Rroxscaffold_1G00043700

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
62402044 .. 62404194
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00043700.1

Sequence Viewer

Length: 2151 bp
ATGGTTGTCAATCACTCCGGTGACATGACATCAATCCGGTCAGGAAAACTTCGATTACTTCTTGCACCAAGACTGTATCTCTTGATCTTTCTCTTCTGTCCTTCTGCAACTCCATTAAGCTTTAATTTCCCAAGCTTTAATCAAGATGATAATATTTTCAATATAACTCGAGAAAAGGACGCCTTTATGGACAACGAATTTCTCTACCTCACCAGAAACGCAAAAGACCAGGAACCGGGTGGAATTGGTCGAGCCAGGTACTACCAGCCCTTCCTGCTCCAAGAAAATACCACCGGAAAACTGGCCGATTTCACCACAAATTTTACATTCTCCATTTATGCGCCAAATGATGCCGATTTACCATGGGGTGCCGGTGATGGACTAGCCTTCTTCTTAGCACCAAACGGGTCCGAACTCAACAGCTCAGTAGGCTTAGCTCTCGGCCTCCCCTTGTATCAACAGTACCCATTTGTGGCTGTGGAATTTGATATCTACAGGAACTACGAAGCCATCCCCAACACAAATGAAACCGTTGCCGACCCATCCGGAGATCATGTGGGTATCGACGTCAACTCTGTCAAGTCGTTGATTACCAGGCCTTGGAATGGTAGTATTATCAATGGACAAAACAATGATGTCCGGATCAGTTATAGTTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACCTTTTTGATGAATGGTACCAAAAAGATGAGCTATATTTCTTACACAGTTGATCTGAAGGATGTCTTACCCGATCGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTGAAGTTTCTGCTATATTTAAGATCGTCTCATGGAATTTTTCTTCAACTCCTCTTGTTGATAAGAATGCCAGGGACAACACTCCGGTAAGTGTACCTTCTGCTCCTGCGCCTAGCCCTATGGTTAGTTCTAATCCCAACTCCAGCAATAAAGGACTAGTTGTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTTCTTTATCTTTTGGAAGAAGAAAGAAACGACCGTCGACAGTGAAGAAGATCCTATGGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACCGGTCCCAGAAAGTTTGTGTACGGCGATTTAGTCCGGGCAACTGGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAAGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTTGAACTCATATGTAGCTGTGAAGAGGATATCCAAAGGATCTAAACAAGGAGTGAAGGAGTACGCATCAGAAGTAAGGATCATAAGTCGACTTAGGCACCGGAATCTGGTGCAACTCATTGGTTGGTGCCACAAGAAAAAAGAACTCCTGCTTGTTTACGAGTTCATGCCCAACGGCAGTTTAGATTCACATTTGTTCAAACAAAGAAGTTTGTTAACTTGGGAGGCCAGGTACAAAATAGCTAAAGGCTTGGCATCGGGGTTGCTTTACCTACACGAAGGATGGGAACAATGCGTTTTGCACAGAGACATCAAATCTAGCAATATCATGTTAGATTCCAACTTTAACGCAAAACTTGGGGATTTTGGGTTAGCTCGACTTGTGGATCATGGCAAACAATCACAAACAACGGTTTTGGCTGGAACAATGGGCTACATGGCTCCTGAATGTGTTTCTACTGGAAAAGCTAGTAAGGAAACAGATGTCTATAGTTTTGGAATCGTTGCTTTGGAGATAGCATGTGGGAGAAAACCGATTGATGTCAATATGGAAAGAGATCAAATCAATATTGTAGAATGGGTTTGGAAGCTTTATGGAGAAGGGAGAGTCATTGAAACAGCCGATCCAAAACTCTGTGGTGATTTTGATGAGAAACAAGTACAGTGTCTAATCATTGTTGGGCTGTGGTGTGCTCACCCAGACTACGTGATGAGGCCTTCGATACAACAAGCGATTCAAGTACTTAACTTCGAAGTTCCAGTGCCAATTCTTCCATCGAAATTCCCTGTGGCGACCTATTTTGCTTCTGCAGTATCGTTCTCCAAGTTTTCCGATAATAATAGTGGTTCAAGTATAGGTCAAAGCGAGCCTTCTACCAATGGTTATAGCACATATTCCTCACAGTTCACTACATCTTCTACAACAGACTCTTAA

Protein Analysis

716

Amino Acids

78.95

Weight (kDa)

5.75

Isoelectric Point (pI)

31.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 289 1.4e-57 Legume lectin domain
Lectin_L-type_dom PF18483 102 - 269 1.2e-11 Legume lectin beta-barrel domain
Pkinase PF00069 385 - 652 3e-53 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 387 - 592 2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1200
AatII GACGTC 1 cut(s) 570
Acc65I GGTACC 1 cut(s) 704
AccB1I GGYRCC 4 cut(s) 368, 704, 1314, 1344
AccB7I CCANNNNNTGG 1 cut(s) 600
AccI GTMKAC 2 cut(s) 1044, 1306
AccIII TCCGGA 2 cut(s) 545, 639
AclWI GGATC 6 cut(s) 650, 1052, 1264, 1304, 1611, 1835
AcoI YGGCCR 2 cut(s) 303, 1174
AcsI RAATTY 6 cut(s) 197, 319, 482, 829, 1088, 1997
AcuI CTGAAG 1 cut(s) 764
AcyI GRCGYC 2 cut(s) 180, 567
AfaI GTAC 9 cut(s) 260, 464, 706, 888, 1124, 1280, 1451, 1878, 1959
AfiI CCNNNNNNNGG 6 cut(s) 235, 472, 600, 605, 1067, 1324
AgeI ACCGGT 1 cut(s) 1103
AhlI ACTAGT 1 cut(s) 949
AjnI CCWGG 5 cut(s) 228, 254, 593, 863, 1445
AjuI GAANNNNNNNTTGG 2 cut(s) 1155, 1187
AleI CACNNNNGTG 1 cut(s) 18
Alw21I GWGCWC 1 cut(s) 1912
Alw26I GTCTC 2 cut(s) 826, 1518
AlwI GGATC 6 cut(s) 650, 1052, 1264, 1304, 1611, 1835
Ama87I CYCGRG 1 cut(s) 168
Aor13HI TCCGGA 2 cut(s) 545, 639
AoxI GGCC 6 cut(s) 303, 442, 596, 1174, 1443, 1931
ApoI RAATTY 6 cut(s) 197, 319, 482, 829, 1088, 1997
ArsI GACNNNNNNTTYG 2 cut(s) 1073, 1105
AsiGI ACCGGT 1 cut(s) 1103
Asp718I GGTACC 1 cut(s) 704
AspLEI GCGC 2 cut(s) 343, 904
AspS9I GGNCC 3 cut(s) 408, 1101, 1106
AsuC2I CCSGG 2 cut(s) 237, 1139
AsuHPI GGTGA 8 cut(s) 32, 202, 304, 386, 806, 1082, 1868, 1904
AsuII TTCGAA 1 cut(s) 1968
AvaI CYCGRG 1 cut(s) 168
AvaII GGWCC 3 cut(s) 408, 1101, 1106
BalI TGGCCA 1 cut(s) 1176
BanI GGYRCC 4 cut(s) 368, 704, 1314, 1344
BbsI GAAGAC 1 cut(s) 1000
Bbv12I GWGCWC 1 cut(s) 1912
BccI CCATC 5 cut(s) 371, 518, 550, 1494, 1999
BceAI ACGGC 2 cut(s) 1141, 1408
BciT130I CCWGG 5 cut(s) 230, 256, 595, 865, 1447
BcnI CCSGG 2 cut(s) 237, 1139
BcoDI GTCTC 2 cut(s) 826, 1518
BcuI ACTAGT 1 cut(s) 949
BfaI CTAG 7 cut(s) 383, 657, 906, 950, 986, 1536, 1686
BfmI CTRYAG 3 cut(s) 493, 1705, 2025
BlpI GCTNAGC 1 cut(s) 433
BmcAI AGTACT 1 cut(s) 1959
Bme1390I CCNGG 7 cut(s) 230, 237, 256, 595, 865, 1139, 1447
Bme18I GGWCC 3 cut(s) 408, 1101, 1106
BmeT110I CYCGRG 1 cut(s) 168
BmgT120I GGNCC 3 cut(s) 408, 1101, 1106
BmiI GGNNCC 9 cut(s) 234, 370, 409, 706, 1102, 1108, 1316, 1346, 1659
BmrFI CCNGG 7 cut(s) 230, 237, 256, 595, 865, 1139, 1447
BmsI GCATC 4 cut(s) 340, 1063, 1292, 1481
BpiI GAAGAC 1 cut(s) 1000
BpmI CTGGAG 1 cut(s) 919
Bpu1102I GCTNAGC 1 cut(s) 433
Bpu14I TTCGAA 1 cut(s) 1968
BpuMI CCSGG 2 cut(s) 237, 1139
BsaAI YACGTR 1 cut(s) 1924
BsaHI GRCGYC 2 cut(s) 180, 567
BsaJI CCNNGG 4 cut(s) 362, 599, 864, 1177
BsaWI WCCGGW 8 cut(s) 17, 36, 293, 545, 639, 877, 1103, 1317
BsaXI ACNNNNNCTCC 4 cut(s) 540, 570, 1433, 1463
Bsc4I CCNNNNNNNGG 6 cut(s) 235, 472, 600, 605, 1067, 1324
Bse118I RCCGGY 2 cut(s) 371, 1103
Bse1I ACTGG 4 cut(s) 306, 1150, 1681, 1976
BseAI TCCGGA 2 cut(s) 545, 639
BseBI CCWGG 5 cut(s) 230, 256, 595, 865, 1447
BseDI CCNNGG 4 cut(s) 362, 599, 864, 1177
BseGI GGATG 4 cut(s) 510, 542, 754, 1505
BseLI CCNNNNNNNGG 6 cut(s) 235, 472, 600, 605, 1067, 1324
BseMII CTCAG 1 cut(s) 438
BseNI ACTGG 4 cut(s) 306, 1150, 1681, 1976
BseRI GAGGAG 1 cut(s) 834
Bsh1285I CGRYCG 2 cut(s) 763, 1041
BshFI GGCC 6 cut(s) 305, 444, 598, 1176, 1445, 1933
BshNI GGYRCC 4 cut(s) 368, 704, 1314, 1344
BshTI ACCGGT 1 cut(s) 1103
BsiEI CGRYCG 2 cut(s) 763, 1041
BsiHKAI GWGCWC 1 cut(s) 1912
BsiHKCI CYCGRG 1 cut(s) 168
BslFI GGGAC 3 cut(s) 881, 1092, 1114
BslI CCNNNNNNNGG 6 cut(s) 235, 472, 600, 605, 1067, 1324
BsmAI GTCTC 2 cut(s) 826, 1518
BsmBI CGTCTC 1 cut(s) 826
BsmFI GGGAC 3 cut(s) 881, 1092, 1114
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 6 cut(s) 305, 444, 598, 1176, 1445, 1933
BsoBI CYCGRG 1 cut(s) 168
Bsp119I TTCGAA 1 cut(s) 1968
Bsp1286I GDGCHC 1 cut(s) 1912
Bsp13I TCCGGA 2 cut(s) 545, 639
Bsp1720I GCTNAGC 1 cut(s) 433
Bsp19I CCATGG 1 cut(s) 362
BspANI GGCC 6 cut(s) 305, 444, 598, 1176, 1445, 1933
BspCNI CTCAG 1 cut(s) 437
BspEI TCCGGA 2 cut(s) 545, 639
BspLI GGNNCC 9 cut(s) 234, 370, 409, 706, 1102, 1108, 1316, 1346, 1659
BspMAI CTGCAG 1 cut(s) 2029
BspPI GGATC 6 cut(s) 650, 1052, 1264, 1304, 1611, 1835
BspT104I TTCGAA 1 cut(s) 1968
BspT107I GGYRCC 4 cut(s) 368, 704, 1314, 1344
BsrFI RCCGGY 2 cut(s) 371, 1103
BsrI ACTGG 4 cut(s) 306, 1150, 1681, 1976
BssAI RCCGGY 2 cut(s) 371, 1103
BssECI CCNNGG 4 cut(s) 362, 599, 864, 1177
BssNI GRCGYC 2 cut(s) 180, 567
BssT1I CCWWGG 3 cut(s) 362, 599, 1177
Bst2UI CCWGG 5 cut(s) 230, 256, 595, 865, 1447
Bst4CI ACNGT 9 cut(s) 75, 462, 532, 736, 1042, 1049, 1630, 1881, 2121
Bst6I CTCTTC 2 cut(s) 98, 1235
BstACI GRCGYC 2 cut(s) 180, 567
BstBAI YACGTR 1 cut(s) 1924
BstBI TTCGAA 1 cut(s) 1968
BstC8I GCNNGC 1 cut(s) 2084
BstDEI CTNAG 5 cut(s) 394, 424, 433, 671, 1310
BstDSI CCRYGG 1 cut(s) 362
BstF5I GGATG 4 cut(s) 510, 542, 754, 1505
BstHHI GCGC 2 cut(s) 343, 904
BstMAI GTCTC 2 cut(s) 826, 1518
BstMCI CGRYCG 2 cut(s) 763, 1041
BstMWI GCNNNNNNNGC 2 cut(s) 274, 429
BstNI CCWGG 5 cut(s) 230, 256, 595, 865, 1447
BstNSI RCATGY 1 cut(s) 1740
BstSCI CCNGG 7 cut(s) 228, 235, 254, 593, 863, 1137, 1445
BstSFI CTRYAG 3 cut(s) 493, 1705, 2025
BstV2I GAAGAC 1 cut(s) 1000
BstX2I RGATCY 2 cut(s) 1057, 1256
BstYI RGATCY 2 cut(s) 1057, 1256
BsuRI GGCC 6 cut(s) 305, 444, 598, 1176, 1445, 1933
BtgI CCRYGG 1 cut(s) 362
BtsCI GGATG 4 cut(s) 510, 542, 754, 1505
BtsIMutI CAGTG 4 cut(s) 1054, 1077, 1886, 1983
Cac8I GCNNGC 1 cut(s) 2084
CfoI GCGC 2 cut(s) 343, 904
Cfr10I RCCGGY 2 cut(s) 371, 1103
Cfr13I GGNCC 3 cut(s) 408, 1101, 1106
CseI GACGC 1 cut(s) 188
Csp6I GTAC 9 cut(s) 259, 463, 705, 887, 1123, 1279, 1450, 1877, 1958
CspAI ACCGGT 1 cut(s) 1103
CviAII CATG 9 cut(s) 25, 363, 554, 825, 1384, 1546, 1607, 1654, 1737
CviQI GTAC 9 cut(s) 259, 463, 705, 887, 1123, 1279, 1450, 1877, 1958
DdeI CTNAG 5 cut(s) 394, 424, 433, 671, 1310
EaeI YGGCCR 2 cut(s) 303, 1174
Eam1104I CTCTTC 2 cut(s) 98, 1235
EarI CTCTTC 2 cut(s) 98, 1235
Eco130I CCWWGG 3 cut(s) 362, 599, 1177
Eco147I AGGCCT 2 cut(s) 598, 1933
Eco32I GATATC 2 cut(s) 490, 1248
Eco47I GGWCC 3 cut(s) 408, 1101, 1106
Eco57I CTGAAG 1 cut(s) 764
Eco88I CYCGRG 1 cut(s) 168
EcoRII CCWGG 5 cut(s) 228, 254, 593, 863, 1445
EcoRV GATATC 2 cut(s) 490, 1248
EcoT14I CCWWGG 3 cut(s) 362, 599, 1177
ErhI CCWWGG 3 cut(s) 362, 599, 1177
Esp3I CGTCTC 1 cut(s) 826
FaeI CATG 9 cut(s) 28, 366, 557, 828, 1387, 1549, 1610, 1657, 1740
FaqI GGGAC 3 cut(s) 881, 1092, 1114
FatI CATG 9 cut(s) 24, 362, 553, 824, 1383, 1545, 1606, 1653, 1736
FauNDI CATATG 1 cut(s) 1228
FblI GTMKAC 2 cut(s) 1044, 1306
FokI GGATG 4 cut(s) 497, 529, 761, 1512
FspBI CTAG 7 cut(s) 383, 657, 906, 950, 986, 1536, 1686
GlaI GCGC 2 cut(s) 342, 903
GsuI CTGGAG 1 cut(s) 919
HaeIII GGCC 6 cut(s) 305, 444, 598, 1176, 1445, 1933
HgaI GACGC 1 cut(s) 188
HhaI GCGC 2 cut(s) 343, 904
Hin1I GRCGYC 2 cut(s) 180, 567
Hin1II CATG 9 cut(s) 28, 366, 557, 828, 1387, 1549, 1610, 1657, 1740
Hin6I GCGC 2 cut(s) 341, 902
HinP1I GCGC 2 cut(s) 341, 902
HincII GTYRAC 4 cut(s) 571, 1045, 1307, 1434
HindII GTYRAC 4 cut(s) 571, 1045, 1307, 1434
HindIII AAGCTT 4 cut(s) 118, 133, 1169, 1805
HinfI GANTC 8 cut(s) 1206, 1321, 1403, 1553, 1716, 1824, 1951, 2144
HpaI GTTAAC 1 cut(s) 1434
HphI GGTGA 8 cut(s) 32, 202, 304, 386, 806, 1082, 1868, 1904
Hpy166II GTNNAC 8 cut(s) 571, 887, 1045, 1123, 1307, 1375, 1434, 2124
Hpy188I TCNGA 4 cut(s) 412, 744, 1288, 2050
Hpy188III TCNNGA 8 cut(s) 42, 82, 143, 170, 546, 640, 1157, 1661
Hpy8I GTNNAC 8 cut(s) 571, 887, 1045, 1123, 1307, 1375, 1434, 2124
Hpy99I CGWCG 2 cut(s) 569, 1046
HpyCH4III ACNGT 9 cut(s) 75, 462, 532, 736, 1042, 1049, 1630, 1881, 2121
HpyCH4IV ACGT 2 cut(s) 567, 1923
HpyCH4V TGCA 6 cut(s) 65, 107, 974, 1330, 1519, 2027
HpyF10VI GCNNNNNNNGC 2 cut(s) 274, 429
HpyF3I CTNAG 5 cut(s) 394, 424, 433, 671, 1310
HpySE526I ACGT 2 cut(s) 567, 1923
Hsp92I GRCGYC 2 cut(s) 180, 567
Hsp92II CATG 9 cut(s) 28, 366, 557, 828, 1387, 1549, 1610, 1657, 1740
HspAI GCGC 2 cut(s) 341, 902
Kpn2I TCCGGA 2 cut(s) 545, 639
KpnI GGTACC 1 cut(s) 708
KspAI GTTAAC 1 cut(s) 1434
LmnI GCTCC 3 cut(s) 282, 901, 1663
LweI GCATC 4 cut(s) 340, 1063, 1292, 1481
MaeI CTAG 7 cut(s) 383, 657, 906, 950, 986, 1536, 1686
MaeII ACGT 2 cut(s) 567, 1923
MaeIII GTNAC 2 cut(s) 20, 1148
MflI RGATCY 2 cut(s) 1057, 1256
MhlI GDGCHC 1 cut(s) 1912
MlsI TGGCCA 1 cut(s) 1176
MluCI AATT 9 cut(s) 124, 197, 243, 319, 482, 829, 1088, 1983, 1997
MluNI TGGCCA 1 cut(s) 1176
MlyI GAGTC 2 cut(s) 1833, 2138
MmeI TCCRAC 1 cut(s) 1581
MnlI CCTC 9 cut(s) 218, 455, 855, 1153, 1175, 1236, 1435, 1923, 2125
Mox20I TGGCCA 1 cut(s) 1176
MroI TCCGGA 2 cut(s) 545, 639
MscI TGGCCA 1 cut(s) 1176
MseI TTAA 8 cut(s) 116, 123, 138, 813, 1433, 1563, 1962, 2149
MslI CAYNNNNRTG 1 cut(s) 18
Msp20I TGGCCA 1 cut(s) 1176
MspR9I CCNGG 7 cut(s) 230, 237, 256, 595, 865, 1139, 1447
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 5 cut(s) 230, 256, 595, 865, 1447
MwoI GCNNNNNNNGC 2 cut(s) 274, 429
NciI CCSGG 2 cut(s) 237, 1139
NcoI CCATGG 1 cut(s) 362
NdeI CATATG 1 cut(s) 1228
NlaIII CATG 9 cut(s) 28, 366, 557, 828, 1387, 1549, 1610, 1657, 1740
NlaIV GGNNCC 9 cut(s) 234, 370, 409, 706, 1102, 1108, 1316, 1346, 1659
NmeAIII GCCGAG 2 cut(s) 420, 761
NmuCI GTSAC 1 cut(s) 20
NspI RCATGY 1 cut(s) 1740
NspV TTCGAA 1 cut(s) 1968
OliI CACNNNNGTG 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 168
PceI AGGCCT 2 cut(s) 598, 1933
PctI GAATGC 1 cut(s) 865
PfeI GAWTC 6 cut(s) 1206, 1321, 1403, 1553, 1716, 1951
PflMI CCANNNNNTGG 1 cut(s) 600
PinAI ACCGGT 1 cut(s) 1103
Ple19I CGATCG 1 cut(s) 763
PleI GAGTC 2 cut(s) 1832, 2138
PpsI GAGTC 2 cut(s) 1832, 2138
Ppu21I YACGTR 1 cut(s) 1924
PsiI TTATAA 1 cut(s) 1200
Psp6I CCWGG 5 cut(s) 228, 254, 593, 863, 1445
PspGI CCWGG 5 cut(s) 228, 254, 593, 863, 1445
PspN4I GGNNCC 9 cut(s) 234, 370, 409, 706, 1102, 1108, 1316, 1346, 1659
PspPI GGNCC 3 cut(s) 408, 1101, 1106
PstI CTGCAG 1 cut(s) 2029
PsuI RGATCY 2 cut(s) 1057, 1256
PvuI CGATCG 1 cut(s) 763
RsaI GTAC 9 cut(s) 260, 464, 706, 888, 1124, 1280, 1451, 1878, 1959
RsaNI GTAC 9 cut(s) 259, 463, 705, 887, 1123, 1279, 1450, 1877, 1958
RseI CAYNNNNRTG 1 cut(s) 18
SalI GTCGAC 2 cut(s) 1043, 1305
SaqAI TTAA 8 cut(s) 116, 123, 138, 813, 1433, 1563, 1962, 2149
Sau96I GGNCC 3 cut(s) 408, 1101, 1106
ScaI AGTACT 1 cut(s) 1959
SchI GAGTC 2 cut(s) 1833, 2138
ScrFI CCNGG 7 cut(s) 230, 237, 256, 595, 865, 1139, 1447
SduI GDGCHC 1 cut(s) 1912
SfaNI GCATC 4 cut(s) 340, 1063, 1292, 1481
SfcI CTRYAG 3 cut(s) 493, 1705, 2025
Sfr274I CTCGAG 1 cut(s) 168
SfuI TTCGAA 1 cut(s) 1968
SinI GGWCC 3 cut(s) 408, 1101, 1106
SlaI CTCGAG 1 cut(s) 168
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 1 cut(s) 168
SmoI CTYRAG 1 cut(s) 168
SpeI ACTAGT 1 cut(s) 949
Sse9I AATT 9 cut(s) 124, 197, 243, 319, 482, 829, 1088, 1983, 1997
SseBI AGGCCT 2 cut(s) 598, 1933
SspI AATATT 2 cut(s) 154, 1786
SspMI CTAG 7 cut(s) 383, 657, 906, 950, 986, 1536, 1686
StuI AGGCCT 2 cut(s) 598, 1933
StyD4I CCNGG 7 cut(s) 228, 235, 254, 593, 863, 1137, 1445
StyI CCWWGG 3 cut(s) 362, 599, 1177
TaaI ACNGT 9 cut(s) 75, 462, 532, 736, 1042, 1049, 1630, 1881, 2121
TaiI ACGT 2 cut(s) 570, 1926
TasI AATT 9 cut(s) 124, 197, 243, 319, 482, 829, 1088, 1983, 1997
TatI WGTACW 2 cut(s) 1876, 1957
TfiI GAWTC 6 cut(s) 1206, 1321, 1403, 1553, 1716, 1951
Tru1I TTAA 8 cut(s) 116, 123, 138, 813, 1433, 1563, 1962, 2149
Tru9I TTAA 8 cut(s) 116, 123, 138, 813, 1433, 1563, 1962, 2149
TscAI CASTG 4 cut(s) 1054, 1084, 1886, 1983
TseFI GTSAC 1 cut(s) 20
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 5 cut(s) 540, 713, 1101, 1198, 1372
TspRI CASTG 4 cut(s) 1054, 1084, 1886, 1983
Van91I CCANNNNNTGG 1 cut(s) 600
VpaK11BI GGWCC 3 cut(s) 408, 1101, 1106
XapI RAATTY 6 cut(s) 197, 319, 482, 829, 1088, 1997
XceI RCATGY 1 cut(s) 1740
XcmI CCANNNNNNNNNTGG 3 cut(s) 236, 298, 1184
XhoI CTCGAG 1 cut(s) 168
XmiI GTMKAC 2 cut(s) 1044, 1306
XspI CTAG 7 cut(s) 383, 657, 906, 950, 986, 1536, 1686
ZraI GACGTC 1 cut(s) 568
ZrmI AGTACT 1 cut(s) 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.