Rroxscaffold_1G00039980

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
57614874 .. 57615861
988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00039980.1

Sequence Viewer

Length: 918 bp
ATGGCTGTCACTAACAATTGTGGCAATGGGATCATGACACAGCTTCATGAGTATTCACTAAAGCAGCTTCAATTCCTTATTCTTCTCTTCTTTCTGCTAACCCCTTCTGCAACCTCAATAACCTTCAATCTCTCGAGCTTTTCCGGTGCAGACTCTATAATAACAGAGCAAGATGCTACTATCGACAAGCAAGTCCTCCGACTCACCAATAGTGCTGTAGATGAATCACAGGCGCAAAGCGTAGGCCGAGCCACATGGCAAGAACCCTTCCTCCTCCGCGAAATTGACACCGGAAAGCTTGCTGATTTTACAACACATTTCACCTTTGTCATCGATTCTCTACGGGAACCCGACTATGCAGACGGGCTAGTGTTCTTCATAGCGCCAAACGGATCCTTACTCAACACATCCCTCGGAGGAGGAGGAGGTGCCCTCGGGCCTCCTGTGGAAAACACGGCAGGAAATATTGGGTACAACTTTGTTGCAGTGGAGTTTGATATCTTCCAGAATACTCAACTATTCGTTGGCGATCCCACCGGCAACCATGTGGGTATCGACGTCAACTCTCTCAAGTCCTTGAACACCACGCCTTGGAATGGTAATATTACATATGGACAACACAATAGTGCTACGATGAACTATCTTTCTGACCAAGTTGATCTGATAGAGTACTTGCCCGACTTGGTCATTGTCGGGTTCTCTGCTGCGACTGGGGATAAGTTTGCTGTGCACAAGATCCTCTCATGGAATTTTACTTCTACTAACCTGACTATCCCAGGAGATGGGGTGATCCCAGGAAATGGGGTGAGTGTAGCACTAGTCGTTGGGTTGAGCATTGGTGGATTCATTATCTTGGTTGGTGGGTTGACATTGGTTTGGTTCATCTTTTGGAAGAAGAGGGGAAGGAGGGGAAAGTGA

Protein Analysis

305

Amino Acids

32.89

Weight (kDa)

4.81

Isoelectric Point (pI)

23.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 40 - 216 1.9e-37 Legume lectin domain
Lectin_legB PF00139 206 - 255 2e-10 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 191
AatII GACGTC 1 cut(s) 561
AccB1I GGYRCC 1 cut(s) 428
AccB7I CCANNNNNTGG 3 cut(s) 591, 782, 800
AccII CGCG 1 cut(s) 279
AciI CCGC 1 cut(s) 277
AclWI GGATC 6 cut(s) 38, 387, 400, 524, 730, 784
AcsI RAATTY 1 cut(s) 748
AcyI GRCGYC 1 cut(s) 558
AfaI GTAC 2 cut(s) 473, 671
AfiI CCNNNNNNNGG 4 cut(s) 591, 596, 782, 800
AgsI TTSAA 3 cut(s) 71, 127, 580
AhlI ACTAGT 1 cut(s) 817
AjnI CCWGG 2 cut(s) 775, 793
AleI CACNNNNGTG 1 cut(s) 624
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
AluBI AGCT 4 cut(s) 43, 67, 138, 298
AluI AGCT 4 cut(s) 43, 67, 138, 298
Alw21I GWGCWC 1 cut(s) 732
Alw44I GTGCAC 1 cut(s) 728
AlwI GGATC 6 cut(s) 38, 387, 400, 524, 730, 784
Ama87I CYCGRG 2 cut(s) 133, 434
AoxI GGCC 2 cut(s) 244, 437
ApaLI GTGCAC 1 cut(s) 728
ApeKI GCWGC 2 cut(s) 64, 704
ApoI RAATTY 1 cut(s) 748
AspLEI GCGC 2 cut(s) 235, 385
AspS9I GGNCC 1 cut(s) 437
AsuHPI GGTGA 4 cut(s) 196, 313, 799, 817
AvaI CYCGRG 2 cut(s) 133, 434
BaeGI GKGCMC 2 cut(s) 433, 732
BamHI GGATCC 1 cut(s) 392
BanI GGYRCC 1 cut(s) 428
Bbv12I GWGCWC 1 cut(s) 732
BbvI GCAGC 2 cut(s) 76, 691
BccI CCATC 1 cut(s) 776
BceAI ACGGC 1 cut(s) 471
BciT130I CCWGG 2 cut(s) 777, 795
BcuI ACTAGT 1 cut(s) 817
BfaI CTAG 2 cut(s) 368, 818
BfmI CTRYAG 1 cut(s) 216
BfoI RGCGCY 1 cut(s) 386
BisI GCNGC 2 cut(s) 65, 705
BlsI GCNGC 2 cut(s) 66, 706
BmcAI AGTACT 1 cut(s) 671
Bme1390I CCNGG 2 cut(s) 777, 795
BmeT110I CYCGRG 2 cut(s) 133, 434
BmgT120I GGNCC 1 cut(s) 437
BmiI GGNNCC 3 cut(s) 348, 394, 430
BmrFI CCNGG 2 cut(s) 777, 795
BmrI ACTGGG 1 cut(s) 720
BmsI GCATC 1 cut(s) 163
BmuI ACTGGG 1 cut(s) 720
BplI GAGNNNNNCTC 2 cut(s) 417, 449
BpuEI CTTGAG 1 cut(s) 554
Bsa29I ATCGAT 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 558
BsaJI CCNNGG 5 cut(s) 412, 433, 590, 775, 793
BsaWI WCCGGW 2 cut(s) 143, 290
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 771, 801
Bsc4I CCNNNNNNNGG 4 cut(s) 591, 596, 782, 800
Bse118I RCCGGY 1 cut(s) 536
Bse1I ACTGG 1 cut(s) 715
Bse3DI GCAATG 1 cut(s) 31
BseBI CCWGG 2 cut(s) 777, 795
BseCI ATCGAT 1 cut(s) 333
BseDI CCNNGG 5 cut(s) 412, 433, 590, 775, 793
BseGI GGATG 1 cut(s) 407
BseLI CCNNNNNNNGG 4 cut(s) 591, 596, 782, 800
BseMI GCAATG 1 cut(s) 31
BseNI ACTGG 1 cut(s) 715
BseRI GAGGAG 4 cut(s) 263, 432, 435, 438
BseSI GKGCMC 2 cut(s) 433, 732
BseXI GCAGC 2 cut(s) 76, 691
BsgI GTGCAG 1 cut(s) 168
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 2 cut(s) 246, 439
BshNI GGYRCC 1 cut(s) 428
BshVI ATCGAT 1 cut(s) 333
BsiHKAI GWGCWC 1 cut(s) 732
BsiHKCI CYCGRG 2 cut(s) 133, 434
BsiSI CCGG 3 cut(s) 144, 291, 537
BslI CCNNNNNNNGG 4 cut(s) 591, 596, 782, 800
BsnI GGCC 2 cut(s) 246, 439
BsoBI CYCGRG 2 cut(s) 133, 434
Bsp1286I GDGCHC 2 cut(s) 433, 732
Bsp143I GATC 6 cut(s) 30, 392, 529, 658, 735, 789
BspACI CCGC 1 cut(s) 277
BspANI GGCC 2 cut(s) 246, 439
BspDI ATCGAT 1 cut(s) 333
BspFNI CGCG 1 cut(s) 279
BspHI TCATGA 2 cut(s) 33, 46
BspLI GGNNCC 3 cut(s) 348, 394, 430
BspPI GGATC 6 cut(s) 38, 387, 400, 524, 730, 784
BspT107I GGYRCC 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 31
BsrFI RCCGGY 1 cut(s) 536
BsrI ACTGG 1 cut(s) 715
BssAI RCCGGY 1 cut(s) 536
BssECI CCNNGG 5 cut(s) 412, 433, 590, 775, 793
BssMI GATC 6 cut(s) 30, 392, 529, 658, 735, 789
BssNI GRCGYC 1 cut(s) 558
BssT1I CCWWGG 1 cut(s) 590
Bst2UI CCWGG 2 cut(s) 777, 795
Bst6I CTCTTC 2 cut(s) 92, 890
BstACI GRCGYC 1 cut(s) 558
BstC8I GCNNGC 1 cut(s) 300
BstF5I GGATG 1 cut(s) 407
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 2 cut(s) 235, 385
BstKTI GATC 6 cut(s) 33, 395, 532, 661, 738, 792
BstMBI GATC 6 cut(s) 30, 392, 529, 658, 735, 789
BstNI CCWGG 2 cut(s) 777, 795
BstSCI CCNGG 2 cut(s) 775, 793
BstSFI CTRYAG 1 cut(s) 216
BstSLI GKGCMC 2 cut(s) 433, 732
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 76, 691
BstX2I RGATCY 2 cut(s) 392, 735
BstYI RGATCY 2 cut(s) 392, 735
Bsu15I ATCGAT 1 cut(s) 333
BsuRI GGCC 2 cut(s) 246, 439
BsuTUI ATCGAT 1 cut(s) 333
BtsCI GGATG 1 cut(s) 407
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 1 cut(s) 492
Cac8I GCNNGC 1 cut(s) 300
CciI TCATGA 2 cut(s) 33, 46
CfoI GCGC 2 cut(s) 235, 385
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 1 cut(s) 437
ClaI ATCGAT 1 cut(s) 333
Csp6I GTAC 2 cut(s) 472, 670
CviAII CATG 5 cut(s) 34, 47, 255, 545, 744
CviJI RGCY 9 cut(s) 5, 43, 67, 138, 246, 251, 298, 367, 439
CviKI_1 RGCY 9 cut(s) 5, 43, 67, 138, 246, 251, 298, 367, 439
CviQI GTAC 2 cut(s) 472, 670
DpnI GATC 6 cut(s) 32, 394, 531, 660, 737, 791
DpnII GATC 6 cut(s) 30, 392, 529, 658, 735, 789
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
Eam1104I CTCTTC 2 cut(s) 92, 890
EarI CTCTTC 2 cut(s) 92, 890
Eco130I CCWWGG 1 cut(s) 590
Eco32I GATATC 1 cut(s) 499
Eco88I CYCGRG 2 cut(s) 133, 434
EcoRII CCWGG 2 cut(s) 775, 793
EcoRV GATATC 1 cut(s) 499
EcoT14I CCWWGG 1 cut(s) 590
ErhI CCWWGG 1 cut(s) 590
FaeI CATG 5 cut(s) 37, 50, 258, 548, 747
FatI CATG 5 cut(s) 33, 46, 254, 544, 743
FauNDI CATATG 1 cut(s) 610
Fnu4HI GCNGC 2 cut(s) 65, 705
FokI GGATG 1 cut(s) 394
Fsp4HI GCNGC 2 cut(s) 65, 705
FspBI CTAG 2 cut(s) 368, 818
GlaI GCGC 2 cut(s) 234, 384
GluI GCNGC 2 cut(s) 65, 705
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 2 cut(s) 246, 439
HapII CCGG 3 cut(s) 144, 291, 537
HhaI GCGC 2 cut(s) 235, 385
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 5 cut(s) 37, 50, 258, 548, 747
Hin6I GCGC 2 cut(s) 233, 383
HinP1I GCGC 2 cut(s) 233, 383
HincII GTYRAC 2 cut(s) 562, 867
HindII GTYRAC 2 cut(s) 562, 867
HindIII AAGCTT 1 cut(s) 296
HinfI GANTC 5 cut(s) 152, 201, 224, 335, 843
HpaII CCGG 3 cut(s) 144, 291, 537
HphI GGTGA 4 cut(s) 196, 313, 799, 817
Hpy166II GTNNAC 3 cut(s) 562, 730, 867
Hpy188I TCNGA 4 cut(s) 200, 416, 649, 663
Hpy188III TCNNGA 4 cut(s) 34, 47, 133, 505
Hpy8I GTNNAC 3 cut(s) 562, 730, 867
Hpy99I CGWCG 1 cut(s) 560
HpyAV CCTTC 4 cut(s) 114, 133, 277, 897
HpyCH4IV ACGT 1 cut(s) 558
HpyCH4V TGCA 5 cut(s) 110, 149, 359, 485, 730
HpySE526I ACGT 1 cut(s) 558
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 5 cut(s) 37, 50, 258, 548, 747
HspAI GCGC 2 cut(s) 233, 383
Kzo9I GATC 6 cut(s) 30, 392, 529, 658, 735, 789
Lsp1109I GCAGC 2 cut(s) 76, 691
LweI GCATC 1 cut(s) 163
MaeI CTAG 2 cut(s) 368, 818
MaeII ACGT 1 cut(s) 558
MaeIII GTNAC 1 cut(s) 7
MalI GATC 6 cut(s) 32, 394, 531, 660, 737, 791
MboI GATC 6 cut(s) 30, 392, 529, 658, 735, 789
MboII GAAGA 6 cut(s) 74, 79, 367, 493, 904, 907
MfeI CAATTG 1 cut(s) 16
MflI RGATCY 2 cut(s) 392, 735
MhlI GDGCHC 2 cut(s) 433, 732
MluCI AATT 4 cut(s) 16, 71, 282, 748
MlyI GAGTC 2 cut(s) 146, 195
MmeI TCCRAC 1 cut(s) 223
MslI CAYNNNNRTG 1 cut(s) 624
MspI CCGG 3 cut(s) 144, 291, 537
MspR9I CCNGG 2 cut(s) 777, 795
MunI CAATTG 1 cut(s) 16
MvaI CCWGG 2 cut(s) 777, 795
MvnI CGCG 1 cut(s) 279
NdeI CATATG 1 cut(s) 610
NdeII GATC 6 cut(s) 30, 392, 529, 658, 735, 789
NlaIII CATG 5 cut(s) 37, 50, 258, 548, 747
NlaIV GGNNCC 3 cut(s) 348, 394, 430
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 1 cut(s) 7
OliI CACNNNNGTG 1 cut(s) 624
PaeR7I CTCGAG 1 cut(s) 133
PagI TCATGA 2 cut(s) 33, 46
PfeI GAWTC 3 cut(s) 224, 335, 843
PflFI GACNNNGTC 1 cut(s) 683
PflMI CCANNNNNTGG 3 cut(s) 591, 782, 800
PkrI GCNGC 2 cut(s) 66, 706
PleI GAGTC 2 cut(s) 146, 195
PpsI GAGTC 2 cut(s) 146, 195
Psp6I CCWGG 2 cut(s) 775, 793
PspGI CCWGG 2 cut(s) 775, 793
PspN4I GGNNCC 3 cut(s) 348, 394, 430
PspPI GGNCC 1 cut(s) 437
PsuI RGATCY 2 cut(s) 392, 735
PsyI GACNNNGTC 1 cut(s) 683
RsaI GTAC 2 cut(s) 473, 671
RsaNI GTAC 2 cut(s) 472, 670
RseI CAYNNNNRTG 1 cut(s) 624
SatI GCNGC 2 cut(s) 65, 705
Sau3AI GATC 6 cut(s) 30, 392, 529, 658, 735, 789
Sau96I GGNCC 1 cut(s) 437
ScaI AGTACT 1 cut(s) 671
SchI GAGTC 2 cut(s) 146, 195
ScrFI CCNGG 2 cut(s) 777, 795
SduI GDGCHC 2 cut(s) 433, 732
SfaNI GCATC 1 cut(s) 163
SfcI CTRYAG 1 cut(s) 216
Sfr274I CTCGAG 1 cut(s) 133
SlaI CTCGAG 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 624
SmlI CTYRAG 2 cut(s) 133, 569
SmoI CTYRAG 2 cut(s) 133, 569
SpeI ACTAGT 1 cut(s) 817
Sse9I AATT 4 cut(s) 16, 71, 282, 748
SsiI CCGC 1 cut(s) 277
SspI AATATT 2 cut(s) 466, 604
SspMI CTAG 2 cut(s) 368, 818
StyD4I CCNGG 2 cut(s) 775, 793
StyI CCWWGG 1 cut(s) 590
TaiI ACGT 1 cut(s) 561
TaqI TCGA 4 cut(s) 134, 183, 333, 555
TasI AATT 4 cut(s) 16, 71, 282, 748
TatI WGTACW 1 cut(s) 669
TfiI GAWTC 3 cut(s) 224, 335, 843
TscAI CASTG 1 cut(s) 492
TseFI GTSAC 1 cut(s) 7
TseI GCWGC 2 cut(s) 64, 704
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 6 cut(s) 35, 237, 367, 650, 835, 871
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 1 cut(s) 492
Tth111I GACNNNGTC 1 cut(s) 683
Van91I CCANNNNNTGG 3 cut(s) 591, 782, 800
VneI GTGCAC 1 cut(s) 728
XapI RAATTY 1 cut(s) 748
XhoI CTCGAG 1 cut(s) 133
XspI CTAG 2 cut(s) 368, 818
ZraI GACGTC 1 cut(s) 559
ZrmI AGTACT 1 cut(s) 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.