RLG00000028159

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
19591160 .. 19597375
6216 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028159

Sequence Viewer

Length: 2592 bp
ATGATGTCTGAAAGCAGAAGCAGCAGTACCCAAGCAATCTGCTTGTGCAGCAATATTTGCTTCCTAATTATTTCCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTTAGTGTAAATCAGTTCGACACTAGTACATATGGAGTTGTCTATGAAGGTGAGGCTCGGCCTTTATCGGGAAATATTGAACTGAACACAGGCAATTTATTTGGTGTTGGACATGCTACGTATGCAGAGCCTTTGCACCTATGGGACAATGCTACTGGGTCACTGGCAGACTTCACTACTCATTTCACTTTCATGGTCGACTCTGGTGACTTGGACTTCGGCGATGGATTTGCCTTTTACCTTGCTTCTGTTGGCTACGGTATTCCACCCAACTCTGGCAGTAGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCTTGTCCACAAACAAGATTGTAACCGTAGAGTTCGACACCTGGGGAAACGCAGGAGATGGTTGGGATCCAGCGGGGCCGCATATAGGGATAAACATCAATGAAATCTCTTCGGTTAAGTACGCCAATTGGAATACCAGTAACATCACCGGGAAGATTGGCAATGCATGGATTACTTACAACGCTACTGCCAACAACCTTACTGTGTTTTGGACATTCAAGGAGAACCCAAACCCTGTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCGAAAGATTCTCCCAGAAAATGTTACAATTGGTTTTTCTGCTTCCTGCGGATCCGGATCTTATACTGCGCAGTATTTTTTAAATTCATGGGCGTTTAATTCGACTTTGTTGGATAACAATATCAGAAGAGCCAAAAGCAAGGGAAAGAAGAAAAAGATATTCTTGATACTGGTCATTGCAGTACCTGGCTTCATTTTCACGCTTGGTGCAGTCATATGTTGGTTGATGGTATTATGGAATCGGAGAAACAATTACTCTGGCCCAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCAGACGATAGAAGGCTAGGCCAAGGAGGGTCAGGACAAGTATATAAAGGACTCCTACAAGACCTTGGAGGCTGCACAGTTGCTGTGAAGAGAATCTTTGCAAGATCTGATCAGCAATATGAGAAAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCTAACAACAGCCTTGACACCCATCTATTTGGCACCAGAACAACCCTGCAATGGGATAACAGGTACAAGATAGCTATGGGATTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTTCTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGGTGATGACTTTAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATTCCCGCTTCAGGTCTCAGACAAGAGAGGTGGCAGGGACTTTTGGATACATGGCCCCTGAATATGCTATGGAAGGGAGGGCTAGTAAGGAATCTGACATTTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGCGGAAGGAAGACTTACCAAGACGGTGAATATCACATGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTGGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAAAGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGCACTCACCCCAACAACAAGGAAAGACCAAAAGCAGGACAGCTAGCTCGCTTATCTAGTTACTTGAAATTGGGTCAGCTGCAGCGCCAATCTTTTCTGGAACCATACAAAACCAAGTATGCATACCATAACACCTATCCGAAGCACCTAGTACGCTTTGCTCGTAACCTTGTGAGCCTAGCTTTTGAATTTCAGGCTGATGCTTTTGCTAAGAAACTTGGTTTTGCCTCTTCACTTCGAGCTAGTCTGGAAGAGAATCTGTCAGCTATGAACATCGATCCATGGTACTCGCCATATCACCGTTCTCATCCCCCACTTGTTCAAAGATCTGAAAACCTCCAATCAGAATTGGCTCGTGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCGAGATCTCCCAGAGCCGATGGTGCTTCGGGAAGATTCTTCGAAGCTGGTGTTGATGGTGCCCTTACGGCGTCGTATCTACTGGATGGGTTTTCGGAGAGGACACGAGGGGCAGGGCTGGTGACGGTGACGTGTACGGCGGACTTGCCCTATTTTACTTGGGGTGATGTTGTTCAAGTTGACACTTGGGTTAGTGCCCCAGGGAAGAATGTGTGTGGACTGACTAGGAGATTATCCAAAATACCTGATGAGGTTCGGAGTGAAATAGAGCCTTACTTTATGAATTCTGCTCCTATTGTGGAGGAGGATGGCAGGAAACTGCAGAAACTTGACGACAATATTGCGGGCTTTGTCCGTACTGGTTTAACTGGATTGTCCTTTATGATACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

864

Amino Acids

96.41

Weight (kDa)

7.04

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 36 - 281 1.1e-58 Legume lectin domain
Pkinase PF00069 354 - 616 2.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 355 - 556 8.6e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 786
AccB1I GGYRCC 2 cut(s) 1325, 2258
AccI GTMKAC 1 cut(s) 309
AccIII TCCGGA 1 cut(s) 770
AciI CCGC 8 cut(s) 506, 512, 765, 1213, 1516, 1647, 2339, 2543
AclWI GGATC 6 cut(s) 494, 507, 762, 775, 781, 2078
AcsI RAATTY 3 cut(s) 799, 1994, 2482
AcuI CTGAAG 1 cut(s) 1504
AcyI GRCGYC 1 cut(s) 2270
AfiI CCNNNNNNNGG 9 cut(s) 179, 386, 518, 1050, 1344, 1345, 1521, 1841, 2197
AflIII ACRYGT 1 cut(s) 2330
AgsI TTSAA 7 cut(s) 191, 412, 652, 1873, 1994, 2129, 2375
AhlI ACTAGT 1 cut(s) 134
AjiI CACGTC 1 cut(s) 2331
AjnI CCWGG 5 cut(s) 473, 676, 901, 1230, 2398
Alw21I GWGCWC 1 cut(s) 1811
Alw26I GTCTC 2 cut(s) 988, 1530
Alw44I GTGCAC 1 cut(s) 1807
AlwI GGATC 6 cut(s) 494, 507, 762, 775, 781, 2078
AlwNI CAGNNNCTG 3 cut(s) 902, 986, 1139
Aor13HI TCCGGA 1 cut(s) 770
AoxI GGCC 6 cut(s) 170, 509, 976, 1075, 1377, 1563
ApaLI GTGCAC 1 cut(s) 1807
ApeKI GCWGC 7 cut(s) 21, 48, 1040, 1128, 1736, 1885, 1888
ApoI RAATTY 3 cut(s) 799, 1994, 2482
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
Asp700I GAANNNNTTC 1 cut(s) 1184
AspLEI GCGC 2 cut(s) 787, 1893
AspS9I GGNCC 3 cut(s) 509, 977, 1564
AsuC2I CCSGG 1 cut(s) 583
AsuII TTCGAA 1 cut(s) 2241
AsuNHI GCTAGC 2 cut(s) 1000, 1849
BaeGI GKGCMC 3 cut(s) 1811, 2263, 2398
BamHI GGATCC 2 cut(s) 499, 767
BanI GGYRCC 2 cut(s) 1325, 2258
BarI GAAGNNNNNNTAC 2 cut(s) 10, 42
BauI CACGAG 3 cut(s) 1505, 2160, 2304
BbsI GAAGAC 2 cut(s) 1177, 1661
Bbv12I GWGCWC 1 cut(s) 1811
BbvCI CCTCAGC 1 cut(s) 1381
BbvI GCAGC 7 cut(s) 33, 60, 1027, 1115, 1748, 1872, 1900
BceAI ACGGC 2 cut(s) 2283, 2352
BcgI CGANNNNNNTGC 4 cut(s) 323, 357, 2522, 2556
BciT130I CCWGG 5 cut(s) 475, 678, 903, 1232, 2400
BciVI GTATCC 1 cut(s) 1550
BclI TGATCA 1 cut(s) 1165
BcnI CCSGG 1 cut(s) 583
BcoDI GTCTC 2 cut(s) 988, 1530
BcuI ACTAGT 1 cut(s) 134
BfmI CTRYAG 2 cut(s) 1886, 2519
BfoI RGCGCY 1 cut(s) 1894
BfuI GTATCC 1 cut(s) 1550
BglI GCCNNNNNGGC 1 cut(s) 2267
BglII AGATCT 3 cut(s) 1160, 2132, 2204
BisI GCNGC 9 cut(s) 22, 49, 512, 1041, 1129, 1213, 1737, 1886, 1889
BlpI GCTNAGC 1 cut(s) 1500
BlsI GCNGC 9 cut(s) 23, 50, 513, 1042, 1130, 1214, 1738, 1887, 1890
Bme1390I CCNGG 6 cut(s) 475, 583, 678, 903, 1232, 2400
BmgBI CACGTC 1 cut(s) 2331
BmgT120I GGNCC 3 cut(s) 509, 977, 1564
BmiI GGNNCC 7 cut(s) 501, 510, 769, 1327, 1566, 1908, 2260
BmrFI CCNGG 6 cut(s) 475, 583, 678, 903, 1232, 2400
BmrI ACTGGG 3 cut(s) 276, 410, 974
BmsI GCATC 2 cut(s) 1396, 1996
BmtI GCTAGC 2 cut(s) 1004, 1853
BmuI ACTGGG 3 cut(s) 276, 410, 974
BpiI GAAGAC 2 cut(s) 1177, 1661
Bpu10I CCTNAGC 1 cut(s) 1381
Bpu1102I GCTNAGC 1 cut(s) 1500
Bpu14I TTCGAA 1 cut(s) 2241
BpuEI CTTGAG 1 cut(s) 1013
BpuMI CCSGG 1 cut(s) 583
Bsa29I ATCGAT 1 cut(s) 2082
BsaAI YACGTR 1 cut(s) 231
BsaBI GATNNNNATC 2 cut(s) 527, 772
BsaHI GRCGYC 1 cut(s) 2270
BsaI GGTCTC 1 cut(s) 1530
BsaJI CCNNGG 7 cut(s) 474, 1078, 1120, 1632, 2087, 2398, 2399
BsaWI WCCGGW 1 cut(s) 770
BsaXI ACNNNNNCTCC 2 cut(s) 1579, 1609
Bsc4I CCNNNNNNNGG 9 cut(s) 179, 386, 518, 1050, 1344, 1345, 1521, 1841, 2197
Bse1I ACTGG 9 cut(s) 271, 279, 405, 570, 891, 980, 2286, 2563, 2572
Bse3DI GCAATG 3 cut(s) 601, 891, 1349
Bse8I GATNNNNATC 2 cut(s) 527, 772
BseAI TCCGGA 1 cut(s) 770
BseBI CCWGG 5 cut(s) 475, 678, 903, 1232, 2400
BseCI ATCGAT 1 cut(s) 2082
BseDI CCNNGG 7 cut(s) 474, 1078, 1120, 1632, 2087, 2398, 2399
BseGI GGATG 4 cut(s) 100, 2113, 2290, 2512
BseJI GATNNNNATC 2 cut(s) 527, 772
BseLI CCNNNNNNNGG 9 cut(s) 179, 386, 518, 1050, 1344, 1345, 1521, 1841, 2197
BseMI GCAATG 3 cut(s) 601, 891, 1349
BseMII CTCAG 3 cut(s) 1395, 1541, 2165
BseNI ACTGG 9 cut(s) 271, 279, 405, 570, 891, 980, 2286, 2563, 2572
BseRI GAGGAG 1 cut(s) 2516
BseSI GKGCMC 3 cut(s) 1811, 2263, 2398
BseXI GCAGC 7 cut(s) 33, 60, 1027, 1115, 1748, 1872, 1900
BsgI GTGCAG 4 cut(s) 67, 945, 1114, 1256
BshFI GGCC 6 cut(s) 172, 511, 978, 1077, 1379, 1565
BshNI GGYRCC 2 cut(s) 1325, 2258
BshVI ATCGAT 1 cut(s) 2082
BsiHKAI GWGCWC 1 cut(s) 1811
BsiSI CCGG 2 cut(s) 582, 771
BslFI GGGAC 2 cut(s) 269, 1561
BslI CCNNNNNNNGG 9 cut(s) 179, 386, 518, 1050, 1344, 1345, 1521, 1841, 2197
BsmAI GTCTC 2 cut(s) 988, 1530
BsmFI GGGAC 2 cut(s) 269, 1561
BsmI GAATGC 1 cut(s) 1274
BsnI GGCC 6 cut(s) 172, 511, 978, 1077, 1379, 1565
Bso31I GGTCTC 1 cut(s) 1530
Bsp119I TTCGAA 1 cut(s) 2241
Bsp1286I GDGCHC 3 cut(s) 1811, 2263, 2398
Bsp13I TCCGGA 1 cut(s) 770
Bsp1720I GCTNAGC 1 cut(s) 1500
Bsp19I CCATGG 1 cut(s) 2087
BspACI CCGC 8 cut(s) 506, 512, 765, 1213, 1516, 1647, 2339, 2543
BspANI GGCC 6 cut(s) 172, 511, 978, 1077, 1379, 1565
BspCNI CTCAG 3 cut(s) 1394, 1540, 2166
BspDI ATCGAT 1 cut(s) 2082
BspEI TCCGGA 1 cut(s) 770
BspHI TCATGA 1 cut(s) 1255
BspLI GGNNCC 7 cut(s) 501, 510, 769, 1327, 1566, 1908, 2260
BspMAI CTGCAG 2 cut(s) 1890, 2523
BspOI GCTAGC 2 cut(s) 1004, 1853
BspPI GGATC 6 cut(s) 494, 507, 762, 775, 781, 2078
BspQI GCTCTTC 1 cut(s) 838
BspT104I TTCGAA 1 cut(s) 2241
BspT107I GGYRCC 2 cut(s) 1325, 2258
BspTNI GGTCTC 1 cut(s) 1530
BsrDI GCAATG 3 cut(s) 601, 891, 1349
BsrI ACTGG 9 cut(s) 271, 279, 405, 570, 891, 980, 2286, 2563, 2572
BssECI CCNNGG 7 cut(s) 474, 1078, 1120, 1632, 2087, 2398, 2399
BssNI GRCGYC 1 cut(s) 2270
BssSI CACGAG 3 cut(s) 1505, 2160, 2304
BssT1I CCWWGG 4 cut(s) 1078, 1120, 1632, 2087
Bst2BI CACGAG 3 cut(s) 1505, 2160, 2304
Bst2UI CCWGG 5 cut(s) 475, 678, 903, 1232, 2400
Bst4CI ACNGT 8 cut(s) 371, 460, 637, 1135, 1455, 1670, 2108, 2326
Bst6I CTCTTC 5 cut(s) 547, 838, 1139, 2041, 2052
BstACI GRCGYC 1 cut(s) 2270
BstAPI GCANNNNNTGC 1 cut(s) 57
BstBAI YACGTR 1 cut(s) 231
BstBI TTCGAA 1 cut(s) 2241
BstC8I GCNNGC 5 cut(s) 1002, 1645, 1851, 1855, 2545
BstDEI CTNAG 6 cut(s) 1381, 1476, 1500, 1527, 2016, 2174
BstDSI CCRYGG 1 cut(s) 2087
BstF5I GGATG 4 cut(s) 100, 2113, 2290, 2512
BstH2I RGCGCY 1 cut(s) 1894
BstHHI GCGC 2 cut(s) 787, 1893
BstMAI GTCTC 2 cut(s) 988, 1530
BstMWI GCNNNNNNNGC 6 cut(s) 21, 48, 57, 233, 2222, 2267
BstNI CCWGG 5 cut(s) 475, 678, 903, 1232, 2400
BstNSI RCATGY 2 cut(s) 227, 1684
BstSCI CCNGG 6 cut(s) 473, 581, 676, 901, 1230, 2398
BstSFI CTRYAG 2 cut(s) 1886, 2519
BstSLI GKGCMC 3 cut(s) 1811, 2263, 2398
BstSNI TACGTA 1 cut(s) 231
BstV1I GCAGC 7 cut(s) 33, 60, 1027, 1115, 1748, 1872, 1900
BstV2I GAAGAC 2 cut(s) 1177, 1661
BstX2I RGATCY 6 cut(s) 499, 767, 773, 1160, 2132, 2204
BstXI CCANNNNNNTGG 1 cut(s) 1322
BstYI RGATCY 6 cut(s) 499, 767, 773, 1160, 2132, 2204
Bsu15I ATCGAT 1 cut(s) 2082
BsuI GTATCC 1 cut(s) 1550
BsuRI GGCC 6 cut(s) 172, 511, 978, 1077, 1379, 1565
BsuTUI ATCGAT 1 cut(s) 2082
BtgI CCRYGG 1 cut(s) 2087
BtgZI GCGATG 1 cut(s) 348
BtrI CACGTC 1 cut(s) 2331
BtsCI GGATG 4 cut(s) 100, 2113, 2290, 2512
BtsI GCAGTG 1 cut(s) 1421
BtsIMutI CAGTG 3 cut(s) 272, 1421, 2587
Cac8I GCNNGC 5 cut(s) 1002, 1645, 1851, 1855, 2545
CaiI CAGNNNCTG 3 cut(s) 902, 986, 1139
CciI TCATGA 1 cut(s) 1255
CfoI GCGC 2 cut(s) 787, 1893
Cfr13I GGNCC 3 cut(s) 509, 977, 1564
ClaI ATCGAT 1 cut(s) 2082
CseI GACGC 2 cut(s) 1742, 2259
CsiI ACCWGGT 1 cut(s) 1230
CspCI CAANNNNNGTGG 2 cut(s) 1521, 1556
DdeI CTNAG 6 cut(s) 1381, 1476, 1500, 1527, 2016, 2174
DraI TTTAAA 1 cut(s) 798
Eam1104I CTCTTC 5 cut(s) 547, 838, 1139, 2041, 2052
EarI CTCTTC 5 cut(s) 547, 838, 1139, 2041, 2052
EciI GGCGGA 1 cut(s) 2354
Eco105I TACGTA 1 cut(s) 231
Eco130I CCWWGG 4 cut(s) 1078, 1120, 1632, 2087
Eco31I GGTCTC 1 cut(s) 1530
Eco32I GATATC 1 cut(s) 1435
Eco57I CTGAAG 1 cut(s) 1504
EcoRI GAATTC 1 cut(s) 2482
EcoRII CCWGG 5 cut(s) 473, 676, 901, 1230, 2398
EcoRV GATATC 1 cut(s) 1435
EcoT14I CCWWGG 4 cut(s) 1078, 1120, 1632, 2087
EcoT22I ATGCAT 3 cut(s) 601, 1288, 1930
ErhI CCWWGG 4 cut(s) 1078, 1120, 1632, 2087
FalI AAGNNNNNCTT 8 cut(s) 863, 895, 989, 1021, 1136, 1168, 1642, 1674
FaqI GGGAC 2 cut(s) 269, 1561
FauI CCCGC 3 cut(s) 499, 1523, 2536
FauNDI CATATG 2 cut(s) 142, 932
FbaI TGATCA 1 cut(s) 1165
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 9 cut(s) 22, 49, 512, 1041, 1129, 1213, 1737, 1886, 1889
FokI GGATG 4 cut(s) 87, 2100, 2297, 2519
Fsp4HI GCNGC 9 cut(s) 22, 49, 512, 1041, 1129, 1213, 1737, 1886, 1889
FspI TGCGCA 1 cut(s) 786
GlaI GCGC 2 cut(s) 786, 1892
GluI GCNGC 9 cut(s) 22, 49, 512, 1041, 1129, 1213, 1737, 1886, 1889
HaeII RGCGCY 1 cut(s) 1894
HaeIII GGCC 6 cut(s) 172, 511, 978, 1077, 1379, 1565
HapII CCGG 2 cut(s) 582, 771
HgaI GACGC 2 cut(s) 1742, 2259
HhaI GCGC 2 cut(s) 787, 1893
Hin1I GRCGYC 1 cut(s) 2270
Hin6I GCGC 2 cut(s) 785, 1891
HinP1I GCGC 2 cut(s) 785, 1891
HincII GTYRAC 3 cut(s) 310, 712, 2380
HindII GTYRAC 3 cut(s) 310, 712, 2380
HindIII AAGCTT 1 cut(s) 1478
HpaII CCGG 2 cut(s) 582, 771
Hpy166II GTNNAC 8 cut(s) 310, 398, 441, 712, 1809, 2334, 2380, 2417
Hpy8I GTNNAC 8 cut(s) 310, 398, 441, 712, 1809, 2334, 2380, 2417
Hpy99I CGWCG 1 cut(s) 2275
HpyAV CCTTC 5 cut(s) 152, 1062, 1397, 1577, 1644
HpyCH4III ACNGT 8 cut(s) 371, 460, 637, 1135, 1455, 1670, 2108, 2326
HpyCH4IV ACGT 3 cut(s) 230, 1449, 2330
HpyF10VI GCNNNNNNNGC 6 cut(s) 21, 48, 57, 233, 2222, 2267
HpyF3I CTNAG 6 cut(s) 1381, 1476, 1500, 1527, 2016, 2174
HpySE526I ACGT 3 cut(s) 230, 1449, 2330
Hsp92I GRCGYC 1 cut(s) 2270
HspAI GCGC 2 cut(s) 785, 1891
Kpn2I TCCGGA 1 cut(s) 770
Ksp22I TGATCA 1 cut(s) 1165
LguI GCTCTTC 1 cut(s) 838
LmnI GCTCC 2 cut(s) 2170, 2494
Lsp1109I GCAGC 7 cut(s) 33, 60, 1027, 1115, 1748, 1872, 1900
LweI GCATC 2 cut(s) 1396, 1996
MabI ACCWGGT 1 cut(s) 1230
MaeII ACGT 3 cut(s) 230, 1449, 2330
MaeIII GTNAC 9 cut(s) 270, 317, 454, 572, 739, 1865, 1970, 2320, 2326
MfeI CAATTG 2 cut(s) 559, 744
MflI RGATCY 6 cut(s) 499, 767, 773, 1160, 2132, 2204
MhlI GDGCHC 3 cut(s) 1811, 2263, 2398
MlyI GAGTC 2 cut(s) 305, 1101
MmeI TCCRAC 4 cut(s) 199, 807, 1777, 2148
Mph1103I ATGCAT 3 cut(s) 601, 1288, 1930
MroI TCCGGA 1 cut(s) 770
MroXI GAANNNNTTC 1 cut(s) 1184
MseI TTAA 6 cut(s) 429, 549, 797, 813, 1217, 2564
MslI CAYNNNNRTG 2 cut(s) 302, 1404
MspA1I CMGCKG 3 cut(s) 506, 1739, 1885
MspI CCGG 2 cut(s) 582, 771
MspR9I CCNGG 6 cut(s) 475, 583, 678, 903, 1232, 2400
MunI CAATTG 2 cut(s) 559, 744
Mva1269I GAATGC 1 cut(s) 1274
MvaI CCWGG 5 cut(s) 475, 678, 903, 1232, 2400
MwoI GCNNNNNNNGC 6 cut(s) 21, 48, 57, 233, 2222, 2267
NciI CCSGG 1 cut(s) 583
NcoI CCATGG 1 cut(s) 2087
NdeI CATATG 2 cut(s) 142, 932
NheI GCTAGC 2 cut(s) 1000, 1849
NlaIV GGNNCC 7 cut(s) 501, 510, 769, 1327, 1566, 1908, 2260
NmeAIII GCCGAG 1 cut(s) 148
NmuCI GTSAC 4 cut(s) 270, 317, 2320, 2326
NsbI TGCGCA 1 cut(s) 786
NsiI ATGCAT 3 cut(s) 601, 1288, 1930
NspI RCATGY 2 cut(s) 227, 1684
NspV TTCGAA 1 cut(s) 2241
PagI TCATGA 1 cut(s) 1255
PasI CCCWGGG 1 cut(s) 2399
PciSI GCTCTTC 1 cut(s) 838
PcsI WCGNNNNNNNCGW 1 cut(s) 1966
PctI GAATGC 1 cut(s) 1274
PdmI GAANNNNTTC 1 cut(s) 1184
PfeI GAWTC 8 cut(s) 724, 955, 1149, 1511, 1601, 2062, 2187, 2235
PkrI GCNGC 9 cut(s) 23, 50, 513, 1042, 1130, 1214, 1738, 1887, 1890
PleI GAGTC 2 cut(s) 305, 1101
PpsI GAGTC 2 cut(s) 305, 1101
Ppu21I YACGTR 1 cut(s) 231
Psp6I CCWGG 5 cut(s) 473, 676, 901, 1230, 2398
PspGI CCWGG 5 cut(s) 473, 676, 901, 1230, 2398
PspN4I GGNNCC 7 cut(s) 501, 510, 769, 1327, 1566, 1908, 2260
PspPI GGNCC 3 cut(s) 509, 977, 1564
PstI CTGCAG 2 cut(s) 1890, 2523
PstNI CAGNNNCTG 3 cut(s) 902, 986, 1139
PsuI RGATCY 6 cut(s) 499, 767, 773, 1160, 2132, 2204
PvuII CAGCTG 2 cut(s) 1739, 1885
RseI CAYNNNNRTG 2 cut(s) 302, 1404
SalI GTCGAC 1 cut(s) 308
SapI GCTCTTC 1 cut(s) 838
SaqAI TTAA 6 cut(s) 429, 549, 797, 813, 1217, 2564
SatI GCNGC 9 cut(s) 22, 49, 512, 1041, 1129, 1213, 1737, 1886, 1889
Sau96I GGNCC 3 cut(s) 509, 977, 1564
SchI GAGTC 2 cut(s) 305, 1101
ScrFI CCNGG 6 cut(s) 475, 583, 678, 903, 1232, 2400
SduI GDGCHC 3 cut(s) 1811, 2263, 2398
SexAI ACCWGGT 1 cut(s) 1230
SfaNI GCATC 2 cut(s) 1396, 1996
SfcI CTRYAG 2 cut(s) 1886, 2519
SfuI TTCGAA 1 cut(s) 2241
SmiMI CAYNNNNRTG 2 cut(s) 302, 1404
SmlI CTYRAG 1 cut(s) 992
SmoI CTYRAG 1 cut(s) 992
SnaBI TACGTA 1 cut(s) 231
SpeI ACTAGT 1 cut(s) 134
SsiI CCGC 8 cut(s) 506, 512, 765, 1213, 1516, 1647, 2339, 2543
SspI AATATT 4 cut(s) 55, 187, 1726, 2539
StyD4I CCNGG 6 cut(s) 473, 581, 676, 901, 1230, 2398
StyI CCWWGG 4 cut(s) 1078, 1120, 1632, 2087
TaaI ACNGT 8 cut(s) 371, 460, 637, 1135, 1455, 1670, 2108, 2326
TaiI ACGT 3 cut(s) 233, 1452, 2333
TaqI TCGA 9 cut(s) 129, 309, 468, 818, 1225, 1768, 2044, 2082, 2241
TatI WGTACW 1 cut(s) 137
TauI GCSGC 2 cut(s) 514, 1215
TfiI GAWTC 8 cut(s) 724, 955, 1149, 1511, 1601, 2062, 2187, 2235
Tru1I TTAA 6 cut(s) 429, 549, 797, 813, 1217, 2564
Tru9I TTAA 6 cut(s) 429, 549, 797, 813, 1217, 2564
TscAI CASTG 2 cut(s) 279, 1421
TseFI GTSAC 4 cut(s) 270, 317, 2320, 2326
TseI GCWGC 7 cut(s) 21, 48, 1040, 1128, 1736, 1885, 1888
Tsp45I GTSAC 4 cut(s) 270, 317, 2320, 2326
TspGWI ACGGA 1 cut(s) 2543
TspRI CASTG 2 cut(s) 279, 1421
VneI GTGCAC 1 cut(s) 1807
XapI RAATTY 3 cut(s) 799, 1994, 2482
XceI RCATGY 2 cut(s) 227, 1684
XcmI CCANNNNNNNNNTGG 1 cut(s) 1692
XmiI GTMKAC 1 cut(s) 309
XmnI GAANNNNTTC 1 cut(s) 1184
Zsp2I ATGCAT 3 cut(s) 601, 1288, 1930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.