pycom03g18100

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
19142158 .. 19144613
2456 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g18100.1

Sequence Viewer

Length: 2280 bp
ATGACAAACATTTGTCCAAGCTTATTACAAATCCTGAGTCTCCATCTCTCTCCCAAAATGCTTACCACCATGATCAGTGCATCAACACTCCGATCGCAAAAGCTTCACTTCCTACTTGTTTTCTTCTTTCTCTTAACCCCTTCTGTAACTCCATTAAACTTCAGCTTCCCCAGCTTCAGTAGCGATGACTCCGCTAAAATATCTACAGAGGGCGATGCTCATTGGCTACGCCCCTCCCTCCGCCTCACACGAGACGCCTCAGACGTGGCAAAGAACGACAGCGTGGGGAGAGCCACCTACCGCCAATCGTTCCTCCTTCAGGAAAAGGCAACCGGCAAACTCGCCGATTTCACCACCAGTTTCGACTTCGCCATTAACTCCATGAACGAACCCGTCGCCGGTGACGGTCTCGCCTTCTTCATAGCTCCATATGGTTCCGTCCTCAACTCCACACTAGGCAATGGTGGCAGTCTCGGCCTGCCTTTCAACTCCACACCTTCAGATGACTTCGTCCTGAGGAATCAGTACCCTTTTGTGGCTGTGGAGTTTGACATATTCTACTATAATGAGCTGACAACCATCGACGACCCCAAGTACGAACACGTGGGGATTGATGTCAACTCTCTCAACTCTTCCAGATTGGAGCGTTGGGATGGAGGTATTGCGGAAGGAATTCCAAATAGGGCTACCATTACTTATAATTCCTCCTCGAAAAATCTTAGTGTTGCCTTCACTACTTTCGTAACGAGTGATCACAATGTTCCCCGCCAAAAGATGAGATATTTTTATTACATTGTTGATCTGAAGCATTACTTGCCCGATCGGGTCGTTGTTGGGTTTTCCGCTTCAACCGGTGAATGTTTTGCCATACATAAGATCATCTCGTGGAATTTCACTTCCACTTCACTTGATGATCACCACGAGGCCAATACTGCATCACCACCGCTGCCGGTTGCAGTTCCTGTATCAAGCCCCATGGCTAGTCCTACCTATCCTCCCAAGACAGTAAATAAGCCTATTGGACTAGAAATTGGGTTGGGAATTGGAGGATGTGCTGTCGTCGTTACTGGGTTGGGTTTGGTTTGGTTCTTTTTGTGGAAGAGGAGGGAAACAGGAGAAAGTAGTGATGAAGATACCATGGTTCATGAATTGGTTGACGAAGAATTTGAAAAAGGGGCTTGTCCCAGGAAGTTTTCATATAGGGAATTGGCTCGGGCGACGAATAATTTTGGGCAGGAAGAAAAGCTTGGAGAGGGAGGATTTGGTGGGGTTTATAAAGGCATAATACCAGACTTGAAGTCACCTGTTGCTGTTAAGAGGATATCGAAGGGTTCTAAACAAGGACCGAAGGAGTATGCCTCGGAAGTGAAGACAATTAGTCGACTTAGGCATCGCAATCTTGTTCAACTGATTGGATGGTGCCACGAAAAAAAATTTCTACTTGTGTACGAGTTCATGCCCAAAGGCAGCTTAGACTCTCATTTGTTCAAAGAACAAAGCTTGTTAACTTGGGAGGCAAGATACAAAATTGCTCAAGGCTTGGCCTCTGGGTTGTTGTACCTACACCAAGAATGGGAGCAATGTGTGCTGCATAGGGATATCAAGTCCAGCAATGTTATGTTGGATGCGAATTTCAACGCAAAACTTGGGGATTTTGGGTTAGCAAGGCTTGTGGACCACGGACAAGAGCCACAAACGACAGCATTGGCTGGAACCATGGGTTACATGGCTCCCGAATATGTTATCACGGGAAAGGCTAGCAAGGAATCTGATGTCTACAGCTTTGGAATTGTTGCTTTGGAGATTTGTTGCGGAAGAAAACCTATCGACCCAAAGTTCGGAAGTAGTAAAGTCAATATGGTAGAGTGGGTTTGGGAGCTTTATGGAGAAGAGAAAGTAATTGAAGCAGCTGACCCGAAATTGTGTGGAGATTTTGATGAGAAACAAATGGAGTGCCTGATGATTGTTGGCTTGTGGTGTGCTCATCCGGACAACAATATGAGGCCTTCAATACAACAAGCCATTCAAGTGCTCAACTTTGAGGTTCCATTGCCGAATCTCCCATCAAATATGCCGGTGGCCACGTACTTTGCTCCTTCGAGATCGCTCTCAAAGTTGTCTGGTGGTGCTTCTAGTTCTCAAGGAGGGCAAACTGAATGTTCAGGCTATGCCTACAACATCAATTCCGCGGAGTTCACAGGATCTTCTTCTGCAACAAATTCTCATCCATCAGTCTCACTTGGGTCTAAATGTGATAATTCGATGAGAAATTACGATTGA

Protein Analysis

760

Amino Acids

83.82

Weight (kDa)

5.89

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 52 - 309 5.2e-58 Legume lectin domain
Pkinase PF00069 412 - 676 3.2e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 413 - 675 1.7e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 699, 1275
AccB1I GGYRCC 1 cut(s) 1419
AccI GTMKAC 2 cut(s) 1381, 1776
AccII CGCG 1 cut(s) 2189
AccIII TCCGGA 1 cut(s) 1987
AclWI GGATC 1 cut(s) 2209
AcoI YGGCCR 1 cut(s) 2079
AcsI RAATTY 6 cut(s) 672, 889, 1163, 1433, 1630, 2218
AcuI CTGAAG 5 cut(s) 145, 160, 302, 483, 824
AcvI CACGTG 1 cut(s) 604
AcyI GRCGYC 1 cut(s) 255
AfaI GTAC 5 cut(s) 527, 596, 1448, 1559, 2087
AfiI CCNNNNNNNGG 5 cut(s) 319, 398, 535, 1573, 1838
AflIII ACRYGT 1 cut(s) 601
AgeI ACCGGT 1 cut(s) 851
AhdI GACNNNNNGTC 2 cut(s) 1297, 1377
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 1 cut(s) 1184
AjuI GAANNNNNNNTTGG 2 cut(s) 1230, 1262
Alw21I GWGCWC 2 cut(s) 1984, 2034
Alw26I GTCTC 5 cut(s) 44, 246, 413, 476, 2239
AlwI GGATC 1 cut(s) 2209
AlwNI CAGNNNCTG 1 cut(s) 962
Ama87I CYCGRG 1 cut(s) 1212
Aor13HI TCCGGA 1 cut(s) 1987
AoxI GGCC 5 cut(s) 475, 924, 1542, 2003, 2079
ApeKI GCWGC 4 cut(s) 946, 1467, 1588, 1907
ApoI RAATTY 6 cut(s) 672, 889, 1163, 1433, 1630, 2218
ArsI GACNNNNNNTTYG 6 cut(s) 22, 54, 1148, 1180, 1820, 1852
AsiGI ACCGGT 1 cut(s) 851
Asp700I GAANNNNTTC 1 cut(s) 672
AspS9I GGNCC 2 cut(s) 1343, 1675
AsuHPI GGTGA 6 cut(s) 343, 413, 866, 908, 930, 1293
AsuNHI GCTAGC 1 cut(s) 1757
AvaI CYCGRG 1 cut(s) 1212
AvaII GGWCC 2 cut(s) 1343, 1675
AxyI CCTNAGG 1 cut(s) 515
BaeI ACNNNNGTAYC 2 cut(s) 1125, 1158
BalI TGGCCA 1 cut(s) 2081
BanI GGYRCC 1 cut(s) 1419
BauI CACGAG 3 cut(s) 249, 883, 920
BbrPI CACGTG 1 cut(s) 604
BbsI GAAGAC 1 cut(s) 1376
Bbv12I GWGCWC 2 cut(s) 1984, 2034
BbvI GCAGC 4 cut(s) 933, 1479, 1575, 1919
BccI CCATC 6 cut(s) 51, 587, 647, 1410, 2071, 2236
BciT130I CCWGG 1 cut(s) 1186
BclI TGATCA 3 cut(s) 72, 751, 913
BcoDI GTCTC 5 cut(s) 44, 246, 413, 476, 2239
BfaI CTAG 5 cut(s) 455, 981, 1025, 1758, 2133
BfmI CTRYAG 2 cut(s) 204, 1777
BisI GCNGC 4 cut(s) 947, 1468, 1589, 1908
BlsI GCNGC 4 cut(s) 948, 1469, 1590, 1909
Bme1390I CCNGG 1 cut(s) 1186
Bme18I GGWCC 2 cut(s) 1343, 1675
BmeRI GACNNNNNGTC 2 cut(s) 1297, 1377
BmeT110I CYCGRG 1 cut(s) 1212
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 2 cut(s) 1343, 1675
BmiI GGNNCC 5 cut(s) 436, 1421, 1714, 1731, 2046
BmrFI CCNGG 1 cut(s) 1186
BmrI ACTGGG 1 cut(s) 1077
BmsI GCATC 5 cut(s) 89, 205, 944, 1399, 1615
BmtI GCTAGC 1 cut(s) 1761
BmuI ACTGGG 1 cut(s) 1077
BpiI GAAGAC 1 cut(s) 1376
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
BpuEI CTTGAG 2 cut(s) 1518, 2124
BsaAI YACGTR 2 cut(s) 604, 2085
BsaHI GRCGYC 1 cut(s) 255
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 7 cut(s) 975, 1137, 1184, 1359, 1678, 1716, 2187
BsaWI WCCGGW 2 cut(s) 851, 1987
BsaXI ACNNNNNCTCC 2 cut(s) 979, 1009
Bsc4I CCNNNNNNNGG 5 cut(s) 319, 398, 535, 1573, 1838
Bse118I RCCGGY 5 cut(s) 332, 398, 851, 949, 2074
Bse1I ACTGG 2 cut(s) 357, 1072
Bse21I CCTNAGG 1 cut(s) 515
Bse3DI GCAATG 4 cut(s) 466, 1586, 1618, 2048
BseAI TCCGGA 1 cut(s) 1987
BseBI CCWGG 1 cut(s) 1186
BseDI CCNNGG 7 cut(s) 975, 1137, 1184, 1359, 1678, 1716, 2187
BseGI GGATG 6 cut(s) 658, 1055, 1421, 1630, 1984, 2224
BseLI CCNNNNNNNGG 5 cut(s) 319, 398, 535, 1573, 1838
BseMI GCAATG 4 cut(s) 466, 1586, 1618, 2048
BseMII CTCAG 3 cut(s) 26, 273, 506
BseNI ACTGG 2 cut(s) 357, 1072
BseRI GAGGAG 2 cut(s) 697, 1117
BseXI GCAGC 4 cut(s) 933, 1479, 1575, 1919
BseYI CCCAGC 1 cut(s) 170
Bsh1236I CGCG 1 cut(s) 2189
Bsh1285I CGRYCG 2 cut(s) 95, 823
BshFI GGCC 5 cut(s) 477, 926, 1544, 2005, 2081
BshNI GGYRCC 1 cut(s) 1419
BshTI ACCGGT 1 cut(s) 851
BsiEI CGRYCG 2 cut(s) 95, 823
BsiHKAI GWGCWC 2 cut(s) 1984, 2034
BsiHKCI CYCGRG 1 cut(s) 1212
BsiSI CCGG 6 cut(s) 333, 399, 852, 950, 1988, 2075
BslFI GGGAC 1 cut(s) 1167
BslI CCNNNNNNNGG 5 cut(s) 319, 398, 535, 1573, 1838
BsmAI GTCTC 5 cut(s) 44, 246, 413, 476, 2239
BsmBI CGTCTC 1 cut(s) 246
BsmFI GGGAC 1 cut(s) 1167
BsnI GGCC 5 cut(s) 477, 926, 1544, 2005, 2081
Bso31I GGTCTC 1 cut(s) 413
BsoBI CYCGRG 1 cut(s) 1212
Bsp1286I GDGCHC 2 cut(s) 1984, 2034
Bsp13I TCCGGA 1 cut(s) 1987
Bsp143I GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
Bsp19I CCATGG 3 cut(s) 975, 1137, 1716
BspANI GGCC 5 cut(s) 477, 926, 1544, 2005, 2081
BspCNI CTCAG 3 cut(s) 27, 272, 507
BspEI TCCGGA 1 cut(s) 1987
BspFNI CGCG 1 cut(s) 2189
BspHI TCATGA 1 cut(s) 1144
BspLI GGNNCC 5 cut(s) 436, 1421, 1714, 1731, 2046
BspOI GCTAGC 1 cut(s) 1761
BspPI GGATC 1 cut(s) 2209
BspT107I GGYRCC 1 cut(s) 1419
BspTNI GGTCTC 1 cut(s) 413
BsrDI GCAATG 4 cut(s) 466, 1586, 1618, 2048
BsrFI RCCGGY 5 cut(s) 332, 398, 851, 949, 2074
BsrI ACTGG 2 cut(s) 357, 1072
BssAI RCCGGY 5 cut(s) 332, 398, 851, 949, 2074
BssECI CCNNGG 7 cut(s) 975, 1137, 1184, 1359, 1678, 1716, 2187
BssMI GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
BssNI GRCGYC 1 cut(s) 255
BssSI CACGAG 3 cut(s) 249, 883, 920
BssT1I CCWWGG 3 cut(s) 975, 1137, 1716
Bst2BI CACGAG 3 cut(s) 249, 883, 920
Bst2UI CCWGG 1 cut(s) 1186
Bst4CI ACNGT 2 cut(s) 407, 1006
Bst6I CTCTTC 3 cut(s) 637, 1094, 1884
BstACI GRCGYC 1 cut(s) 255
BstAPI GCANNNNNTGC 2 cut(s) 814, 1585
BstBAI YACGTR 2 cut(s) 604, 2085
BstC8I GCNNGC 2 cut(s) 479, 1759
BstDEI CTNAG 6 cut(s) 35, 259, 515, 719, 1385, 1471
BstDSI CCRYGG 5 cut(s) 975, 1137, 1678, 1716, 2187
BstENI CCTNNNNNAGG 1 cut(s) 317
BstF5I GGATG 6 cut(s) 658, 1055, 1421, 1630, 1984, 2224
BstFNI CGCG 1 cut(s) 2189
BstKTI GATC 9 cut(s) 75, 95, 754, 802, 823, 879, 916, 2105, 2204
BstMAI GTCTC 5 cut(s) 44, 246, 413, 476, 2239
BstMBI GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
BstMCI CGRYCG 2 cut(s) 95, 823
BstMWI GCNNNNNNNGC 7 cut(s) 171, 180, 465, 474, 814, 932, 1585
BstNI CCWGG 1 cut(s) 1186
BstSCI CCNGG 1 cut(s) 1184
BstSFI CTRYAG 2 cut(s) 204, 1777
BstUI CGCG 1 cut(s) 2189
BstV1I GCAGC 4 cut(s) 933, 1479, 1575, 1919
BstV2I GAAGAC 1 cut(s) 1376
BstX2I RGATCY 1 cut(s) 2201
BstYI RGATCY 1 cut(s) 2201
Bsu36I CCTNAGG 1 cut(s) 515
BsuRI GGCC 5 cut(s) 477, 926, 1544, 2005, 2081
BtgI CCRYGG 5 cut(s) 975, 1137, 1678, 1716, 2187
BtgZI GCGATG 3 cut(s) 198, 228, 1376
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 6 cut(s) 658, 1055, 1421, 1630, 1984, 2224
BtsIMutI CAGTG 1 cut(s) 82
Cac8I GCNNGC 2 cut(s) 479, 1759
CaiI CAGNNNCTG 1 cut(s) 962
CciI TCATGA 1 cut(s) 1144
Cfr10I RCCGGY 5 cut(s) 332, 398, 851, 949, 2074
Cfr13I GGNCC 2 cut(s) 1343, 1675
Cfr42I CCGCGG 1 cut(s) 2190
CseI GACGC 1 cut(s) 263
Csp6I GTAC 5 cut(s) 526, 595, 1447, 1558, 2086
CspAI ACCGGT 1 cut(s) 851
CspCI CAANNNNNGTGG 6 cut(s) 889, 924, 1653, 1688, 2071, 2106
CviAII CATG 8 cut(s) 70, 382, 976, 1138, 1145, 1456, 1717, 1726
CviQI GTAC 5 cut(s) 526, 595, 1447, 1558, 2086
DdeI CTNAG 6 cut(s) 35, 259, 515, 719, 1385, 1471
DpnI GATC 9 cut(s) 74, 94, 753, 801, 822, 878, 915, 2104, 2203
DpnII GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
DriI GACNNNNNGTC 2 cut(s) 1297, 1377
EaeI YGGCCR 1 cut(s) 2079
Eam1104I CTCTTC 3 cut(s) 637, 1094, 1884
Eam1105I GACNNNNNGTC 2 cut(s) 1297, 1377
EarI CTCTTC 3 cut(s) 637, 1094, 1884
EciI GGCGGA 1 cut(s) 230
Eco130I CCWWGG 3 cut(s) 975, 1137, 1716
Eco147I AGGCCT 1 cut(s) 2005
Eco31I GGTCTC 1 cut(s) 413
Eco32I GATATC 2 cut(s) 1323, 1600
Eco47I GGWCC 2 cut(s) 1343, 1675
Eco57I CTGAAG 5 cut(s) 145, 160, 302, 483, 824
Eco72I CACGTG 1 cut(s) 604
Eco81I CCTNAGG 1 cut(s) 515
Eco88I CYCGRG 1 cut(s) 1212
EcoNI CCTNNNNNAGG 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 672
EcoRII CCWGG 1 cut(s) 1184
EcoRV GATATC 2 cut(s) 1323, 1600
EcoT14I CCWWGG 3 cut(s) 975, 1137, 1716
ErhI CCWWGG 3 cut(s) 975, 1137, 1716
Esp3I CGTCTC 1 cut(s) 246
FaeI CATG 8 cut(s) 73, 385, 979, 1141, 1148, 1459, 1720, 1729
FalI AAGNNNNNCTT 6 cut(s) 92, 124, 797, 829, 1230, 1262
FaqI GGGAC 1 cut(s) 1167
FatI CATG 8 cut(s) 69, 381, 975, 1137, 1144, 1455, 1716, 1725
FauI CCCGC 1 cut(s) 773
FauNDI CATATG 1 cut(s) 430
FbaI TGATCA 3 cut(s) 72, 751, 913
FblI GTMKAC 2 cut(s) 1381, 1776
Fnu4HI GCNGC 4 cut(s) 947, 1468, 1589, 1908
FokI GGATG 6 cut(s) 665, 1062, 1428, 1637, 1971, 2211
Fsp4HI GCNGC 4 cut(s) 947, 1468, 1589, 1908
FspBI CTAG 5 cut(s) 455, 981, 1025, 1758, 2133
GluI GCNGC 4 cut(s) 947, 1468, 1589, 1908
GsaI CCCAGC 1 cut(s) 174
HaeIII GGCC 5 cut(s) 477, 926, 1544, 2005, 2081
HapII CCGG 6 cut(s) 333, 399, 852, 950, 1988, 2075
HgaI GACGC 1 cut(s) 263
Hin1I GRCGYC 1 cut(s) 255
Hin1II CATG 8 cut(s) 73, 385, 979, 1141, 1148, 1459, 1720, 1729
HincII GTYRAC 4 cut(s) 619, 1156, 1382, 1506
HindII GTYRAC 4 cut(s) 619, 1156, 1382, 1506
HindIII AAGCTT 4 cut(s) 19, 101, 1244, 1498
HinfI GANTC 6 cut(s) 37, 188, 520, 1475, 1766, 2056
HpaI GTTAAC 1 cut(s) 1506
HpaII CCGG 6 cut(s) 333, 399, 852, 950, 1988, 2075
HphI GGTGA 6 cut(s) 343, 413, 866, 908, 930, 1293
Hpy166II GTNNAC 8 cut(s) 619, 1156, 1382, 1447, 1506, 1675, 1777, 2196
Hpy188I TCNGA 7 cut(s) 92, 262, 502, 804, 1363, 1771, 1841
Hpy188III TCNNGA 8 cut(s) 34, 320, 514, 636, 1145, 1733, 1988, 2100
Hpy8I GTNNAC 8 cut(s) 619, 1156, 1382, 1447, 1506, 1675, 1777, 2196
Hpy99I CGWCG 4 cut(s) 398, 587, 1064, 1222
HpyCH4III ACNGT 2 cut(s) 407, 1006
HpyCH4IV ACGT 3 cut(s) 264, 603, 2084
HpyCH4V TGCA 5 cut(s) 80, 935, 956, 1591, 2213
HpyF10VI GCNNNNNNNGC 7 cut(s) 171, 180, 465, 474, 814, 932, 1585
HpyF3I CTNAG 6 cut(s) 35, 259, 515, 719, 1385, 1471
HpySE526I ACGT 3 cut(s) 264, 603, 2084
Hsp92I GRCGYC 1 cut(s) 255
Hsp92II CATG 8 cut(s) 73, 385, 979, 1141, 1148, 1459, 1720, 1729
Kpn2I TCCGGA 1 cut(s) 1987
Ksp22I TGATCA 3 cut(s) 72, 751, 913
KspAI GTTAAC 1 cut(s) 1506
KspI CCGCGG 1 cut(s) 2190
Kzo9I GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
LmnI GCTCC 6 cut(s) 430, 643, 1576, 1735, 1876, 2098
Lsp1109I GCAGC 4 cut(s) 933, 1479, 1575, 1919
LweI GCATC 5 cut(s) 89, 205, 944, 1399, 1615
MaeI CTAG 5 cut(s) 455, 981, 1025, 1758, 2133
MaeII ACGT 3 cut(s) 264, 603, 2084
MaeIII GTNAC 6 cut(s) 145, 401, 742, 1063, 1299, 1721
MalI GATC 9 cut(s) 74, 94, 753, 801, 822, 878, 915, 2104, 2203
MboI GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
MflI RGATCY 1 cut(s) 2201
MhlI GDGCHC 2 cut(s) 1984, 2034
MlsI TGGCCA 1 cut(s) 2081
MluNI TGGCCA 1 cut(s) 2081
MlyI GAGTC 3 cut(s) 46, 182, 1469
MmeI TCCRAC 1 cut(s) 1602
Mox20I TGGCCA 1 cut(s) 2081
MroI TCCGGA 1 cut(s) 1987
MroXI GAANNNNTTC 1 cut(s) 672
MscI TGGCCA 1 cut(s) 2081
MseI TTAA 5 cut(s) 134, 155, 375, 1314, 1505
MslI CAYNNNNRTG 1 cut(s) 2027
Msp20I TGGCCA 1 cut(s) 2081
MspA1I CMGCKG 3 cut(s) 946, 1910, 2189
MspI CCGG 6 cut(s) 333, 399, 852, 950, 1988, 2075
MspR9I CCNGG 1 cut(s) 1186
MvaI CCWGG 1 cut(s) 1186
MvnI CGCG 1 cut(s) 2189
MwoI GCNNNNNNNGC 7 cut(s) 171, 180, 465, 474, 814, 932, 1585
NcoI CCATGG 3 cut(s) 975, 1137, 1716
NdeI CATATG 1 cut(s) 430
NdeII GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
NheI GCTAGC 1 cut(s) 1757
NlaIII CATG 8 cut(s) 73, 385, 979, 1141, 1148, 1459, 1720, 1729
NlaIV GGNNCC 5 cut(s) 436, 1421, 1714, 1731, 2046
NmeAIII GCCGAG 1 cut(s) 453
NmuCI GTSAC 2 cut(s) 401, 1299
PagI TCATGA 1 cut(s) 1144
PceI AGGCCT 1 cut(s) 2005
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 672
PfeI GAWTC 3 cut(s) 520, 1766, 2056
PflFI GACNNNGTC 1 cut(s) 509
PinAI ACCGGT 1 cut(s) 851
PkrI GCNGC 4 cut(s) 948, 1469, 1590, 1909
Ple19I CGATCG 2 cut(s) 95, 823
PleI GAGTC 3 cut(s) 45, 182, 1469
PmaCI CACGTG 1 cut(s) 604
PmlI CACGTG 1 cut(s) 604
PpsI GAGTC 3 cut(s) 45, 182, 1469
Ppu21I YACGTR 2 cut(s) 604, 2085
PsiI TTATAA 2 cut(s) 699, 1275
Psp6I CCWGG 1 cut(s) 1184
PspCI CACGTG 1 cut(s) 604
PspFI CCCAGC 1 cut(s) 170
PspGI CCWGG 1 cut(s) 1184
PspN4I GGNNCC 5 cut(s) 436, 1421, 1714, 1731, 2046
PspPI GGNCC 2 cut(s) 1343, 1675
PstNI CAGNNNCTG 1 cut(s) 962
PsuI RGATCY 1 cut(s) 2201
PsyI GACNNNGTC 1 cut(s) 509
PvuI CGATCG 2 cut(s) 95, 823
PvuII CAGCTG 1 cut(s) 1910
RsaI GTAC 5 cut(s) 527, 596, 1448, 1559, 2087
RsaNI GTAC 5 cut(s) 526, 595, 1447, 1558, 2086
RseI CAYNNNNRTG 1 cut(s) 2027
SacII CCGCGG 1 cut(s) 2190
SalI GTCGAC 1 cut(s) 1380
SaqAI TTAA 5 cut(s) 134, 155, 375, 1314, 1505
SatI GCNGC 4 cut(s) 947, 1468, 1589, 1908
Sau3AI GATC 9 cut(s) 72, 92, 751, 799, 820, 876, 913, 2102, 2201
Sau96I GGNCC 2 cut(s) 1343, 1675
SchI GAGTC 3 cut(s) 46, 182, 1469
ScrFI CCNGG 1 cut(s) 1186
SduI GDGCHC 2 cut(s) 1984, 2034
SfaNI GCATC 5 cut(s) 89, 205, 944, 1399, 1615
SfcI CTRYAG 2 cut(s) 204, 1777
Sfr303I CCGCGG 1 cut(s) 2190
SgrAI CRCCGGYG 1 cut(s) 398
SgrBI CCGCGG 1 cut(s) 2190
SinI GGWCC 2 cut(s) 1343, 1675
SmiMI CAYNNNNRTG 1 cut(s) 2027
SmlI CTYRAG 2 cut(s) 1533, 2139
SmoI CTYRAG 2 cut(s) 1533, 2139
SseBI AGGCCT 1 cut(s) 2005
SspMI CTAG 5 cut(s) 455, 981, 1025, 1758, 2133
StuI AGGCCT 1 cut(s) 2005
StyD4I CCNGG 1 cut(s) 1184
StyI CCWWGG 3 cut(s) 975, 1137, 1716
TaaI ACNGT 2 cut(s) 407, 1006
TaiI ACGT 3 cut(s) 267, 606, 2087
TaqI TCGA 8 cut(s) 363, 582, 710, 1325, 1381, 1827, 2099, 2261
TaqII GACCGA 1 cut(s) 1360
TfiI GAWTC 3 cut(s) 520, 1766, 2056
Tru1I TTAA 5 cut(s) 134, 155, 375, 1314, 1505
Tru9I TTAA 5 cut(s) 134, 155, 375, 1314, 1505
TscAI CASTG 1 cut(s) 82
TseFI GTSAC 2 cut(s) 401, 1299
TseI GCWGC 4 cut(s) 946, 1467, 1588, 1907
Tsp45I GTSAC 2 cut(s) 401, 1299
TspDTI ATGAA 7 cut(s) 398, 409, 1133, 1143, 1161, 1185, 1444
TspGWI ACGGA 2 cut(s) 427, 1695
TspRI CASTG 1 cut(s) 82
Tth111I GACNNNGTC 1 cut(s) 509
VpaK11BI GGWCC 2 cut(s) 1343, 1675
XagI CCTNNNNNAGG 1 cut(s) 317
XapI RAATTY 6 cut(s) 672, 889, 1163, 1433, 1630, 2218
XcmI CCANNNNNNNNNTGG 1 cut(s) 1723
XmiI GTMKAC 2 cut(s) 1381, 1776
XmnI GAANNNNTTC 1 cut(s) 672
XspI CTAG 5 cut(s) 455, 981, 1025, 1758, 2133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.