RLG00000017642

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
19406854 .. 19409947
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017642

Sequence Viewer

Length: 2055 bp
ATGCCAGTTGGGATCCTATCCTCCATAGTGGGAAAGAGGGCCAAGCACGTACTACTTACAAATGCTACCACCAACAACCTCAGTGTATTTTGGAACTACGACAGAGCCCCAACCCTGAACTTTAATAGTTATGTGCCAAACTCTTCCCTGTCCATCCTTATTGACCTCAGAAATGCTCTACCCAAGTGGGTTAAAATTGGATTTTCATCTGCTATAGGCCTTTTCTCGGAGTTCCATGTGATAAGTTCATGGGAATTCAGTTCGGATTTGGATACTGAAGATAACATAAGAAAGAAAAAGAAGAAGAGCATAGTCTTAAAGATTAGGGTCGTTGCAGTAGTTCTTTTCTTCATTTTGATGCTCGACTTCACTACTAACTTCTCCTTCGTTGTGGACACTCTTAACAGGAGCAGAATTGGTGATGGGATTTCCTTCTTCCTCGCTCCGGTCAACTATCAAATTCCACCCAACTCCAACGGTCCCTTTATGGGCTTGTTCAACCAGACCACTGCTTTGGCAGCCTCCCAAAACCAGCTTGTTACGGTCGAGTTCGACACTGTGGCCGGCATCGTCGAGGATCAATCGTGGGGGCCGCACATCGGGATTACCAACAGGACCGTCACACCAGTTGTTCATGCCAGCTGGGATCCTTTCCTCCACAGTGGGAAAGAGTGTCGTGCACGGATAACATACAATGCTACCACCAACAACCTCACCGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCCTTACTATTGACCTGAGGAAGTCTCTCCCAGAGTGGGTTACAATTGGATTTTCAGCTTCTACAGGCCTTGCCTATGAGCGGCATGTTATAAGTTCATGGGAATTCACTAGTTCAGAATTAAAGTCCGATGCAAGCCGAAGGAGGATAGTCTTGAAGATTGTCGCCGCAGCAGTAGTTGTTTTCTTGATTTTGATGCTTTATGTGGCCTACAGGTGGGTCGTACGGAAGCGGATAAAGAGCAATTGTGGAGATGGAAATGGGCTGAATGATTCCTCCAGTACTGCATTGTCCTCCATAAATCCAAGACAATTTACTTATCAAGAACTGGTTGCAGCCACCAATGGCTTCGTAAACGATAGAAGGCTAGGGCAGGGAGGATCAGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGCACTATGAGAAGATCTTCATCAACGAAGTCAAAATCATAAGCAGCATTATACATAAAAACTTGGTGCGCTTCATTGGATGGTGTCATGCGCAGGGCGAATGCATGATTGTTTATGAATACATGCCTAACAGTAGCCTTGACACGCATCTATTTGGCTCTAGAGCAACCTTGCCATGGGAGTTTAGGTATAGAATAGCTTTAGGCTTGGCCTCAGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAATGTTCTGTTGGACAACGATTTCAACACTAAACTTGGTGATTTTGGGATTGCTAAGCTCGTGGATCCGCTGCTAAGGTCTCAGACTACAGGGGTCGTCGGGACTTTTGGATACATGGCTCCAGAATATGTTATTGAAGGGAAGGCAAGCAAAGAATCAGACATGTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGAGGACTTACTATGATGGAGAATTTCACTTGCCGCTTTATAGATGGGTTTGGCATTTGTACCTTGCAGAAAATTTACTGGATGCAGCTGATGAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCACCCCAACAGCAAAGAAAGGCCAAAAACAGGACAAGTGATTAAGTTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCACATATCATGCTTGATTACCCAATGCCTCAACCTCAGCAACAAGCTCAATTCGGTTCCTCTCAGCCTCTGTTGTCACTAACTTCTAGCTTCAACACTGTAGGTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

685

Amino Acids

76.77

Weight (kDa)

7.01

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 18 - 101 7.4e-10 Legume lectin domain
Lectin_legB PF00139 121 - 300 3.9e-44 Legume lectin domain
Pkinase PF00069 372 - 573 3.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 374 - 573 8.9e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 854, 1158
Acc16I TGCGCA 1 cut(s) 1314
AccBSI CCGCTC 1 cut(s) 844
AciI CCGC 6 cut(s) 593, 844, 930, 994, 1568, 1739
AclWI GGATC 9 cut(s) 7, 20, 585, 641, 654, 1150, 1172, 1559, 1572
AcoI YGGCCR 1 cut(s) 561
AcsI RAATTY 7 cut(s) 254, 459, 739, 751, 866, 1727, 1777
AcuI CTGAAG 1 cut(s) 297
AfaI GTAC 4 cut(s) 51, 987, 1045, 1766
AfeI AGCGCT 1 cut(s) 1440
AflIII ACRYGT 1 cut(s) 1662
AgsI TTSAA 6 cut(s) 499, 919, 1525, 1637, 1925, 2038
AhlI ACTAGT 1 cut(s) 872
Alw21I GWGCWC 2 cut(s) 682, 1865
Alw26I GTCTC 2 cut(s) 792, 1584
Alw44I GTGCAC 2 cut(s) 678, 1861
AlwI GGATC 9 cut(s) 7, 20, 585, 641, 654, 1150, 1172, 1559, 1572
AlwNI CAGNNNCTG 2 cut(s) 1193, 2014
Aor51HI AGCGCT 1 cut(s) 1440
AoxI GGCC 9 cut(s) 39, 217, 561, 590, 829, 969, 1431, 1683, 1886
ApaLI GTGCAC 2 cut(s) 678, 1861
ApeKI GCWGC 6 cut(s) 518, 932, 1097, 1266, 1570, 1790
ApoI RAATTY 7 cut(s) 254, 459, 739, 751, 866, 1727, 1777
ArsI GACNNNNNNTTYG 2 cut(s) 496, 528
Asp700I GAANNNNTTC 1 cut(s) 1238
AspLEI GCGC 3 cut(s) 1293, 1315, 1441
AspS9I GGNCC 4 cut(s) 39, 479, 590, 615
AsuHPI GGTGA 4 cut(s) 431, 706, 1550, 1859
AvaII GGWCC 2 cut(s) 479, 615
AxyI CCTNAGG 1 cut(s) 779
BaeGI GKGCMC 2 cut(s) 682, 1865
BamHI GGATCC 3 cut(s) 12, 646, 1564
BanII GRGCYC 1 cut(s) 109
BauI CACGAG 2 cut(s) 1454, 1559
Bbv12I GWGCWC 2 cut(s) 682, 1865
BbvCI CCTCAGC 2 cut(s) 1435, 1980
BbvI GCAGC 6 cut(s) 530, 944, 1109, 1278, 1557, 1802
BccI CCATC 6 cut(s) 161, 416, 1010, 1296, 1715, 1743
BciVI GTATCC 2 cut(s) 265, 1604
BclI TGATCA 1 cut(s) 1819
BcoDI GTCTC 2 cut(s) 792, 1584
BcuI ACTAGT 1 cut(s) 872
BfaI CTAG 5 cut(s) 873, 1130, 1178, 1383, 2031
BfmI CTRYAG 5 cut(s) 213, 825, 973, 1587, 2043
BfoI RGCGCY 1 cut(s) 1442
BfuI GTATCC 2 cut(s) 265, 1604
BglII AGATCT 2 cut(s) 1174, 1236
BlpI GCTNAGC 1 cut(s) 1554
BmcAI AGTACT 1 cut(s) 1045
Bme18I GGWCC 2 cut(s) 479, 615
BmgT120I GGNCC 4 cut(s) 39, 479, 590, 615
BmiI GGNNCC 7 cut(s) 14, 481, 591, 648, 1566, 1620, 2002
BmsI GCATC 7 cut(s) 348, 576, 883, 948, 1378, 1450, 1777
BplI GAGNNNNNCTC 2 cut(s) 772, 804
BpmI CTGGAG 3 cut(s) 1024, 1605, 1901
Bpu10I CCTNAGC 3 cut(s) 1435, 1574, 1980
Bpu1102I GCTNAGC 1 cut(s) 1554
BsaAI YACGTR 1 cut(s) 49
BsaBI GATNNNNATC 3 cut(s) 205, 1241, 1818
BsaI GGTCTC 1 cut(s) 1584
BsaJI CCNNGG 2 cut(s) 1397, 1686
BsaWI WCCGGW 1 cut(s) 445
BsaXI ACNNNNNCTCC 4 cut(s) 1394, 1424, 1826, 1856
Bse118I RCCGGY 1 cut(s) 563
Bse1I ACTGG 5 cut(s) 5, 626, 1041, 1095, 1788
Bse21I CCTNAGG 1 cut(s) 779
Bse3DI GCAATG 1 cut(s) 1931
Bse8I GATNNNNATC 3 cut(s) 205, 1241, 1818
BseDI CCNNGG 2 cut(s) 1397, 1686
BseGI GGATG 4 cut(s) 153, 1307, 1465, 1792
BseJI GATNNNNATC 3 cut(s) 205, 1241, 1818
BseMI GCAATG 1 cut(s) 1931
BseMII CTCAG 7 cut(s) 94, 181, 770, 1449, 1595, 1994, 2021
BseNI ACTGG 5 cut(s) 5, 626, 1041, 1095, 1788
BseSI GKGCMC 2 cut(s) 682, 1865
BseXI GCAGC 6 cut(s) 530, 944, 1109, 1278, 1557, 1802
BseYI CCCAGC 1 cut(s) 642
BsgI GTGCAG 1 cut(s) 1206
Bsh1285I CGRYCG 1 cut(s) 546
BshFI GGCC 9 cut(s) 41, 219, 563, 592, 831, 971, 1433, 1685, 1888
BsiEI CGRYCG 1 cut(s) 546
BsiHKAI GWGCWC 2 cut(s) 682, 1865
BsiSI CCGG 2 cut(s) 446, 564
BsiWI CGTACG 1 cut(s) 985
BslFI GGGAC 2 cut(s) 465, 1615
BsmAI GTCTC 2 cut(s) 792, 1584
BsmFI GGGAC 2 cut(s) 465, 1615
BsmI GAATGC 1 cut(s) 1328
BsnI GGCC 9 cut(s) 41, 219, 563, 592, 831, 971, 1433, 1685, 1888
Bso31I GGTCTC 1 cut(s) 1584
Bsp1286I GDGCHC 3 cut(s) 109, 682, 1865
Bsp143I GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
Bsp1720I GCTNAGC 1 cut(s) 1554
Bsp19I CCATGG 1 cut(s) 1397
BspACI CCGC 6 cut(s) 593, 844, 930, 994, 1568, 1739
BspANI GGCC 9 cut(s) 41, 219, 563, 592, 831, 971, 1433, 1685, 1888
BspCNI CTCAG 7 cut(s) 93, 180, 771, 1448, 1594, 1993, 2020
BspLI GGNNCC 7 cut(s) 14, 481, 591, 648, 1566, 1620, 2002
BspPI GGATC 9 cut(s) 7, 20, 585, 641, 654, 1150, 1172, 1559, 1572
BspQI GCTCTTC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 1584
BsrBI CCGCTC 1 cut(s) 844
BsrDI GCAATG 1 cut(s) 1931
BsrFI RCCGGY 1 cut(s) 563
BsrI ACTGG 5 cut(s) 5, 626, 1041, 1095, 1788
BssAI RCCGGY 1 cut(s) 563
BssECI CCNNGG 2 cut(s) 1397, 1686
BssMI GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
BssSI CACGAG 2 cut(s) 1454, 1559
BssT1I CCWWGG 2 cut(s) 1397, 1686
Bst2BI CACGAG 2 cut(s) 1454, 1559
Bst4CI ACNGT 8 cut(s) 479, 544, 559, 619, 662, 718, 1355, 2044
Bst6I CTCTTC 3 cut(s) 148, 299, 1193
BstBAI YACGTR 1 cut(s) 49
BstC8I GCNNGC 4 cut(s) 565, 640, 898, 1648
BstDEI CTNAG 9 cut(s) 80, 167, 779, 1435, 1554, 1574, 1581, 1980, 2007
BstDSI CCRYGG 1 cut(s) 1397
BstF5I GGATG 4 cut(s) 153, 1307, 1465, 1792
BstH2I RGCGCY 1 cut(s) 1442
BstHHI GCGC 3 cut(s) 1293, 1315, 1441
BstKTI GATC 9 cut(s) 15, 580, 649, 1145, 1167, 1177, 1239, 1567, 1822
BstMAI GTCTC 2 cut(s) 792, 1584
BstMBI GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
BstMCI CGRYCG 1 cut(s) 546
BstMWI GCNNNNNNNGC 1 cut(s) 518
BstNSI RCATGY 3 cut(s) 851, 1348, 1666
BstSFI CTRYAG 5 cut(s) 213, 825, 973, 1587, 2043
BstSLI GKGCMC 2 cut(s) 682, 1865
BstV1I GCAGC 6 cut(s) 530, 944, 1109, 1278, 1557, 1802
BstX2I RGATCY 5 cut(s) 12, 646, 1174, 1236, 1564
BstXI CCANNNNNNTGG 1 cut(s) 514
BstYI RGATCY 5 cut(s) 12, 646, 1174, 1236, 1564
Bsu36I CCTNAGG 1 cut(s) 779
BsuI GTATCC 2 cut(s) 265, 1604
BsuRI GGCC 9 cut(s) 41, 219, 563, 592, 831, 971, 1433, 1685, 1888
BtgI CCRYGG 1 cut(s) 1397
BtsCI GGATG 4 cut(s) 153, 1307, 1465, 1792
BtsI GCAGTG 2 cut(s) 507, 1475
BtsIMutI CAGTG 6 cut(s) 88, 507, 555, 667, 1475, 2040
Cac8I GCNNGC 4 cut(s) 565, 640, 898, 1648
CaiI CAGNNNCTG 2 cut(s) 1193, 2014
CfoI GCGC 3 cut(s) 1293, 1315, 1441
Cfr10I RCCGGY 1 cut(s) 563
Cfr13I GGNCC 4 cut(s) 39, 479, 590, 615
Csp6I GTAC 4 cut(s) 50, 986, 1044, 1765
CviQI GTAC 4 cut(s) 50, 986, 1044, 1765
DdeI CTNAG 9 cut(s) 80, 167, 779, 1435, 1554, 1574, 1581, 1980, 2007
DpnI GATC 9 cut(s) 14, 579, 648, 1144, 1166, 1176, 1238, 1566, 1821
DpnII GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
EaeI YGGCCR 1 cut(s) 561
Eam1104I CTCTTC 3 cut(s) 148, 299, 1193
EarI CTCTTC 3 cut(s) 148, 299, 1193
Eco130I CCWWGG 2 cut(s) 1397, 1686
Eco147I AGGCCT 2 cut(s) 219, 831
Eco24I GRGCYC 1 cut(s) 109
Eco31I GGTCTC 1 cut(s) 1584
Eco32I GATATC 1 cut(s) 1489
Eco47I GGWCC 2 cut(s) 479, 615
Eco47III AGCGCT 1 cut(s) 1440
Eco57I CTGAAG 1 cut(s) 297
Eco81I CCTNAGG 1 cut(s) 779
EcoRI GAATTC 2 cut(s) 254, 866
EcoRV GATATC 1 cut(s) 1489
EcoT14I CCWWGG 2 cut(s) 1397, 1686
EcoT22I ATGCAT 1 cut(s) 1328
EcoT38I GRGCYC 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 1397, 1686
FalI AAGNNNNNCTT 4 cut(s) 1190, 1222, 1696, 1728
FaqI GGGAC 2 cut(s) 465, 1615
FbaI TGATCA 1 cut(s) 1819
FokI GGATG 4 cut(s) 140, 1314, 1472, 1799
FriOI GRGCYC 1 cut(s) 109
FspBI CTAG 5 cut(s) 873, 1130, 1178, 1383, 2031
FspI TGCGCA 1 cut(s) 1314
GlaI GCGC 3 cut(s) 1292, 1314, 1440
GsaI CCCAGC 1 cut(s) 646
GsuI CTGGAG 3 cut(s) 1024, 1605, 1901
HaeII RGCGCY 1 cut(s) 1442
HaeIII GGCC 9 cut(s) 41, 219, 563, 592, 831, 971, 1433, 1685, 1888
HapII CCGG 2 cut(s) 446, 564
HhaI GCGC 3 cut(s) 1293, 1315, 1441
Hin6I GCGC 3 cut(s) 1291, 1313, 1439
HinP1I GCGC 3 cut(s) 1291, 1313, 1439
HincII GTYRAC 1 cut(s) 451
HindII GTYRAC 1 cut(s) 451
HinfI GANTC 3 cut(s) 1034, 1203, 1655
HpaII CCGG 2 cut(s) 446, 564
HphI GGTGA 4 cut(s) 431, 706, 1550, 1859
Hpy166II GTNNAC 5 cut(s) 394, 451, 680, 1117, 1863
Hpy188I TCNGA 9 cut(s) 170, 229, 265, 880, 892, 1219, 1584, 1660, 1676
Hpy188III TCNNGA 8 cut(s) 601, 916, 949, 1085, 1146, 1383, 1600, 1622
Hpy8I GTNNAC 5 cut(s) 394, 451, 680, 1117, 1863
Hpy99I CGWCG 2 cut(s) 575, 1601
HpyAV CCTTC 8 cut(s) 394, 442, 897, 1119, 1487, 1631, 1636, 1698
HpyCH4III ACNGT 8 cut(s) 479, 544, 559, 619, 662, 718, 1355, 2044
HpyCH4IV ACGT 1 cut(s) 48
HpyF10VI GCNNNNNNNGC 1 cut(s) 518
HpyF3I CTNAG 9 cut(s) 80, 167, 779, 1435, 1554, 1574, 1581, 1980, 2007
HpySE526I ACGT 1 cut(s) 48
HspAI GCGC 3 cut(s) 1291, 1313, 1439
KroI GCCGGC 1 cut(s) 563
KroNI GCCGGC 1 cut(s) 565
Ksp22I TGATCA 1 cut(s) 1819
Kzo9I GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
LguI GCTCTTC 1 cut(s) 299
LmnI GCTCC 3 cut(s) 408, 448, 1624
Lsp1109I GCAGC 6 cut(s) 530, 944, 1109, 1278, 1557, 1802
LweI GCATC 7 cut(s) 348, 576, 883, 948, 1378, 1450, 1777
MaeI CTAG 5 cut(s) 873, 1130, 1178, 1383, 2031
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 4 cut(s) 538, 619, 802, 2019
MalI GATC 9 cut(s) 14, 579, 648, 1144, 1166, 1176, 1238, 1566, 1821
MbiI CCGCTC 1 cut(s) 844
MboI GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
MfeI CAATTG 2 cut(s) 807, 1006
MflI RGATCY 5 cut(s) 12, 646, 1174, 1236, 1564
MhlI GDGCHC 3 cut(s) 109, 682, 1865
MmeI TCCRAC 4 cut(s) 498, 1242, 1491, 1831
Mph1103I ATGCAT 1 cut(s) 1328
MroNI GCCGGC 1 cut(s) 563
MroXI GAANNNNTTC 1 cut(s) 1238
MseI TTAA 8 cut(s) 123, 192, 317, 402, 884, 1844, 1908, 2053
MslI CAYNNNNRTG 2 cut(s) 356, 1458
MspA1I CMGCKG 3 cut(s) 642, 1570, 1793
MspI CCGG 2 cut(s) 446, 564
MunI CAATTG 2 cut(s) 807, 1006
Mva1269I GAATGC 1 cut(s) 1328
MwoI GCNNNNNNNGC 1 cut(s) 518
NaeI GCCGGC 1 cut(s) 565
NcoI CCATGG 1 cut(s) 1397
NdeII GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
NgoMIV GCCGGC 1 cut(s) 563
NlaIV GGNNCC 7 cut(s) 14, 481, 591, 648, 1566, 1620, 2002
NmuCI GTSAC 2 cut(s) 619, 2019
NsbI TGCGCA 1 cut(s) 1314
NsiI ATGCAT 1 cut(s) 1328
NspI RCATGY 3 cut(s) 851, 1348, 1666
PceI AGGCCT 2 cut(s) 219, 831
PciI ACATGT 1 cut(s) 1662
PciSI GCTCTTC 1 cut(s) 299
PctI GAATGC 1 cut(s) 1328
PdiI GCCGGC 1 cut(s) 565
PdmI GAANNNNTTC 1 cut(s) 1238
PfeI GAWTC 3 cut(s) 1034, 1203, 1655
Pfl23II CGTACG 1 cut(s) 985
Ppu21I YACGTR 1 cut(s) 49
PscI ACATGT 1 cut(s) 1662
PsiI TTATAA 2 cut(s) 854, 1158
PspFI CCCAGC 1 cut(s) 642
PspLI CGTACG 1 cut(s) 985
PspN4I GGNNCC 7 cut(s) 14, 481, 591, 648, 1566, 1620, 2002
PspPI GGNCC 4 cut(s) 39, 479, 590, 615
PstNI CAGNNNCTG 2 cut(s) 1193, 2014
PsuI RGATCY 5 cut(s) 12, 646, 1174, 1236, 1564
PvuII CAGCTG 2 cut(s) 642, 1793
RsaI GTAC 4 cut(s) 51, 987, 1045, 1766
RsaNI GTAC 4 cut(s) 50, 986, 1044, 1765
RseI CAYNNNNRTG 2 cut(s) 356, 1458
SapI GCTCTTC 1 cut(s) 299
SaqAI TTAA 8 cut(s) 123, 192, 317, 402, 884, 1844, 1908, 2053
Sau3AI GATC 9 cut(s) 12, 577, 646, 1142, 1164, 1174, 1236, 1564, 1819
Sau96I GGNCC 4 cut(s) 39, 479, 590, 615
ScaI AGTACT 1 cut(s) 1045
SduI GDGCHC 3 cut(s) 109, 682, 1865
SfaNI GCATC 7 cut(s) 348, 576, 883, 948, 1378, 1450, 1777
SfcI CTRYAG 5 cut(s) 213, 825, 973, 1587, 2043
SinI GGWCC 2 cut(s) 479, 615
SmiMI CAYNNNNRTG 2 cut(s) 356, 1458
SpeI ACTAGT 1 cut(s) 872
SseBI AGGCCT 2 cut(s) 219, 831
SsiI CCGC 6 cut(s) 593, 844, 930, 994, 1568, 1739
SspMI CTAG 5 cut(s) 873, 1130, 1178, 1383, 2031
StuI AGGCCT 2 cut(s) 219, 831
StyI CCWWGG 2 cut(s) 1397, 1686
TaaI ACNGT 8 cut(s) 479, 544, 559, 619, 662, 718, 1355, 2044
TaiI ACGT 1 cut(s) 51
TaqI TCGA 5 cut(s) 363, 546, 552, 573, 744
TatI WGTACW 1 cut(s) 1043
TauI GCSGC 4 cut(s) 595, 847, 932, 1741
TfiI GAWTC 3 cut(s) 1034, 1203, 1655
Tru1I TTAA 8 cut(s) 123, 192, 317, 402, 884, 1844, 1908, 2053
Tru9I TTAA 8 cut(s) 123, 192, 317, 402, 884, 1844, 1908, 2053
TscAI CASTG 6 cut(s) 88, 514, 562, 667, 1475, 2047
TseFI GTSAC 2 cut(s) 619, 2019
TseI GCWGC 6 cut(s) 518, 932, 1097, 1266, 1570, 1790
Tsp45I GTSAC 2 cut(s) 619, 2019
TspGWI ACGGA 2 cut(s) 697, 1003
TspRI CASTG 6 cut(s) 88, 514, 562, 667, 1475, 2047
VneI GTGCAC 2 cut(s) 678, 1861
VpaK11BI GGWCC 2 cut(s) 479, 615
XapI RAATTY 7 cut(s) 254, 459, 739, 751, 866, 1727, 1777
XbaI TCTAGA 1 cut(s) 1382
XceI RCATGY 3 cut(s) 851, 1348, 1666
XmnI GAANNNNTTC 1 cut(s) 1238
XspI CTAG 5 cut(s) 873, 1130, 1178, 1383, 2031
ZrmI AGTACT 1 cut(s) 1045
Zsp2I ATGCAT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.