1575
BtgZI GCGATG 1 cut(s) 762
BtrI CACGTC 1 cut(s) 166
BtsCI GGATG 1 cut(s) 1843
BtsI GCAGTG 1 cut(s) 438
BtsIMutI CAGTG 1 cut(s) 438
Cac8I GCNNGC 3 cut(s) 484, 1618, 1942
CaiI CAGNNNCTG 1 cut(s) 1201
CfoI GCGC 3 cut(s) 155, 325, 1909
Cfr10I RCCGGY 1 cut(s) 482
Cfr13I GGNCC 1 cut(s) 1037
CseI GACGC 2 cut(s) 1392, 1879
Csp6I GTAC 5 cut(s) 418, 1054, 1210, 1381, 2101
CviAII CATG 7 cut(s) 491, 667, 759, 1315, 1576, 1585, 1717
CviQI GTAC 5 cut(s) 418, 1054, 1210, 1381, 2101
DdeI CTNAG 8 cut(s) 34, 522, 608, 822, 1241, 1330, 1892, 1897
DinI GGCGCC 1 cut(s) 324
DpnI GATC 9 cut(s) 477, 489, 598, 752, 990, 1005, 1229, 1689, 1859
DpnII GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
DrdI GACNNNNNNGTC 1 cut(s) 179
DseDI GACNNNNNNGTC 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 1575
Eco147I AGGCCT 1 cut(s) 1864
Eco32I GATATC 1 cut(s) 1459
Eco47III AGCGCT 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 1223
Eco88I CYCGRG 1 cut(s) 845
EcoRI GAATTC 1 cut(s) 1019
EcoRV GATATC 1 cut(s) 1459
EcoT14I CCWWGG 1 cut(s) 1575
EgeI GGCGCC 1 cut(s) 324
EheI GGCGCC 1 cut(s) 324
ErhI CCWWGG 1 cut(s) 1575
FaeI CATG 7 cut(s) 494, 670, 762, 1318, 1579, 1588, 1720
FaqI GGGAC 2 cut(s) 573, 1045
FatI CATG 7 cut(s) 490, 666, 758, 1314, 1575, 1584, 1716
FauI CCCGC 1 cut(s) 487
FauNDI CATATG 1 cut(s) 1159
FblI GTMKAC 2 cut(s) 123, 1237
Fnu4HI GCNGC 6 cut(s) 156, 364, 720, 1215, 1767, 1910
FokI GGATG 1 cut(s) 1830
Fsp4HI GCNGC 6 cut(s) 156, 364, 720, 1215, 1767, 1910
FspBI CTAG 2 cut(s) 1191, 1617
GlaI GCGC 3 cut(s) 154, 324, 1908
GluI GCNGC 6 cut(s) 156, 364, 720, 1215, 1767, 1910
GsuI CTGGAG 1 cut(s) 1941
HaeII RGCGCY 2 cut(s) 156, 326
HaeIII GGCC 4 cut(s) 306, 375, 1038, 1864
HapII CCGG 4 cut(s) 231, 483, 1407, 1980
HgaI GACGC 2 cut(s) 1392, 1879
HhaI GCGC 3 cut(s) 155, 325, 1909
Hin1I GRCGYC 3 cut(s) 323, 464, 1403
Hin1II CATG 7 cut(s) 494, 670, 762, 1318, 1579, 1588, 1720
Hin6I GCGC 3 cut(s) 153, 323, 1907
HinP1I GCGC 3 cut(s) 153, 323, 1907
HincII GTYRAC 5 cut(s) 124, 508, 1000, 1238, 1534
HindII GTYRAC 5 cut(s) 124, 508, 1000, 1238, 1534
HindIII AAGCTT 3 cut(s) 1100, 1327, 1357
HinfI GANTC 9 cut(s) 141, 404, 412, 580, 590, 848, 1334, 1484, 2015
HpaII CCGG 4 cut(s) 231, 483, 1407, 1980
HphI GGTGA 7 cut(s) 136, 241, 259, 712, 1594, 1994, 2047
Hpy188I TCNGA 4 cut(s) 140, 453, 1008, 1999
Hpy188III TCNNGA 7 cut(s) 594, 821, 852, 1191, 1407, 1592, 1847
Hpy99I CGWCG 4 cut(s) 125, 128, 167, 1873
HpyAV CCTTC 8 cut(s) 23, 85, 217, 322, 645, 946, 1198, 1875
HpyCH4III ACNGT 4 cut(s) 128, 1561, 1640, 2052
HpyCH4IV ACGT 2 cut(s) 165, 464
HpyCH4V TGCA 9 cut(s) 47, 169, 299, 338, 691, 722, 745, 1261, 1450
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 363, 372, 728, 737, 1870
HpyF3I CTNAG 8 cut(s) 34, 522, 608, 822, 1241, 1330, 1892, 1897
HpySE526I ACGT 2 cut(s) 165, 464
Hsp92I GRCGYC 3 cut(s) 323, 464, 1403
Hsp92II CATG 7 cut(s) 494, 670, 762, 1318, 1579, 1588, 1720
HspAI GCGC 3 cut(s) 153, 323, 1907
KasI GGCGCC 1 cut(s) 322
Kpn2I TCCGGA 1 cut(s) 1406
KroI GCCGGC 1 cut(s) 482
KroNI GCCGGC 1 cut(s) 484
Kzo9I GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
LmnI GCTCC 3 cut(s) 823, 1594, 1735
Lsp1109I GCAGC 4 cut(s) 142, 706, 1226, 1778
LweI GCATC 5 cut(s) 96, 103, 870, 1255, 1920
MaeI CTAG 2 cut(s) 1191, 1617
MaeII ACGT 2 cut(s) 165, 464
MaeIII GTNAC 7 cut(s) 460, 526, 584, 613, 1600, 1987, 2030
MalI GATC 9 cut(s) 477, 489, 598, 752, 990, 1005, 1229, 1689, 1859
MboI GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
MboII GAAGA 8 cut(s) 8, 11, 961, 998, 1439, 1910, 2055, 2070
MflI RGATCY 3 cut(s) 475, 596, 988
MhlI GDGCHC 1 cut(s) 1843
Mly113I GGCGCC 1 cut(s) 323
MlyI GAGTC 4 cut(s) 135, 413, 857, 2024
MmeI TCCRAC 2 cut(s) 163, 1461
MreI CGCCGGCG 1 cut(s) 482
MroI TCCGGA 1 cut(s) 1406
MroNI GCCGGC 1 cut(s) 482
MseI TTAA 4 cut(s) 56, 1170, 2021, 2110
MspA1I CMGCKG 1 cut(s) 1769
MspI CCGG 4 cut(s) 231, 483, 1407, 1980
Mva1269I GAATGC 1 cut(s) 799
MvnI CGCG 2 cut(s) 219, 242
MwoI GCNNNNNNNGC 6 cut(s) 44, 363, 372, 728, 737, 1870
NaeI GCCGGC 1 cut(s) 484
NarI GGCGCC 1 cut(s) 323
NcoI CCATGG 1 cut(s) 1575
NdeI CATATG 1 cut(s) 1159
NdeII GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
NgoMIV GCCGGC 1 cut(s) 482
NheI GCTAGC 1 cut(s) 1616
NlaIII CATG 7 cut(s) 494, 670, 762, 1318, 1579, 1588, 1720
NlaIV GGNNCC 5 cut(s) 324, 598, 1277, 1573, 1590
NmuCI GTSAC 2 cut(s) 460, 1600
NspV TTCGAA 2 cut(s) 1023, 1487
PceI AGGCCT 1 cut(s) 1864
PctI GAATGC 1 cut(s) 799
PdiI GCCGGC 1 cut(s) 484
PfeI GAWTC 5 cut(s) 412, 580, 590, 1334, 1484
PkrI GCNGC 6 cut(s) 157, 365, 721, 1216, 1768, 1911
PleI GAGTC 4 cut(s) 135, 412, 856, 2023
PluTI GGCGCC 1 cut(s) 326
PpsI GAGTC 4 cut(s) 135, 412, 856, 2023
PshAI GACNNNNGTC 1 cut(s) 467
PspN4I GGNNCC 5 cut(s) 324, 598, 1277, 1573, 1590
PspPI GGNCC 1 cut(s) 1037
PstNI CAGNNNCTG 1 cut(s) 1201
PsuI RGATCY 3 cut(s) 475, 596, 988
PvuII CAGCTG 1 cut(s) 1769
RsaI GTAC 5 cut(s) 419, 1055, 1211, 1382, 2102
RsaNI GTAC 5 cut(s) 418, 1054, 1210, 1381, 2101
SalI GTCGAC 2 cut(s) 122, 1236
SaqAI TTAA 4 cut(s) 56, 1170, 2021, 2110
SatI GCNGC 6 cut(s) 156, 364, 720, 1215, 1767, 1910
Sau3AI GATC 9 cut(s) 475, 487, 596, 750, 988, 1003, 1227, 1687, 1857
Sau96I GGNCC 1 cut(s) 1037
SchI GAGTC 4 cut(s) 135, 413, 857, 2024
SduI GDGCHC 1 cut(s) 1843
SfaNI GCATC 5 cut(s) 96, 103, 870, 1255, 1920
SfcI CTRYAG 1 cut(s) 196
SfoI GGCGCC 1 cut(s) 324
SfuI TTCGAA 2 cut(s) 1023, 1487
SgrAI CRCCGGYG 1 cut(s) 482
SgrDI CGTCGACG 1 cut(s) 122
SmlI CTYRAG 1 cut(s) 1392
SmoI CTYRAG 1 cut(s) 1392
SseBI AGGCCT 1 cut(s) 1864
SsiI CCGC 6 cut(s) 217, 242, 363, 480, 1910, 2067
SspDI GGCGCC 1 cut(s) 322
SspMI CTAG 2 cut(s) 1191, 1617
StuI AGGCCT 1 cut(s) 1864
StyI CCWWGG 1 cut(s) 1575
TaaI ACNGT 4 cut(s) 128, 1561, 1640, 2052
TaiI ACGT 2 cut(s) 168, 467
TaqII GACCGA 1 cut(s) 173
TatI WGTACW 1 cut(s) 2100
TauI GCSGC 2 cut(s) 366, 1912
TfiI GAWTC 5 cut(s) 412, 580, 590, 1334, 1484
Tru1I TTAA 4 cut(s) 56, 1170, 2021, 2110
Tru9I TTAA 4 cut(s) 56, 1170, 2021, 2110
TscAI CASTG 1 cut(s) 438
TseFI GTSAC 2 cut(s) 460, 1600
TseI GCWGC 4 cut(s) 155, 719, 1214, 1766
Tsp45I GTSAC 2 cut(s) 460, 1600
TspDTI ATGAA 5 cut(s) 645, 928, 999, 1303, 2034
TspRI CASTG 1 cut(s) 438
XapI RAATTY 3 cut(s) 256, 1019, 1489
XbaI TCTAGA 1 cut(s) 1190
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 1582
XmiI GTMKAC 2 cut(s) 123, 1237
XspI CTAG 2 cut(s) 1191, 1617
ZraI GACGTC 1 cut(s) 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.