Rw5G020640

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
27320239 .. 27322425
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G020640.1

Sequence Viewer

Length: 2187 bp
ATGGCTGTCAAAAACACATTGCGGTTGTCCCTAAAGCAGTTTCAATTGCTTCTTCTTCTCGTATTACTGTTGCCCTTCTCTGCAACTCCATTGACCTTCAATTTCCCCAACTTTCCCTCTTCTGTTACCAACATTAATATAACTATGGAAGAAGATGCTGTCGCCGATGGCTATCTCCGACTGACCAAGAGTGCTCGTGACCAGGTAATAAATGGGAGCGTTGGTAGAGCTACCTTCAAAGAACCCTTACTCCTCCGCCAAAACTCCACTGGAAAACTCGCTGATTTTACCTCAAGTTTCACATTCGTCCTTGAAGGCTCCCCCGAGATCCCCAACCAAACACTGTACGCTGATGGGCTGGCCTTCTTCCTAGCGCCGGCCGGGTCCAAACTAAACGTCGCATTAGGAAAAGGTAGCAGTCTTGGCCTCCCTGTCAACTACTCCCTTGAAAACTATACCATGTCGAGTACTGAATACCCATTTGTGGCGGTCGAGTTTGATATCTACTCTTCTCAGACAAACTCGACGGATGGGGATCTAAATTACGCTCATGTGGGCATCGACATCAACTCCCTCAAGTCCAATATTACCGAGCCATGGAATAGTGATATTAAGGAAGGAAAAGAAAATAATGCCACAGTTAGTTACGACTCCACCTCGAAAAATCTGAGTGTTGCCTTCACTACGTTTGAAAACGAAGTCCAGGTGATCAAAAATATATCTCTCTCAGTTGATCTGCTCGAATACTTGCCCGATAGGGTCATCGTTGGGTTCTCAGCCGCAACAGGTGATCAGATTGCTCTACATAAGATCAATTCTTGGAGCTTTGATTCAACTTCATTGGAAGAGGAAAACAGCACACCAATTCTTCCTGAGCCAACGGTCAAACCCAAGTCAGGAAATGCGAATGTTGGACTAGTAGTTGGGTTGGTTGTTGGGGGAGGTGTTATCTTGGCTGGTGTGTTGGGTTTGCTTTGGTTCGTCTTCTGCAGGAAGAGGAAGGAAACAGCAGGGGAAAGTAGTGATGATGATACTAGGGTACTTCATGATTTGATCCCTGAAGAAATAGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAGTGAATTGGCCCTTGCAACTAGTAATTTTGAACAGGGACAAAAGCTTGGGGAGGGAGGCTTTGGTGGAGTTTACAAGGGCTTCATCAAAGATATGAACACGCACGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAGGGGCTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCGGCTGAGGCATCGGAATCTGGTGCAACTCATCGGTTGGTGCTATGAAAAGAAACTCCTACTTGTCTACGAATTGATGCCCAACGGTAGCTTGGATTCTCACTTGTTCAAAGAAAAGAGCTTGTTAACTTGGGAGGTAAGATACAAAATTGCACATGGATTGGCCTCGGGATTGCTCTATCTACACCAAGGATGGGAACAATGTGTGCTGCACAGAGATATCAAATCCAGCAATGTTATGTTGGATTCCAATTTTAACACGAAACTTGGAGATTTTGGGTTAGCCAAACTTGTAGACCATGGAAAACCCTTGCAAACAACAATTGTGGCCGGAACCATGGGCTACATGGCTACGGAATATGTTACAACGGGAAAGGCTAGCAAGGAAACAGATGTCTATAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCAATTGACCATAGGTATGAAGGAAAGCAAATCAATATGGTCGACTGGGTGTGGGAGCTCTATGGAGAAGGGAAAATCATTGAAGCAGCCGACCCAAAATTGTGCGGGGATTTTGATGAGAAGCAAATGGAGTGCTTAATGATGGTTGGGCTATGGTGTGCTAATCCAGATCACAACTGTAGGCCTTTGATACAACAAGCAATCCAAGTGCTTAACTTCGAAGTTCCATTGCCCAATCTCCCATTGACAATGCCTGTGGCCTTTGCTCTTCCATTATCACTGTCGATGTTGTATAGTAGTGACACTACTAGAGGTCAAGGTGAGTCTTCAGGATATGGCTCTACCATCAACTCCTCACAGTTCACCTCATCTTCTATCACCCATTCTAATCCATCAGCAGCATTTTCTAGAGAGGGAGGGTCCTCCTTCTCTCTAGAAATTTTATCAAATCAGCCATCATTTTGA

Protein Analysis

728

Amino Acids

79.81

Weight (kDa)

5.42

Isoelectric Point (pI)

31.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 287 2.6e-58 Legume lectin domain
Lectin_L-type_dom PF18483 55 - 272 4.7e-08 Legume lectin beta-barrel domain
Pkinase PF00069 377 - 589 6.8e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 378 - 580 4.7e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 1347, 1575, 1764
AciI CCGC 5 cut(s) 22, 256, 488, 780, 1827
AclWI GGATC 3 cut(s) 322, 543, 1048
AcoI YGGCCR 2 cut(s) 378, 1608
AcsI RAATTY 1 cut(s) 2160
AcuI CTGAAG 3 cut(s) 1080, 1268, 2034
AfaI GTAC 4 cut(s) 347, 469, 1041, 1100
AfiI CCNNNNNNNGG 5 cut(s) 376, 484, 597, 896, 1474
AhlI ACTAGT 2 cut(s) 916, 1121
AjnI CCWGG 2 cut(s) 201, 702
AloI GAACNNNNNNTCC 2 cut(s) 234, 266
AluBI AGCT 8 cut(s) 230, 825, 1147, 1211, 1371, 1401, 1709, 1780
AluI AGCT 8 cut(s) 230, 825, 1147, 1211, 1371, 1401, 1709, 1780
Alw21I GWGCWC 2 cut(s) 196, 1782
AlwI GGATC 3 cut(s) 322, 543, 1048
AlwNI CAGNNNCTG 1 cut(s) 1246
Ama87I CYCGRG 2 cut(s) 323, 1447
AoxI GGCC 9 cut(s) 360, 378, 424, 1081, 1110, 1443, 1608, 1904, 1980
ApeKI GCWGC 4 cut(s) 1259, 1489, 1808, 2120
ApoI RAATTY 1 cut(s) 2160
ArsI GACNNNNNNTTYG 2 cut(s) 381, 413
AseI ATTAAT 1 cut(s) 135
AspA2I CCTAGG 1 cut(s) 1085
AspLEI GCGC 1 cut(s) 376
AspS9I GGNCC 4 cut(s) 384, 1082, 1111, 2142
AsuC2I CCSGG 1 cut(s) 382
AsuHPI GGTGA 5 cut(s) 718, 800, 2054, 2077, 2092
AsuII TTCGAA 1 cut(s) 1941
AsuNHI GCTAGC 1 cut(s) 1658
AvaI CYCGRG 2 cut(s) 323, 1447
AvaII GGWCC 2 cut(s) 384, 2142
AvrII CCTAGG 1 cut(s) 1085
BaeI ACNNNNGTAYC 2 cut(s) 1023, 1056
BanII GRGCYC 1 cut(s) 1782
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BauI CACGAG 1 cut(s) 195
BbsI GAAGAC 2 cut(s) 976, 2040
Bbv12I GWGCWC 2 cut(s) 196, 1782
BbvCI CCTCAGC 1 cut(s) 1286
BbvI GCAGC 4 cut(s) 1271, 1476, 1820, 2132
BccI CCATC 8 cut(s) 161, 347, 524, 1467, 1858, 2075, 2122, 2185
BciT130I CCWGG 2 cut(s) 203, 704
BclI TGATCA 2 cut(s) 708, 790
BcnI CCSGG 1 cut(s) 382
BcuI ACTAGT 2 cut(s) 916, 1121
BfaI CTAG 9 cut(s) 371, 917, 1035, 1086, 1122, 1659, 2031, 2130, 2156
BfmI CTRYAG 3 cut(s) 988, 1678, 1900
BfoI RGCGCY 1 cut(s) 377
BisI GCNGC 5 cut(s) 780, 1260, 1490, 1809, 2121
BlnI CCTAGG 1 cut(s) 1085
BlsI GCNGC 5 cut(s) 781, 1261, 1491, 1810, 2122
BmcAI AGTACT 1 cut(s) 469
Bme1390I CCNGG 3 cut(s) 203, 382, 704
Bme18I GGWCC 2 cut(s) 384, 2142
BmeT110I CYCGRG 2 cut(s) 323, 1447
BmgT120I GGNCC 4 cut(s) 384, 1082, 1111, 2142
BmiI GGNNCC 4 cut(s) 319, 385, 1615, 2143
BmrFI CCNGG 3 cut(s) 203, 382, 704
BmrI ACTGGG 1 cut(s) 1777
BmsI GCATC 4 cut(s) 145, 567, 1300, 1347
BmtI GCTAGC 1 cut(s) 1662
BmuI ACTGGG 1 cut(s) 1777
BpiI GAAGAC 2 cut(s) 976, 2040
Bpu10I CCTNAGC 2 cut(s) 873, 1286
Bpu14I TTCGAA 1 cut(s) 1941
BpuEI CTTGAG 2 cut(s) 277, 560
BpuMI CCSGG 1 cut(s) 382
BsaAI YACGTR 1 cut(s) 1207
BsaBI GATNNNNATC 2 cut(s) 171, 534
BsaJI CCNNGG 6 cut(s) 596, 1085, 1446, 1468, 1579, 1617
BsaXI ACNNNNNCTCC 6 cut(s) 208, 234, 238, 264, 554, 584
Bsc4I CCNNNNNNNGG 5 cut(s) 376, 484, 597, 896, 1474
Bse118I RCCGGY 1 cut(s) 376
Bse1I ACTGG 2 cut(s) 274, 1772
Bse3DI GCAATG 3 cut(s) 17, 1519, 1949
Bse8I GATNNNNATC 2 cut(s) 171, 534
BseBI CCWGG 2 cut(s) 203, 704
BseDI CCNNGG 6 cut(s) 596, 1085, 1446, 1468, 1579, 1617
BseGI GGATG 2 cut(s) 535, 1478
BseJI GATNNNNATC 2 cut(s) 171, 534
BseLI CCNNNNNNNGG 5 cut(s) 376, 484, 597, 896, 1474
BseMI GCAATG 3 cut(s) 17, 1519, 1949
BseMII CTCAG 6 cut(s) 527, 659, 741, 789, 864, 1277
BseNI ACTGG 2 cut(s) 274, 1772
BseRI GAGGAG 2 cut(s) 242, 2065
BseX3I CGGCCG 1 cut(s) 378
BseXI GCAGC 4 cut(s) 1271, 1476, 1820, 2132
BsgI GTGCAG 1 cut(s) 1475
Bsh1285I CGRYCG 2 cut(s) 381, 492
BshFI GGCC 9 cut(s) 362, 380, 426, 1083, 1112, 1445, 1610, 1906, 1982
BsiEI CGRYCG 2 cut(s) 381, 492
BsiHKAI GWGCWC 2 cut(s) 196, 1782
BsiHKCI CYCGRG 2 cut(s) 323, 1447
BsiSI CCGG 3 cut(s) 377, 381, 1611
BslFI GGGAC 3 cut(s) 13, 1090, 1152
BslI CCNNNNNNNGG 5 cut(s) 376, 484, 597, 896, 1474
BsmFI GGGAC 3 cut(s) 13, 1090, 1152
BsnI GGCC 9 cut(s) 362, 380, 426, 1083, 1112, 1445, 1610, 1906, 1982
BsoBI CYCGRG 2 cut(s) 323, 1447
Bsp119I TTCGAA 1 cut(s) 1941
Bsp1286I GDGCHC 2 cut(s) 196, 1782
Bsp143I GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
Bsp19I CCATGG 3 cut(s) 596, 1579, 1617
BspACI CCGC 5 cut(s) 22, 256, 488, 780, 1827
BspANI GGCC 9 cut(s) 362, 380, 426, 1083, 1112, 1445, 1610, 1906, 1982
BspCNI CTCAG 6 cut(s) 526, 660, 740, 788, 865, 1278
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 4 cut(s) 319, 385, 1615, 2143
BspMAI CTGCAG 1 cut(s) 992
BspOI GCTAGC 1 cut(s) 1662
BspPI GGATC 3 cut(s) 322, 543, 1048
BspQI GCTCTTC 1 cut(s) 1995
BspT104I TTCGAA 1 cut(s) 1941
BsrDI GCAATG 3 cut(s) 17, 1519, 1949
BsrFI RCCGGY 1 cut(s) 376
BsrI ACTGG 2 cut(s) 274, 1772
BssAI RCCGGY 1 cut(s) 376
BssECI CCNNGG 6 cut(s) 596, 1085, 1446, 1468, 1579, 1617
BssMI GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
BssSI CACGAG 1 cut(s) 195
BssT1I CCWWGG 5 cut(s) 596, 1085, 1468, 1579, 1617
Bst2BI CACGAG 1 cut(s) 195
Bst2UI CCWGG 2 cut(s) 203, 704
Bst4CI ACNGT 9 cut(s) 69, 345, 640, 883, 1103, 1367, 1901, 2004, 2082
Bst6I CTCTTC 5 cut(s) 124, 514, 840, 989, 1995
BstBAI YACGTR 1 cut(s) 1207
BstBI TTCGAA 1 cut(s) 1941
BstC8I GCNNGC 3 cut(s) 360, 378, 1660
BstDEI CTNAG 6 cut(s) 513, 668, 727, 775, 873, 1286
BstDSI CCRYGG 3 cut(s) 596, 1579, 1617
BstF5I GGATG 2 cut(s) 535, 1478
BstH2I RGCGCY 1 cut(s) 377
BstHHI GCGC 1 cut(s) 376
BstKTI GATC 8 cut(s) 330, 538, 711, 736, 793, 813, 1056, 1894
BstMBI GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
BstMCI CGRYCG 2 cut(s) 381, 492
BstMWI GCNNNNNNNGC 1 cut(s) 423
BstNI CCWGG 2 cut(s) 203, 704
BstSCI CCNGG 3 cut(s) 201, 380, 702
BstSFI CTRYAG 3 cut(s) 988, 1678, 1900
BstV1I GCAGC 4 cut(s) 1271, 1476, 1820, 2132
BstV2I GAAGAC 2 cut(s) 976, 2040
BstX2I RGATCY 2 cut(s) 327, 535
BstYI RGATCY 2 cut(s) 327, 535
BstZI CGGCCG 1 cut(s) 378
BsuRI GGCC 9 cut(s) 362, 380, 426, 1083, 1112, 1445, 1610, 1906, 1982
BtgI CCRYGG 3 cut(s) 596, 1579, 1617
BtsCI GGATG 2 cut(s) 535, 1478
BtsIMutI CAGTG 4 cut(s) 267, 341, 1108, 2000
Cac8I GCNNGC 3 cut(s) 360, 378, 1660
CaiI CAGNNNCTG 1 cut(s) 1246
CciI TCATGA 1 cut(s) 1045
CfoI GCGC 1 cut(s) 376
Cfr10I RCCGGY 1 cut(s) 376
Cfr13I GGNCC 4 cut(s) 384, 1082, 1111, 2142
CsiI ACCWGGT 1 cut(s) 201
Csp6I GTAC 4 cut(s) 346, 468, 1040, 1099
CspCI CAANNNNNGTGG 4 cut(s) 1587, 1622, 1959, 1994
CviAII CATG 8 cut(s) 460, 551, 597, 1046, 1436, 1580, 1618, 1627
CviQI GTAC 4 cut(s) 346, 468, 1040, 1099
DdeI CTNAG 6 cut(s) 513, 668, 727, 775, 873, 1286
DpnI GATC 8 cut(s) 329, 537, 710, 735, 792, 812, 1055, 1893
DpnII GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
EaeI YGGCCR 2 cut(s) 378, 1608
EagI CGGCCG 1 cut(s) 378
Eam1104I CTCTTC 5 cut(s) 124, 514, 840, 989, 1995
EarI CTCTTC 5 cut(s) 124, 514, 840, 989, 1995
EciI GGCGGA 1 cut(s) 245
Ecl136II GAGCTC 1 cut(s) 1780
EclXI CGGCCG 1 cut(s) 378
Eco130I CCWWGG 5 cut(s) 596, 1085, 1468, 1579, 1617
Eco147I AGGCCT 1 cut(s) 1906
Eco24I GRGCYC 1 cut(s) 1782
Eco32I GATATC 3 cut(s) 502, 1224, 1501
Eco47I GGWCC 2 cut(s) 384, 2142
Eco52I CGGCCG 1 cut(s) 378
Eco53kI GAGCTC 1 cut(s) 1780
Eco57I CTGAAG 3 cut(s) 1080, 1268, 2034
Eco88I CYCGRG 2 cut(s) 323, 1447
EcoICRI GAGCTC 1 cut(s) 1780
EcoO109I RGGNCCY 2 cut(s) 1082, 2142
EcoRII CCWGG 2 cut(s) 201, 702
EcoRV GATATC 3 cut(s) 502, 1224, 1501
EcoT14I CCWWGG 5 cut(s) 596, 1085, 1468, 1579, 1617
EcoT38I GRGCYC 1 cut(s) 1782
ErhI CCWWGG 5 cut(s) 596, 1085, 1468, 1579, 1617
FaeI CATG 8 cut(s) 463, 554, 600, 1049, 1439, 1583, 1621, 1630
FaqI GGGAC 3 cut(s) 13, 1090, 1152
FatI CATG 8 cut(s) 459, 550, 596, 1045, 1435, 1579, 1617, 1626
FauI CCCGC 1 cut(s) 1820
FbaI TGATCA 2 cut(s) 708, 790
FblI GTMKAC 3 cut(s) 1347, 1575, 1764
Fnu4HI GCNGC 5 cut(s) 780, 1260, 1490, 1809, 2121
FokI GGATG 2 cut(s) 542, 1485
FriOI GRGCYC 1 cut(s) 1782
Fsp4HI GCNGC 5 cut(s) 780, 1260, 1490, 1809, 2121
FspBI CTAG 9 cut(s) 371, 917, 1035, 1086, 1122, 1659, 2031, 2130, 2156
GlaI GCGC 1 cut(s) 375
GluI GCNGC 5 cut(s) 780, 1260, 1490, 1809, 2121
HaeII RGCGCY 1 cut(s) 377
HaeIII GGCC 9 cut(s) 362, 380, 426, 1083, 1112, 1445, 1610, 1906, 1982
HapII CCGG 3 cut(s) 377, 381, 1611
HhaI GCGC 1 cut(s) 376
Hin1II CATG 8 cut(s) 463, 554, 600, 1049, 1439, 1583, 1621, 1630
Hin6I GCGC 1 cut(s) 374
HinP1I GCGC 1 cut(s) 374
HincII GTYRAC 3 cut(s) 436, 1407, 1765
HindII GTYRAC 3 cut(s) 436, 1407, 1765
HindIII AAGCTT 1 cut(s) 1145
HinfI GANTC 6 cut(s) 650, 830, 1297, 1376, 1526, 2045
HpaI GTTAAC 1 cut(s) 1407
HpaII CCGG 3 cut(s) 377, 381, 1611
HphI GGTGA 5 cut(s) 718, 800, 2054, 2077, 2092
Hpy166II GTNNAC 7 cut(s) 436, 1174, 1348, 1407, 1576, 1765, 2085
Hpy188I TCNGA 5 cut(s) 179, 516, 669, 795, 1296
Hpy188III TCNNGA 9 cut(s) 197, 872, 897, 1046, 1449, 1889, 2052, 2130, 2156
Hpy8I GTNNAC 7 cut(s) 436, 1174, 1348, 1407, 1576, 1765, 2085
Hpy99I CGWCG 2 cut(s) 401, 529
HpyCH4III ACNGT 9 cut(s) 69, 345, 640, 883, 1103, 1367, 1901, 2004, 2082
HpyCH4IV ACGT 3 cut(s) 396, 686, 1206
HpyCH4V TGCA 8 cut(s) 83, 990, 1118, 1259, 1306, 1433, 1492, 1594
HpyF10VI GCNNNNNNNGC 1 cut(s) 423
HpyF3I CTNAG 6 cut(s) 513, 668, 727, 775, 873, 1286
HpySE526I ACGT 3 cut(s) 396, 686, 1206
Hsp92II CATG 8 cut(s) 463, 554, 600, 1049, 1439, 1583, 1621, 1630
HspAI GCGC 1 cut(s) 374
KroI GCCGGC 1 cut(s) 376
KroNI GCCGGC 1 cut(s) 378
Ksp22I TGATCA 2 cut(s) 708, 790
KspAI GTTAAC 1 cut(s) 1407
Kzo9I GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
LguI GCTCTTC 1 cut(s) 1995
LmnI GCTCC 4 cut(s) 216, 323, 822, 1777
Lsp1109I GCAGC 4 cut(s) 1271, 1476, 1820, 2132
LweI GCATC 4 cut(s) 145, 567, 1300, 1347
MabI ACCWGGT 1 cut(s) 201
MaeI CTAG 9 cut(s) 371, 917, 1035, 1086, 1122, 1659, 2031, 2130, 2156
MaeII ACGT 3 cut(s) 396, 686, 1206
MaeIII GTNAC 5 cut(s) 124, 197, 644, 1642, 2021
MalI GATC 8 cut(s) 329, 537, 710, 735, 792, 812, 1055, 1893
MboI GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
MfeI CAATTG 3 cut(s) 44, 1602, 1725
MflI RGATCY 2 cut(s) 327, 535
MhlI GDGCHC 2 cut(s) 196, 1782
MlyI GAGTC 2 cut(s) 644, 2054
MmeI TCCRAC 3 cut(s) 202, 892, 1503
MroNI GCCGGC 1 cut(s) 376
MseI TTAA 7 cut(s) 135, 612, 1215, 1406, 1536, 1859, 1935
MslI CAYNNNNRTG 1 cut(s) 1737
MspI CCGG 3 cut(s) 377, 381, 1611
MspR9I CCNGG 3 cut(s) 203, 382, 704
MunI CAATTG 3 cut(s) 44, 1602, 1725
MvaI CCWGG 2 cut(s) 203, 704
MwoI GCNNNNNNNGC 1 cut(s) 423
NaeI GCCGGC 1 cut(s) 378
NciI CCSGG 1 cut(s) 382
NcoI CCATGG 3 cut(s) 596, 1579, 1617
NdeII GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
NgoMIV GCCGGC 1 cut(s) 376
NheI GCTAGC 1 cut(s) 1658
NlaIII CATG 8 cut(s) 463, 554, 600, 1049, 1439, 1583, 1621, 1630
NlaIV GGNNCC 4 cut(s) 319, 385, 1615, 2143
NmuCI GTSAC 2 cut(s) 197, 2021
NspV TTCGAA 1 cut(s) 1941
PagI TCATGA 1 cut(s) 1045
PceI AGGCCT 1 cut(s) 1906
PciSI GCTCTTC 1 cut(s) 1995
PdiI GCCGGC 1 cut(s) 378
PfeI GAWTC 4 cut(s) 830, 1297, 1376, 1526
PkrI GCNGC 5 cut(s) 781, 1261, 1491, 1810, 2122
PleI GAGTC 2 cut(s) 644, 2053
PpsI GAGTC 2 cut(s) 644, 2053
Ppu21I YACGTR 1 cut(s) 1207
PpuMI RGGWCCY 1 cut(s) 2142
PshBI ATTAAT 1 cut(s) 135
Psp124BI GAGCTC 1 cut(s) 1782
Psp5II RGGWCCY 1 cut(s) 2142
Psp6I CCWGG 2 cut(s) 201, 702
PspGI CCWGG 2 cut(s) 201, 702
PspN4I GGNNCC 4 cut(s) 319, 385, 1615, 2143
PspPI GGNCC 4 cut(s) 384, 1082, 1111, 2142
PspPPI RGGWCCY 1 cut(s) 2142
PstI CTGCAG 1 cut(s) 992
PstNI CAGNNNCTG 1 cut(s) 1246
PsuI RGATCY 2 cut(s) 327, 535
RsaI GTAC 4 cut(s) 347, 469, 1041, 1100
RsaNI GTAC 4 cut(s) 346, 468, 1040, 1099
RseI CAYNNNNRTG 1 cut(s) 1737
SacI GAGCTC 1 cut(s) 1782
SalI GTCGAC 1 cut(s) 1763
SapI GCTCTTC 1 cut(s) 1995
SaqAI TTAA 7 cut(s) 135, 612, 1215, 1406, 1536, 1859, 1935
SatI GCNGC 5 cut(s) 780, 1260, 1490, 1809, 2121
Sau3AI GATC 8 cut(s) 327, 535, 708, 733, 790, 810, 1053, 1891
Sau96I GGNCC 4 cut(s) 384, 1082, 1111, 2142
ScaI AGTACT 1 cut(s) 469
SchI GAGTC 2 cut(s) 644, 2054
ScrFI CCNGG 3 cut(s) 203, 382, 704
SduI GDGCHC 2 cut(s) 196, 1782
SexAI ACCWGGT 1 cut(s) 201
SfaNI GCATC 4 cut(s) 145, 567, 1300, 1347
SfcI CTRYAG 3 cut(s) 988, 1678, 1900
SfuI TTCGAA 1 cut(s) 1941
SinI GGWCC 2 cut(s) 384, 2142
SmiMI CAYNNNNRTG 1 cut(s) 1737
SmlI CTYRAG 2 cut(s) 292, 575
SmoI CTYRAG 2 cut(s) 292, 575
SpeI ACTAGT 2 cut(s) 916, 1121
SseBI AGGCCT 1 cut(s) 1906
SsiI CCGC 5 cut(s) 22, 256, 488, 780, 1827
SspI AATATT 1 cut(s) 586
SspMI CTAG 9 cut(s) 371, 917, 1035, 1086, 1122, 1659, 2031, 2130, 2156
SstI GAGCTC 1 cut(s) 1782
StuI AGGCCT 1 cut(s) 1906
StyD4I CCNGG 3 cut(s) 201, 380, 702
StyI CCWWGG 5 cut(s) 596, 1085, 1468, 1579, 1617
TaaI ACNGT 9 cut(s) 69, 345, 640, 883, 1103, 1367, 1901, 2004, 2082
TaiI ACGT 3 cut(s) 399, 689, 1209
TaqI TCGA 9 cut(s) 464, 492, 524, 561, 659, 741, 1764, 1941, 2006
TatI WGTACW 1 cut(s) 467
TauI GCSGC 1 cut(s) 782
TfiI GAWTC 4 cut(s) 830, 1297, 1376, 1526
Tru1I TTAA 7 cut(s) 135, 612, 1215, 1406, 1536, 1859, 1935
Tru9I TTAA 7 cut(s) 135, 612, 1215, 1406, 1536, 1859, 1935
TscAI CASTG 4 cut(s) 274, 348, 1108, 2007
TseFI GTSAC 2 cut(s) 197, 2021
TseI GCWGC 4 cut(s) 1259, 1489, 1808, 2120
Tsp45I GTSAC 2 cut(s) 197, 2021
TspDTI ATGAA 6 cut(s) 828, 1034, 1174, 1211, 1341, 1755
TspGWI ACGGA 2 cut(s) 542, 1649
TspRI CASTG 4 cut(s) 274, 348, 1108, 2007
VpaK11BI GGWCC 2 cut(s) 384, 2142
VspI ATTAAT 1 cut(s) 135
XapI RAATTY 1 cut(s) 2160
XbaI TCTAGA 2 cut(s) 2129, 2155
XcmI CCANNNNNNNNNTGG 4 cut(s) 209, 266, 1369, 1624
XmaJI CCTAGG 1 cut(s) 1085
XmiI GTMKAC 3 cut(s) 1347, 1575, 1764
XspI CTAG 9 cut(s) 371, 917, 1035, 1086, 1122, 1659, 2031, 2130, 2156
ZrmI AGTACT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.