pycom03g18050

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
19107535 .. 19109652
2118 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g18050.1

Sequence Viewer

Length: 2118 bp
ATGGTTGTCTCACCAAAGCAGCTCCAATTCCTTCTTCTTCTGTCGTTTCAATTATTTTCTTGTGTATTTCCATTATCTTTCAACTTCTCCACCTTTCCAAATGGCATCAAAAACTTATCTCTCGAGGGAGATGCTTACATCGACGGCAAATATCTTCGACTTACCAAAAGCGCTGTTGACGACGTAAAGGACCAAAGTGTTGGTCGAGCCACCTACAGCCAACCCTTCCTCCTCCGAGACAAGGTCACGGGAAAGCTTGCCGATTTCACAACAAACTTCACATTTGTCATCGATTCCAGAGGCAAGACACCCTATGAGGACGGACTCGCCTTCTTTTTGGCGCCAAATGGATCCTTACTCAACAAGACAATAGGCAGAGGCGGCAGTCTAGGACTCCCCGTGGACACTTCTCCCCAAGTGTCAAAAATTCAGTACCCTTTTTGGGCGGTGGAGCTTGATATCTACCGGAATGATGTGACATCTGTGGAAGATCCTGCCGGAGATCATGTCGGAGTAGACATCAACTCTGTGAAGTCTAAGATGACCGAATCATGGAATGGTAGTATTACAAACGGACGAGTCAATAGTGTTGGGATTAGTTATGATTCTGCATCAAAGCATGTTGGTATTGTTTTCACAAGTTATGTGAAAGATGTTCAAGTGATGAAGTATATGGATTGCAGGGTTGATTTGAATGAAATCATCCAGGGTTGGGTCGTTGTTGGGTTCTCCGCCACAACAGGTTCTCTGACTGCTGTGAACAAGATCCAATCATGGAGTTTTAATTCGTTTCAACTGCGTGAAGAGAATGAAACGAAGAACATGCCAGTGGTTCCTGAGCCGAGCCCCATCGTTGATCCCAAGTCAGGAAATGGGGTCAACGTAGGACTAATTGTTGGTTTGGGTGCTGGTGGGATTGCTTTCTTGGTTGGTGGGTTGGGTTTGGTTTGGTTTTTGATTTGGAAGAAGAGGGGAGGTAGTTCAAAAGATGGAATGTTTAATGACTGGATCGATGAGGAGTTCCAAAAGGGAACAGGCCCCAAGAAGTTTTCGTACGGAACATTGGCTAGATCAACAAGTAATTTTGATGAAAGAGAGAAGCTTGGAGAGGGAGGGTTTGGTGGAGTTTATCGAGGCTTCATAAAAGACTTGAACGCGTACGTTGCTGTTAAGAGGATATCAAGCAGGTCTAGACAGGGGATGAAGGAGTATGCAGCAGAAGTAAGGATCATCAGCCGACTAAGGCATCGGAATCTGGTGCAACTCATTGGTTGGTGCCATGAAAAAGGAGAACTCTTACTTGTGTATGAGTTCATGTCCAACGGCAGCTTGGATTCCCATTTGTTCAAAGGGAAATCCTTGTTAGCTTGGGAGGCAAGAAACAAAATTGTTCAAGGCTTGGCATCCGGGTTGTTGTATCTGCACGAAGAATGGGAACAATGTGTGCTGCACAGGGATATCAAATCCAGCAATATCATGTTGGACTCAAATTTAAACGCAAAACTTGGGGATTTCGGGTTAGCTCGGCTTGTTGACCATGGAAAACAATCACAAACAACAGTTCTGGCCGGAACTATGGGCTACATGGCTCCTGAATGTCTTACCACAGGAAAGGCTAGCAAGGAAACAGATGTCTACAGCTTTGGAGTTGTTGCTTTGGAGATAGCTTGTGGGCGAAAACCCATTGATCCCAATTCGGAAAGTAGAAAAACGAATATGGCGGAGTGGGTTTGGGAGCTTTATGGACAAGGGAAAGTCATTGAAGCAGCTGACCCTAAATTGTGTGGAGAGTTTGATGAGAAACAAATGGAGTGTTTGTTGGTTGTTGGGTTGTGGTGTGTTCATCCGGATTACACGATCAGGCCTTCGATACAACAAACGATTCAAGTGCTTAATTTTGAAGTTCCATTACCTATTCTCCCGTCGAAGATGCCGGTGGCTAGCTACTCTTCACCTCCGGTAACATTGTCAATTTTGTCTGCTGATACTACAGATTTGGAAAGGGGTGAAACTGATTCTTCAGGCTATCGTTACAACACCAAATCCTCACAGTTCACCCAATCTTCTGCATCAAATTCTTCTTTATCAGCACAGTTTAGTACACAAAATAAATTTTAA

Protein Analysis

706

Amino Acids

77.77

Weight (kDa)

6.55

Isoelectric Point (pI)

34.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 25 - 274 1.2e-55 Legume lectin domain
Lectin_L-type_dom PF18483 41 - 257 1e-08 Legume lectin beta-barrel domain
Pkinase PF00069 363 - 629 2.2e-52 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 572 5.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1176
AccB1I GGYRCC 2 cut(s) 340, 1275
AccI GTMKAC 2 cut(s) 516, 1635
AccII CGCG 1 cut(s) 1157
AccIII TCCGGA 1 cut(s) 1846
AciI CCGC 4 cut(s) 381, 446, 732, 1721
AclWI GGATC 8 cut(s) 345, 358, 485, 760, 851, 1016, 1235, 1682
AcoI YGGCCR 1 cut(s) 1566
AcsI RAATTY 4 cut(s) 426, 1489, 2074, 2111
AcuI CTGAAG 1 cut(s) 2004
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 4 cut(s) 434, 1055, 1160, 2101
AfeI AGCGCT 1 cut(s) 172
AfiI CCNNNNNNNGG 5 cut(s) 241, 442, 552, 712, 866
AflIII ACRYGT 1 cut(s) 1155
AjnI CCWGG 1 cut(s) 705
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
Alw26I GTCTC 2 cut(s) 13, 231
AlwI GGATC 8 cut(s) 345, 358, 485, 760, 851, 1016, 1235, 1682
Ama87I CYCGRG 1 cut(s) 122
Aor13HI TCCGGA 1 cut(s) 1846
Aor51HI AGCGCT 1 cut(s) 172
AoxI GGCC 3 cut(s) 1036, 1566, 1862
ApeKI GCWGC 5 cut(s) 19, 1214, 1326, 1447, 1766
ApoI RAATTY 4 cut(s) 426, 1489, 2074, 2111
ArsI GACNNNNNNTTYG 2 cut(s) 187, 219
AspLEI GCGC 2 cut(s) 173, 343
AspS9I GGNCC 2 cut(s) 190, 1037
AsuC2I CCSGG 1 cut(s) 1408
AsuHPI GGTGA 4 cut(s) 3, 1944, 2018, 2047
AsuNHI GCTAGC 2 cut(s) 1616, 1940
AvaI CYCGRG 1 cut(s) 122
AvaII GGWCC 1 cut(s) 190
BamHI GGATCC 1 cut(s) 350
BanI GGYRCC 2 cut(s) 340, 1275
BanII GRGCYC 1 cut(s) 848
BarI GAAGNNNNNNTAC 4 cut(s) 1037, 1069, 1893, 1925
BbvI GCAGC 5 cut(s) 31, 1226, 1338, 1434, 1778
BccI CCATC 2 cut(s) 857, 983
BceAI ACGGC 2 cut(s) 160, 1339
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 805, 839, 1870, 1904
BciT130I CCWGG 1 cut(s) 707
BcnI CCSGG 1 cut(s) 1408
BcoDI GTCTC 2 cut(s) 13, 231
BfaI CTAG 5 cut(s) 389, 1068, 1191, 1617, 1941
BfmI CTRYAG 3 cut(s) 214, 1636, 1989
BfoI RGCGCY 2 cut(s) 174, 344
BfuAI ACCTGC 1 cut(s) 1176
BisI GCNGC 6 cut(s) 20, 382, 1215, 1327, 1448, 1767
BlsI GCNGC 6 cut(s) 21, 383, 1216, 1328, 1449, 1768
Bme1390I CCNGG 2 cut(s) 707, 1408
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 122
BmgT120I GGNCC 2 cut(s) 190, 1037
BmiI GGNNCC 6 cut(s) 342, 352, 834, 1039, 1277, 1590
BmrFI CCNGG 2 cut(s) 707, 1408
BmsI GCATC 7 cut(s) 114, 121, 620, 1255, 1412, 1920, 2078
BmtI GCTAGC 2 cut(s) 1620, 1944
Bpu10I CCTNAGC 1 cut(s) 837
BpuMI CCSGG 1 cut(s) 1408
Bsa29I ATCGAT 2 cut(s) 291, 1011
BsaHI GRCGYC 1 cut(s) 341
BsaJI CCNNGG 3 cut(s) 399, 706, 1537
BsaWI WCCGGW 3 cut(s) 465, 1846, 1957
BsaXI ACNNNNNCTCC 8 cut(s) 213, 243, 492, 522, 1802, 1832, 1902, 1932
Bsc4I CCNNNNNNNGG 5 cut(s) 241, 442, 552, 712, 866
Bse118I RCCGGY 1 cut(s) 1933
Bse1I ACTGG 2 cut(s) 827, 1010
BseAI TCCGGA 1 cut(s) 1846
BseBI CCWGG 1 cut(s) 707
BseCI ATCGAT 2 cut(s) 291, 1011
BseDI CCNNGG 3 cut(s) 399, 706, 1537
BseGI GGATG 4 cut(s) 702, 1206, 1403, 1843
BseLI CCNNNNNNNGG 5 cut(s) 241, 442, 552, 712, 866
BseMII CTCAG 1 cut(s) 828
BseNI ACTGG 2 cut(s) 827, 1010
BseRI GAGGAG 2 cut(s) 221, 1031
BseXI GCAGC 5 cut(s) 31, 1226, 1338, 1434, 1778
BsgI GTGCAG 2 cut(s) 1406, 1433
Bsh1236I CGCG 1 cut(s) 1157
BshFI GGCC 3 cut(s) 1038, 1568, 1864
BshNI GGYRCC 2 cut(s) 340, 1275
BshVI ATCGAT 2 cut(s) 291, 1011
BsiHKCI CYCGRG 1 cut(s) 122
BsiSI CCGG 7 cut(s) 466, 498, 1407, 1569, 1847, 1934, 1958
BsiWI CGTACG 2 cut(s) 1053, 1158
BslI CCNNNNNNNGG 5 cut(s) 241, 442, 552, 712, 866
BsmAI GTCTC 2 cut(s) 13, 231
BsnI GGCC 3 cut(s) 1038, 1568, 1864
BsoBI CYCGRG 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 848
Bsp13I TCCGGA 1 cut(s) 1846
Bsp19I CCATGG 1 cut(s) 1537
BspACI CCGC 4 cut(s) 381, 446, 732, 1721
BspANI GGCC 3 cut(s) 1038, 1568, 1864
BspCNI CTCAG 1 cut(s) 829
BspDI ATCGAT 2 cut(s) 291, 1011
BspEI TCCGGA 1 cut(s) 1846
BspFNI CGCG 1 cut(s) 1157
BspLI GGNNCC 6 cut(s) 342, 352, 834, 1039, 1277, 1590
BspMI ACCTGC 1 cut(s) 1176
BspOI GCTAGC 2 cut(s) 1620, 1944
BspPI GGATC 8 cut(s) 345, 358, 485, 760, 851, 1016, 1235, 1682
BspT107I GGYRCC 2 cut(s) 340, 1275
BsrFI RCCGGY 1 cut(s) 1933
BsrI ACTGG 2 cut(s) 827, 1010
BssAI RCCGGY 1 cut(s) 1933
BssECI CCNNGG 3 cut(s) 399, 706, 1537
BssNI GRCGYC 1 cut(s) 341
BssT1I CCWWGG 1 cut(s) 1537
Bst2UI CCWGG 1 cut(s) 707
Bst4CI ACNGT 3 cut(s) 1561, 2052, 2094
Bst6I CTCTTC 3 cut(s) 798, 962, 1954
BstACI GRCGYC 1 cut(s) 341
BstC8I GCNNGC 3 cut(s) 258, 1618, 1942
BstDEI CTNAG 3 cut(s) 537, 837, 1241
BstDSI CCRYGG 2 cut(s) 399, 1537
BstF5I GGATG 4 cut(s) 702, 1206, 1403, 1843
BstFNI CGCG 1 cut(s) 1157
BstH2I RGCGCY 2 cut(s) 174, 344
BstHHI GCGC 2 cut(s) 173, 343
BstMAI GTCTC 2 cut(s) 13, 231
BstMWI GCNNNNNNNGC 3 cut(s) 381, 1163, 1373
BstNI CCWGG 1 cut(s) 707
BstNSI RCATGY 2 cut(s) 623, 826
BstSCI CCNGG 2 cut(s) 705, 1406
BstSFI CTRYAG 3 cut(s) 214, 1636, 1989
BstUI CGCG 1 cut(s) 1157
BstV1I GCAGC 5 cut(s) 31, 1226, 1338, 1434, 1778
BstX2I RGATCY 3 cut(s) 350, 490, 765
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 3 cut(s) 350, 490, 765
Bsu15I ATCGAT 2 cut(s) 291, 1011
BsuRI GGCC 3 cut(s) 1038, 1568, 1864
BsuTUI ATCGAT 2 cut(s) 291, 1011
BtgI CCRYGG 2 cut(s) 399, 1537
BtsCI GGATG 4 cut(s) 702, 1206, 1403, 1843
BtsIMutI CAGTG 1 cut(s) 834
BveI ACCTGC 1 cut(s) 1176
Cac8I GCNNGC 3 cut(s) 258, 1618, 1942
CfoI GCGC 2 cut(s) 173, 343
Cfr10I RCCGGY 1 cut(s) 1933
Cfr13I GGNCC 2 cut(s) 190, 1037
ClaI ATCGAT 2 cut(s) 291, 1011
Csp6I GTAC 4 cut(s) 433, 1054, 1159, 2100
CviQI GTAC 4 cut(s) 433, 1054, 1159, 2100
DdeI CTNAG 3 cut(s) 537, 837, 1241
DinI GGCGCC 1 cut(s) 342
DraI TTTAAA 1 cut(s) 1494
EaeI YGGCCR 1 cut(s) 1566
Eam1104I CTCTTC 3 cut(s) 798, 962, 1954
EarI CTCTTC 3 cut(s) 798, 962, 1954
EciI GGCGGA 2 cut(s) 721, 1736
Eco130I CCWWGG 1 cut(s) 1537
Eco147I AGGCCT 1 cut(s) 1864
Eco24I GRGCYC 1 cut(s) 848
Eco32I GATATC 3 cut(s) 460, 1179, 1459
Eco47I GGWCC 1 cut(s) 190
Eco47III AGCGCT 1 cut(s) 172
Eco57I CTGAAG 1 cut(s) 2004
Eco88I CYCGRG 1 cut(s) 122
EcoO109I RGGNCCY 1 cut(s) 1037
EcoRII CCWGG 1 cut(s) 705
EcoRV GATATC 3 cut(s) 460, 1179, 1459
EcoT14I CCWWGG 1 cut(s) 1537
EcoT38I GRGCYC 1 cut(s) 848
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 1537
FblI GTMKAC 2 cut(s) 516, 1635
Fnu4HI GCNGC 6 cut(s) 20, 382, 1215, 1327, 1448, 1767
FokI GGATG 4 cut(s) 689, 1213, 1390, 1830
FriOI GRGCYC 1 cut(s) 848
Fsp4HI GCNGC 6 cut(s) 20, 382, 1215, 1327, 1448, 1767
FspBI CTAG 5 cut(s) 389, 1068, 1191, 1617, 1941
GlaI GCGC 2 cut(s) 172, 342
GluI GCNGC 6 cut(s) 20, 382, 1215, 1327, 1448, 1767
HaeII RGCGCY 2 cut(s) 174, 344
HaeIII GGCC 3 cut(s) 1038, 1568, 1864
HapII CCGG 7 cut(s) 466, 498, 1407, 1569, 1847, 1934, 1958
HhaI GCGC 2 cut(s) 173, 343
Hin1I GRCGYC 1 cut(s) 341
Hin6I GCGC 2 cut(s) 171, 341
HinP1I GCGC 2 cut(s) 171, 341
HincII GTYRAC 3 cut(s) 178, 880, 1534
HindII GTYRAC 3 cut(s) 178, 880, 1534
HindIII AAGCTT 2 cut(s) 254, 1100
HpaII CCGG 7 cut(s) 466, 498, 1407, 1569, 1847, 1934, 1958
HphI GGTGA 4 cut(s) 3, 1944, 2018, 2047
Hpy166II GTNNAC 9 cut(s) 178, 403, 517, 760, 880, 1534, 1636, 2055, 2102
Hpy188I TCNGA 5 cut(s) 236, 512, 750, 1251, 1699
Hpy188III TCNNGA 7 cut(s) 122, 297, 836, 867, 1191, 1592, 1847
Hpy8I GTNNAC 9 cut(s) 178, 403, 517, 760, 880, 1534, 1636, 2055, 2102
Hpy99I CGWCG 3 cut(s) 146, 185, 1927
HpyAV CCTTC 5 cut(s) 41, 235, 340, 1198, 1875
HpyCH4III ACNGT 3 cut(s) 1561, 2052, 2094
HpyCH4IV ACGT 3 cut(s) 183, 882, 1161
HpyCH4V TGCA 7 cut(s) 611, 681, 1214, 1261, 1423, 1450, 2069
HpyF10VI GCNNNNNNNGC 3 cut(s) 381, 1163, 1373
HpyF3I CTNAG 3 cut(s) 537, 837, 1241
HpySE526I ACGT 3 cut(s) 183, 882, 1161
Hsp92I GRCGYC 1 cut(s) 341
HspAI GCGC 2 cut(s) 171, 341
KasI GGCGCC 1 cut(s) 340
Kpn2I TCCGGA 1 cut(s) 1846
LmnI GCTCC 4 cut(s) 27, 451, 1594, 1735
Lsp1109I GCAGC 5 cut(s) 31, 1226, 1338, 1434, 1778
LweI GCATC 7 cut(s) 114, 121, 620, 1255, 1412, 1920, 2078
MaeI CTAG 5 cut(s) 389, 1068, 1191, 1617, 1941
MaeII ACGT 3 cut(s) 183, 882, 1161
MaeIII GTNAC 4 cut(s) 244, 475, 1960, 2030
MflI RGATCY 3 cut(s) 350, 490, 765
MhlI GDGCHC 1 cut(s) 848
MluI ACGCGT 1 cut(s) 1155
Mly113I GGCGCC 1 cut(s) 341
MlyI GAGTC 4 cut(s) 318, 387, 588, 1478
MmeI TCCRAC 3 cut(s) 490, 1344, 1461
MroI TCCGGA 1 cut(s) 1846
MseI TTAA 6 cut(s) 783, 999, 1170, 1493, 1893, 2116
MslI CAYNNNNRTG 1 cut(s) 827
MspA1I CMGCKG 1 cut(s) 1769
MspI CCGG 7 cut(s) 466, 498, 1407, 1569, 1847, 1934, 1958
MspR9I CCNGG 2 cut(s) 707, 1408
MvaI CCWGG 1 cut(s) 707
MvnI CGCG 1 cut(s) 1157
MwoI GCNNNNNNNGC 3 cut(s) 381, 1163, 1373
NarI GGCGCC 1 cut(s) 341
NciI CCSGG 1 cut(s) 1408
NcoI CCATGG 1 cut(s) 1537
NheI GCTAGC 2 cut(s) 1616, 1940
NlaIV GGNNCC 6 cut(s) 342, 352, 834, 1039, 1277, 1590
NmeAIII GCCGAG 2 cut(s) 867, 1504
NmuCI GTSAC 2 cut(s) 244, 475
NspI RCATGY 2 cut(s) 623, 826
PaeR7I CTCGAG 1 cut(s) 122
PceI AGGCCT 1 cut(s) 1864
PfeI GAWTC 7 cut(s) 293, 548, 605, 1252, 1334, 1882, 2015
Pfl23II CGTACG 2 cut(s) 1053, 1158
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 6 cut(s) 21, 383, 1216, 1328, 1449, 1768
PleI GAGTC 4 cut(s) 318, 387, 587, 1478
PluTI GGCGCC 1 cut(s) 344
PpsI GAGTC 4 cut(s) 318, 387, 587, 1478
Psp6I CCWGG 1 cut(s) 705
PspGI CCWGG 1 cut(s) 705
PspLI CGTACG 2 cut(s) 1053, 1158
PspN4I GGNNCC 6 cut(s) 342, 352, 834, 1039, 1277, 1590
PspPI GGNCC 2 cut(s) 190, 1037
PsuI RGATCY 3 cut(s) 350, 490, 765
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 1769
RsaI GTAC 4 cut(s) 434, 1055, 1160, 2101
RsaNI GTAC 4 cut(s) 433, 1054, 1159, 2100
RseI CAYNNNNRTG 1 cut(s) 827
SaqAI TTAA 6 cut(s) 783, 999, 1170, 1493, 1893, 2116
SatI GCNGC 6 cut(s) 20, 382, 1215, 1327, 1448, 1767
Sau96I GGNCC 2 cut(s) 190, 1037
SchI GAGTC 4 cut(s) 318, 387, 588, 1478
ScrFI CCNGG 2 cut(s) 707, 1408
SduI GDGCHC 1 cut(s) 848
SfaNI GCATC 7 cut(s) 114, 121, 620, 1255, 1412, 1920, 2078
SfcI CTRYAG 3 cut(s) 214, 1636, 1989
SfoI GGCGCC 1 cut(s) 342
Sfr274I CTCGAG 1 cut(s) 122
SinI GGWCC 1 cut(s) 190
SlaI CTCGAG 1 cut(s) 122
SmiMI CAYNNNNRTG 1 cut(s) 827
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SseBI AGGCCT 1 cut(s) 1864
SsiI CCGC 4 cut(s) 381, 446, 732, 1721
SspDI GGCGCC 1 cut(s) 340
SspMI CTAG 5 cut(s) 389, 1068, 1191, 1617, 1941
StuI AGGCCT 1 cut(s) 1864
StyD4I CCNGG 2 cut(s) 705, 1406
StyI CCWWGG 1 cut(s) 1537
TaaI ACNGT 3 cut(s) 1561, 2052, 2094
TaiI ACGT 3 cut(s) 186, 885, 1164
TaqI TCGA 9 cut(s) 123, 141, 157, 205, 291, 1011, 1132, 1868, 1925
TaqII GACCGA 1 cut(s) 560
TatI WGTACW 1 cut(s) 2099
TauI GCSGC 1 cut(s) 384
TfiI GAWTC 7 cut(s) 293, 548, 605, 1252, 1334, 1882, 2015
Tru1I TTAA 6 cut(s) 783, 999, 1170, 1493, 1893, 2116
Tru9I TTAA 6 cut(s) 783, 999, 1170, 1493, 1893, 2116
TscAI CASTG 1 cut(s) 834
TseFI GTSAC 2 cut(s) 244, 475
TseI GCWGC 5 cut(s) 19, 1214, 1326, 1447, 1766
Tsp45I GTSAC 2 cut(s) 244, 475
TspDTI ATGAA 9 cut(s) 680, 711, 825, 1104, 1129, 1217, 1296, 1303, 1832
TspGWI ACGGA 3 cut(s) 336, 588, 1071
TspRI CASTG 1 cut(s) 834
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 1 cut(s) 190
XapI RAATTY 4 cut(s) 426, 1489, 2074, 2111
XbaI TCTAGA 1 cut(s) 1190
XceI RCATGY 2 cut(s) 623, 826
XcmI CCANNNNNNNNNTGG 1 cut(s) 1327
XhoI CTCGAG 1 cut(s) 122
XmiI GTMKAC 2 cut(s) 516, 1635
XspI CTAG 5 cut(s) 389, 1068, 1191, 1617, 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.