Rh5CG288800

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
31613440 .. 31614267
828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG288800.1

Sequence Viewer

Length: 828 bp
ATGGTTGTCAATCACTCCGGTGACATGACATCAATCCGGTTAGGAAAACTTCAATTCCTTCTTGCACTAAGACTGTATCTCTTGATCTTTCTCTTCTGCCCTTCTGCAACTCCACTAAGCTTTACTTTCCCGAATTTTAATCAAGATGATATTGTCAATATAACTCGAGAAGGAGACGCTTATATTGACAAGGAATTTCTCCGCCTCACCAATAGCTCACAAGACCAGCGACCGAGTGGAATTGGTCGAGCCAGGTACTACCAGCCCTTCCTGCTCCGAGAAAATACCACTGGAAAACTCGCCGATTTCACCACAAATTTTACATTCTCCATTTATGCGCCAAATGATGCCAATTTAACATGGGGTGCTGGTGATGGACTAGCCTTCTTCTTAGCGCCAGACAGGTCCGAACTCAACAACTCAGGCGGCTTTGCTCTCGGCCTCCCCTTGTATCATCAGTACCCATTTGTGGTGGTGGAATTTGATATCTTCAAGAACTACGAAGCCATTCCCAACAAAAATGAAACCGTCGACGACCCATCCGAAGATCATGTGGGTATCGACGTCAACTCTTTCAAGTCGCGGATTACCGTCCCTTGGAATGGTAGTATTGTCAATGGACAAAACAATGATGTCCGGATCAGTTACAGTTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACTTTTTTGATGAATGGTACCAAAAAGATGAGCTATTTTTCTTACACAGTTGATCTAAAGAATGTCTTACCGGATCGGGTCATTGTTGGGTTCTCGGCTTCAACAGGTGAAGCTGCTTATGCTATATTTAAGATCGTCTCGTAG

Protein Analysis

275

Amino Acids

30.74

Weight (kDa)

5.41

Isoelectric Point (pI)

25.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 273 1.5e-54 Legume lectin domain
Lectin_L-type_dom PF18483 64 - 266 5.7e-11 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 567
Acc65I GGTACC 1 cut(s) 701
AccB1I GGYRCC 1 cut(s) 701
AccI GTMKAC 1 cut(s) 531
AccII CGCG 1 cut(s) 583
AccIII TCCGGA 1 cut(s) 636
AciI CCGC 3 cut(s) 202, 426, 583
AclWI GGATC 2 cut(s) 647, 765
AcsI RAATTY 4 cut(s) 133, 194, 316, 479
AcyI GRCGYC 1 cut(s) 564
AfaI GTAC 3 cut(s) 257, 461, 703
AfiI CCNNNNNNNGG 3 cut(s) 469, 597, 602
AgsI TTSAA 4 cut(s) 53, 493, 577, 786
AjnI CCWGG 1 cut(s) 251
AleI CACNNNNGTG 1 cut(s) 18
AluBI AGCT 4 cut(s) 120, 216, 717, 797
AluI AGCT 4 cut(s) 120, 216, 717, 797
Alw26I GTCTC 1 cut(s) 168
AlwI GGATC 2 cut(s) 647, 765
Ama87I CYCGRG 1 cut(s) 165
Aor13HI TCCGGA 1 cut(s) 636
AoxI GGCC 1 cut(s) 439
ApeKI GCWGC 1 cut(s) 797
ApoI RAATTY 4 cut(s) 133, 194, 316, 479
Asp700I GAANNNNTTC 1 cut(s) 507
Asp718I GGTACC 1 cut(s) 701
AspLEI GCGC 2 cut(s) 340, 397
AspS9I GGNCC 1 cut(s) 405
AsuHPI GGTGA 5 cut(s) 32, 199, 301, 383, 803
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 1 cut(s) 405
BanI GGYRCC 1 cut(s) 701
BbvI GCAGC 1 cut(s) 784
BccI CCATC 2 cut(s) 368, 547
BciT130I CCWGG 1 cut(s) 253
BcoDI GTCTC 1 cut(s) 168
BfaI CTAG 2 cut(s) 380, 654
BfoI RGCGCY 1 cut(s) 398
BisI GCNGC 2 cut(s) 427, 798
BlsI GCNGC 2 cut(s) 428, 799
Bme1390I CCNGG 1 cut(s) 253
Bme18I GGWCC 1 cut(s) 405
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 1 cut(s) 405
BmiI GGNNCC 1 cut(s) 703
BmrFI CCNGG 1 cut(s) 253
BmsI GCATC 1 cut(s) 337
BsaHI GRCGYC 1 cut(s) 564
BsaJI CCNNGG 1 cut(s) 596
BsaWI WCCGGW 4 cut(s) 17, 36, 636, 754
Bsc4I CCNNNNNNNGG 3 cut(s) 469, 597, 602
Bse1I ACTGG 1 cut(s) 295
BseAI TCCGGA 1 cut(s) 636
BseBI CCWGG 1 cut(s) 253
BseDI CCNNGG 1 cut(s) 596
BseGI GGATG 1 cut(s) 539
BseLI CCNNNNNNNGG 3 cut(s) 469, 597, 602
BseMII CTCAG 1 cut(s) 435
BseNI ACTGG 1 cut(s) 295
BseXI GCAGC 1 cut(s) 784
Bsh1236I CGCG 1 cut(s) 583
Bsh1285I CGRYCG 1 cut(s) 233
BshFI GGCC 1 cut(s) 441
BshNI GGYRCC 1 cut(s) 701
BsiEI CGRYCG 1 cut(s) 233
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 4 cut(s) 18, 37, 637, 755
BslFI GGGAC 1 cut(s) 578
BslI CCNNNNNNNGG 3 cut(s) 469, 597, 602
BsmAI GTCTC 1 cut(s) 168
BsmBI CGTCTC 1 cut(s) 168
BsmFI GGGAC 1 cut(s) 578
BsnI GGCC 1 cut(s) 441
BsoBI CYCGRG 1 cut(s) 165
Bsp13I TCCGGA 1 cut(s) 636
Bsp143I GATC 6 cut(s) 84, 547, 639, 736, 757, 816
BspACI CCGC 3 cut(s) 202, 426, 583
BspANI GGCC 1 cut(s) 441
BspCNI CTCAG 1 cut(s) 434
BspEI TCCGGA 1 cut(s) 636
BspFNI CGCG 1 cut(s) 583
BspLI GGNNCC 1 cut(s) 703
BspPI GGATC 2 cut(s) 647, 765
BspT107I GGYRCC 1 cut(s) 701
BsrI ACTGG 1 cut(s) 295
BssECI CCNNGG 1 cut(s) 596
BssMI GATC 6 cut(s) 84, 547, 639, 736, 757, 816
BssNI GRCGYC 1 cut(s) 564
BssT1I CCWWGG 1 cut(s) 596
Bst2UI CCWGG 1 cut(s) 253
Bst4CI ACNGT 5 cut(s) 75, 529, 592, 650, 733
Bst6I CTCTTC 1 cut(s) 98
BstACI GRCGYC 1 cut(s) 564
BstDEI CTNAG 5 cut(s) 68, 116, 391, 421, 668
BstF5I GGATG 1 cut(s) 539
BstFNI CGCG 1 cut(s) 583
BstH2I RGCGCY 1 cut(s) 398
BstHHI GCGC 2 cut(s) 340, 397
BstKTI GATC 6 cut(s) 87, 550, 642, 739, 760, 819
BstMAI GTCTC 1 cut(s) 168
BstMBI GATC 6 cut(s) 84, 547, 639, 736, 757, 816
BstMCI CGRYCG 1 cut(s) 233
BstMWI GCNNNNNNNGC 2 cut(s) 271, 803
BstNI CCWGG 1 cut(s) 253
BstSCI CCNGG 1 cut(s) 251
BstUI CGCG 1 cut(s) 583
BstV1I GCAGC 1 cut(s) 784
BsuRI GGCC 1 cut(s) 441
BtsCI GGATG 1 cut(s) 539
BtsIMutI CAGTG 1 cut(s) 288
CfoI GCGC 2 cut(s) 340, 397
Cfr13I GGNCC 1 cut(s) 405
CseI GACGC 1 cut(s) 185
Csp6I GTAC 3 cut(s) 256, 460, 702
CviAII CATG 3 cut(s) 25, 360, 551
CviQI GTAC 3 cut(s) 256, 460, 702
DdeI CTNAG 5 cut(s) 68, 116, 391, 421, 668
DpnI GATC 6 cut(s) 86, 549, 641, 738, 759, 818
DpnII GATC 6 cut(s) 84, 547, 639, 736, 757, 816
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
EciI GGCGGA 1 cut(s) 191
Eco130I CCWWGG 1 cut(s) 596
Eco32I GATATC 1 cut(s) 487
Eco47I GGWCC 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 165
EcoRII CCWGG 1 cut(s) 251
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 1 cut(s) 596
ErhI CCWWGG 1 cut(s) 596
Esp3I CGTCTC 1 cut(s) 168
FaeI CATG 3 cut(s) 28, 363, 554
FaiI YATR 8 cut(s) 26, 161, 183, 336, 361, 552, 804, 809
FalI AAGNNNNNCTT 4 cut(s) 109, 141, 734, 766
FaqI GGGAC 1 cut(s) 578
FatI CATG 3 cut(s) 24, 359, 550
FblI GTMKAC 1 cut(s) 531
Fnu4HI GCNGC 2 cut(s) 427, 798
FokI GGATG 1 cut(s) 526
Fsp4HI GCNGC 2 cut(s) 427, 798
FspBI CTAG 2 cut(s) 380, 654
GlaI GCGC 2 cut(s) 339, 396
GluI GCNGC 2 cut(s) 427, 798
HaeII RGCGCY 1 cut(s) 398
HaeIII GGCC 1 cut(s) 441
HapII CCGG 4 cut(s) 18, 37, 637, 755
HgaI GACGC 1 cut(s) 185
HhaI GCGC 2 cut(s) 340, 397
Hin1I GRCGYC 1 cut(s) 564
Hin1II CATG 3 cut(s) 28, 363, 554
Hin6I GCGC 2 cut(s) 338, 395
HinP1I GCGC 2 cut(s) 338, 395
HincII GTYRAC 2 cut(s) 532, 568
HindII GTYRAC 2 cut(s) 532, 568
HindIII AAGCTT 1 cut(s) 118
HpaII CCGG 4 cut(s) 18, 37, 637, 755
HphI GGTGA 5 cut(s) 32, 199, 301, 383, 803
Hpy166II GTNNAC 2 cut(s) 532, 568
Hpy188I TCNGA 3 cut(s) 278, 409, 544
Hpy188III TCNNGA 6 cut(s) 82, 130, 143, 167, 493, 637
Hpy8I GTNNAC 2 cut(s) 532, 568
Hpy99I CGWCG 3 cut(s) 533, 536, 566
HpyAV CCTTC 6 cut(s) 68, 111, 164, 277, 394, 688
HpyCH4III ACNGT 5 cut(s) 75, 529, 592, 650, 733
HpyCH4IV ACGT 1 cut(s) 564
HpyCH4V TGCA 2 cut(s) 65, 107
HpyF10VI GCNNNNNNNGC 2 cut(s) 271, 803
HpyF3I CTNAG 5 cut(s) 68, 116, 391, 421, 668
HpySE526I ACGT 1 cut(s) 564
Hsp92I GRCGYC 1 cut(s) 564
Hsp92II CATG 3 cut(s) 28, 363, 554
HspAI GCGC 2 cut(s) 338, 395
Kpn2I TCCGGA 1 cut(s) 636
KpnI GGTACC 1 cut(s) 705
Kzo9I GATC 6 cut(s) 84, 547, 639, 736, 757, 816
LmnI GCTCC 1 cut(s) 279
Lsp1109I GCAGC 1 cut(s) 784
LweI GCATC 1 cut(s) 337
MaeI CTAG 2 cut(s) 380, 654
MaeII ACGT 1 cut(s) 564
MaeIII GTNAC 2 cut(s) 20, 644
MalI GATC 6 cut(s) 86, 549, 641, 738, 759, 818
MboI GATC 6 cut(s) 84, 547, 639, 736, 757, 816
MboII GAAGA 4 cut(s) 85, 379, 481, 557
MluCI AATT 7 cut(s) 53, 133, 194, 240, 316, 352, 479
MnlI CCTC 2 cut(s) 215, 452
MroI TCCGGA 1 cut(s) 636
MroXI GAANNNNTTC 1 cut(s) 507
MseI TTAA 3 cut(s) 138, 356, 813
MslI CAYNNNNRTG 1 cut(s) 18
MspI CCGG 4 cut(s) 18, 37, 637, 755
MspR9I CCNGG 1 cut(s) 253
MvaI CCWGG 1 cut(s) 253
MvnI CGCG 1 cut(s) 583
MwoI GCNNNNNNNGC 2 cut(s) 271, 803
NdeII GATC 6 cut(s) 84, 547, 639, 736, 757, 816
NlaIII CATG 3 cut(s) 28, 363, 554
NlaIV GGNNCC 1 cut(s) 703
NmeAIII GCCGAG 2 cut(s) 417, 758
NmuCI GTSAC 1 cut(s) 20
OliI CACNNNNGTG 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 165
PcsI WCGNNNNNNNCGW 1 cut(s) 540
PdmI GAANNNNTTC 1 cut(s) 507
PkrI GCNGC 2 cut(s) 428, 799
Psp6I CCWGG 1 cut(s) 251
PspGI CCWGG 1 cut(s) 251
PspN4I GGNNCC 1 cut(s) 703
PspPI GGNCC 1 cut(s) 405
RsaI GTAC 3 cut(s) 257, 461, 703
RsaNI GTAC 3 cut(s) 256, 460, 702
RseI CAYNNNNRTG 1 cut(s) 18
SalI GTCGAC 1 cut(s) 530
SaqAI TTAA 3 cut(s) 138, 356, 813
SatI GCNGC 2 cut(s) 427, 798
Sau3AI GATC 6 cut(s) 84, 547, 639, 736, 757, 816
Sau96I GGNCC 1 cut(s) 405
ScrFI CCNGG 1 cut(s) 253
SetI ASST 8 cut(s) 122, 218, 257, 407, 567, 719, 793, 799
SfaNI GCATC 1 cut(s) 337
Sfr274I CTCGAG 1 cut(s) 165
SgrDI CGTCGACG 1 cut(s) 530
SinI GGWCC 1 cut(s) 405
SlaI CTCGAG 1 cut(s) 165
SmiMI CAYNNNNRTG 1 cut(s) 18
SmlI CTYRAG 1 cut(s) 165
SmoI CTYRAG 1 cut(s) 165
Sse9I AATT 7 cut(s) 53, 133, 194, 240, 316, 352, 479
SsiI CCGC 3 cut(s) 202, 426, 583
SspMI CTAG 2 cut(s) 380, 654
StyD4I CCNGG 1 cut(s) 251
StyI CCWWGG 1 cut(s) 596
TaaI ACNGT 5 cut(s) 75, 529, 592, 650, 733
TaiI ACGT 1 cut(s) 567
TaqI TCGA 4 cut(s) 166, 247, 531, 561
TaqII GACCGA 1 cut(s) 247
TasI AATT 7 cut(s) 53, 133, 194, 240, 316, 352, 479
TauI GCSGC 1 cut(s) 429
Tru1I TTAA 3 cut(s) 138, 356, 813
Tru9I TTAA 3 cut(s) 138, 356, 813
TscAI CASTG 1 cut(s) 295
TseFI GTSAC 1 cut(s) 20
TseI GCWGC 1 cut(s) 797
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 2 cut(s) 537, 710
TspRI CASTG 1 cut(s) 295
VpaK11BI GGWCC 1 cut(s) 405
XapI RAATTY 4 cut(s) 133, 194, 316, 479
XcmI CCANNNNNNNNNTGG 1 cut(s) 233
XhoI CTCGAG 1 cut(s) 165
XmiI GTMKAC 1 cut(s) 531
XmnI GAANNNNTTC 1 cut(s) 507
XspI CTAG 2 cut(s) 380, 654
ZraI GACGTC 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.