Rorug05G0132400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
11793649 .. 11795914
2266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0132400.1

Sequence Viewer

Length: 1605 bp
ATGGCTTCCATTTCTGCAACTTTCGTCATCCTACTATTCACGATTTCATTCTCAGTTTCTGCAACTCTATCTGCATCAGTTATAGATGACCTTAAACGTTTAAAACCACCTCAAGATTTCAACTCCACAATCATGAAAAACTGTCTTCAGAACCCATCTCTCAGATACTGCAGTACTTCTTCTCCAATGGACCTTGATGAGATTTTCAAATCCACCATTGTTGCAAGCCATCTCTGCAACGAGTCCAAGAACTCGAACTGCATCGAGTCATTCCCTAAAGTAGATCTTCGAAGCCGCCCAAACATTGCACCACTCTACTTGTCATTCACCTTCTTTTGGAAGTATTGCCCTTTAAGCATCTTATCTATTGACCTGTCCAATGCCTCTTTGAAGAGCAATTTTCCCATTGATGTCCTTCACTGCACCCAAATCCAATCTCTTGATATGAGCCATAATGAACTGTATGGTGATGTGCCAATAGAGAACTTCTCTGCCCTCACAAATCTCACAGTTCTGAATCTGTCATATAATCACTTCTCAGAGAGTAAAATCTCTGATACGTTGTTCTTCAAAAAGTTTAACTCTTCCAGTTTTCTTCATTCGGGTCTCATTCCAGATCACCAAAAGTTCAGAATCAAGGCTATCGTCTTGTTGATTGGTTTTCCTATCTTTGTGATTCTGAAGGTGTGTTGCTTGTGGTGGCTCTGTTTTCGCAGGCCTGATTTCCTCCCAAGAATGTTTCGAAGAAAGCACAGGTTTACACCAGCAATACTCAAGGCAGCAACCAACGGATTTTCAAGACACAATTTGATGGGGAAGAGCGCATCAGTTGATATTTACAAAGGAACTCTGAGAGATGGTACTGATGTCAGGATTGAGGTTTACAGTAGCGAAAGCCACCCGCAAGTGATTGAAGAATGCAAGGTTCTTGTTCAGCTATGCCATAAGAACCTGGCTAATTTACTCGGTTGGTGTGATAACCGAAAGTTGAGGGCCATTGTTACTGAATGGATGGAAGGAGAGAACCTAGAGAGCTGGCTTTTGGGATCAAGTTTTACACCATGGAACTACAGGTTGAGAATATTGATGGGGATTGTGGAAGGCATGTGTTATCTACAGGAGCAGTGGCCTGAAGTTGGGTATGATCTGAGGACAAGTAGTATCATGTTGTGTAACTACAGTCTGGACCCAAAGATTTCAAGGTTTAAAGTTGGAAATCAAAGCAGTAGCAGTAGAAGGATGTACAAGTTTGGAGTATTCCTGCTAGAAATGATGGTAAACAGGAGGCCACAAGAAGAGTTTGAGAGGGGCGAGGCTGGTTTTATAGAGTATATCAGAATGCATTATCCTGGAAACTTAGAGCAACTAATAGACCCGAAAATGGAATTGACTCAAAACACTGTCGACCAAGCTAAACAGGCAATATCCCTGGGGCTAATGTGCACAGAAGTATCTAGCAACCGGCAACCAAGCTTAGAACAGGTGTTTGATATTGTGAGTAGAGCCTACCAGTCATGCAGAGTTTTAGCATCTCATCATAATCATTATCACAGAAGATTTCATGCAGAAAGAGGAAAAGGACACAGGCGTGTGCAATCAAGATGA

Protein Analysis

534

Amino Acids

61.51

Weight (kDa)

8.95

Isoelectric Point (pI)

54.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 269 - 400 4.9e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 413 1e-06 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1404
AciI CCGC 2 cut(s) 295, 902
AclI AACGTT 1 cut(s) 97
AclWI GGATC 1 cut(s) 1054
AcuI CTGAAG 3 cut(s) 131, 701, 1152
AfaI GTAC 3 cut(s) 175, 862, 1244
AfiI CCNNNNNNNGG 3 cut(s) 336, 1136, 1381
AgsI TTSAA 7 cut(s) 121, 208, 391, 571, 798, 914, 1200
AjnI CCWGG 3 cut(s) 951, 1348, 1428
AleI CACNNNNGTG 1 cut(s) 1587
AluBI AGCT 4 cut(s) 937, 1035, 1412, 1473
AluI AGCT 4 cut(s) 937, 1035, 1412, 1473
Alw21I GWGCWC 1 cut(s) 1445
Alw26I GTCTC 1 cut(s) 611
Alw44I GTGCAC 1 cut(s) 1441
AlwI GGATC 1 cut(s) 1054
AlwNI CAGNNNCTG 2 cut(s) 59, 168
AoxI GGCC 4 cut(s) 716, 993, 1127, 1286
ApaLI GTGCAC 1 cut(s) 1441
ApeKI GCWGC 1 cut(s) 779
AspLEI GCGC 1 cut(s) 824
AspS9I GGNCC 3 cut(s) 190, 993, 1186
AsuHPI GGTGA 3 cut(s) 319, 479, 611
AsuII TTCGAA 2 cut(s) 289, 742
AvaII GGWCC 2 cut(s) 190, 1186
BaeGI GKGCMC 1 cut(s) 1445
BaeI ACNNNNGTAYC 6 cut(s) 157, 190, 852, 885, 1434, 1467
BbsI GAAGAC 1 cut(s) 137
Bbv12I GWGCWC 1 cut(s) 1445
BbvI GCAGC 1 cut(s) 791
BccI CCATC 7 cut(s) 163, 237, 805, 851, 1006, 1081, 1267
BciT130I CCWGG 3 cut(s) 953, 1350, 1430
BcoDI GTCTC 1 cut(s) 611
BfaI CTAG 3 cut(s) 1028, 1265, 1455
BfmI CTRYAG 4 cut(s) 169, 1069, 1115, 1177
BglII AGATCT 1 cut(s) 283
BisI GCNGC 2 cut(s) 295, 780
BlsI GCNGC 2 cut(s) 296, 781
BmcAI AGTACT 1 cut(s) 175
Bme1390I CCNGG 3 cut(s) 953, 1350, 1430
Bme18I GGWCC 2 cut(s) 190, 1186
BmgT120I GGNCC 3 cut(s) 190, 993, 1186
BmiI GGNNCC 1 cut(s) 1188
BmrFI CCNGG 3 cut(s) 953, 1350, 1430
BmsI GCATC 5 cut(s) 83, 270, 366, 833, 1538
BpiI GAAGAC 1 cut(s) 137
BplI GAGNNNNNCTC 2 cut(s) 473, 505
Bpu14I TTCGAA 2 cut(s) 289, 742
BpuEI CTTGAG 2 cut(s) 96, 758
BsaI GGTCTC 1 cut(s) 611
BsaJI CCNNGG 3 cut(s) 1061, 1428, 1429
BsaXI ACNNNNNCTCC 2 cut(s) 166, 196
Bsc4I CCNNNNNNNGG 3 cut(s) 336, 1136, 1381
Bse118I RCCGGY 1 cut(s) 1461
Bse1I ACTGG 2 cut(s) 588, 1510
Bse3DI GCAATG 1 cut(s) 303
BseBI CCWGG 3 cut(s) 953, 1350, 1430
BseDI CCNNGG 3 cut(s) 1061, 1428, 1429
BseGI GGATG 3 cut(s) 27, 1017, 1245
BseLI CCNNNNNNNGG 3 cut(s) 336, 1136, 1381
BseMI GCAATG 1 cut(s) 303
BseMII CTCAG 5 cut(s) 66, 175, 552, 842, 1139
BseNI ACTGG 2 cut(s) 588, 1510
BseSI GKGCMC 1 cut(s) 1445
BseXI GCAGC 1 cut(s) 791
BsgI GTGCAG 1 cut(s) 406
BshFI GGCC 4 cut(s) 718, 995, 1129, 1288
BsiHKAI GWGCWC 1 cut(s) 1445
BsiSI CCGG 1 cut(s) 1462
BslI CCNNNNNNNGG 3 cut(s) 336, 1136, 1381
BsmAI GTCTC 1 cut(s) 611
BsmI GAATGC 2 cut(s) 923, 1344
BsnI GGCC 4 cut(s) 718, 995, 1129, 1288
Bso31I GGTCTC 1 cut(s) 611
Bsp119I TTCGAA 2 cut(s) 289, 742
Bsp1286I GDGCHC 1 cut(s) 1445
Bsp1407I TGTACA 1 cut(s) 1242
Bsp143I GATC 4 cut(s) 283, 616, 1046, 1144
Bsp19I CCATGG 1 cut(s) 1061
BspACI CCGC 2 cut(s) 295, 902
BspANI GGCC 4 cut(s) 718, 995, 1129, 1288
BspCNI CTCAG 5 cut(s) 65, 174, 551, 843, 1140
BspHI TCATGA 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 1188
BspMAI CTGCAG 1 cut(s) 173
BspPI GGATC 1 cut(s) 1054
BspQI GCTCTTC 2 cut(s) 386, 812
BspT104I TTCGAA 2 cut(s) 289, 742
BspTNI GGTCTC 1 cut(s) 611
BsrDI GCAATG 1 cut(s) 303
BsrFI RCCGGY 1 cut(s) 1461
BsrGI TGTACA 1 cut(s) 1242
BsrI ACTGG 2 cut(s) 588, 1510
BssAI RCCGGY 1 cut(s) 1461
BssECI CCNNGG 3 cut(s) 1061, 1428, 1429
BssMI GATC 4 cut(s) 283, 616, 1046, 1144
BssT1I CCWWGG 1 cut(s) 1061
Bst2UI CCWGG 3 cut(s) 953, 1350, 1430
Bst4CI ACNGT 6 cut(s) 143, 462, 511, 887, 1181, 1402
Bst6I CTCTTC 4 cut(s) 386, 589, 812, 1290
BstAUI TGTACA 1 cut(s) 1242
BstBI TTCGAA 2 cut(s) 289, 742
BstC8I GCNNGC 3 cut(s) 226, 716, 1037
BstDEI CTNAG 7 cut(s) 52, 161, 538, 851, 1148, 1357, 1474
BstDSI CCRYGG 1 cut(s) 1061
BstF5I GGATG 3 cut(s) 27, 1017, 1245
BstHHI GCGC 1 cut(s) 824
BstKTI GATC 4 cut(s) 286, 619, 1049, 1147
BstMAI GTCTC 1 cut(s) 611
BstMBI GATC 4 cut(s) 283, 616, 1046, 1144
BstMWI GCNNNNNNNGC 3 cut(s) 234, 354, 1418
BstNI CCWGG 3 cut(s) 953, 1350, 1430
BstNSI RCATGY 1 cut(s) 1108
BstSCI CCNGG 3 cut(s) 951, 1348, 1428
BstSFI CTRYAG 4 cut(s) 169, 1069, 1115, 1177
BstSLI GKGCMC 1 cut(s) 1445
BstV1I GCAGC 1 cut(s) 791
BstV2I GAAGAC 1 cut(s) 137
BstX2I RGATCY 1 cut(s) 283
BstYI RGATCY 1 cut(s) 283
BsuRI GGCC 4 cut(s) 718, 995, 1129, 1288
BtgI CCRYGG 1 cut(s) 1061
BtsCI GGATG 3 cut(s) 27, 1017, 1245
BtsI GCAGTG 2 cut(s) 418, 1130
BtsIMutI CAGTG 3 cut(s) 418, 1130, 1398
Cac8I GCNNGC 3 cut(s) 226, 716, 1037
CaiI CAGNNNCTG 2 cut(s) 59, 168
CciI TCATGA 1 cut(s) 132
CfoI GCGC 1 cut(s) 824
Cfr10I RCCGGY 1 cut(s) 1461
Cfr13I GGNCC 3 cut(s) 190, 993, 1186
Csp6I GTAC 3 cut(s) 174, 861, 1243
CspCI CAANNNNNGTGG 4 cut(s) 202, 237, 300, 335
CviAII CATG 6 cut(s) 133, 1062, 1105, 1165, 1515, 1562
CviQI GTAC 3 cut(s) 174, 861, 1243
DdeI CTNAG 7 cut(s) 52, 161, 538, 851, 1148, 1357, 1474
DpnI GATC 4 cut(s) 285, 618, 1048, 1146
DpnII GATC 4 cut(s) 283, 616, 1046, 1144
DraI TTTAAA 2 cut(s) 102, 1207
Eam1104I CTCTTC 4 cut(s) 386, 589, 812, 1290
EarI CTCTTC 4 cut(s) 386, 589, 812, 1290
Eco130I CCWWGG 1 cut(s) 1061
Eco147I AGGCCT 1 cut(s) 718
Eco31I GGTCTC 1 cut(s) 611
Eco47I GGWCC 2 cut(s) 190, 1186
Eco57I CTGAAG 3 cut(s) 131, 701, 1152
EcoRII CCWGG 3 cut(s) 951, 1348, 1428
EcoT14I CCWWGG 1 cut(s) 1061
EcoT22I ATGCAT 1 cut(s) 1344
ErhI CCWWGG 1 cut(s) 1061
FaeI CATG 6 cut(s) 136, 1065, 1108, 1168, 1518, 1565
FalI AAGNNNNNCTT 2 cut(s) 270, 302
FatI CATG 6 cut(s) 132, 1061, 1104, 1164, 1514, 1561
FauI CCCGC 1 cut(s) 909
FblI GTMKAC 1 cut(s) 1404
Fnu4HI GCNGC 2 cut(s) 295, 780
FokI GGATG 3 cut(s) 14, 1024, 1252
Fsp4HI GCNGC 2 cut(s) 295, 780
FspBI CTAG 3 cut(s) 1028, 1265, 1455
GlaI GCGC 1 cut(s) 823
GluI GCNGC 2 cut(s) 295, 780
HaeIII GGCC 4 cut(s) 718, 995, 1129, 1288
HapII CCGG 1 cut(s) 1462
HhaI GCGC 1 cut(s) 824
Hin1II CATG 6 cut(s) 136, 1065, 1108, 1168, 1518, 1565
Hin6I GCGC 1 cut(s) 822
HinP1I GCGC 1 cut(s) 822
HincII GTYRAC 1 cut(s) 1405
HindII GTYRAC 1 cut(s) 1405
HindIII AAGCTT 1 cut(s) 1471
HinfI GANTC 6 cut(s) 242, 266, 517, 633, 676, 1390
HpaII CCGG 1 cut(s) 1462
HphI GGTGA 3 cut(s) 319, 479, 611
Hpy166II GTNNAC 5 cut(s) 759, 883, 1279, 1405, 1443
Hpy188III TCNNGA 9 cut(s) 40, 113, 133, 440, 614, 798, 871, 1184, 1599
Hpy8I GTNNAC 5 cut(s) 759, 883, 1279, 1405, 1443
HpyAV CCTTC 6 cut(s) 340, 425, 676, 1010, 1094, 1230
HpyCH4III ACNGT 6 cut(s) 143, 462, 511, 887, 1181, 1402
HpyCH4IV ACGT 2 cut(s) 97, 560
HpyF10VI GCNNNNNNNGC 3 cut(s) 234, 354, 1418
HpyF3I CTNAG 7 cut(s) 52, 161, 538, 851, 1148, 1357, 1474
HpySE526I ACGT 2 cut(s) 97, 560
Hsp92II CATG 6 cut(s) 136, 1065, 1108, 1168, 1518, 1565
HspAI GCGC 1 cut(s) 822
Kzo9I GATC 4 cut(s) 283, 616, 1046, 1144
LguI GCTCTTC 2 cut(s) 386, 812
LmnI GCTCC 1 cut(s) 1120
Lsp1109I GCAGC 1 cut(s) 791
LweI GCATC 5 cut(s) 83, 270, 366, 833, 1538
MaeI CTAG 3 cut(s) 1028, 1265, 1455
MaeII ACGT 2 cut(s) 97, 560
MaeIII GTNAC 2 cut(s) 1000, 1172
MalI GATC 4 cut(s) 285, 618, 1048, 1146
MboI GATC 4 cut(s) 283, 616, 1046, 1144
MflI RGATCY 1 cut(s) 283
MhlI GDGCHC 1 cut(s) 1445
MluCI AATT 4 cut(s) 397, 805, 958, 1385
MlyI GAGTC 3 cut(s) 251, 275, 1384
MmeI TCCRAC 1 cut(s) 1192
Mph1103I ATGCAT 1 cut(s) 1344
MseI TTAA 5 cut(s) 93, 101, 353, 579, 1206
MslI CAYNNNNRTG 2 cut(s) 131, 1587
MspI CCGG 1 cut(s) 1462
MspR9I CCNGG 3 cut(s) 953, 1350, 1430
Mva1269I GAATGC 2 cut(s) 923, 1344
MvaI CCWGG 3 cut(s) 953, 1350, 1430
MwoI GCNNNNNNNGC 3 cut(s) 234, 354, 1418
NcoI CCATGG 1 cut(s) 1061
NdeII GATC 4 cut(s) 283, 616, 1046, 1144
NlaIII CATG 6 cut(s) 136, 1065, 1108, 1168, 1518, 1565
NlaIV GGNNCC 1 cut(s) 1188
NsiI ATGCAT 1 cut(s) 1344
NspI RCATGY 1 cut(s) 1108
NspV TTCGAA 2 cut(s) 289, 742
OliI CACNNNNGTG 1 cut(s) 1587
PagI TCATGA 1 cut(s) 132
PasI CCCWGGG 1 cut(s) 1429
PceI AGGCCT 1 cut(s) 718
PciSI GCTCTTC 2 cut(s) 386, 812
PctI GAATGC 2 cut(s) 923, 1344
PfeI GAWTC 3 cut(s) 517, 633, 676
PfoI TCCNGGA 1 cut(s) 1348
PkrI GCNGC 2 cut(s) 296, 781
PleI GAGTC 3 cut(s) 250, 274, 1384
PpsI GAGTC 3 cut(s) 250, 274, 1384
Psp1406I AACGTT 1 cut(s) 97
Psp6I CCWGG 3 cut(s) 951, 1348, 1428
PspGI CCWGG 3 cut(s) 951, 1348, 1428
PspN4I GGNNCC 1 cut(s) 1188
PspPI GGNCC 3 cut(s) 190, 993, 1186
PstI CTGCAG 1 cut(s) 173
PstNI CAGNNNCTG 2 cut(s) 59, 168
PsuI RGATCY 1 cut(s) 283
RsaI GTAC 3 cut(s) 175, 862, 1244
RsaNI GTAC 3 cut(s) 174, 861, 1243
RseI CAYNNNNRTG 2 cut(s) 131, 1587
SalI GTCGAC 1 cut(s) 1403
SapI GCTCTTC 2 cut(s) 386, 812
SaqAI TTAA 5 cut(s) 93, 101, 353, 579, 1206
SatI GCNGC 2 cut(s) 295, 780
Sau3AI GATC 4 cut(s) 283, 616, 1046, 1144
Sau96I GGNCC 3 cut(s) 190, 993, 1186
ScaI AGTACT 1 cut(s) 175
SchI GAGTC 3 cut(s) 251, 275, 1384
ScrFI CCNGG 3 cut(s) 953, 1350, 1430
SduI GDGCHC 1 cut(s) 1445
SfaNI GCATC 5 cut(s) 83, 270, 366, 833, 1538
SfcI CTRYAG 4 cut(s) 169, 1069, 1115, 1177
SfuI TTCGAA 2 cut(s) 289, 742
SinI GGWCC 2 cut(s) 190, 1186
SmiMI CAYNNNNRTG 2 cut(s) 131, 1587
SmlI CTYRAG 2 cut(s) 111, 773
SmoI CTYRAG 2 cut(s) 111, 773
Sse9I AATT 4 cut(s) 397, 805, 958, 1385
SseBI AGGCCT 1 cut(s) 718
SsiI CCGC 2 cut(s) 295, 902
SspI AATATT 1 cut(s) 1083
SspMI CTAG 3 cut(s) 1028, 1265, 1455
StuI AGGCCT 1 cut(s) 718
StyD4I CCNGG 3 cut(s) 951, 1348, 1428
StyI CCWWGG 1 cut(s) 1061
TaaI ACNGT 6 cut(s) 143, 462, 511, 887, 1181, 1402
TaiI ACGT 2 cut(s) 100, 563
TaqI TCGA 5 cut(s) 254, 264, 289, 742, 1404
TasI AATT 4 cut(s) 397, 805, 958, 1385
TatI WGTACW 2 cut(s) 173, 1242
TauI GCSGC 1 cut(s) 297
TfiI GAWTC 3 cut(s) 517, 633, 676
Tru1I TTAA 5 cut(s) 93, 101, 353, 579, 1206
Tru9I TTAA 5 cut(s) 93, 101, 353, 579, 1206
TscAI CASTG 3 cut(s) 425, 1130, 1405
TseI GCWGC 1 cut(s) 779
TspDTI ATGAA 5 cut(s) 36, 149, 471, 587, 1550
TspGWI ACGGA 1 cut(s) 804
TspRI CASTG 3 cut(s) 425, 1130, 1405
VneI GTGCAC 1 cut(s) 1441
VpaK11BI GGWCC 2 cut(s) 190, 1186
XceI RCATGY 1 cut(s) 1108
XmiI GTMKAC 1 cut(s) 1404
XspI CTAG 3 cut(s) 1028, 1265, 1455
ZrmI AGTACT 1 cut(s) 175
Zsp2I ATGCAT 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.