FvH4_7g15082

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000038
Physical Location & Seq
Reverse (-)
13164213 .. 13166216
2004 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15082.t1

Sequence Viewer

Length: 1617 bp
ATGATGATGTCTGAAAGCAGAAGCAGCAGCATGCGCAATATTTGCTTCCTATGTATTTTCATCAACTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCACTATAGATCAGTTCGACGAGAGTGCAAATGGAGTTGTCTTTGAAGGTGATGCCAAGTTTTCGTCGGGAGTGATTGAGCTTAACCCAGGCACGTACTTCGACGTTGGCCATGCTACATACGCAGAGCCTCTGCACCTATATGACACTGCCACTGGCTCACTGGCAGACTTCACTACTCATTTCACTTTCAAGGTCGACTATGGTACTCTTAATGAAGGTTGGAAGTTCAGCGACGGAATTGCCTTCTTCCTTGCTCCTGTTGGCTACGGCATTCCACCAAACTCTGGCGGTGGCGAACTGGGATTGTTCAACACCACCACCAATTTTAATGACTTCTCCAACAACATGATTGTAACTGTAGAGTTCGACAGCTGGGGAAACGACTGGGATCCACATCCCCCCGCCGCGCATATTGGGATCAACATCAATAAAATATCCTCAGCTATAACTGCCAACTGGAGTCCCAGTGACATCATCACCGGCAAGATTGGTAATGCATGGATAACTTATAACGCTACCGCCACCAATCTTACTGTGTTTTGGACATTCGATGACATCACCGGCCGCGTTGATCCAAACATATCTAGTACTTCTTCCCTTACTTACCAAGTTGACTTGCAAAAGATTCTCCCGGAAAGGGTCACAGTTGGTTTTTCTGCTTCTTCCGGATTATTCCTTGGCCGGCATTTTTTATGTTCATGGACATTTAAGTCGACTTTGTTGGATAAGGATATTATAAGAGGAGCAGAAAGCAAAAACAGAGGAGCAGAAAGCAAGAGAAACAAGAAGAAGATACTCTTGATACTGGACATTGCAGTACCTGCTGGCTTCATTTTGACGCTTGGTGCGGTGATCATATGTTGGTTGATGGTATTAAGGAACCGGAGAAACAATTACTCAGGCGAAGTCTCTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGGTTGCTGCCACAAACGGGTTTGCCGACGATAGAAGGCTAGGCCAAGGAGGCATTAAGCTTGGTGATTTCGGTATCGCTAAGCTTGTAGATCCCCGGTTGAGGTCTCAGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCACCGGAATATGCTACTGAAGGGAGGGCTAGTAAGGAATCTGATATGTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAGGACTTACCAAGACGGTGAATATCACCTGCCACTATTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTAAACGCAGCTGATGAAAGATTGGAAATGAAGTATGATCCAAATGAAATGAAATGCTTATTGATTGTTGGACTATGGTGTACTCACCCCAATCACAAGGCAAGACCAAAAGCAGGACAGGTGATGAAGGTTATTCAGCATGAGGCACCATTGCCGGAACTTCCACAAGACATGCATAATGATCCAGAAGTACCTCATTACCAGTCTCAAATTGCATATTCTCGATCAGATATACCTCCTCAACAAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

539

Amino Acids

59.89

Weight (kDa)

5.8

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 273 9.5e-60 Legume lectin domain
Pkinase PF00069 368 - 498 2.8e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 368 - 435 7.2e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 609, 836
AarI CACCTGC 1 cut(s) 1326
AasI GACNNNNNNGTC 1 cut(s) 808
Acc16I TGCGCA 1 cut(s) 35
Acc36I ACCTGC 2 cut(s) 928, 1326
AccB1I GGYRCC 2 cut(s) 1201, 1510
AccB7I CCANNNNNTGG 2 cut(s) 383, 1057
AccI GTMKAC 2 cut(s) 294, 812
AccII CGCG 2 cut(s) 506, 666
AccIII TCCGGA 1 cut(s) 764
AciI CCGC 6 cut(s) 387, 501, 504, 618, 664, 947
AclWI GGATC 7 cut(s) 482, 495, 524, 665, 1142, 1397, 1541
AcoI YGGCCR 3 cut(s) 205, 661, 778
AcuI CTGAAG 1 cut(s) 1239
AfaI GTAC 6 cut(s) 194, 304, 688, 918, 1447, 1557
AfiI CCNNNNNNNGG 6 cut(s) 383, 736, 1057, 1074, 1158, 1478
AgsI TTSAA 3 cut(s) 143, 289, 409
AjnI CCWGG 1 cut(s) 184
AluBI AGCT 7 cut(s) 178, 471, 542, 1024, 1117, 1141, 1376
AluI AGCT 7 cut(s) 178, 471, 542, 1024, 1117, 1141, 1376
Alw26I GTCTC 3 cut(s) 1012, 1167, 1575
AlwI GGATC 7 cut(s) 482, 495, 524, 665, 1142, 1397, 1541
AlwNI CAGNNNCTG 1 cut(s) 920
Aor13HI TCCGGA 1 cut(s) 764
AoxI GGCC 4 cut(s) 205, 661, 778, 1099
ApeKI GCWGC 4 cut(s) 24, 27, 1064, 1373
AspLEI GCGC 2 cut(s) 36, 508
AsuC2I CCSGG 2 cut(s) 731, 1153
AsuHPI GGTGA 9 cut(s) 158, 568, 649, 961, 1133, 1307, 1319, 1442, 1498
AsuNHI GCTAGC 1 cut(s) 1024
BalI TGGCCA 1 cut(s) 207
BamHI GGATCC 1 cut(s) 487
BanI GGYRCC 2 cut(s) 1201, 1510
BbvCI CCTCAGC 1 cut(s) 538
BbvI GCAGC 4 cut(s) 36, 39, 1051, 1385
BccI CCATC 1 cut(s) 961
BceAI ACGGC 1 cut(s) 382
BcgI CGANNNNNNTGC 6 cut(s) 104, 138, 178, 212, 320, 354
BciT130I CCWGG 1 cut(s) 186
BciVI GTATCC 1 cut(s) 1187
BclI TGATCA 1 cut(s) 951
BcnI CCSGG 2 cut(s) 731, 1153
BcoDI GTCTC 3 cut(s) 1012, 1167, 1575
BfaI CTAG 5 cut(s) 684, 1025, 1097, 1230, 1615
BfmI CTRYAG 2 cut(s) 102, 456
BfuAI ACCTGC 2 cut(s) 928, 1326
BfuI GTATCC 1 cut(s) 1187
BglI GCCNNNNNGGC 1 cut(s) 1107
BisI GCNGC 6 cut(s) 25, 28, 504, 664, 1065, 1374
BlpI GCTNAGC 1 cut(s) 1137
BlsI GCNGC 6 cut(s) 26, 29, 505, 665, 1066, 1375
BmcAI AGTACT 1 cut(s) 688
Bme1390I CCNGG 3 cut(s) 186, 731, 1153
BmiI GGNNCC 4 cut(s) 489, 980, 1203, 1512
BmrFI CCNGG 3 cut(s) 186, 731, 1153
BmrI ACTGGG 3 cut(s) 407, 493, 558
BmsI GCATC 1 cut(s) 139
BmtI GCTAGC 1 cut(s) 1028
BmuI ACTGGG 3 cut(s) 407, 493, 558
BpmI CTGGAG 1 cut(s) 577
Bpu10I CCTNAGC 1 cut(s) 538
Bpu1102I GCTNAGC 1 cut(s) 1137
BpuEI CTTGAG 1 cut(s) 1037
BpuMI CCSGG 2 cut(s) 731, 1153
BsaAI YACGTR 1 cut(s) 192
BsaBI GATNNNNATC 2 cut(s) 492, 521
BsaI GGTCTC 1 cut(s) 1167
BsaJI CCNNGG 5 cut(s) 184, 775, 1102, 1151, 1269
BsaWI WCCGGW 3 cut(s) 764, 981, 1204
BsaXI ACNNNNNCTCC 4 cut(s) 550, 580, 1216, 1246
Bsc4I CCNNNNNNNGG 6 cut(s) 383, 736, 1057, 1074, 1158, 1478
Bse118I RCCGGY 3 cut(s) 578, 659, 780
Bse1I ACTGG 8 cut(s) 256, 264, 402, 488, 560, 564, 909, 1567
Bse3DI GCAATG 2 cut(s) 909, 1514
Bse8I GATNNNNATC 2 cut(s) 492, 521
BseAI TCCGGA 1 cut(s) 764
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 5 cut(s) 184, 775, 1102, 1151, 1269
BseGI GGATG 2 cut(s) 85, 493
BseJI GATNNNNATC 2 cut(s) 492, 521
BseLI CCNNNNNNNGG 6 cut(s) 383, 736, 1057, 1074, 1158, 1478
BseMI GCAATG 2 cut(s) 909, 1514
BseMII CTCAG 3 cut(s) 552, 1011, 1178
BseNI ACTGG 8 cut(s) 256, 264, 402, 488, 560, 564, 909, 1567
BseRI GAGGAG 3 cut(s) 855, 876, 1593
BseX3I CGGCCG 1 cut(s) 661
BseXI GCAGC 4 cut(s) 36, 39, 1051, 1385
BseYI CCCAGC 1 cut(s) 471
BsgI GTGCAG 1 cut(s) 215
Bsh1236I CGCG 2 cut(s) 506, 666
Bsh1285I CGRYCG 1 cut(s) 664
BshFI GGCC 4 cut(s) 207, 663, 780, 1101
BshNI GGYRCC 2 cut(s) 1201, 1510
BsiEI CGRYCG 1 cut(s) 664
BsiSI CCGG 9 cut(s) 579, 660, 731, 765, 781, 982, 1153, 1205, 1520
BslFI GGGAC 2 cut(s) 546, 1198
BslI CCNNNNNNNGG 6 cut(s) 383, 736, 1057, 1074, 1158, 1478
BsmAI GTCTC 3 cut(s) 1012, 1167, 1575
BsmFI GGGAC 2 cut(s) 546, 1198
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 4 cut(s) 207, 663, 780, 1101
Bso31I GGTCTC 1 cut(s) 1167
Bsp13I TCCGGA 1 cut(s) 764
Bsp1720I GCTNAGC 1 cut(s) 1137
BspACI CCGC 6 cut(s) 387, 501, 504, 618, 664, 947
BspANI GGCC 4 cut(s) 207, 663, 780, 1101
BspCNI CTCAG 3 cut(s) 551, 1010, 1177
BspEI TCCGGA 1 cut(s) 764
BspFNI CGCG 2 cut(s) 506, 666
BspLI GGNNCC 4 cut(s) 489, 980, 1203, 1512
BspMI ACCTGC 2 cut(s) 928, 1326
BspOI GCTAGC 1 cut(s) 1028
BspPI GGATC 7 cut(s) 482, 495, 524, 665, 1142, 1397, 1541
BspT107I GGYRCC 2 cut(s) 1201, 1510
BspTNI GGTCTC 1 cut(s) 1167
BsrDI GCAATG 2 cut(s) 909, 1514
BsrFI RCCGGY 3 cut(s) 578, 659, 780
BsrI ACTGG 8 cut(s) 256, 264, 402, 488, 560, 564, 909, 1567
BssAI RCCGGY 3 cut(s) 578, 659, 780
BssECI CCNNGG 5 cut(s) 184, 775, 1102, 1151, 1269
BssT1I CCWWGG 3 cut(s) 775, 1102, 1269
Bst2UI CCWGG 1 cut(s) 186
Bst4CI ACNGT 4 cut(s) 457, 634, 745, 1307
BstAPI GCANNNNNTGC 2 cut(s) 42, 920
BstBAI YACGTR 1 cut(s) 192
BstC8I GCNNGC 4 cut(s) 32, 782, 925, 1026
BstDEI CTNAG 4 cut(s) 538, 997, 1137, 1164
BstF5I GGATG 2 cut(s) 85, 493
BstFNI CGCG 2 cut(s) 506, 666
BstHHI GCGC 2 cut(s) 36, 508
BstMAI GTCTC 3 cut(s) 1012, 1167, 1575
BstMCI CGRYCG 1 cut(s) 664
BstMWI GCNNNNNNNGC 7 cut(s) 24, 33, 42, 218, 548, 920, 1107
BstNI CCWGG 1 cut(s) 186
BstNSI RCATGY 2 cut(s) 34, 1540
BstSCI CCNGG 3 cut(s) 184, 729, 1151
BstSFI CTRYAG 2 cut(s) 102, 456
BstUI CGCG 2 cut(s) 506, 666
BstV1I GCAGC 4 cut(s) 36, 39, 1051, 1385
BstX2I RGATCY 2 cut(s) 487, 1147
BstYI RGATCY 2 cut(s) 487, 1147
BstZI CGGCCG 1 cut(s) 661
BsuI GTATCC 1 cut(s) 1187
BsuRI GGCC 4 cut(s) 207, 663, 780, 1101
BtsCI GGATG 2 cut(s) 85, 493
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 4 cut(s) 243, 249, 257, 571
BveI ACCTGC 2 cut(s) 928, 1326
Cac8I GCNNGC 4 cut(s) 32, 782, 925, 1026
CaiI CAGNNNCTG 1 cut(s) 920
CfoI GCGC 2 cut(s) 36, 508
Cfr10I RCCGGY 3 cut(s) 578, 659, 780
CseI GACGC 1 cut(s) 946
Csp6I GTAC 6 cut(s) 193, 303, 687, 917, 1446, 1556
CspCI CAANNNNNGTGG 2 cut(s) 1158, 1193
CviAII CATG 8 cut(s) 31, 209, 445, 597, 798, 1198, 1505, 1537
CviQI GTAC 6 cut(s) 193, 303, 687, 917, 1446, 1556
DdeI CTNAG 4 cut(s) 538, 997, 1137, 1164
DrdI GACNNNNNNGTC 1 cut(s) 808
DseDI GACNNNNNNGTC 1 cut(s) 808
EaeI YGGCCR 3 cut(s) 205, 661, 778
EagI CGGCCG 1 cut(s) 661
EclXI CGGCCG 1 cut(s) 661
Eco130I CCWWGG 3 cut(s) 775, 1102, 1269
Eco31I GGTCTC 1 cut(s) 1167
Eco52I CGGCCG 1 cut(s) 661
Eco57I CTGAAG 1 cut(s) 1239
EcoRII CCWGG 1 cut(s) 184
EcoT14I CCWWGG 3 cut(s) 775, 1102, 1269
EcoT22I ATGCAT 2 cut(s) 598, 1542
ErhI CCWWGG 3 cut(s) 775, 1102, 1269
FaeI CATG 8 cut(s) 34, 212, 448, 600, 801, 1201, 1508, 1540
FalI AAGNNNNNCTT 6 cut(s) 881, 913, 1013, 1045, 1279, 1311
FaqI GGGAC 2 cut(s) 546, 1198
FatI CATG 8 cut(s) 30, 208, 444, 596, 797, 1197, 1504, 1536
FauI CCCGC 1 cut(s) 508
FauNDI CATATG 1 cut(s) 956
FbaI TGATCA 1 cut(s) 951
FblI GTMKAC 2 cut(s) 294, 812
Fnu4HI GCNGC 6 cut(s) 25, 28, 504, 664, 1065, 1374
FokI GGATG 2 cut(s) 72, 480
Fsp4HI GCNGC 6 cut(s) 25, 28, 504, 664, 1065, 1374
FspBI CTAG 5 cut(s) 684, 1025, 1097, 1230, 1615
FspI TGCGCA 1 cut(s) 35
GlaI GCGC 2 cut(s) 35, 507
GluI GCNGC 6 cut(s) 25, 28, 504, 664, 1065, 1374
GsaI CCCAGC 1 cut(s) 475
GsuI CTGGAG 1 cut(s) 577
HaeIII GGCC 4 cut(s) 207, 663, 780, 1101
HapII CCGG 9 cut(s) 579, 660, 731, 765, 781, 982, 1153, 1205, 1520
HgaI GACGC 1 cut(s) 946
HhaI GCGC 2 cut(s) 36, 508
Hin1II CATG 8 cut(s) 34, 212, 448, 600, 801, 1201, 1508, 1540
Hin6I GCGC 2 cut(s) 34, 506
HinP1I GCGC 2 cut(s) 34, 506
HincII GTYRAC 3 cut(s) 295, 712, 813
HindII GTYRAC 3 cut(s) 295, 712, 813
HindIII AAGCTT 2 cut(s) 1115, 1139
HinfI GANTC 3 cut(s) 559, 724, 1238
HpaII CCGG 9 cut(s) 579, 660, 731, 765, 781, 982, 1153, 1205, 1520
HphI GGTGA 9 cut(s) 158, 568, 649, 961, 1133, 1307, 1319, 1442, 1498
Hpy166II GTNNAC 4 cut(s) 295, 712, 813, 1446
Hpy188I TCNGA 5 cut(s) 13, 1012, 1167, 1243, 1594
Hpy188III TCNNGA 6 cut(s) 165, 765, 898, 1016, 1550, 1587
Hpy8I GTNNAC 4 cut(s) 295, 712, 813, 1446
Hpy99I CGWCG 5 cut(s) 119, 166, 203, 335, 1088
HpyAV CCTTC 8 cut(s) 106, 137, 308, 352, 1086, 1214, 1281, 1486
HpyCH4III ACNGT 4 cut(s) 457, 634, 745, 1307
HpyCH4IV ACGT 2 cut(s) 191, 201
HpyCH4V TGCA 8 cut(s) 125, 232, 596, 718, 914, 1355, 1540, 1580
HpyF10VI GCNNNNNNNGC 7 cut(s) 24, 33, 42, 218, 548, 920, 1107
HpyF3I CTNAG 4 cut(s) 538, 997, 1137, 1164
HpySE526I ACGT 2 cut(s) 191, 201
Hsp92II CATG 8 cut(s) 34, 212, 448, 600, 801, 1201, 1508, 1540
HspAI GCGC 2 cut(s) 34, 506
Kpn2I TCCGGA 1 cut(s) 764
KroI GCCGGC 1 cut(s) 780
KroNI GCCGGC 1 cut(s) 782
Ksp22I TGATCA 1 cut(s) 951
LmnI GCTCC 3 cut(s) 358, 842, 863
Lsp1109I GCAGC 4 cut(s) 36, 39, 1051, 1385
LweI GCATC 1 cut(s) 139
MaeI CTAG 5 cut(s) 684, 1025, 1097, 1230, 1615
MaeII ACGT 2 cut(s) 191, 201
MaeIII GTNAC 3 cut(s) 451, 566, 739
MboII GAAGA 6 cut(s) 61, 337, 684, 753, 898, 901
MflI RGATCY 2 cut(s) 487, 1147
MlsI TGGCCA 1 cut(s) 207
MluCI AATT 6 cut(s) 336, 421, 991, 1055, 1275, 1575
MluNI TGGCCA 1 cut(s) 207
MlyI GAGTC 1 cut(s) 568
MmeI TCCRAC 4 cut(s) 299, 462, 801, 1414
Mox20I TGGCCA 1 cut(s) 207
Mph1103I ATGCAT 2 cut(s) 598, 1542
MroI TCCGGA 1 cut(s) 764
MroNI GCCGGC 1 cut(s) 780
MscI TGGCCA 1 cut(s) 207
MseI TTAA 6 cut(s) 180, 309, 426, 807, 974, 1113
MslI CAYNNNNRTG 1 cut(s) 237
Msp20I TGGCCA 1 cut(s) 207
MspA1I CMGCKG 2 cut(s) 471, 1376
MspI CCGG 9 cut(s) 579, 660, 731, 765, 781, 982, 1153, 1205, 1520
MspR9I CCNGG 3 cut(s) 186, 731, 1153
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 1 cut(s) 186
MvnI CGCG 2 cut(s) 506, 666
MwoI GCNNNNNNNGC 7 cut(s) 24, 33, 42, 218, 548, 920, 1107
NaeI GCCGGC 1 cut(s) 782
NciI CCSGG 2 cut(s) 731, 1153
NdeI CATATG 1 cut(s) 956
NgoMIV GCCGGC 1 cut(s) 780
NheI GCTAGC 1 cut(s) 1024
NlaIII CATG 8 cut(s) 34, 212, 448, 600, 801, 1201, 1508, 1540
NlaIV GGNNCC 4 cut(s) 489, 980, 1203, 1512
NmuCI GTSAC 2 cut(s) 566, 739
NsbI TGCGCA 1 cut(s) 35
NsiI ATGCAT 2 cut(s) 598, 1542
NspI RCATGY 2 cut(s) 34, 1540
PaeI GCATGC 1 cut(s) 34
PaqCI CACCTGC 1 cut(s) 1326
PcsI WCGNNNNNNNCGW 1 cut(s) 1080
PctI GAATGC 1 cut(s) 369
PdiI GCCGGC 1 cut(s) 782
PfeI GAWTC 2 cut(s) 724, 1238
PflMI CCANNNNNTGG 2 cut(s) 383, 1057
PfoI TCCNGGA 1 cut(s) 729
PkrI GCNGC 6 cut(s) 26, 29, 505, 665, 1066, 1375
PleI GAGTC 1 cut(s) 567
PpsI GAGTC 1 cut(s) 567
Ppu21I YACGTR 1 cut(s) 192
PsiI TTATAA 2 cut(s) 609, 836
Psp6I CCWGG 1 cut(s) 184
PspFI CCCAGC 1 cut(s) 471
PspGI CCWGG 1 cut(s) 184
PspN4I GGNNCC 4 cut(s) 489, 980, 1203, 1512
PstNI CAGNNNCTG 1 cut(s) 920
PsuI RGATCY 2 cut(s) 487, 1147
PvuII CAGCTG 2 cut(s) 471, 1376
RsaI GTAC 6 cut(s) 194, 304, 688, 918, 1447, 1557
RsaNI GTAC 6 cut(s) 193, 303, 687, 917, 1446, 1556
RseI CAYNNNNRTG 1 cut(s) 237
SalI GTCGAC 2 cut(s) 293, 811
SaqAI TTAA 6 cut(s) 180, 309, 426, 807, 974, 1113
SatI GCNGC 6 cut(s) 25, 28, 504, 664, 1065, 1374
ScaI AGTACT 1 cut(s) 688
SchI GAGTC 1 cut(s) 568
ScrFI CCNGG 3 cut(s) 186, 731, 1153
SfaNI GCATC 1 cut(s) 139
SfcI CTRYAG 2 cut(s) 102, 456
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 1 cut(s) 1016
SmoI CTYRAG 1 cut(s) 1016
SphI GCATGC 1 cut(s) 34
Sse9I AATT 6 cut(s) 336, 421, 991, 1055, 1275, 1575
SsiI CCGC 6 cut(s) 387, 501, 504, 618, 664, 947
SspI AATATT 2 cut(s) 40, 1363
SspMI CTAG 5 cut(s) 684, 1025, 1097, 1230, 1615
StyD4I CCNGG 3 cut(s) 184, 729, 1151
StyI CCWWGG 3 cut(s) 775, 1102, 1269
TaaI ACNGT 4 cut(s) 457, 634, 745, 1307
TaiI ACGT 2 cut(s) 194, 204
TaqI TCGA 7 cut(s) 114, 198, 294, 465, 648, 812, 1588
TasI AATT 6 cut(s) 336, 421, 991, 1055, 1275, 1575
TatI WGTACW 2 cut(s) 686, 1445
TauI GCSGC 2 cut(s) 506, 666
TfiI GAWTC 2 cut(s) 724, 1238
Tru1I TTAA 6 cut(s) 180, 309, 426, 807, 974, 1113
Tru9I TTAA 6 cut(s) 180, 309, 426, 807, 974, 1113
TscAI CASTG 4 cut(s) 250, 256, 264, 571
TseFI GTSAC 2 cut(s) 566, 739
TseI GCWGC 4 cut(s) 24, 27, 1064, 1373
Tsp45I GTSAC 2 cut(s) 566, 739
TspDTI ATGAA 9 cut(s) 49, 327, 786, 919, 1395, 1409, 1425, 1430, 1505
TspGWI ACGGA 1 cut(s) 348
TspRI CASTG 4 cut(s) 250, 256, 264, 571
Van91I CCANNNNNTGG 2 cut(s) 383, 1057
XceI RCATGY 2 cut(s) 34, 1540
XcmI CCANNNNNNNNNTGG 2 cut(s) 256, 1329
XmiI GTMKAC 2 cut(s) 294, 812
XspI CTAG 5 cut(s) 684, 1025, 1097, 1230, 1615
ZrmI AGTACT 1 cut(s) 688
Zsp2I ATGCAT 2 cut(s) 598, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.