RchiOBHm_Chr5g0040731

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
35365163 .. 35367633
2471 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31921

Sequence Viewer

Length: 2034 bp
ATGGTTGTCATCAACAATTGTGGGAATCGGATCATGACACACCTTCATGAGTACTCACTAAAACAGCTTCAATTCCTTCTTCTTCTCTTCTTTCTGCTAACCCCTTCTGCAACCTCATTAACCTTCAATCTCTCGAGCTTTTCCGGTGCATACTCTATAATAAAAACCGAGGCAGATGCCACCATCGACAGGCAAGTCCTCCGACTCACCACTAATGTTGTAGATGAACCACGGCAGCAAAGAGTCGGCCGAGCCACCTGCCAAGAACCCTTCCTCCTCCGCGAAATTGCCACCGGAAAGCTCGCTGATTTTACTACACATTTCACCTTTGTCATCGATTCTCTAGGGGCACCCGACTATGCACAAGGGCTAGTGTTCTTCATAGCGCCAGCCGGATCCCTTTTCAACACATCCTTCGGAGGAGATGGTGCCCTCGGCCTCCCTGTGGCAAGGACGTCAGGAAAAATTGGGTACAACTTTGTGGCGGTGGAGTTTGATATCTCCCAGAATAATCAAACATTCATCAAGGATCCCACCGGCAACCATGTGGGTATCGACGTCAACTCTCTCAAGTCCTTGAACACCAAGCCTTGGAATGGTAATATTACATATGGACAACACAATAGTGCTACGGTTAGTTACAATTCTAGCACAAAAAATCTTAGCGTTGCCTTCACTACTTTTGTTAATGGTACCCAACAGATGGACTATCTTTCTCACCGTGTTGATCTGATAGAGCACTTGCCCGACTTGGTCATTGTCGGGTTCTCTGCTGCAACGAGGGATAAGTTTGTTGTGCACAAGATCCTCTCGTGGAATTTTACTTCTACTGACCTGGCTATCCCAGGAAATGCCCATGGTGTGAGTATAGCACTAGTCGTTGGGTTGAGTATTGGTGGATTCAGTATCTTGGTTGGTGGGTTGACATTGGTTTGGTTCATCTTTTGGAAGAAGAGGGAAGGAGGGGAAAGTGATGATGAAGATCCCACGGTACTTGATGACGAATTTGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAGCGAGTTGGCTCGAGCAACAAATAATTTTGTAGAGGGAGAGAAGCTTGGAGAGGGAGGTTTTGGTGGGGTTTATAGAGGCTTCATAAAAGACTTGAACTCATATGTTGCTGTTAAGAGGGTATCCAAGGGGTCTAACCAAGGACTAAAGGAGTATGTATCGGAAGTAAGGATCATCAGTCGGCTTAGGCATCGAAATCTGGTGCAACTAATTGGTTGGTGCCATGAAAAAGGTGAGCTCCTACTTGTCTATGAGTACATGCCCAACGGTAGTTTAGATTCCCATCTATTCAAATTAAAAAGCTTGTTAAGTTGGAGGGTAAGATACAAGATTGCTCAAGGGTTGGCCTCTGGCTTATTTTACCTACACGAAGAATGGGAACAATGTGTTTTGCACAGGGATATCAAATCCAGCAACATTATGTTGGATTCAAACTTCAATGTGAAACTTGGGGATTTCGGGCTAGCTCGACTTGTGGACCATGGAAAACAGTGGGAAACAACAACTGTAGCTGGAACCAGAGGCTACATGGCTCTGGAATATGTTACCACAGGAAAGGCTAGCAAGGAATCGGATGTTTACAGCTTCGGAGTTGTTGCTTTGGAAATAGCCTGCGGAAGGAAACCTATTGATCTTACGTTGATAAGTAATCAAATAATTATGGTGCAGTGGGTTTGGGAGCTTTATGGAGAAGGGAAAGTCATTGAAGCTGCCGATCCTGTACTTTCAGGAGATTTTGATGAGAAACAAATGGAGTGCTTGATGATCGTTGGGTTATGGTGTGCTCATCCGAATTACAGTATGAGGCCTTCAATACAACAAGCAATTCAGGTGCTTAACTTCGAAGTTCCATTGCCTAGTCTACCACCACATATGCCGATGACCACCTTTGCTCCTCCAATATCATTATCCACGTTGTCTGGTTATACCACCAGCTCTGTAGGAGGGCAAACTGAGTCTTCAGGCAATGGCTATACCACCAATTCCTCATAG

Protein Analysis

677

Amino Acids

74.74

Weight (kDa)

6.04

Isoelectric Point (pI)

23.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 40 - 279 1.7e-54 Legume lectin domain
Pkinase PF00069 358 - 624 1.1e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 360 - 558 2.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 266
AasI GACNNNNNNGTC 1 cut(s) 194
AatII GACGTC 2 cut(s) 458, 561
Acc36I ACCTGC 1 cut(s) 266
Acc65I GGTACC 1 cut(s) 692
AccB1I GGYRCC 4 cut(s) 349, 428, 692, 1260
AccB7I CCANNNNNTGG 2 cut(s) 591, 703
AccI GTMKAC 1 cut(s) 1903
AccII CGCG 1 cut(s) 282
AciI CCGC 3 cut(s) 280, 485, 1656
AclWI GGATC 9 cut(s) 38, 390, 403, 524, 537, 799, 977, 1220, 1751
AcoI YGGCCR 1 cut(s) 247
AcsI RAATTY 2 cut(s) 817, 1004
AcuI CTGAAG 1 cut(s) 1986
AcyI GRCGYC 2 cut(s) 455, 558
AfaI GTAC 7 cut(s) 53, 473, 694, 993, 1040, 1298, 1764
AfiI CCNNNNNNNGG 6 cut(s) 189, 445, 591, 596, 703, 1659
AhlI ACTAGT 1 cut(s) 874
AjnI CCWGG 2 cut(s) 834, 844
AleI CACNNNNGTG 1 cut(s) 624
AloI GAACNNNNNNTCC 2 cut(s) 258, 290
Alw21I GWGCWC 4 cut(s) 741, 801, 1281, 1828
Alw44I GTGCAC 1 cut(s) 797
AlwI GGATC 9 cut(s) 38, 390, 403, 524, 537, 799, 977, 1220, 1751
Ama87I CYCGRG 2 cut(s) 133, 1053
AoxI GGCC 5 cut(s) 247, 436, 1021, 1386, 1847
ApaLI GTGCAC 1 cut(s) 797
ApeKI GCWGC 3 cut(s) 235, 773, 1751
ApoI RAATTY 2 cut(s) 817, 1004
Asp718I GGTACC 1 cut(s) 692
AspA2I CCTAGG 1 cut(s) 1025
AspLEI GCGC 1 cut(s) 388
AspS9I GGNCC 2 cut(s) 1022, 1519
AsuHPI GGTGA 4 cut(s) 199, 316, 710, 1286
AsuII TTCGAA 1 cut(s) 1884
AsuNHI GCTAGC 2 cut(s) 1504, 1601
AvaI CYCGRG 2 cut(s) 133, 1053
AvaII GGWCC 1 cut(s) 1519
AvrII CCTAGG 1 cut(s) 1025
BaeGI GKGCMC 3 cut(s) 352, 433, 801
BamHI GGATCC 2 cut(s) 395, 529
BanI GGYRCC 4 cut(s) 349, 428, 692, 1260
BanII GRGCYC 1 cut(s) 1281
BarI GAAGNNNNNNTAC 4 cut(s) 1022, 1054, 1834, 1866
BauI CACGAG 1 cut(s) 811
BbsI GAAGAC 1 cut(s) 1992
Bbv12I GWGCWC 4 cut(s) 741, 801, 1281, 1828
BbvI GCAGC 3 cut(s) 247, 760, 1738
BccI CCATC 4 cut(s) 191, 419, 697, 1332
BceAI ACGGC 1 cut(s) 248
BcgI CGANNNNNNTGC 4 cut(s) 158, 192, 240, 274
BciT130I CCWGG 2 cut(s) 836, 846
BciVI GTATCC 1 cut(s) 1174
BcuI ACTAGT 1 cut(s) 874
BfaI CTAG 8 cut(s) 344, 371, 648, 875, 1026, 1505, 1602, 1899
BfmI CTRYAG 2 cut(s) 1548, 1980
BfoI RGCGCY 1 cut(s) 389
BfuAI ACCTGC 1 cut(s) 266
BfuI GTATCC 1 cut(s) 1174
BisI GCNGC 3 cut(s) 236, 774, 1752
BlnI CCTAGG 1 cut(s) 1025
BlsI GCNGC 3 cut(s) 237, 775, 1753
BmcAI AGTACT 1 cut(s) 53
Bme1390I CCNGG 2 cut(s) 836, 846
Bme18I GGWCC 1 cut(s) 1519
BmeT110I CYCGRG 2 cut(s) 133, 1053
BmgT120I GGNCC 2 cut(s) 1022, 1519
BmiI GGNNCC 7 cut(s) 351, 397, 430, 531, 694, 1262, 1558
BmrFI CCNGG 2 cut(s) 836, 846
BmsI GCATC 2 cut(s) 166, 1240
BmtI GCTAGC 2 cut(s) 1508, 1605
BpiI GAAGAC 1 cut(s) 1992
Bpu10I CCTNAGC 1 cut(s) 1226
Bpu14I TTCGAA 1 cut(s) 1884
BpuEI CTTGAG 2 cut(s) 554, 1362
Bsa29I ATCGAT 1 cut(s) 336
BsaBI GATNNNNATC 2 cut(s) 981, 1323
BsaHI GRCGYC 2 cut(s) 455, 558
BsaWI WCCGGW 2 cut(s) 143, 293
BsaXI ACNNNNNCTCC 4 cut(s) 258, 288, 1918, 1948
Bsc4I CCNNNNNNNGG 6 cut(s) 189, 445, 591, 596, 703, 1659
Bse118I RCCGGY 1 cut(s) 536
Bse3DI GCAATG 2 cut(s) 1892, 2014
Bse8I GATNNNNATC 2 cut(s) 981, 1323
BseBI CCWGG 2 cut(s) 836, 846
BseCI ATCGAT 1 cut(s) 336
BseGI GGATG 3 cut(s) 410, 1621, 1828
BseJI GATNNNNATC 2 cut(s) 981, 1323
BseLI CCNNNNNNNGG 6 cut(s) 189, 445, 591, 596, 703, 1659
BseMI GCAATG 2 cut(s) 1892, 2014
BseMII CTCAG 1 cut(s) 1986
BseRI GAGGAG 3 cut(s) 266, 435, 1926
BseSI GKGCMC 3 cut(s) 352, 433, 801
BseX3I CGGCCG 1 cut(s) 247
BseXI GCAGC 3 cut(s) 247, 760, 1738
BsgI GTGCAG 1 cut(s) 1727
Bsh1236I CGCG 1 cut(s) 282
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 5 cut(s) 249, 438, 1023, 1388, 1849
BshNI GGYRCC 4 cut(s) 349, 428, 692, 1260
BshVI ATCGAT 1 cut(s) 336
BsiEI CGRYCG 1 cut(s) 250
BsiHKAI GWGCWC 4 cut(s) 741, 801, 1281, 1828
BsiHKCI CYCGRG 2 cut(s) 133, 1053
BsiSI CCGG 4 cut(s) 144, 294, 393, 537
BslFI GGGAC 1 cut(s) 1030
BslI CCNNNNNNNGG 6 cut(s) 189, 445, 591, 596, 703, 1659
BsmFI GGGAC 1 cut(s) 1030
BsnI GGCC 5 cut(s) 249, 438, 1023, 1388, 1849
BsoBI CYCGRG 2 cut(s) 133, 1053
Bsp119I TTCGAA 1 cut(s) 1884
Bsp1286I GDGCHC 6 cut(s) 352, 433, 741, 801, 1281, 1828
Bsp19I CCATGG 2 cut(s) 856, 1522
BspACI CCGC 3 cut(s) 280, 485, 1656
BspANI GGCC 5 cut(s) 249, 438, 1023, 1388, 1849
BspCNI CTCAG 1 cut(s) 1987
BspDI ATCGAT 1 cut(s) 336
BspFNI CGCG 1 cut(s) 282
BspHI TCATGA 2 cut(s) 33, 46
BspLI GGNNCC 7 cut(s) 351, 397, 430, 531, 694, 1262, 1558
BspMI ACCTGC 1 cut(s) 266
BspOI GCTAGC 2 cut(s) 1508, 1605
BspPI GGATC 9 cut(s) 38, 390, 403, 524, 537, 799, 977, 1220, 1751
BspT104I TTCGAA 1 cut(s) 1884
BspT107I GGYRCC 4 cut(s) 349, 428, 692, 1260
BsrDI GCAATG 2 cut(s) 1892, 2014
BsrFI RCCGGY 1 cut(s) 536
BssAI RCCGGY 1 cut(s) 536
BssNI GRCGYC 2 cut(s) 455, 558
BssSI CACGAG 1 cut(s) 811
BssT1I CCWWGG 6 cut(s) 590, 856, 1025, 1167, 1180, 1522
Bst2BI CACGAG 1 cut(s) 811
Bst2UI CCWGG 2 cut(s) 836, 846
Bst4CI ACNGT 7 cut(s) 634, 722, 991, 1310, 1533, 1549, 1841
Bst6I CTCTTC 2 cut(s) 92, 947
BstACI GRCGYC 2 cut(s) 455, 558
BstBI TTCGAA 1 cut(s) 1884
BstC8I GCNNGC 5 cut(s) 303, 390, 1506, 1603, 1654
BstDEI CTNAG 3 cut(s) 662, 1226, 1995
BstDSI CCRYGG 4 cut(s) 230, 856, 987, 1522
BstENI CCTNNNNNAGG 1 cut(s) 1657
BstF5I GGATG 3 cut(s) 410, 1621, 1828
BstFNI CGCG 1 cut(s) 282
BstH2I RGCGCY 1 cut(s) 389
BstHHI GCGC 1 cut(s) 388
BstMCI CGRYCG 1 cut(s) 250
BstNI CCWGG 2 cut(s) 836, 846
BstNSI RCATGY 1 cut(s) 1303
BstSCI CCNGG 2 cut(s) 834, 844
BstSFI CTRYAG 2 cut(s) 1548, 1980
BstSLI GKGCMC 3 cut(s) 352, 433, 801
BstUI CGCG 1 cut(s) 282
BstV1I GCAGC 3 cut(s) 247, 760, 1738
BstV2I GAAGAC 1 cut(s) 1992
BstX2I RGATCY 4 cut(s) 395, 529, 804, 982
BstYI RGATCY 4 cut(s) 395, 529, 804, 982
BstZI CGGCCG 1 cut(s) 247
Bsu15I ATCGAT 1 cut(s) 336
BsuI GTATCC 1 cut(s) 1174
BsuRI GGCC 5 cut(s) 249, 438, 1023, 1388, 1849
BsuTUI ATCGAT 1 cut(s) 336
BtgI CCRYGG 4 cut(s) 230, 856, 987, 1522
BtsCI GGATG 3 cut(s) 410, 1621, 1828
BtsI GCAGTG 1 cut(s) 1715
BtsIMutI CAGTG 2 cut(s) 1538, 1715
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 5 cut(s) 303, 390, 1506, 1603, 1654
CciI TCATGA 2 cut(s) 33, 46
CfoI GCGC 1 cut(s) 388
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 2 cut(s) 1022, 1519
ClaI ATCGAT 1 cut(s) 336
Csp6I GTAC 7 cut(s) 52, 472, 693, 992, 1039, 1297, 1763
CspCI CAANNNNNGTGG 5 cut(s) 36, 199, 234, 976, 1011
CviAII CATG 8 cut(s) 34, 47, 545, 857, 1265, 1300, 1523, 1570
CviQI GTAC 7 cut(s) 52, 472, 693, 992, 1039, 1297, 1763
DdeI CTNAG 3 cut(s) 662, 1226, 1995
DrdI GACNNNNNNGTC 1 cut(s) 194
DseDI GACNNNNNNGTC 1 cut(s) 194
EaeI YGGCCR 1 cut(s) 247
EagI CGGCCG 1 cut(s) 247
Eam1104I CTCTTC 2 cut(s) 92, 947
EarI CTCTTC 2 cut(s) 92, 947
Ecl136II GAGCTC 1 cut(s) 1279
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 6 cut(s) 590, 856, 1025, 1167, 1180, 1522
Eco147I AGGCCT 1 cut(s) 1849
Eco24I GRGCYC 1 cut(s) 1281
Eco32I GATATC 2 cut(s) 499, 1444
Eco47I GGWCC 1 cut(s) 1519
Eco52I CGGCCG 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 1279
Eco57I CTGAAG 1 cut(s) 1986
Eco88I CYCGRG 2 cut(s) 133, 1053
EcoICRI GAGCTC 1 cut(s) 1279
EcoNI CCTNNNNNAGG 1 cut(s) 1657
EcoO109I RGGNCCY 1 cut(s) 1022
EcoRII CCWGG 2 cut(s) 834, 844
EcoRV GATATC 2 cut(s) 499, 1444
EcoT14I CCWWGG 6 cut(s) 590, 856, 1025, 1167, 1180, 1522
EcoT38I GRGCYC 1 cut(s) 1281
ErhI CCWWGG 6 cut(s) 590, 856, 1025, 1167, 1180, 1522
FaeI CATG 8 cut(s) 37, 50, 548, 860, 1268, 1303, 1526, 1573
FaqI GGGAC 1 cut(s) 1030
FatI CATG 8 cut(s) 33, 46, 544, 856, 1264, 1299, 1522, 1569
FauNDI CATATG 3 cut(s) 610, 1144, 1914
FblI GTMKAC 1 cut(s) 1903
Fnu4HI GCNGC 3 cut(s) 236, 774, 1752
FokI GGATG 3 cut(s) 397, 1628, 1815
FriOI GRGCYC 1 cut(s) 1281
Fsp4HI GCNGC 3 cut(s) 236, 774, 1752
FspBI CTAG 8 cut(s) 344, 371, 648, 875, 1026, 1505, 1602, 1899
GlaI GCGC 1 cut(s) 387
GluI GCNGC 3 cut(s) 236, 774, 1752
HaeII RGCGCY 1 cut(s) 389
HaeIII GGCC 5 cut(s) 249, 438, 1023, 1388, 1849
HapII CCGG 4 cut(s) 144, 294, 393, 537
HhaI GCGC 1 cut(s) 388
Hin1I GRCGYC 2 cut(s) 455, 558
Hin1II CATG 8 cut(s) 37, 50, 548, 860, 1268, 1303, 1526, 1573
Hin6I GCGC 1 cut(s) 386
HinP1I GCGC 1 cut(s) 386
HincII GTYRAC 2 cut(s) 562, 924
HindII GTYRAC 2 cut(s) 562, 924
HindIII AAGCTT 2 cut(s) 1085, 1342
HinfI GANTC 9 cut(s) 25, 204, 243, 338, 900, 1319, 1469, 1610, 1997
HpaII CCGG 4 cut(s) 144, 294, 393, 537
HphI GGTGA 4 cut(s) 199, 316, 710, 1286
Hpy166II GTNNAC 6 cut(s) 562, 799, 924, 1519, 1621, 1904
Hpy188I TCNGA 8 cut(s) 30, 203, 419, 732, 1204, 1615, 1631, 1833
Hpy188III TCNNGA 6 cut(s) 34, 47, 133, 459, 1577, 1770
Hpy8I GTNNAC 6 cut(s) 562, 799, 924, 1519, 1621, 1904
Hpy99I CGWCG 1 cut(s) 560
HpyCH4III ACNGT 7 cut(s) 634, 722, 991, 1310, 1533, 1549, 1841
HpyCH4IV ACGT 4 cut(s) 455, 558, 1679, 1955
HpyCH4V TGCA 8 cut(s) 110, 149, 362, 776, 799, 1246, 1435, 1708
HpyF3I CTNAG 3 cut(s) 662, 1226, 1995
HpySE526I ACGT 4 cut(s) 455, 558, 1679, 1955
Hsp92I GRCGYC 2 cut(s) 455, 558
Hsp92II CATG 8 cut(s) 37, 50, 548, 860, 1268, 1303, 1526, 1573
HspAI GCGC 1 cut(s) 386
KpnI GGTACC 1 cut(s) 696
LmnI GCTCC 3 cut(s) 1284, 1720, 1939
Lsp1109I GCAGC 3 cut(s) 247, 760, 1738
LweI GCATC 2 cut(s) 166, 1240
MaeI CTAG 8 cut(s) 344, 371, 648, 875, 1026, 1505, 1602, 1899
MaeII ACGT 4 cut(s) 455, 558, 1679, 1955
MaeIII GTNAC 2 cut(s) 638, 1585
MboII GAAGA 9 cut(s) 71, 74, 79, 370, 961, 964, 992, 1424, 1992
MfeI CAATTG 1 cut(s) 16
MflI RGATCY 4 cut(s) 395, 529, 804, 982
MhlI GDGCHC 6 cut(s) 352, 433, 741, 801, 1281, 1828
MlyI GAGTC 3 cut(s) 198, 252, 2006
MmeI TCCRAC 3 cut(s) 226, 1334, 1446
MseI TTAA 6 cut(s) 119, 687, 1155, 1337, 1349, 1878
MslI CAYNNNNRTG 2 cut(s) 45, 624
MspI CCGG 4 cut(s) 144, 294, 393, 537
MspR9I CCNGG 2 cut(s) 836, 846
MunI CAATTG 1 cut(s) 16
MvaI CCWGG 2 cut(s) 836, 846
MvnI CGCG 1 cut(s) 282
NcoI CCATGG 2 cut(s) 856, 1522
NdeI CATATG 3 cut(s) 610, 1144, 1914
NheI GCTAGC 2 cut(s) 1504, 1601
NlaIII CATG 8 cut(s) 37, 50, 548, 860, 1268, 1303, 1526, 1573
NlaIV GGNNCC 7 cut(s) 351, 397, 430, 531, 694, 1262, 1558
NmeAIII GCCGAG 2 cut(s) 275, 414
NspI RCATGY 1 cut(s) 1303
NspV TTCGAA 1 cut(s) 1884
OliI CACNNNNGTG 1 cut(s) 624
PaeR7I CTCGAG 2 cut(s) 133, 1053
PagI TCATGA 2 cut(s) 33, 46
PaqCI CACCTGC 1 cut(s) 266
PceI AGGCCT 1 cut(s) 1849
PfeI GAWTC 6 cut(s) 25, 338, 900, 1319, 1469, 1610
PflFI GACNNNGTC 1 cut(s) 752
PflMI CCANNNNNTGG 2 cut(s) 591, 703
PkrI GCNGC 3 cut(s) 237, 775, 1753
PleI GAGTC 3 cut(s) 198, 251, 2005
PpsI GAGTC 3 cut(s) 198, 251, 2005
Psp124BI GAGCTC 1 cut(s) 1281
Psp6I CCWGG 2 cut(s) 834, 844
PspGI CCWGG 2 cut(s) 834, 844
PspN4I GGNNCC 7 cut(s) 351, 397, 430, 531, 694, 1262, 1558
PspPI GGNCC 2 cut(s) 1022, 1519
PspXI VCTCGAGB 1 cut(s) 1053
PsuI RGATCY 4 cut(s) 395, 529, 804, 982
PsyI GACNNNGTC 1 cut(s) 752
RsaI GTAC 7 cut(s) 53, 473, 694, 993, 1040, 1298, 1764
RsaNI GTAC 7 cut(s) 52, 472, 693, 992, 1039, 1297, 1763
RseI CAYNNNNRTG 2 cut(s) 45, 624
SacI GAGCTC 1 cut(s) 1281
SaqAI TTAA 6 cut(s) 119, 687, 1155, 1337, 1349, 1878
SatI GCNGC 3 cut(s) 236, 774, 1752
Sau96I GGNCC 2 cut(s) 1022, 1519
ScaI AGTACT 1 cut(s) 53
SchI GAGTC 3 cut(s) 198, 252, 2006
ScrFI CCNGG 2 cut(s) 836, 846
SduI GDGCHC 6 cut(s) 352, 433, 741, 801, 1281, 1828
SfaNI GCATC 2 cut(s) 166, 1240
SfcI CTRYAG 2 cut(s) 1548, 1980
Sfr274I CTCGAG 2 cut(s) 133, 1053
SfuI TTCGAA 1 cut(s) 1884
SinI GGWCC 1 cut(s) 1519
SlaI CTCGAG 2 cut(s) 133, 1053
SmiMI CAYNNNNRTG 2 cut(s) 45, 624
SmlI CTYRAG 4 cut(s) 133, 569, 1053, 1377
SmoI CTYRAG 4 cut(s) 133, 569, 1053, 1377
SpeI ACTAGT 1 cut(s) 874
SseBI AGGCCT 1 cut(s) 1849
SsiI CCGC 3 cut(s) 280, 485, 1656
SspI AATATT 1 cut(s) 604
SspMI CTAG 8 cut(s) 344, 371, 648, 875, 1026, 1505, 1602, 1899
SstI GAGCTC 1 cut(s) 1281
StuI AGGCCT 1 cut(s) 1849
StyD4I CCNGG 2 cut(s) 834, 844
StyI CCWWGG 6 cut(s) 590, 856, 1025, 1167, 1180, 1522
TaaI ACNGT 7 cut(s) 634, 722, 991, 1310, 1533, 1549, 1841
TaiI ACGT 4 cut(s) 458, 561, 1682, 1958
TaqI TCGA 8 cut(s) 134, 186, 336, 555, 1054, 1234, 1510, 1884
TatI WGTACW 3 cut(s) 51, 1296, 1762
TfiI GAWTC 6 cut(s) 25, 338, 900, 1319, 1469, 1610
Tru1I TTAA 6 cut(s) 119, 687, 1155, 1337, 1349, 1878
Tru9I TTAA 6 cut(s) 119, 687, 1155, 1337, 1349, 1878
TscAI CASTG 2 cut(s) 1538, 1715
TseI GCWGC 3 cut(s) 235, 773, 1751
TspDTI ATGAA 8 cut(s) 35, 240, 370, 511, 928, 993, 1114, 1281
TspRI CASTG 2 cut(s) 1538, 1715
Tth111I GACNNNGTC 1 cut(s) 752
Van91I CCANNNNNTGG 2 cut(s) 591, 703
VneI GTGCAC 1 cut(s) 797
VpaK11BI GGWCC 1 cut(s) 1519
XagI CCTNNNNNAGG 1 cut(s) 1657
XapI RAATTY 2 cut(s) 817, 1004
XceI RCATGY 1 cut(s) 1303
XcmI CCANNNNNNNNNTGG 1 cut(s) 1567
XhoI CTCGAG 2 cut(s) 133, 1053
XmaJI CCTAGG 1 cut(s) 1025
XmiI GTMKAC 1 cut(s) 1903
XspI CTAG 8 cut(s) 344, 371, 648, 875, 1026, 1505, 1602, 1899
ZraI GACGTC 2 cut(s) 456, 559
ZrmI AGTACT 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.