RchiOBHm_Chr5g0032461

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
26124614 .. 26127819
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31164

Sequence Viewer

Length: 2163 bp
ATGGCTGTCAACAACACATTGCGGTTGTCCCTAAAGCAGCTTCAATTGCTTCTTCTTCTCTTATTACTGTTGCCCTTCTCTGCAACTCCATTGACCTTCAATTTCCCCAGCTTCCCCCTTAATGTTACCGCCAATATATCTATGGAGGGAGATGCTTTGCCCGATGGGTCCCTCCGCCTCACCAAGAGTACCGTCGACGTTCAATGGGATCAAAGCGTCGGCCGAGCCACCTACTGCCAACCTTTCCTACTCCGCCAAAACTCCACTAGAAAACTCGCTGATTTTACCTCAAGTTTCACATTCGTCATTGACTCCGTTGGCTACACCATGTACGGTGATGGGCTGGCCTTCTTCCTGGCGCCGGCCGGCTCCTTACTAAACAACAAATTAGGAGTAGGTAGCAGTTTTGGCCTCCCTTTCAACATTACCCTTGCAAGCTATTCCATGACGAGCACTGAATACCCATTTGTGGCGGTCGAGTTTGATATCTTCCCTTCTCAGGAAGAATCGAGGGATGGGCCTATAAACTACACTCATGCGGGCATCGACATCAACTCCCTCACGTCTTATGTTACCGAGCCATGGGATGGTGGTATCAGGGAAGGAAAAGAAAATAATGCCACAATTAGTTACAACTCCACCTCGGAAAATCTCAGTGTTGCCTTCACTACGATTCAAAATGTAGATGGAGACGAAGTCCAGTTGATCAAAAGTATGTATTTCTTGGTTGATCTGCTTCAATACTTGCCCGATAGGGTCATAGTTGGGTTCTCTGCTTCAACTGGTGCCTATATTGCTCAGCATAAGATCGTCTCATGGAATTTTACTTCAACTCCTCTGGTTGATGATAATGCACCATCGACCACAAGGTCCAACAACGATAGAGTCAGACTAGCGGTTGGATTGGGTGTTGGTGGATGTCTTACCTTGGTTGGTGTGCTGGCTTTCGTTTGGTCCATCTTCTCCAGGAGGAGGAGGGAGAAAGATGGGGAAAGTAGTGATGATGATACCAGGGTACTTAATGATTTGATTCCTGAAGAATTCGGAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAATGAATTGGCCCTTGCAACTAATAATTTTGTACAGGAAGAAAAGCTTGGGGAGGGAGGGTTTGGTGGAGTTTACAAAGGGTTCATCAAAGATATGAACTCGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGCTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCGGCTGAGGCATCGGAATCTGGTGCAACTCGTAGGTTGGTGCCACGAAAAGAAACTCCTACTTGTCTACGAATTCATGCCCAACGGGAGCTTGGATTCTCACTTGTTCAAAGAAAAGAGCCTGTTAACTTGGGAGGTAAGATACAAAATTGCACATGGATTGGCCTCGGGATTGCTCTATCTACACCAAGGATGGGAACAATGTGTGCTGCACAGAGATATCAAATCCAGCAATGTTATGTTGGATTCCAATTTTAACACAAAACTTGGAGATTTTGGGTTAGCCAAACTTGTAGACCATGGAAAGCTCTCGCAAACAACAATTGTGGCTAGAACCATGGGCTACATGGCTATGGAATATGTTACAACGGGAAAGGCTAGCAAGGAATCAGATGTCTTTAGTTTTGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCCGTTGATTCGAGGTATGAAGAAAAGCAAATCAATTTGGTGGAGTGGGTTTGGGAGCTCTATGGAGAAGGGAAAATTATCGAAGCAGCAGACCCAAAATTGTGCGGGGATTTTGATAAGAAGCAAATGGAGTGCTTAATGATGGCAGAGACCATTGTGAGGTCGAAGATGGCTTGGATTTACGGCCAGCAGAGGAATGTCTCGGCTCAGTTGCTGCGTCTCTTTTTCCATGACTGCTTCATTGAGCTTGGCATTGAATGTGGTTTGGGGTTTTGCTCAAATCGCTTGTTTCTTTGGATTTTCCTATATGGGTGTTGTTTGGAACCTTATTTAAGTATATTCATATTATTTATAAATGTAGTGTATTATTATAATAATTACGGGAAAAGCGATCGCCTCAACGCCTTGAGGCACTCGCCTCGCGAGGCTCTAGGTGGTCGCCTTCGCCTTCGCTTTCGCATTTGA

Protein Analysis

720

Amino Acids

80.78

Weight (kDa)

6.46

Isoelectric Point (pI)

34.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 284 2.9e-54 Legume lectin domain
Pkinase PF00069 370 - 575 6.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 371 - 579 1.5e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2051, 2070
AasI GACNNNNNNGTC 1 cut(s) 868
AccB1I GGYRCC 3 cut(s) 358, 785, 1296
AccB7I CCANNNNNTGG 1 cut(s) 587
AccI GTMKAC 3 cut(s) 195, 1323, 1551
AccII CGCG 1 cut(s) 2121
AciI CCGC 8 cut(s) 22, 129, 175, 253, 473, 539, 896, 1803
AclWI GGATC 1 cut(s) 216
AcoI YGGCCR 3 cut(s) 220, 363, 1882
AcsI RAATTY 3 cut(s) 820, 1040, 1328
AcuI CTGAAG 2 cut(s) 1056, 1244
AcyI GRCGYC 1 cut(s) 359
AfaI GTAC 5 cut(s) 190, 332, 1017, 1076, 1110
AfiI CCNNNNNNNGG 8 cut(s) 361, 469, 499, 582, 587, 972, 1450, 1857
AjiI CACGTC 1 cut(s) 564
AjnI CCWGG 3 cut(s) 354, 965, 1010
AjuI GAANNNNNNNTTGG 2 cut(s) 1107, 1139
Alw21I GWGCWC 2 cut(s) 455, 1758
Alw26I GTCTC 5 cut(s) 684, 817, 1841, 1903, 1922
AlwI GGATC 1 cut(s) 216
AlwNI CAGNNNCTG 1 cut(s) 1912
Ama87I CYCGRG 1 cut(s) 1423
AoxI GGCC 9 cut(s) 220, 345, 363, 409, 518, 1057, 1086, 1419, 1882
ApeKI GCWGC 5 cut(s) 37, 1235, 1465, 1784, 1912
ApoI RAATTY 3 cut(s) 820, 1040, 1328
AsiSI GCGATCGC 1 cut(s) 2092
AspA2I CCTAGG 1 cut(s) 1061
AspLEI GCGC 1 cut(s) 361
AspS9I GGNCC 6 cut(s) 168, 518, 870, 954, 1058, 1087
AsuHPI GGTGA 2 cut(s) 172, 347
AsuNHI GCTAGC 1 cut(s) 1634
AvaI CYCGRG 1 cut(s) 1423
AvaII GGWCC 3 cut(s) 168, 870, 954
AvrII CCTAGG 1 cut(s) 1061
BaeI ACNNNNGTAYC 2 cut(s) 999, 1032
BanI GGYRCC 3 cut(s) 358, 785, 1296
BanII GRGCYC 1 cut(s) 1758
BarI GAAGNNNNNNTAC 2 cut(s) 1058, 1090
Bbv12I GWGCWC 2 cut(s) 455, 1758
BbvCI CCTCAGC 1 cut(s) 1262
BbvI GCAGC 5 cut(s) 49, 1247, 1452, 1796, 1899
BceAI ACGGC 1 cut(s) 1897
BcgI CGANNNNNNTGC 2 cut(s) 2099, 2133
BciT130I CCWGG 3 cut(s) 356, 967, 1012
BclI TGATCA 1 cut(s) 705
BcoDI GTCTC 5 cut(s) 684, 817, 1841, 1903, 1922
BfaI CTAG 6 cut(s) 267, 893, 1062, 1587, 1635, 2129
BfoI RGCGCY 1 cut(s) 362
BisI GCNGC 5 cut(s) 38, 1236, 1466, 1785, 1913
BlnI CCTAGG 1 cut(s) 1061
BlpI GCTNAGC 1 cut(s) 798
BlsI GCNGC 5 cut(s) 39, 1237, 1467, 1786, 1914
Bme1390I CCNGG 3 cut(s) 356, 967, 1012
Bme18I GGWCC 3 cut(s) 168, 870, 954
BmeT110I CYCGRG 1 cut(s) 1423
BmgBI CACGTC 1 cut(s) 564
BmgT120I GGNCC 6 cut(s) 168, 518, 870, 954, 1058, 1087
BmiI GGNNCC 7 cut(s) 169, 170, 360, 370, 787, 1298, 2022
BmrFI CCNGG 3 cut(s) 356, 967, 1012
BmsI GCATC 3 cut(s) 142, 552, 1276
BmtI GCTAGC 1 cut(s) 1638
BpmI CTGGAG 1 cut(s) 949
Bpu10I CCTNAGC 1 cut(s) 1262
Bpu1102I GCTNAGC 1 cut(s) 798
BpuEI CTTGAG 2 cut(s) 274, 2125
BsaHI GRCGYC 1 cut(s) 359
BsaI GGTCTC 1 cut(s) 1841
BsaJI CCNNGG 9 cut(s) 581, 642, 927, 1011, 1061, 1422, 1444, 1555, 1593
BsaXI ACNNNNNCTCC 8 cut(s) 539, 569, 681, 711, 817, 847, 1121, 1151
Bsc4I CCNNNNNNNGG 8 cut(s) 361, 469, 499, 582, 587, 972, 1450, 1857
Bse118I RCCGGY 2 cut(s) 361, 365
Bse1I ACTGG 2 cut(s) 700, 787
Bse3DI GCAATG 2 cut(s) 17, 1495
BseBI CCWGG 3 cut(s) 356, 967, 1012
BseDI CCNNGG 9 cut(s) 581, 642, 927, 1011, 1061, 1422, 1444, 1555, 1593
BseGI GGATG 4 cut(s) 520, 592, 923, 1454
BseLI CCNNNNNNNGG 8 cut(s) 361, 469, 499, 582, 587, 972, 1450, 1857
BseMI GCAATG 2 cut(s) 17, 1495
BseMII CTCAG 5 cut(s) 512, 667, 812, 1253, 1919
BseNI ACTGG 2 cut(s) 700, 787
BseRI GAGGAG 3 cut(s) 825, 985, 988
BseX3I CGGCCG 2 cut(s) 220, 363
BseXI GCAGC 5 cut(s) 49, 1247, 1452, 1796, 1899
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 1451
Bsh1236I CGCG 1 cut(s) 2121
Bsh1285I CGRYCG 4 cut(s) 223, 366, 477, 2092
BshFI GGCC 9 cut(s) 222, 347, 365, 411, 520, 1059, 1088, 1421, 1884
BshNI GGYRCC 3 cut(s) 358, 785, 1296
BsiEI CGRYCG 4 cut(s) 223, 366, 477, 2092
BsiHKAI GWGCWC 2 cut(s) 455, 1758
BsiHKCI CYCGRG 1 cut(s) 1423
BsiSI CCGG 2 cut(s) 362, 366
BslFI GGGAC 3 cut(s) 13, 154, 1066
BslI CCNNNNNNNGG 8 cut(s) 361, 469, 499, 582, 587, 972, 1450, 1857
BsmAI GTCTC 5 cut(s) 684, 817, 1841, 1903, 1922
BsmBI CGTCTC 3 cut(s) 684, 817, 1922
BsmFI GGGAC 3 cut(s) 13, 154, 1066
BsnI GGCC 9 cut(s) 222, 347, 365, 411, 520, 1059, 1088, 1421, 1884
Bso31I GGTCTC 1 cut(s) 1841
BsoBI CYCGRG 1 cut(s) 1423
Bsp1286I GDGCHC 2 cut(s) 455, 1758
Bsp1407I TGTACA 1 cut(s) 1108
Bsp143I GATC 5 cut(s) 208, 705, 730, 807, 2089
Bsp1720I GCTNAGC 1 cut(s) 798
Bsp19I CCATGG 3 cut(s) 581, 1555, 1593
Bsp68I TCGCGA 1 cut(s) 2121
BspACI CCGC 8 cut(s) 22, 129, 175, 253, 473, 539, 896, 1803
BspANI GGCC 9 cut(s) 222, 347, 365, 411, 520, 1059, 1088, 1421, 1884
BspCNI CTCAG 5 cut(s) 511, 666, 811, 1254, 1918
BspFNI CGCG 1 cut(s) 2121
BspLI GGNNCC 7 cut(s) 169, 170, 360, 370, 787, 1298, 2022
BspOI GCTAGC 1 cut(s) 1638
BspPI GGATC 1 cut(s) 216
BspT107I GGYRCC 3 cut(s) 358, 785, 1296
BspTNI GGTCTC 1 cut(s) 1841
BsrDI GCAATG 2 cut(s) 17, 1495
BsrFI RCCGGY 2 cut(s) 361, 365
BsrGI TGTACA 1 cut(s) 1108
BsrI ACTGG 2 cut(s) 700, 787
BssAI RCCGGY 2 cut(s) 361, 365
BssECI CCNNGG 9 cut(s) 581, 642, 927, 1011, 1061, 1422, 1444, 1555, 1593
BssMI GATC 5 cut(s) 208, 705, 730, 807, 2089
BssNI GRCGYC 1 cut(s) 359
BssT1I CCWWGG 6 cut(s) 581, 927, 1061, 1444, 1555, 1593
Bst2UI CCWGG 3 cut(s) 356, 967, 1012
Bst4CI ACNGT 3 cut(s) 69, 193, 335
BstACI GRCGYC 1 cut(s) 359
BstAUI TGTACA 1 cut(s) 1108
BstC8I GCNNGC 8 cut(s) 345, 363, 367, 436, 541, 942, 1636, 1886
BstDEI CTNAG 5 cut(s) 498, 653, 798, 1262, 1905
BstDSI CCRYGG 3 cut(s) 581, 1555, 1593
BstF5I GGATG 4 cut(s) 520, 592, 923, 1454
BstFNI CGCG 1 cut(s) 2121
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 1 cut(s) 361
BstKTI GATC 5 cut(s) 211, 708, 733, 810, 2092
BstMAI GTCTC 5 cut(s) 684, 817, 1841, 1903, 1922
BstMBI GATC 5 cut(s) 208, 705, 730, 807, 2089
BstMCI CGRYCG 4 cut(s) 223, 366, 477, 2092
BstMWI GCNNNNNNNGC 4 cut(s) 46, 408, 794, 1980
BstNI CCWGG 3 cut(s) 356, 967, 1012
BstSCI CCNGG 3 cut(s) 354, 965, 1010
BstUI CGCG 1 cut(s) 2121
BstV1I GCAGC 5 cut(s) 49, 1247, 1452, 1796, 1899
BstZI CGGCCG 2 cut(s) 220, 363
BsuRI GGCC 9 cut(s) 222, 347, 365, 411, 520, 1059, 1088, 1421, 1884
BtgI CCRYGG 3 cut(s) 581, 1555, 1593
BtrI CACGTC 1 cut(s) 564
BtsCI GGATG 4 cut(s) 520, 592, 923, 1454
BtsIMutI CAGTG 2 cut(s) 453, 661
BtuMI TCGCGA 1 cut(s) 2121
Cac8I GCNNGC 8 cut(s) 345, 363, 367, 436, 541, 942, 1636, 1886
CaiI CAGNNNCTG 1 cut(s) 1912
CfoI GCGC 1 cut(s) 361
Cfr10I RCCGGY 2 cut(s) 361, 365
Cfr13I GGNCC 6 cut(s) 168, 518, 870, 954, 1058, 1087
CseI GACGC 2 cut(s) 205, 1904
Csp6I GTAC 5 cut(s) 189, 331, 1016, 1075, 1109
CspCI CAANNNNNGTGG 2 cut(s) 1563, 1598
CviQI GTAC 5 cut(s) 189, 331, 1016, 1075, 1109
DdeI CTNAG 5 cut(s) 498, 653, 798, 1262, 1905
DinI GGCGCC 1 cut(s) 360
DpnI GATC 5 cut(s) 210, 707, 732, 809, 2091
DpnII GATC 5 cut(s) 208, 705, 730, 807, 2089
DrdI GACNNNNNNGTC 1 cut(s) 868
DseDI GACNNNNNNGTC 1 cut(s) 868
EaeI YGGCCR 3 cut(s) 220, 363, 1882
EagI CGGCCG 2 cut(s) 220, 363
EciI GGCGGA 2 cut(s) 164, 242
Ecl136II GAGCTC 1 cut(s) 1756
EclXI CGGCCG 2 cut(s) 220, 363
Eco130I CCWWGG 6 cut(s) 581, 927, 1061, 1444, 1555, 1593
Eco24I GRGCYC 1 cut(s) 1758
Eco31I GGTCTC 1 cut(s) 1841
Eco32I GATATC 3 cut(s) 487, 1200, 1477
Eco47I GGWCC 3 cut(s) 168, 870, 954
Eco52I CGGCCG 2 cut(s) 220, 363
Eco53kI GAGCTC 1 cut(s) 1756
Eco57I CTGAAG 2 cut(s) 1056, 1244
Eco88I CYCGRG 1 cut(s) 1423
EcoICRI GAGCTC 1 cut(s) 1756
EcoO109I RGGNCCY 2 cut(s) 168, 1058
EcoRI GAATTC 2 cut(s) 1040, 1328
EcoRII CCWGG 3 cut(s) 354, 965, 1010
EcoRV GATATC 3 cut(s) 487, 1200, 1477
EcoT14I CCWWGG 6 cut(s) 581, 927, 1061, 1444, 1555, 1593
EcoT38I GRGCYC 1 cut(s) 1758
EgeI GGCGCC 1 cut(s) 360
EheI GGCGCC 1 cut(s) 360
ErhI CCWWGG 6 cut(s) 581, 927, 1061, 1444, 1555, 1593
Esp3I CGTCTC 3 cut(s) 684, 817, 1922
FalI AAGNNNNNCTT 2 cut(s) 1107, 1139
FaqI GGGAC 3 cut(s) 13, 154, 1066
FauI CCCGC 2 cut(s) 532, 1796
FbaI TGATCA 1 cut(s) 705
FblI GTMKAC 3 cut(s) 195, 1323, 1551
Fnu4HI GCNGC 5 cut(s) 38, 1236, 1466, 1785, 1913
FokI GGATG 4 cut(s) 527, 599, 930, 1461
FriOI GRGCYC 1 cut(s) 1758
Fsp4HI GCNGC 5 cut(s) 38, 1236, 1466, 1785, 1913
FspBI CTAG 6 cut(s) 267, 893, 1062, 1587, 1635, 2129
GlaI GCGC 1 cut(s) 360
GluI GCNGC 5 cut(s) 38, 1236, 1466, 1785, 1913
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 1 cut(s) 949
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 9 cut(s) 222, 347, 365, 411, 520, 1059, 1088, 1421, 1884
HapII CCGG 2 cut(s) 362, 366
HgaI GACGC 2 cut(s) 205, 1904
HhaI GCGC 1 cut(s) 361
Hin1I GRCGYC 1 cut(s) 359
Hin6I GCGC 1 cut(s) 359
HinP1I GCGC 1 cut(s) 359
HincII GTYRAC 3 cut(s) 10, 196, 1383
HindII GTYRAC 3 cut(s) 10, 196, 1383
HindIII AAGCTT 1 cut(s) 1121
HpaI GTTAAC 1 cut(s) 1383
HpaII CCGG 2 cut(s) 362, 366
HphI GGTGA 2 cut(s) 172, 347
Hpy166II GTNNAC 6 cut(s) 10, 196, 1150, 1324, 1383, 1552
Hpy188I TCNGA 5 cut(s) 646, 890, 1046, 1272, 1648
Hpy188III TCNNGA 4 cut(s) 500, 1034, 1425, 2120
Hpy8I GTNNAC 6 cut(s) 10, 196, 1150, 1324, 1383, 1552
Hpy99I CGWCG 3 cut(s) 197, 200, 221
HpyCH4III ACNGT 3 cut(s) 69, 193, 335
HpyCH4IV ACGT 2 cut(s) 198, 563
HpyCH4V TGCA 8 cut(s) 83, 434, 854, 1094, 1235, 1282, 1409, 1468
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 408, 794, 1980
HpyF3I CTNAG 5 cut(s) 498, 653, 798, 1262, 1905
HpySE526I ACGT 2 cut(s) 198, 563
Hsp92I GRCGYC 1 cut(s) 359
HspAI GCGC 1 cut(s) 359
KasI GGCGCC 1 cut(s) 358
KflI GGGWCCC 1 cut(s) 168
KroI GCCGGC 2 cut(s) 361, 365
KroNI GCCGGC 2 cut(s) 363, 367
Ksp22I TGATCA 1 cut(s) 705
KspAI GTTAAC 1 cut(s) 1383
Kzo9I GATC 5 cut(s) 208, 705, 730, 807, 2089
LmnI GCTCC 3 cut(s) 374, 1344, 1753
Lsp1109I GCAGC 5 cut(s) 49, 1247, 1452, 1796, 1899
LweI GCATC 3 cut(s) 142, 552, 1276
MaeI CTAG 6 cut(s) 267, 893, 1062, 1587, 1635, 2129
MaeII ACGT 2 cut(s) 198, 563
MaeIII GTNAC 4 cut(s) 124, 571, 629, 1618
MalI GATC 5 cut(s) 210, 707, 732, 809, 2091
MboI GATC 5 cut(s) 208, 705, 730, 807, 2089
MfeI CAATTG 2 cut(s) 44, 1578
MhlI GDGCHC 2 cut(s) 455, 1758
Mly113I GGCGCC 1 cut(s) 359
MlyI GAGTC 2 cut(s) 305, 894
MmeI TCCRAC 3 cut(s) 880, 897, 1479
MroNI GCCGGC 2 cut(s) 361, 365
MseI TTAA 7 cut(s) 120, 1020, 1191, 1382, 1512, 1835, 2030
MslI CAYNNNNRTG 1 cut(s) 1607
MspI CCGG 2 cut(s) 362, 366
MspR9I CCNGG 3 cut(s) 356, 967, 1012
MunI CAATTG 2 cut(s) 44, 1578
MvaI CCWGG 3 cut(s) 356, 967, 1012
MvnI CGCG 1 cut(s) 2121
MwoI GCNNNNNNNGC 4 cut(s) 46, 408, 794, 1980
NaeI GCCGGC 2 cut(s) 363, 367
NarI GGCGCC 1 cut(s) 359
NcoI CCATGG 3 cut(s) 581, 1555, 1593
NdeII GATC 5 cut(s) 208, 705, 730, 807, 2089
NgoMIV GCCGGC 2 cut(s) 361, 365
NheI GCTAGC 1 cut(s) 1634
NlaIV GGNNCC 7 cut(s) 169, 170, 360, 370, 787, 1298, 2022
NmeAIII GCCGAG 2 cut(s) 248, 1880
NruI TCGCGA 1 cut(s) 2121
PcsI WCGNNNNNNNCGW 1 cut(s) 2085
PdiI GCCGGC 2 cut(s) 363, 367
PfeI GAWTC 8 cut(s) 506, 673, 1030, 1273, 1352, 1502, 1643, 1706
PflFI GACNNNGTC 1 cut(s) 695
PflMI CCANNNNNTGG 1 cut(s) 587
PfoI TCCNGGA 1 cut(s) 965
PkrI GCNGC 5 cut(s) 39, 1237, 1467, 1786, 1914
Ple19I CGATCG 1 cut(s) 2092
PleI GAGTC 2 cut(s) 305, 893
PluTI GGCGCC 1 cut(s) 362
PpsI GAGTC 2 cut(s) 305, 893
PpuMI RGGWCCY 1 cut(s) 168
PsiI TTATAA 2 cut(s) 2051, 2070
Psp124BI GAGCTC 1 cut(s) 1758
Psp5II RGGWCCY 1 cut(s) 168
Psp6I CCWGG 3 cut(s) 354, 965, 1010
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 3 cut(s) 354, 965, 1010
PspN4I GGNNCC 7 cut(s) 169, 170, 360, 370, 787, 1298, 2022
PspPI GGNCC 6 cut(s) 168, 518, 870, 954, 1058, 1087
PspPPI RGGWCCY 1 cut(s) 168
PstNI CAGNNNCTG 1 cut(s) 1912
PsyI GACNNNGTC 1 cut(s) 695
PvuI CGATCG 1 cut(s) 2092
RgaI GCGATCGC 1 cut(s) 2092
RruI TCGCGA 1 cut(s) 2121
RsaI GTAC 5 cut(s) 190, 332, 1017, 1076, 1110
RsaNI GTAC 5 cut(s) 189, 331, 1016, 1075, 1109
RseI CAYNNNNRTG 1 cut(s) 1607
SacI GAGCTC 1 cut(s) 1758
SalI GTCGAC 1 cut(s) 194
SaqAI TTAA 7 cut(s) 120, 1020, 1191, 1382, 1512, 1835, 2030
SatI GCNGC 5 cut(s) 38, 1236, 1466, 1785, 1913
Sau3AI GATC 5 cut(s) 208, 705, 730, 807, 2089
Sau96I GGNCC 6 cut(s) 168, 518, 870, 954, 1058, 1087
SchI GAGTC 2 cut(s) 305, 894
ScrFI CCNGG 3 cut(s) 356, 967, 1012
SduI GDGCHC 2 cut(s) 455, 1758
SfaAI GCGATCGC 1 cut(s) 2092
SfaNI GCATC 3 cut(s) 142, 552, 1276
SfoI GGCGCC 1 cut(s) 360
SgfI GCGATCGC 1 cut(s) 2092
SgrDI CGTCGACG 1 cut(s) 194
SinI GGWCC 3 cut(s) 168, 870, 954
SmiMI CAYNNNNRTG 1 cut(s) 1607
SmlI CTYRAG 2 cut(s) 289, 2104
SmoI CTYRAG 2 cut(s) 289, 2104
SsiI CCGC 8 cut(s) 22, 129, 175, 253, 473, 539, 896, 1803
SspDI GGCGCC 1 cut(s) 358
SspMI CTAG 6 cut(s) 267, 893, 1062, 1587, 1635, 2129
SstI GAGCTC 1 cut(s) 1758
StyD4I CCNGG 3 cut(s) 354, 965, 1010
StyI CCWWGG 6 cut(s) 581, 927, 1061, 1444, 1555, 1593
TaaI ACNGT 3 cut(s) 69, 193, 335
TaiI ACGT 2 cut(s) 201, 566
TaqI TCGA 8 cut(s) 195, 477, 509, 546, 860, 1709, 1779, 1862
TatI WGTACW 1 cut(s) 1108
TfiI GAWTC 8 cut(s) 506, 673, 1030, 1273, 1352, 1502, 1643, 1706
Tru1I TTAA 7 cut(s) 120, 1020, 1191, 1382, 1512, 1835, 2030
Tru9I TTAA 7 cut(s) 120, 1020, 1191, 1382, 1512, 1835, 2030
TscAI CASTG 2 cut(s) 460, 661
TseI GCWGC 5 cut(s) 37, 1235, 1465, 1784, 1912
TspDTI ATGAA 7 cut(s) 1095, 1150, 1187, 1321, 1731, 1927, 2029
TspGWI ACGGA 1 cut(s) 304
TspRI CASTG 2 cut(s) 460, 661
Tth111I GACNNNGTC 1 cut(s) 695
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 3 cut(s) 168, 870, 954
XapI RAATTY 3 cut(s) 820, 1040, 1328
XcmI CCANNNNNNNNNTGG 3 cut(s) 139, 1345, 1600
XmaJI CCTAGG 1 cut(s) 1061
XmiI GTMKAC 3 cut(s) 195, 1323, 1551
XspI CTAG 6 cut(s) 267, 893, 1062, 1587, 1635, 2129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.