FvH4_3g19390

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
12561629 .. 12564955
3327 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19390.t1

Sequence Viewer

Length: 2097 bp
ATGGCCGTCAGAAACACTCTCCGGTTGTCCTTAAAGCAGTTTCATTTGCTTCTTCTTCTCATATTACTGTTGCCCTTCTCTGCAACTCCACTGACCTTCAACTTCCCCAGCTTTCCCCCTGATGTTGCCACCAATATATCAATGGAGGGAAATGCTTCCGCCGATGGCTCCCTCCGCCTCACCAAGAGTGCTCTTGACCAGGTACTAAATATGAGCTTTGGTAGAGCCACCTACAGAAAAAATTTACTCCTCCGGGAAAACTCCACCGGAAAACTTGCTGATTTCACATCAAGTTTCACGTTCGTCATTGACTCCGACAACAACAACAGGTCCGGTGACGGGCTGGCTTTCTTCCTAGCGCCAGTAGGATCCGCTCTGAACACCACATCAGGACAAGGAAGAAGTCTTGGCCTCCCTGTCAACACTACGCTGTTAGACTATACCCAGTGGACTACTGAATACCCGTTTGTGGCGGTCGAGTTTGATATCTTCCCCAATAAGGTTGTTGATTTGGGTGTGAATTACACTCATGTAGGCATAGACATCAACACCGTCAGGTCTAACGTTACAGAGCCATGGAATGGTAGTATTACGGCAGGAAATGAAAATAATGCCACCGTTACTTACGACTCCAACAAGAAAAATCTCAGTGTTGCGTTCACTACGTTTGAAAACGGAGTCCAGGTGATCCGAAATATTCATTTCTCAGTTGATCTGCTCCGATACTTACCCGATGTGGTGATTGTCGGGTTCTCCGCGGCAACAGGTACACTGACCGCACTGCATAAGATCAATTCTTGGAGGTTTGATTCAACTTCATTGATAGATGAAATAAGCACATCCAAGTCAGGAAACGCCAATATTGGACTAGTAGTTGGATTGGTTGTTGGGGGAATCGTTATCTTGGCTGTTGTGTTGGGTTTGGTTTGGTTCCTTTTCTACAGGAAGAGGAGGGAAACAAATGGGGAAATTACGGATGATGATTCTATGGTTCTTCAAGATTTGAATCCTGAAGATTTTGAAAAGGGGACAGGCCCTAGGAAATTCTCCTACAATGAATTGGCCCTTGCAACCAATAATTTTGCGCAGGAAGAAAAGCTCGGGGAGGGAGGATTTGGTGGAGTTTACAAGGGCTTCATCAAAGACATGAACGCGTATGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAAGGGTTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCGGCTCAGGCATCGGAATCTGGTGCAACTCATCGGTTGGTGCCATGATAAGAAACTCCTCCTTGTCTACGAATTCATGCCCAATGGTAGCTTGGATGCTCATTTGTTCAAACAAAAAGGCTTGTTAACTTGGGAGGTAAGGTACAAAATAGCACATGGATTGGCATCCGGGTTGCTCTATCTCCACCAAGGATGGGAACAATGTGTGCTGCACAGGGATATCAAATCTAGCAATGTTATGTTGGATGCAAATTATAACGCGAAACTTGGAGATTTTGGGTTAGCCAGACTTGTAGACCACGGAAAGCTATCGCAAACAACAGTTGTGGCCGGAACCATGGGCTACATGGCTGCGGAATATGTTACAACGGGAAAGGCTAGCAAGGAAACGGACGTCTACAGTTTCGGAGTTGTTGCATTAGAAATAGCTTGTGGGAGAAAACCCATTGATACTAGGTATGAAGGAAAGCAAATGAATATGGTGGAGTGGGTTTGGGAGCTCTATGGAGAAGGGAAAATTATTGAAGCAGCCGACCCAAAATTGTGTGGGGAGTTTGATGAGAAGCAAATGGAGTGCTTAATGATTGTTGGGTTATGGTGTGCTCATCCGGATCATAACTCAAGGCCTTTAATACAACAAGCAATCCAAGTGCTTGACTTCGAAATTCCATTGCCAAATCTCCCATTAAAGATGCCGGTGGCCTTTGCTCCTCACTTATCACTCTCGATGTCGTATAGAGGTGGCACTAGTACCACTGGAGACAAAAGTGAGTCTTCTGGATTTGATCCTTCCATCAACTCTTCACAGTTTAACACATCTAGATCTTCTACCACAAATTCGAACCCCTCGGCAGCTTCTAAGTAA

Protein Analysis

699

Amino Acids

76.83

Weight (kDa)

6.3

Isoelectric Point (pI)

30.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 282 4.1e-57 Legume lectin domain
Lectin_L-type_dom PF18483 41 - 264 1.4e-06 Legume lectin beta-barrel domain
Pkinase PF00069 362 - 627 1.4e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 569 2.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1488
AatII GACGTC 1 cut(s) 1629
Acc16I TGCGCA 1 cut(s) 1086
AccB1I GGYRCC 1 cut(s) 1272
AccB7I CCANNNNNTGG 1 cut(s) 581
AccBSI CCGCTC 1 cut(s) 374
AccI GTMKAC 3 cut(s) 1299, 1527, 1629
AccII CGCG 3 cut(s) 758, 1154, 1493
AccIII TCCGGA 1 cut(s) 1840
AciI CCGC 8 cut(s) 159, 175, 372, 473, 756, 758, 777, 1586
AclI AACGTT 1 cut(s) 564
AclWI GGATC 5 cut(s) 363, 376, 682, 1851, 2012
AcoI YGGCCR 2 cut(s) 3, 1560
AcsI RAATTY 5 cut(s) 241, 1043, 1304, 1896, 2068
AcuI CTGAAG 1 cut(s) 1032
AcyI GRCGYC 1 cut(s) 1626
AfaI GTAC 4 cut(s) 204, 769, 1376, 1984
AfiI CCNNNNNNNGG 5 cut(s) 339, 469, 499, 581, 1426
AflIII ACRYGT 1 cut(s) 1152
AgsI TTSAA 9 cut(s) 100, 671, 813, 998, 1006, 1022, 1201, 1342, 1757
AhlI ACTAGT 2 cut(s) 868, 1979
AjnI CCWGG 2 cut(s) 198, 681
AluBI AGCT 9 cut(s) 111, 216, 1099, 1163, 1323, 1540, 1661, 1732, 2087
AluI AGCT 9 cut(s) 111, 216, 1099, 1163, 1323, 1540, 1661, 1732, 2087
Alw21I GWGCWC 3 cut(s) 193, 1734, 1837
Alw26I GTCTC 1 cut(s) 1986
AlwI GGATC 5 cut(s) 363, 376, 682, 1851, 2012
Ama87I CYCGRG 1 cut(s) 1100
Aor13HI TCCGGA 1 cut(s) 1840
AoxI GGCC 7 cut(s) 3, 409, 1033, 1062, 1560, 1856, 1932
ApeKI GCWGC 5 cut(s) 1211, 1441, 1583, 1760, 2084
ApoI RAATTY 5 cut(s) 241, 1043, 1304, 1896, 2068
Asp700I GAANNNNTTC 1 cut(s) 154
AspA2I CCTAGG 1 cut(s) 1037
AspLEI GCGC 2 cut(s) 361, 1087
AspS9I GGNCC 3 cut(s) 330, 1034, 1063
AsuC2I CCSGG 2 cut(s) 254, 1402
AsuHPI GGTGA 4 cut(s) 172, 347, 697, 751
AsuII TTCGAA 2 cut(s) 1893, 2072
AsuNHI GCTAGC 1 cut(s) 1610
AvaI CYCGRG 1 cut(s) 1100
AvaII GGWCC 1 cut(s) 330
AvrII CCTAGG 1 cut(s) 1037
BamHI GGATCC 1 cut(s) 368
BanI GGYRCC 1 cut(s) 1272
BanII GRGCYC 1 cut(s) 1734
BbsI GAAGAC 1 cut(s) 1998
Bbv12I GWGCWC 3 cut(s) 193, 1734, 1837
BbvI GCAGC 4 cut(s) 1223, 1428, 1570, 1772
BccI CCATC 3 cut(s) 158, 1419, 2033
BceAI ACGGC 1 cut(s) 609
BciT130I CCWGG 2 cut(s) 200, 683
BcnI CCSGG 2 cut(s) 254, 1402
BcoDI GTCTC 1 cut(s) 1986
BcuI ACTAGT 2 cut(s) 868, 1979
BfaI CTAG 8 cut(s) 356, 869, 1038, 1461, 1611, 1686, 1980, 2052
BfmI CTRYAG 3 cut(s) 232, 940, 1630
BfoI RGCGCY 1 cut(s) 362
BglII AGATCT 1 cut(s) 2054
BisI GCNGC 6 cut(s) 759, 1212, 1442, 1584, 1761, 2085
BlnI CCTAGG 1 cut(s) 1037
BlsI GCNGC 6 cut(s) 760, 1213, 1443, 1585, 1762, 2086
Bme1390I CCNGG 4 cut(s) 200, 254, 683, 1402
Bme18I GGWCC 1 cut(s) 330
BmeT110I CYCGRG 1 cut(s) 1100
BmgT120I GGNCC 3 cut(s) 330, 1034, 1063
BmiI GGNNCC 5 cut(s) 169, 370, 932, 1274, 1567
BmrFI CCNGG 4 cut(s) 200, 254, 683, 1402
BmrI ACTGGG 1 cut(s) 439
BmsI GCATC 5 cut(s) 1252, 1318, 1406, 1468, 1914
BmtI GCTAGC 1 cut(s) 1614
BmuI ACTGGG 1 cut(s) 439
BpiI GAAGAC 1 cut(s) 1998
BpmI CTGGAG 1 cut(s) 2010
Bpu10I CCTNAGC 1 cut(s) 1238
Bpu14I TTCGAA 2 cut(s) 1893, 2072
BpuEI CTTGAG 1 cut(s) 1837
BpuMI CCSGG 2 cut(s) 254, 1402
BsaBI GATNNNNATC 2 cut(s) 1005, 1396
BsaHI GRCGYC 1 cut(s) 1626
BsaJI CCNNGG 7 cut(s) 575, 756, 1037, 1420, 1531, 1569, 2079
BsaWI WCCGGW 4 cut(s) 21, 266, 332, 1840
BsaXI ACNNNNNCTCC 4 cut(s) 669, 699, 1358, 1388
Bsc4I CCNNNNNNNGG 5 cut(s) 339, 469, 499, 581, 1426
Bse118I RCCGGY 1 cut(s) 1927
Bse1I ACTGG 3 cut(s) 362, 445, 1993
Bse3DI GCAATG 2 cut(s) 1471, 1901
Bse8I GATNNNNATC 2 cut(s) 1005, 1396
BseAI TCCGGA 1 cut(s) 1840
BseBI CCWGG 2 cut(s) 200, 683
BseDI CCNNGG 7 cut(s) 575, 756, 1037, 1420, 1531, 1569, 2079
BseGI GGATG 7 cut(s) 839, 982, 1333, 1397, 1430, 1483, 1837
BseJI GATNNNNATC 2 cut(s) 1005, 1396
BseLI CCNNNNNNNGG 5 cut(s) 339, 469, 499, 581, 1426
BseMI GCAATG 2 cut(s) 1471, 1901
BseMII CTCAG 3 cut(s) 661, 720, 1252
BseNI ACTGG 3 cut(s) 362, 445, 1993
BseRI GAGGAG 4 cut(s) 239, 964, 1280, 1932
BseXI GCAGC 4 cut(s) 1223, 1428, 1570, 1772
BseYI CCCAGC 1 cut(s) 107
BsgI GTGCAG 1 cut(s) 1427
Bsh1236I CGCG 3 cut(s) 758, 1154, 1493
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 7 cut(s) 5, 411, 1035, 1064, 1562, 1858, 1934
BshNI GGYRCC 1 cut(s) 1272
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 3 cut(s) 193, 1734, 1837
BsiHKCI CYCGRG 1 cut(s) 1100
BsiSI CCGG 8 cut(s) 22, 253, 267, 333, 1401, 1563, 1841, 1928
BslFI GGGAC 1 cut(s) 1042
BslI CCNNNNNNNGG 5 cut(s) 339, 469, 499, 581, 1426
BsmAI GTCTC 1 cut(s) 1986
BsmFI GGGAC 1 cut(s) 1042
BsnI GGCC 7 cut(s) 5, 411, 1035, 1064, 1562, 1858, 1934
BsoBI CYCGRG 1 cut(s) 1100
Bsp119I TTCGAA 2 cut(s) 1893, 2072
Bsp1286I GDGCHC 3 cut(s) 193, 1734, 1837
Bsp13I TCCGGA 1 cut(s) 1840
Bsp143I GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
Bsp19I CCATGG 2 cut(s) 575, 1569
BspACI CCGC 8 cut(s) 159, 175, 372, 473, 756, 758, 777, 1586
BspANI GGCC 7 cut(s) 5, 411, 1035, 1064, 1562, 1858, 1934
BspCNI CTCAG 3 cut(s) 660, 719, 1251
BspEI TCCGGA 1 cut(s) 1840
BspFNI CGCG 3 cut(s) 758, 1154, 1493
BspLI GGNNCC 5 cut(s) 169, 370, 932, 1274, 1567
BspOI GCTAGC 1 cut(s) 1614
BspPI GGATC 5 cut(s) 363, 376, 682, 1851, 2012
BspT104I TTCGAA 2 cut(s) 1893, 2072
BspT107I GGYRCC 1 cut(s) 1272
BsrBI CCGCTC 1 cut(s) 374
BsrDI GCAATG 2 cut(s) 1471, 1901
BsrFI RCCGGY 1 cut(s) 1927
BsrI ACTGG 3 cut(s) 362, 445, 1993
BssAI RCCGGY 1 cut(s) 1927
BssECI CCNNGG 7 cut(s) 575, 756, 1037, 1420, 1531, 1569, 2079
BssMI GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
BssNI GRCGYC 1 cut(s) 1626
BssT1I CCWWGG 4 cut(s) 575, 1037, 1420, 1569
Bst2UI CCWGG 2 cut(s) 200, 683
Bst4CI ACNGT 6 cut(s) 69, 553, 619, 1555, 1634, 2040
Bst6I CTCTTC 2 cut(s) 941, 2038
BstACI GRCGYC 1 cut(s) 1626
BstBI TTCGAA 2 cut(s) 1893, 2072
BstC8I GCNNGC 2 cut(s) 345, 1612
BstDEI CTNAG 4 cut(s) 647, 706, 1238, 2091
BstDSI CCRYGG 4 cut(s) 575, 756, 1531, 1569
BstF5I GGATG 7 cut(s) 839, 982, 1333, 1397, 1430, 1483, 1837
BstFNI CGCG 3 cut(s) 758, 1154, 1493
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 2 cut(s) 361, 1087
BstKTI GATC 7 cut(s) 371, 690, 715, 792, 1846, 2020, 2057
BstMAI GTCTC 1 cut(s) 1986
BstMBI GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 2 cut(s) 174, 1160
BstNI CCWGG 2 cut(s) 200, 683
BstSCI CCNGG 4 cut(s) 198, 252, 681, 1400
BstSFI CTRYAG 3 cut(s) 232, 940, 1630
BstUI CGCG 3 cut(s) 758, 1154, 1493
BstV1I GCAGC 4 cut(s) 1223, 1428, 1570, 1772
BstV2I GAAGAC 1 cut(s) 1998
BstX2I RGATCY 2 cut(s) 368, 2054
BstYI RGATCY 2 cut(s) 368, 2054
BsuRI GGCC 7 cut(s) 5, 411, 1035, 1064, 1562, 1858, 1934
BtgI CCRYGG 4 cut(s) 575, 756, 1531, 1569
BtsCI GGATG 7 cut(s) 839, 982, 1333, 1397, 1430, 1483, 1837
BtsI GCAGTG 1 cut(s) 779
BtsIMutI CAGTG 6 cut(s) 89, 452, 655, 770, 779, 1986
Cac8I GCNNGC 2 cut(s) 345, 1612
CfoI GCGC 2 cut(s) 361, 1087
Cfr10I RCCGGY 1 cut(s) 1927
Cfr13I GGNCC 3 cut(s) 330, 1034, 1063
Cfr42I CCGCGG 1 cut(s) 759
CsiI ACCWGGT 1 cut(s) 198
Csp6I GTAC 4 cut(s) 203, 768, 1375, 1983
CspCI CAANNNNNGTGG 2 cut(s) 1539, 1574
CviAII CATG 8 cut(s) 530, 576, 1147, 1277, 1309, 1388, 1570, 1579
CviQI GTAC 4 cut(s) 203, 768, 1375, 1983
DdeI CTNAG 4 cut(s) 647, 706, 1238, 2091
DpnI GATC 7 cut(s) 370, 689, 714, 791, 1845, 2019, 2056
DpnII GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
EaeI YGGCCR 2 cut(s) 3, 1560
Eam1104I CTCTTC 2 cut(s) 941, 2038
EarI CTCTTC 2 cut(s) 941, 2038
EciI GGCGGA 2 cut(s) 148, 164
Ecl136II GAGCTC 1 cut(s) 1732
Eco130I CCWWGG 4 cut(s) 575, 1037, 1420, 1569
Eco147I AGGCCT 1 cut(s) 1858
Eco24I GRGCYC 1 cut(s) 1734
Eco32I GATATC 3 cut(s) 487, 1176, 1453
Eco47I GGWCC 1 cut(s) 330
Eco53kI GAGCTC 1 cut(s) 1732
Eco57I CTGAAG 1 cut(s) 1032
Eco88I CYCGRG 1 cut(s) 1100
EcoICRI GAGCTC 1 cut(s) 1732
EcoO109I RGGNCCY 1 cut(s) 1034
EcoRI GAATTC 1 cut(s) 1304
EcoRII CCWGG 2 cut(s) 198, 681
EcoRV GATATC 3 cut(s) 487, 1176, 1453
EcoT14I CCWWGG 4 cut(s) 575, 1037, 1420, 1569
EcoT38I GRGCYC 1 cut(s) 1734
ErhI CCWWGG 4 cut(s) 575, 1037, 1420, 1569
FaeI CATG 8 cut(s) 533, 579, 1150, 1280, 1312, 1391, 1573, 1582
FalI AAGNNNNNCTT 2 cut(s) 1990, 2022
FaqI GGGAC 1 cut(s) 1042
FatI CATG 8 cut(s) 529, 575, 1146, 1276, 1308, 1387, 1569, 1578
FblI GTMKAC 3 cut(s) 1299, 1527, 1629
Fnu4HI GCNGC 6 cut(s) 759, 1212, 1442, 1584, 1761, 2085
FokI GGATG 7 cut(s) 826, 989, 1340, 1384, 1437, 1490, 1824
FriOI GRGCYC 1 cut(s) 1734
Fsp4HI GCNGC 6 cut(s) 759, 1212, 1442, 1584, 1761, 2085
FspBI CTAG 8 cut(s) 356, 869, 1038, 1461, 1611, 1686, 1980, 2052
FspI TGCGCA 1 cut(s) 1086
GlaI GCGC 2 cut(s) 360, 1086
GluI GCNGC 6 cut(s) 759, 1212, 1442, 1584, 1761, 2085
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 1 cut(s) 2010
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 7 cut(s) 5, 411, 1035, 1064, 1562, 1858, 1934
HapII CCGG 8 cut(s) 22, 253, 267, 333, 1401, 1563, 1841, 1928
HhaI GCGC 2 cut(s) 361, 1087
Hin1I GRCGYC 1 cut(s) 1626
Hin1II CATG 8 cut(s) 533, 579, 1150, 1280, 1312, 1391, 1573, 1582
Hin6I GCGC 2 cut(s) 359, 1085
HinP1I GCGC 2 cut(s) 359, 1085
HincII GTYRAC 2 cut(s) 421, 1359
HindII GTYRAC 2 cut(s) 421, 1359
HinfI GANTC 9 cut(s) 311, 629, 678, 809, 894, 983, 1006, 1249, 2003
HpaI GTTAAC 1 cut(s) 1359
HpaII CCGG 8 cut(s) 22, 253, 267, 333, 1401, 1563, 1841, 1928
HphI GGTGA 4 cut(s) 172, 347, 697, 751
Hpy166II GTNNAC 9 cut(s) 421, 450, 660, 770, 1126, 1300, 1359, 1528, 1630
Hpy188I TCNGA 7 cut(s) 11, 316, 378, 692, 722, 1248, 1640
Hpy188III TCNNGA 9 cut(s) 194, 390, 849, 998, 1010, 1841, 1957, 2010, 2052
Hpy8I GTNNAC 9 cut(s) 421, 450, 660, 770, 1126, 1300, 1359, 1528, 1630
HpyAV CCTTC 6 cut(s) 85, 106, 1195, 1688, 1736, 2031
HpyCH4III ACNGT 6 cut(s) 69, 553, 619, 1555, 1634, 2040
HpyCH4IV ACGT 4 cut(s) 299, 564, 665, 1626
HpyCH4V TGCA 8 cut(s) 83, 784, 1070, 1211, 1258, 1444, 1481, 1649
HpyF10VI GCNNNNNNNGC 2 cut(s) 174, 1160
HpyF3I CTNAG 4 cut(s) 647, 706, 1238, 2091
HpySE526I ACGT 4 cut(s) 299, 564, 665, 1626
Hsp92I GRCGYC 1 cut(s) 1626
Hsp92II CATG 8 cut(s) 533, 579, 1150, 1280, 1312, 1391, 1573, 1582
HspAI GCGC 2 cut(s) 359, 1085
Kpn2I TCCGGA 1 cut(s) 1840
KspAI GTTAAC 1 cut(s) 1359
KspI CCGCGG 1 cut(s) 759
Kzo9I GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
LmnI GCTCC 4 cut(s) 173, 723, 1729, 1945
Lsp1109I GCAGC 4 cut(s) 1223, 1428, 1570, 1772
LweI GCATC 5 cut(s) 1252, 1318, 1406, 1468, 1914
MabI ACCWGGT 1 cut(s) 198
MaeI CTAG 8 cut(s) 356, 869, 1038, 1461, 1611, 1686, 1980, 2052
MaeII ACGT 4 cut(s) 299, 564, 665, 1626
MaeIII GTNAC 4 cut(s) 335, 565, 619, 1594
MalI GATC 7 cut(s) 370, 689, 714, 791, 1845, 2019, 2056
MbiI CCGCTC 1 cut(s) 374
MboI GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
MflI RGATCY 2 cut(s) 368, 2054
MhlI GDGCHC 3 cut(s) 193, 1734, 1837
MluI ACGCGT 1 cut(s) 1152
MlyI GAGTC 4 cut(s) 305, 623, 687, 2012
MmeI TCCRAC 4 cut(s) 339, 657, 856, 1455
MroI TCCGGA 1 cut(s) 1840
MroXI GAANNNNTTC 1 cut(s) 154
MseI TTAA 7 cut(s) 32, 1167, 1358, 1811, 1862, 1919, 2043
MspA1I CMGCKG 1 cut(s) 758
MspI CCGG 8 cut(s) 22, 253, 267, 333, 1401, 1563, 1841, 1928
MspR9I CCNGG 4 cut(s) 200, 254, 683, 1402
MvaI CCWGG 2 cut(s) 200, 683
MvnI CGCG 3 cut(s) 758, 1154, 1493
MwoI GCNNNNNNNGC 2 cut(s) 174, 1160
NciI CCSGG 2 cut(s) 254, 1402
NcoI CCATGG 2 cut(s) 575, 1569
NdeII GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
NheI GCTAGC 1 cut(s) 1610
NlaIII CATG 8 cut(s) 533, 579, 1150, 1280, 1312, 1391, 1573, 1582
NlaIV GGNNCC 5 cut(s) 169, 370, 932, 1274, 1567
NmeAIII GCCGAG 1 cut(s) 2060
NmuCI GTSAC 1 cut(s) 335
NsbI TGCGCA 1 cut(s) 1086
NspV TTCGAA 2 cut(s) 1893, 2072
PceI AGGCCT 1 cut(s) 1858
PdmI GAANNNNTTC 1 cut(s) 154
PfeI GAWTC 5 cut(s) 809, 894, 983, 1006, 1249
PflMI CCANNNNNTGG 1 cut(s) 581
PfoI TCCNGGA 1 cut(s) 252
PkrI GCNGC 6 cut(s) 760, 1213, 1443, 1585, 1762, 2086
PleI GAGTC 4 cut(s) 305, 623, 686, 2011
PpsI GAGTC 4 cut(s) 305, 623, 686, 2011
PsiI TTATAA 1 cut(s) 1488
Psp124BI GAGCTC 1 cut(s) 1734
Psp1406I AACGTT 1 cut(s) 564
Psp6I CCWGG 2 cut(s) 198, 681
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 2 cut(s) 198, 681
PspN4I GGNNCC 5 cut(s) 169, 370, 932, 1274, 1567
PspPI GGNCC 3 cut(s) 330, 1034, 1063
PsuI RGATCY 2 cut(s) 368, 2054
RsaI GTAC 4 cut(s) 204, 769, 1376, 1984
RsaNI GTAC 4 cut(s) 203, 768, 1375, 1983
SacI GAGCTC 1 cut(s) 1734
SacII CCGCGG 1 cut(s) 759
SaqAI TTAA 7 cut(s) 32, 1167, 1358, 1811, 1862, 1919, 2043
SatI GCNGC 6 cut(s) 759, 1212, 1442, 1584, 1761, 2085
Sau3AI GATC 7 cut(s) 368, 687, 712, 789, 1843, 2017, 2054
Sau96I GGNCC 3 cut(s) 330, 1034, 1063
SchI GAGTC 4 cut(s) 305, 623, 687, 2012
ScrFI CCNGG 4 cut(s) 200, 254, 683, 1402
SduI GDGCHC 3 cut(s) 193, 1734, 1837
SexAI ACCWGGT 1 cut(s) 198
SfaNI GCATC 5 cut(s) 1252, 1318, 1406, 1468, 1914
SfcI CTRYAG 3 cut(s) 232, 940, 1630
Sfr303I CCGCGG 1 cut(s) 759
SfuI TTCGAA 2 cut(s) 1893, 2072
SgrBI CCGCGG 1 cut(s) 759
SinI GGWCC 1 cut(s) 330
SmlI CTYRAG 1 cut(s) 1852
SmoI CTYRAG 1 cut(s) 1852
SpeI ACTAGT 2 cut(s) 868, 1979
SseBI AGGCCT 1 cut(s) 1858
SsiI CCGC 8 cut(s) 159, 175, 372, 473, 756, 758, 777, 1586
SspI AATATT 2 cut(s) 697, 862
SspMI CTAG 8 cut(s) 356, 869, 1038, 1461, 1611, 1686, 1980, 2052
SstI GAGCTC 1 cut(s) 1734
StuI AGGCCT 1 cut(s) 1858
StyD4I CCNGG 4 cut(s) 198, 252, 681, 1400
StyI CCWWGG 4 cut(s) 575, 1037, 1420, 1569
TaaI ACNGT 6 cut(s) 69, 553, 619, 1555, 1634, 2040
TaiI ACGT 4 cut(s) 302, 567, 668, 1629
TaqI TCGA 4 cut(s) 477, 1893, 1958, 2072
TauI GCSGC 1 cut(s) 761
TfiI GAWTC 5 cut(s) 809, 894, 983, 1006, 1249
Tru1I TTAA 7 cut(s) 32, 1167, 1358, 1811, 1862, 1919, 2043
Tru9I TTAA 7 cut(s) 32, 1167, 1358, 1811, 1862, 1919, 2043
TscAI CASTG 6 cut(s) 96, 452, 655, 777, 786, 1993
TseFI GTSAC 1 cut(s) 335
TseI GCWGC 5 cut(s) 1211, 1441, 1583, 1760, 2084
Tsp45I GTSAC 1 cut(s) 335
TspGWI ACGGA 4 cut(s) 690, 989, 1548, 1637
TspRI CASTG 6 cut(s) 96, 452, 655, 777, 786, 1993
Van91I CCANNNNNTGG 1 cut(s) 581
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 5 cut(s) 241, 1043, 1304, 1896, 2068
XbaI TCTAGA 1 cut(s) 2051
XcmI CCANNNNNNNNNTGG 3 cut(s) 139, 1321, 1576
XmaJI CCTAGG 1 cut(s) 1037
XmiI GTMKAC 3 cut(s) 1299, 1527, 1629
XmnI GAANNNNTTC 1 cut(s) 154
XspI CTAG 8 cut(s) 356, 869, 1038, 1461, 1611, 1686, 1980, 2052
ZraI GACGTC 1 cut(s) 1627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.