Rroxscaffold_1G00047880

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67759975 .. 67762067
2093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047880.1

Sequence Viewer

Length: 2073 bp
ATGGTTGTCCATAAACAAGTACAATTTCTTCTTCTCTTCACTCTGTTTACCCCTTTCGCAACACCACTAACCTTCAATTTCTCCACCTTCCCCAATGACACCACCTCTTTGTTCATAGAAGGAGATGCTTATACCGACGGCAAACTCCTCCGGCTCACCAAAAGCGCCAGAGAACCTAAAGTGGCTGGCAACGTTGGTCGAGCCACGTACAGCCAACCATTCCTCCTGCGGGGGAAGTCTCCGGAAAACTCAAACTTGCAGACTTCACCACGCACTTTACGCAACAAAACCTATGGCGATGGGTTGGCGTTCTTCCTGGCGCCAAAAGGATCCTTACTCAACAGTGCATTAGGAGGTGGCGGCAAGCTTGGCCTCCCCGTCGCAGACCTTCCGGGTGGGAATGAGTACGCGTTTGTGGCAGTGCAGTTTGATATCTATCAGAATCAGCTGCCAAGCTACATCGACCCCCAATACGATCACGTGGGGGTCGATGTCAACAATCTCAGGTCTAATATTACCATGGCTTGGTCTGGAGATATTCCGAATGCAAAAATCAACAGTGCTTCGGTTAGTTATAACTCTAGCTCAAAAACTCTTAGTGTTGCATACACCACTTTTGTGAATGATACAGCTGGTATCCAAATGCAAGTGATCAGACATCTTAATTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTAATTGTTGGGTTCTCTGCTGCAACCGGTGATAGGATTGCTTTGTCCGAGATCATCTCATGGAATTTCACTTCGACTTCTATCGTTGATGAGATTGTTGATGAGACAGACACTGCACCAGCAACACGGAACCCTGATACAGTTGAACAAAAGTCAATAAATAACAATATACCACGAATTGCTGTGGGGCTAGGTGTTGGTGGAAGTATCTTGGTGGCGGGGTTGGCTTTGGTTTGGTACATCTTTCGGAGGAAGAGGCAAGCACTTAAAAATGATGGACGTTCCATGGTGGTACTCAATGACGAGTTCGAAAGGGGAACAGGCCCCAGGAAGTTTTTGTACAGCGAGTTGGCTAGAGCCACGAGTAATTTTGATGAAGGAGACAAGCTTGGAGAGGGAGGATTTGGTGGAGTCTATAGAGGATTCATAAAAGACTTGAACACATATGTTGCTGTTAAGAGGGTCTCCAAGGGATCCAAACAAGGGCTAAAGGAGTACGCAGCCGAAGTCAGGATCATCGGTCAACTTAGACATCGAAACCTTGTGCAACTCATTGGTTGGTGTCACGAAAACGGAGATCTCCTACTTGTGTATGAGTTCATGCCCCATGGCAGTTTAGATTCTTATTTGTTCAAAGCAGAAGGCTTCTTGAATTGGGAGGTAAGATACAAAATTGCTCTTGGCTTGGCCAGCGGTGTTCTTTATCTACATGAAGGATGTGAACAATGTATACTGCACAGGGATATCAAATCAAGCAATGTTATGTTGGATTTGAATTTCAGCGTGAAACTTGGAGATTTCGGCCTAGCTAGACTTATGGAGCACGAAAAAGGGACGCTAACAACGATTGTGGCTGGAACTAGGGGCTACATGGCTCTTGATTATGTTGTCACAGGCAAGGCTAGCAAGGAGTCAGATGTCTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAGATCCATGGATTTCGATTTGGAAAGTAAGAGGATCAACTTAGTGGAGTGGGTGTGGCAGCTTTATGGAGAAGAGAAACTTATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAGAAACAAATCGAGTGTTTGATGATTGTTGGGCTCTGGTGTGCTCACCCAGACTATAATTTCAGACCTCCAATACTACAAGCGATTCAAGTGCTTAACTTCAAGGAACAATTGCCCATTCTCCCAGCAATCATGCCAATGGCCCCTTCTTTTGCTCGTCCAGTTCGGGCATTGAGTGATACTATTAGTGGTTCTGAAATAGGTCTTACTAAGTCTTCAAATAGTGACAGCACCAATTCCTCAAAGTTGGCTTCATCTTCTGCAAATTATCAGTCATCACCTCTTTGA

Protein Analysis

690

Amino Acids

76.1

Weight (kDa)

6.26

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 265 1.5e-46 Legume lectin domain
Lectin_L-type_dom PF18483 92 - 251 5.2e-07 Legume lectin beta-barrel domain
Pkinase PF00069 359 - 559 1.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 361 - 555 1.4e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 576
AccB1I GGYRCC 1 cut(s) 319
AccB7I CCANNNNNTGG 1 cut(s) 525
AccI GTMKAC 1 cut(s) 1432
AccII CGCG 1 cut(s) 410
AccIII TCCGGA 1 cut(s) 241
AciI CCGC 4 cut(s) 229, 360, 920, 1395
AclI AACGTT 1 cut(s) 192
AclWI GGATC 7 cut(s) 324, 337, 1170, 1183, 1223, 1662, 1706
AcoI YGGCCR 1 cut(s) 1389
AcsI RAATTY 2 cut(s) 766, 1477
AcvI CACGTG 1 cut(s) 481
AcyI GRCGYC 1 cut(s) 320
AfaI GTAC 8 cut(s) 21, 209, 407, 689, 941, 996, 1043, 1199
AfiI CCNNNNNNNGG 5 cut(s) 229, 525, 735, 1185, 1212
AflIII ACRYGT 1 cut(s) 408
AgeI ACCGGT 1 cut(s) 728
AjnI CCWGG 2 cut(s) 315, 1028
AjuI GAANNNNNNNTTGG 2 cut(s) 1915, 1947
AleI CACNNNNGTG 1 cut(s) 617
Alw21I GWGCWC 2 cut(s) 1527, 1831
Alw26I GTCTC 4 cut(s) 243, 800, 1077, 1171
AlwI GGATC 7 cut(s) 324, 337, 1170, 1183, 1223, 1662, 1706
AlwNI CAGNNNCTG 1 cut(s) 815
Aor13HI TCCGGA 1 cut(s) 241
AoxI GGCC 5 cut(s) 370, 1024, 1389, 1504, 1926
ApeKI GCWGC 5 cut(s) 448, 722, 1202, 1723, 1754
ApoI RAATTY 2 cut(s) 766, 1477
ArsI GACNNNNNNTTYG 1 cut(s) 2042
AsiGI ACCGGT 1 cut(s) 728
AspLEI GCGC 2 cut(s) 167, 322
AspS9I GGNCC 2 cut(s) 1025, 1927
AsuC2I CCSGG 1 cut(s) 393
AsuHPI GGTGA 5 cut(s) 148, 258, 743, 1823, 2055
AsuII TTCGAA 1 cut(s) 1011
AsuNHI GCTAGC 1 cut(s) 1604
BalI TGGCCA 1 cut(s) 1391
BamHI GGATCC 2 cut(s) 329, 1175
BanI GGYRCC 1 cut(s) 319
BanII GRGCYC 1 cut(s) 1821
BarI GAAGNNNNNNTAC 4 cut(s) 12, 44, 1025, 1057
BauI CACGAG 1 cut(s) 1063
BbrPI CACGTG 1 cut(s) 481
BbsI GAAGAC 1 cut(s) 1992
Bbv12I GWGCWC 2 cut(s) 1527, 1831
BbvI GCAGC 5 cut(s) 435, 709, 1214, 1735, 1766
BccI CCATC 2 cut(s) 293, 971
BceAI ACGGC 1 cut(s) 154
BcgI CGANNNNNNTGC 2 cut(s) 1858, 1892
BciT130I CCWGG 2 cut(s) 317, 1030
BciVI GTATCC 1 cut(s) 647
BclI TGATCA 1 cut(s) 651
BcnI CCSGG 1 cut(s) 393
BcoDI GTCTC 4 cut(s) 243, 800, 1077, 1171
BfaI CTAG 7 cut(s) 582, 893, 1056, 1508, 1512, 1563, 1605
BfmI CTRYAG 2 cut(s) 1117, 1624
BfoI RGCGCY 2 cut(s) 168, 323
BfuI GTATCC 1 cut(s) 647
BglII AGATCT 1 cut(s) 1279
BisI GCNGC 6 cut(s) 361, 449, 723, 1203, 1724, 1755
BlsI GCNGC 6 cut(s) 362, 450, 724, 1204, 1725, 1756
BmcAI AGTACT 1 cut(s) 689
Bme1390I CCNGG 3 cut(s) 317, 393, 1030
BmgT120I GGNCC 2 cut(s) 1025, 1927
BmiI GGNNCC 6 cut(s) 321, 331, 833, 1027, 1177, 1929
BmrFI CCNGG 3 cut(s) 317, 393, 1030
BmsI GCATC 1 cut(s) 115
BmtI GCTAGC 1 cut(s) 1608
BpiI GAAGAC 1 cut(s) 1992
BplI GAGNNNNNCTC 2 cut(s) 743, 775
BpmI CTGGAG 1 cut(s) 552
Bpu14I TTCGAA 1 cut(s) 1011
BpuMI CCSGG 1 cut(s) 393
BsaAI YACGTR 3 cut(s) 207, 481, 670
BsaBI GATNNNNATC 1 cut(s) 435
BsaHI GRCGYC 1 cut(s) 320
BsaI GGTCTC 1 cut(s) 1171
BsaJI CCNNGG 6 cut(s) 519, 987, 1028, 1170, 1309, 1671
BsaWI WCCGGW 2 cut(s) 241, 728
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 1703, 1733
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 525, 735, 1185, 1212
Bse118I RCCGGY 1 cut(s) 728
Bse1I ACTGG 1 cut(s) 1946
Bse3DI GCAATG 1 cut(s) 1465
Bse8I GATNNNNATC 1 cut(s) 435
BseAI TCCGGA 1 cut(s) 241
BseBI CCWGG 2 cut(s) 317, 1030
BseDI CCNNGG 6 cut(s) 519, 987, 1028, 1170, 1309, 1671
BseGI GGATG 1 cut(s) 1424
BseJI GATNNNNATC 1 cut(s) 435
BseLI CCNNNNNNNGG 5 cut(s) 229, 525, 735, 1185, 1212
BseMI GCAATG 1 cut(s) 1465
BseMII CTCAG 1 cut(s) 517
BseNI ACTGG 1 cut(s) 1946
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 5 cut(s) 435, 709, 1214, 1735, 1766
BseYI CCCAGC 1 cut(s) 1909
BsgI GTGCAG 3 cut(s) 443, 801, 1421
Bsh1236I CGCG 1 cut(s) 410
BshFI GGCC 5 cut(s) 372, 1026, 1391, 1506, 1928
BshNI GGYRCC 1 cut(s) 319
BshTI ACCGGT 1 cut(s) 728
BsiHKAI GWGCWC 2 cut(s) 1527, 1831
BsiSI CCGG 4 cut(s) 151, 242, 392, 729
BslFI GGGAC 1 cut(s) 1549
BslI CCNNNNNNNGG 5 cut(s) 229, 525, 735, 1185, 1212
BsmAI GTCTC 4 cut(s) 243, 800, 1077, 1171
BsmFI GGGAC 1 cut(s) 1549
BsmI GAATGC 1 cut(s) 550
BsnI GGCC 5 cut(s) 372, 1026, 1391, 1506, 1928
Bso31I GGTCTC 1 cut(s) 1171
Bsp119I TTCGAA 1 cut(s) 1011
Bsp1286I GDGCHC 3 cut(s) 1527, 1821, 1831
Bsp13I TCCGGA 1 cut(s) 241
Bsp1407I TGTACA 1 cut(s) 1041
Bsp19I CCATGG 4 cut(s) 519, 987, 1309, 1671
BspACI CCGC 4 cut(s) 229, 360, 920, 1395
BspANI GGCC 5 cut(s) 372, 1026, 1391, 1506, 1928
BspCNI CTCAG 1 cut(s) 516
BspEI TCCGGA 1 cut(s) 241
BspFNI CGCG 1 cut(s) 410
BspLI GGNNCC 6 cut(s) 321, 331, 833, 1027, 1177, 1929
BspOI GCTAGC 1 cut(s) 1608
BspPI GGATC 7 cut(s) 324, 337, 1170, 1183, 1223, 1662, 1706
BspT104I TTCGAA 1 cut(s) 1011
BspT107I GGYRCC 1 cut(s) 319
BspTNI GGTCTC 1 cut(s) 1171
BsrDI GCAATG 1 cut(s) 1465
BsrFI RCCGGY 1 cut(s) 728
BsrGI TGTACA 1 cut(s) 1041
BsrI ACTGG 1 cut(s) 1946
BssAI RCCGGY 1 cut(s) 728
BssECI CCNNGG 6 cut(s) 519, 987, 1028, 1170, 1309, 1671
BssNAI GTATAC 1 cut(s) 1433
BssNI GRCGYC 1 cut(s) 320
BssSI CACGAG 1 cut(s) 1063
BssT1I CCWWGG 5 cut(s) 519, 987, 1170, 1309, 1671
Bst1107I GTATAC 1 cut(s) 1433
Bst2BI CACGAG 1 cut(s) 1063
Bst2UI CCWGG 2 cut(s) 317, 1030
Bst4CI ACNGT 4 cut(s) 344, 560, 687, 844
Bst6I CTCTTC 3 cut(s) 41, 950, 1731
BstACI GRCGYC 1 cut(s) 320
BstAUI TGTACA 1 cut(s) 1041
BstBAI YACGTR 3 cut(s) 207, 481, 670
BstBI TTCGAA 1 cut(s) 1011
BstC8I GCNNGC 5 cut(s) 187, 365, 963, 1393, 1606
BstDEI CTNAG 5 cut(s) 503, 596, 1229, 1705, 1995
BstDSI CCRYGG 4 cut(s) 519, 987, 1309, 1671
BstF5I GGATG 1 cut(s) 1424
BstFNI CGCG 1 cut(s) 410
BstH2I RGCGCY 2 cut(s) 168, 323
BstHHI GCGC 2 cut(s) 167, 322
BstMAI GTCTC 4 cut(s) 243, 800, 1077, 1171
BstMWI GCNNNNNNNGC 6 cut(s) 279, 369, 416, 926, 1392, 1605
BstNI CCWGG 2 cut(s) 317, 1030
BstSCI CCNGG 3 cut(s) 315, 391, 1028
BstSFI CTRYAG 2 cut(s) 1117, 1624
BstUI CGCG 1 cut(s) 410
BstV1I GCAGC 5 cut(s) 435, 709, 1214, 1735, 1766
BstV2I GAAGAC 1 cut(s) 1992
BstX2I RGATCY 4 cut(s) 329, 1175, 1279, 1667
BstYI RGATCY 4 cut(s) 329, 1175, 1279, 1667
BstZ17I GTATAC 1 cut(s) 1433
BsuI GTATCC 1 cut(s) 647
BsuRI GGCC 5 cut(s) 372, 1026, 1391, 1506, 1928
BtgI CCRYGG 4 cut(s) 519, 987, 1309, 1671
BtgZI GCGATG 1 cut(s) 312
BtsCI GGATG 1 cut(s) 1424
BtsI GCAGTG 2 cut(s) 426, 813
BtsIMutI CAGTG 4 cut(s) 349, 426, 565, 813
Cac8I GCNNGC 5 cut(s) 187, 365, 963, 1393, 1606
CaiI CAGNNNCTG 1 cut(s) 815
CfoI GCGC 2 cut(s) 167, 322
Cfr10I RCCGGY 1 cut(s) 728
Cfr13I GGNCC 2 cut(s) 1025, 1927
CseI GACGC 1 cut(s) 1546
Csp6I GTAC 8 cut(s) 20, 208, 406, 688, 940, 995, 1042, 1198
CspAI ACCGGT 1 cut(s) 728
CspCI CAANNNNNGTGG 2 cut(s) 1533, 1568
CviAII CATG 9 cut(s) 520, 762, 988, 1303, 1310, 1412, 1573, 1672, 1918
CviQI GTAC 8 cut(s) 20, 208, 406, 688, 940, 995, 1042, 1198
DdeI CTNAG 5 cut(s) 503, 596, 1229, 1705, 1995
DinI GGCGCC 1 cut(s) 321
EaeI YGGCCR 1 cut(s) 1389
Eam1104I CTCTTC 3 cut(s) 41, 950, 1731
EarI CTCTTC 3 cut(s) 41, 950, 1731
Eco130I CCWWGG 5 cut(s) 519, 987, 1170, 1309, 1671
Eco24I GRGCYC 1 cut(s) 1821
Eco31I GGTCTC 1 cut(s) 1171
Eco32I GATATC 2 cut(s) 433, 1447
Eco72I CACGTG 1 cut(s) 481
EcoO109I RGGNCCY 1 cut(s) 1025
EcoRII CCWGG 2 cut(s) 315, 1028
EcoRV GATATC 2 cut(s) 433, 1447
EcoT14I CCWWGG 5 cut(s) 519, 987, 1170, 1309, 1671
EcoT38I GRGCYC 1 cut(s) 1821
EgeI GGCGCC 1 cut(s) 321
EheI GGCGCC 1 cut(s) 321
ErhI CCWWGG 5 cut(s) 519, 987, 1170, 1309, 1671
FaeI CATG 9 cut(s) 523, 765, 991, 1306, 1313, 1415, 1576, 1675, 1921
FalI AAGNNNNNCTT 2 cut(s) 1728, 1760
FaqI GGGAC 1 cut(s) 1549
FatI CATG 9 cut(s) 519, 761, 987, 1302, 1309, 1411, 1572, 1671, 1917
FauI CCCGC 2 cut(s) 222, 913
FauNDI CATATG 1 cut(s) 1147
FbaI TGATCA 1 cut(s) 651
FblI GTMKAC 1 cut(s) 1432
Fnu4HI GCNGC 6 cut(s) 361, 449, 723, 1203, 1724, 1755
FokI GGATG 1 cut(s) 1431
FriOI GRGCYC 1 cut(s) 1821
Fsp4HI GCNGC 6 cut(s) 361, 449, 723, 1203, 1724, 1755
FspBI CTAG 7 cut(s) 582, 893, 1056, 1508, 1512, 1563, 1605
GlaI GCGC 2 cut(s) 166, 321
GluI GCNGC 6 cut(s) 361, 449, 723, 1203, 1724, 1755
GsaI CCCAGC 1 cut(s) 1913
GsuI CTGGAG 1 cut(s) 552
HaeII RGCGCY 2 cut(s) 168, 323
HaeIII GGCC 5 cut(s) 372, 1026, 1391, 1506, 1928
HapII CCGG 4 cut(s) 151, 242, 392, 729
HgaI GACGC 1 cut(s) 1546
HhaI GCGC 2 cut(s) 167, 322
Hin1I GRCGYC 1 cut(s) 320
Hin1II CATG 9 cut(s) 523, 765, 991, 1306, 1313, 1415, 1576, 1675, 1921
Hin6I GCGC 2 cut(s) 165, 320
HinP1I GCGC 2 cut(s) 165, 320
HincII GTYRAC 2 cut(s) 496, 1226
HindII GTYRAC 2 cut(s) 496, 1226
HindIII AAGCTT 2 cut(s) 365, 1088
HinfI GANTC 6 cut(s) 442, 1113, 1125, 1322, 1613, 1870
HpaII CCGG 4 cut(s) 151, 242, 392, 729
HphI GGTGA 5 cut(s) 148, 258, 743, 1823, 2055
Hpy166II GTNNAC 5 cut(s) 48, 496, 1226, 1424, 1433
Hpy188III TCNNGA 6 cut(s) 242, 531, 1213, 1268, 1351, 1580
Hpy8I GTNNAC 5 cut(s) 48, 496, 1226, 1424, 1433
Hpy99I CGWCG 2 cut(s) 140, 383
HpyAV CCTTC 8 cut(s) 82, 97, 113, 398, 1073, 1337, 1409, 1941
HpyCH4III ACNGT 4 cut(s) 344, 560, 687, 844
HpyCH4IV ACGT 5 cut(s) 192, 206, 480, 669, 982
HpyF10VI GCNNNNNNNGC 6 cut(s) 279, 369, 416, 926, 1392, 1605
HpyF3I CTNAG 5 cut(s) 503, 596, 1229, 1705, 1995
HpySE526I ACGT 5 cut(s) 192, 206, 480, 669, 982
Hsp92I GRCGYC 1 cut(s) 320
Hsp92II CATG 9 cut(s) 523, 765, 991, 1306, 1313, 1415, 1576, 1675, 1921
HspAI GCGC 2 cut(s) 165, 320
KasI GGCGCC 1 cut(s) 319
Kpn2I TCCGGA 1 cut(s) 241
Ksp22I TGATCA 1 cut(s) 651
LmnI GCTCC 1 cut(s) 1522
Lsp1109I GCAGC 5 cut(s) 435, 709, 1214, 1735, 1766
LweI GCATC 1 cut(s) 115
MaeI CTAG 7 cut(s) 582, 893, 1056, 1508, 1512, 1563, 1605
MaeII ACGT 5 cut(s) 192, 206, 480, 669, 982
MaeIII GTNAC 3 cut(s) 1265, 1591, 2009
MboII GAAGA 9 cut(s) 20, 23, 28, 304, 967, 1677, 1748, 1992, 2034
MfeI CAATTG 1 cut(s) 1895
MflI RGATCY 4 cut(s) 329, 1175, 1279, 1667
MhlI GDGCHC 3 cut(s) 1527, 1821, 1831
MlsI TGGCCA 1 cut(s) 1391
MluI ACGCGT 1 cut(s) 408
MluNI TGGCCA 1 cut(s) 1391
Mly113I GGCGCC 1 cut(s) 320
MlyI GAGTC 2 cut(s) 1122, 1622
MmeI TCCRAC 1 cut(s) 1449
Mox20I TGGCCA 1 cut(s) 1391
MroI TCCGGA 1 cut(s) 241
MscI TGGCCA 1 cut(s) 1391
MseI TTAA 4 cut(s) 663, 969, 1158, 1881
MslI CAYNNNNRTG 2 cut(s) 617, 1922
Msp20I TGGCCA 1 cut(s) 1391
MspA1I CMGCKG 4 cut(s) 448, 632, 1395, 1757
MspI CCGG 4 cut(s) 151, 242, 392, 729
MspR9I CCNGG 3 cut(s) 317, 393, 1030
MunI CAATTG 1 cut(s) 1895
Mva1269I GAATGC 1 cut(s) 550
MvaI CCWGG 2 cut(s) 317, 1030
MvnI CGCG 1 cut(s) 410
MwoI GCNNNNNNNGC 6 cut(s) 279, 369, 416, 926, 1392, 1605
NarI GGCGCC 1 cut(s) 320
NciI CCSGG 1 cut(s) 393
NcoI CCATGG 4 cut(s) 519, 987, 1309, 1671
NdeI CATATG 1 cut(s) 1147
NheI GCTAGC 1 cut(s) 1604
NlaIII CATG 9 cut(s) 523, 765, 991, 1306, 1313, 1415, 1576, 1675, 1921
NlaIV GGNNCC 6 cut(s) 321, 331, 833, 1027, 1177, 1929
NmuCI GTSAC 3 cut(s) 1265, 1591, 2009
NspV TTCGAA 1 cut(s) 1011
OliI CACNNNNGTG 1 cut(s) 617
PcsI WCGNNNNNNNCGW 2 cut(s) 486, 1544
PctI GAATGC 1 cut(s) 550
PfeI GAWTC 4 cut(s) 442, 1125, 1322, 1870
PflMI CCANNNNNTGG 1 cut(s) 525
PinAI ACCGGT 1 cut(s) 728
PkrI GCNGC 6 cut(s) 362, 450, 724, 1204, 1725, 1756
PleI GAGTC 2 cut(s) 1121, 1621
PluTI GGCGCC 1 cut(s) 323
PmaCI CACGTG 1 cut(s) 481
PmlI CACGTG 1 cut(s) 481
PpsI GAGTC 2 cut(s) 1121, 1621
Ppu21I YACGTR 3 cut(s) 207, 481, 670
PsiI TTATAA 1 cut(s) 576
Psp1406I AACGTT 1 cut(s) 192
Psp6I CCWGG 2 cut(s) 315, 1028
PspCI CACGTG 1 cut(s) 481
PspFI CCCAGC 1 cut(s) 1909
PspGI CCWGG 2 cut(s) 315, 1028
PspN4I GGNNCC 6 cut(s) 321, 331, 833, 1027, 1177, 1929
PspPI GGNCC 2 cut(s) 1025, 1927
PsrI GAACNNNNNNTAC 2 cut(s) 1416, 1448
PstNI CAGNNNCTG 1 cut(s) 815
PsuI RGATCY 4 cut(s) 329, 1175, 1279, 1667
PvuII CAGCTG 3 cut(s) 448, 632, 1757
RsaI GTAC 8 cut(s) 21, 209, 407, 689, 941, 996, 1043, 1199
RsaNI GTAC 8 cut(s) 20, 208, 406, 688, 940, 995, 1042, 1198
RseI CAYNNNNRTG 2 cut(s) 617, 1922
SaqAI TTAA 4 cut(s) 663, 969, 1158, 1881
SatI GCNGC 6 cut(s) 361, 449, 723, 1203, 1724, 1755
Sau96I GGNCC 2 cut(s) 1025, 1927
ScaI AGTACT 1 cut(s) 689
SchI GAGTC 2 cut(s) 1122, 1622
ScrFI CCNGG 3 cut(s) 317, 393, 1030
SduI GDGCHC 3 cut(s) 1527, 1821, 1831
SfaNI GCATC 1 cut(s) 115
SfcI CTRYAG 2 cut(s) 1117, 1624
SfoI GGCGCC 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 1011
SmiMI CAYNNNNRTG 2 cut(s) 617, 1922
SsiI CCGC 4 cut(s) 229, 360, 920, 1395
SspDI GGCGCC 1 cut(s) 319
SspI AATATT 1 cut(s) 514
SspMI CTAG 7 cut(s) 582, 893, 1056, 1508, 1512, 1563, 1605
StyD4I CCNGG 3 cut(s) 315, 391, 1028
StyI CCWWGG 5 cut(s) 519, 987, 1170, 1309, 1671
TaaI ACNGT 4 cut(s) 344, 560, 687, 844
TaiI ACGT 5 cut(s) 195, 209, 483, 672, 985
TaqI TCGA 8 cut(s) 199, 462, 489, 776, 1011, 1237, 1680, 1797
TaqII GACCGA 1 cut(s) 1211
TatI WGTACW 3 cut(s) 19, 687, 1041
TauI GCSGC 1 cut(s) 363
TfiI GAWTC 4 cut(s) 442, 1125, 1322, 1870
Tru1I TTAA 4 cut(s) 663, 969, 1158, 1881
Tru9I TTAA 4 cut(s) 663, 969, 1158, 1881
TscAI CASTG 4 cut(s) 349, 426, 565, 820
TseFI GTSAC 3 cut(s) 1265, 1591, 2009
TseI GCWGC 5 cut(s) 448, 722, 1202, 1723, 1754
Tsp45I GTSAC 3 cut(s) 1265, 1591, 2009
TspDTI ATGAA 6 cut(s) 103, 1092, 1117, 1291, 1428, 2028
TspGWI ACGGA 2 cut(s) 844, 1290
TspRI CASTG 4 cut(s) 349, 426, 565, 820
Van91I CCANNNNNTGG 1 cut(s) 525
XapI RAATTY 2 cut(s) 766, 1477
XmiI GTMKAC 1 cut(s) 1432
XspI CTAG 7 cut(s) 582, 893, 1056, 1508, 1512, 1563, 1605
ZrmI AGTACT 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.