Rroxscaffold_5G00358640

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
38742833 .. 38744809
1977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00358640.1

Sequence Viewer

Length: 1977 bp
ATGTCTGTAAGCAGAAGCAACCAGGCAATCTGCTTATGCAATCTTTGCTTCTTAAGTTTCATAATTTTTTTCCCTCACTTTTCTCATCCACTTTCCTTCAGCATAAATCAATTCAACGGTGCTACAAATGGAGTTGTCTACCAAGGTGATGCCTGGCCTTCGTCGGAAGTGATTGAGCTCACCAACCAAACTTTTAAATACCGTGTCGGACGGGCCATGTATGCCAAGCCTTTGCGCCTATGGGACAGTACTACTGGGTCACTCGCCGACTTCAGTACTAATTTCACTTTCATGATCGACACTGGTAATAGGGAAGTCTTCAGTGATGGAGTTGCCTTTTTCCTATCTCCCGTGGGCTATCAGTTTCCGCCAGACTTTTCAGTTGGTGGTCTAGGACTTTTCAACACCCACGCCAGTCCTCTCAATGCTTCCCAAACCCAAGTTGTAAGCGTGGAGTTTGATACTTGGTGGAACAACGAATGGGATCCACCAGGACGAGTACCTCATATTGGGATCAATCTCAAAGATGTCTCTTCAGTTGTTTCCGCCGATTGGAATGTTAGCATCATCTCGGGGAAGATTGGTAATGCATGGATAACTTACAACGCTACCGCCAACAACCTTACTGTGTTTTGGACGTTCAATGAGAGATTTAACCGAGTGTCTTTGGGGAATGCTTCTTCTCTTACTTACCATGTTGACTTGCGAAAGCTTCTTCCCGAATGGGTTACAATCGGGTTTTCTGCTTCAAGTGGAGAATACTCTGAGCGGCATGTCATAAGTTCTTGGGAATTCACTTCAACTTTGGGAAGAGGCAAAATCAAGCAGAAGAAGAAGACATTCTTGATTCTGGTCATTGCAATTCCTGGCTTCACTCTGATGCTTGGTGTCATCGTATGTTGGTTAGTGGTATCGAGGAAGAGGAGAAACAATAACTCTCAGGATGTGTCCACTGTAAATACAGATCTTGAGAGAGTAACCTTCCCAAAACGATTTGGTTACAAGGAATTAGTTGCTGCTACGAACAACTTTGCAAGCGATAGAAGGCTAGGGCAAGGAGGGTCCGGACAAGTATACAAAGGACTCCTACAAGATCTTGGAGGTTGCACAGTAGCTGTGAAGAGAATCTTTGCAGAATCTGATAAACAATATGAGAAAGTTTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGGAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGCGAGTGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTTGACACCCATCTATTCAGCACTAGAACAACCCTACATTGGGATAACAGGTACAAGATAGCCTTAGGCTTGGCTTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTTCTACATAGGGATATCAAATCAGCTAACATAATGTTGGATAACGACTTCAGCACTAAGCTTGGTGATTTTGGCATTGCTAAGCTCGTGGATCCCCGGTTAAGGACTCAGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCCCCAGAATATGCTAATGAAGGGAGGGCTAGTAAGGAGTCTGACATGTTTAGTTTTGGAATTGTAGCCTTGGAAATTGCATGTGGAAGGAAGACATACCAAGACGGAGAATATCACTTGCCACTTTTCAGTTGGGTTTGGCAGTTGCACCTTGCAGGAAATCTTCTTGATGCAGCTGATGAAAGATTAGAAATGAATTATAATGGAAATGAAATGAAATGCCTGTTGATTGTTGGACTATGGTGTACTCACCGCAACAGCAAGAAGAGACCAAAAGCAGGGCACGTAATGAAGGTTCTTCAGCTTGAAGCACCATTGCCAGAACTTCCAAAGGACATGCATGATCATTCAGTACAGCCTGAACCTCAACAACAAACTCAGGCTGCTTCCTCTCAGATATCGTTAACTTCTTCTAGCCTTGCTACTGTGGGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

658

Amino Acids

73.88

Weight (kDa)

8.18

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 277 8.2e-64 Legume lectin domain
Lectin_L-type_dom PF18483 53 - 260 4.4e-07 Legume lectin beta-barrel domain
Pkinase PF00069 346 - 610 7.8e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 548 8.9e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1740
AccBSI CCGCTC 1 cut(s) 769
AccI GTMKAC 2 cut(s) 138, 1074
AccIII TCCGGA 1 cut(s) 1064
AciI CCGC 6 cut(s) 368, 546, 612, 769, 1189, 1792
AclWI GGATC 5 cut(s) 479, 492, 521, 1481, 1494
AcsI RAATTY 1 cut(s) 791
AcuI CTGAAG 7 cut(s) 82, 256, 304, 519, 1341, 1429, 1823
AfaI GTAC 6 cut(s) 250, 277, 501, 1334, 1786, 1893
AfiI CCNNNNNNNGG 6 cut(s) 509, 552, 1320, 1321, 1497, 1817
AflII CTTAAG 1 cut(s) 52
AflIII ACRYGT 1 cut(s) 1584
AgsI TTSAA 6 cut(s) 115, 403, 643, 750, 801, 1847
AjnI CCWGG 5 cut(s) 21, 152, 490, 865, 1206
AluBI AGCT 8 cut(s) 178, 712, 1115, 1421, 1456, 1480, 1715, 1843
AluI AGCT 8 cut(s) 178, 712, 1115, 1421, 1456, 1480, 1715, 1843
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 2 cut(s) 535, 1801
AlwI GGATC 5 cut(s) 479, 492, 521, 1481, 1494
AlwNI CAGNNNCTG 2 cut(s) 1115, 1139
Ama87I CYCGRG 1 cut(s) 571
Aor13HI TCCGGA 1 cut(s) 1064
AoxI GGCC 3 cut(s) 155, 213, 1539
ApeKI GCWGC 3 cut(s) 1016, 1712, 1922
ApoI RAATTY 1 cut(s) 791
Asp700I GAANNNNTTC 2 cut(s) 839, 1160
AspLEI GCGC 1 cut(s) 237
AspS9I GGNCC 3 cut(s) 213, 1062, 1540
AsuC2I CCSGG 1 cut(s) 1492
AsuHPI GGTGA 4 cut(s) 158, 172, 1472, 1781
AvaI CYCGRG 1 cut(s) 571
AvaII GGWCC 1 cut(s) 1062
AxyI CCTNAGG 1 cut(s) 1345
BaeGI GKGCMC 1 cut(s) 1824
BamHI GGATCC 2 cut(s) 484, 1486
BanII GRGCYC 1 cut(s) 180
BauI CACGAG 1 cut(s) 1481
BbsI GAAGAC 3 cut(s) 310, 842, 1637
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 3 cut(s) 1003, 1724, 1909
BccI CCATC 3 cut(s) 320, 1206, 1299
BciT130I CCWGG 5 cut(s) 23, 154, 492, 867, 1208
BciVI GTATCC 1 cut(s) 1526
BclI TGATCA 1 cut(s) 1882
BcnI CCSGG 1 cut(s) 1492
BcoDI GTCTC 2 cut(s) 535, 1801
BfaI CTAG 5 cut(s) 392, 1049, 1305, 1569, 1953
BfrI CTTAAG 1 cut(s) 52
BfuI GTATCC 1 cut(s) 1526
BglII AGATCT 2 cut(s) 964, 1093
BisI GCNGC 5 cut(s) 770, 1017, 1189, 1713, 1923
BlpI GCTNAGC 1 cut(s) 1476
BlsI GCNGC 5 cut(s) 771, 1018, 1190, 1714, 1924
BmcAI AGTACT 2 cut(s) 250, 277
Bme1390I CCNGG 6 cut(s) 23, 154, 492, 867, 1208, 1492
Bme18I GGWCC 1 cut(s) 1062
BmeT110I CYCGRG 1 cut(s) 571
BmgT120I GGNCC 3 cut(s) 213, 1062, 1540
BmiI GGNNCC 5 cut(s) 486, 1063, 1205, 1488, 1542
BmrFI CCNGG 6 cut(s) 23, 154, 492, 867, 1208, 1492
BmrI ACTGGG 1 cut(s) 264
BmsI GCATC 5 cut(s) 139, 573, 870, 1372, 1699
BmuI ACTGGG 1 cut(s) 264
BpiI GAAGAC 3 cut(s) 310, 842, 1637
Bpu1102I GCTNAGC 1 cut(s) 1476
BpuEI CTTGAG 1 cut(s) 989
BpuMI CCSGG 1 cut(s) 1492
BsaAI YACGTR 1 cut(s) 1825
BsaI GGTCTC 1 cut(s) 1801
BsaJI CCNNGG 4 cut(s) 142, 351, 1490, 1608
BsaWI WCCGGW 1 cut(s) 1064
BsaXI ACNNNNNCTCC 2 cut(s) 1555, 1585
Bsc4I CCNNNNNNNGG 6 cut(s) 509, 552, 1320, 1321, 1497, 1817
Bse1I ACTGG 3 cut(s) 259, 307, 414
Bse21I CCTNAGG 1 cut(s) 1345
Bse3DI GCAATG 3 cut(s) 855, 1470, 1853
BseAI TCCGGA 1 cut(s) 1064
BseBI CCWGG 5 cut(s) 23, 154, 492, 867, 1208
BseDI CCNNGG 4 cut(s) 142, 351, 1490, 1608
BseGI GGATG 2 cut(s) 85, 949
BseLI CCNNNNNNNGG 6 cut(s) 509, 552, 1320, 1321, 1497, 1817
BseMI GCAATG 3 cut(s) 855, 1470, 1853
BseMII CTCAG 5 cut(s) 756, 953, 1517, 1931, 1946
BseNI ACTGG 3 cut(s) 259, 307, 414
BseRI GAGGAG 1 cut(s) 937
BseSI GKGCMC 1 cut(s) 1824
BseXI GCAGC 3 cut(s) 1003, 1724, 1909
BsgI GTGCAG 1 cut(s) 1232
BshFI GGCC 3 cut(s) 157, 215, 1541
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 1 cut(s) 571
BsiSI CCGG 2 cut(s) 1065, 1492
BslFI GGGAC 2 cut(s) 257, 1537
BslI CCNNNNNNNGG 6 cut(s) 509, 552, 1320, 1321, 1497, 1817
BsmAI GTCTC 2 cut(s) 535, 1801
BsmFI GGGAC 2 cut(s) 257, 1537
BsmI GAATGC 1 cut(s) 679
BsnI GGCC 3 cut(s) 157, 215, 1541
Bso31I GGTCTC 1 cut(s) 1801
BsoBI CYCGRG 1 cut(s) 571
Bsp1286I GDGCHC 2 cut(s) 180, 1824
Bsp13I TCCGGA 1 cut(s) 1064
Bsp143I GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
Bsp1720I GCTNAGC 1 cut(s) 1476
BspACI CCGC 6 cut(s) 368, 546, 612, 769, 1189, 1792
BspANI GGCC 3 cut(s) 157, 215, 1541
BspCNI CTCAG 5 cut(s) 757, 952, 1516, 1930, 1945
BspEI TCCGGA 1 cut(s) 1064
BspHI TCATGA 2 cut(s) 291, 1231
BspLI GGNNCC 5 cut(s) 486, 1063, 1205, 1488, 1542
BspPI GGATC 5 cut(s) 479, 492, 521, 1481, 1494
BspTI CTTAAG 1 cut(s) 52
BspTNI GGTCTC 1 cut(s) 1801
BsrBI CCGCTC 1 cut(s) 769
BsrDI GCAATG 3 cut(s) 855, 1470, 1853
BsrI ACTGG 3 cut(s) 259, 307, 414
BssECI CCNNGG 4 cut(s) 142, 351, 1490, 1608
BssMI GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
BssNAI GTATAC 1 cut(s) 1075
BssSI CACGAG 1 cut(s) 1481
BssT1I CCWWGG 2 cut(s) 142, 1608
Bst1107I GTATAC 1 cut(s) 1075
Bst2BI CACGAG 1 cut(s) 1481
Bst2UI CCWGG 5 cut(s) 23, 154, 492, 867, 1208
Bst4CI ACNGT 7 cut(s) 119, 203, 248, 628, 955, 1111, 1966
Bst6I CTCTTC 5 cut(s) 538, 805, 914, 1115, 1799
BstAFI CTTAAG 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 1825
BstC8I GCNNGC 1 cut(s) 1036
BstDEI CTNAG 8 cut(s) 765, 939, 1345, 1452, 1476, 1503, 1917, 1932
BstDSI CCRYGG 1 cut(s) 351
BstF5I GGATG 2 cut(s) 85, 949
BstHHI GCGC 1 cut(s) 237
BstKTI GATC 7 cut(s) 297, 487, 516, 967, 1096, 1489, 1885
BstMAI GTCTC 2 cut(s) 535, 1801
BstMBI GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
BstMWI GCNNNNNNNGC 2 cut(s) 45, 221
BstNI CCWGG 5 cut(s) 23, 154, 492, 867, 1208
BstNSI RCATGY 4 cut(s) 776, 1588, 1623, 1879
BstSCI CCNGG 6 cut(s) 21, 152, 490, 865, 1206, 1490
BstSLI GKGCMC 1 cut(s) 1824
BstV1I GCAGC 3 cut(s) 1003, 1724, 1909
BstV2I GAAGAC 3 cut(s) 310, 842, 1637
BstX2I RGATCY 4 cut(s) 484, 964, 1093, 1486
BstYI RGATCY 4 cut(s) 484, 964, 1093, 1486
BstZ17I GTATAC 1 cut(s) 1075
Bsu36I CCTNAGG 1 cut(s) 1345
BsuI GTATCC 1 cut(s) 1526
BsuRI GGCC 3 cut(s) 157, 215, 1541
BtgI CCRYGG 1 cut(s) 351
BtsCI GGATG 2 cut(s) 85, 949
BtsI GCAGTG 1 cut(s) 1397
BtsIMutI CAGTG 4 cut(s) 300, 328, 951, 1397
Cac8I GCNNGC 1 cut(s) 1036
CaiI CAGNNNCTG 2 cut(s) 1115, 1139
CciI TCATGA 2 cut(s) 291, 1231
CfoI GCGC 1 cut(s) 237
Cfr13I GGNCC 3 cut(s) 213, 1062, 1540
CsiI ACCWGGT 1 cut(s) 1206
Csp6I GTAC 6 cut(s) 249, 276, 500, 1333, 1785, 1892
CspCI CAANNNNNGTGG 2 cut(s) 1497, 1532
CviQI GTAC 6 cut(s) 249, 276, 500, 1333, 1785, 1892
DdeI CTNAG 8 cut(s) 765, 939, 1345, 1452, 1476, 1503, 1917, 1932
DpnI GATC 7 cut(s) 296, 486, 515, 966, 1095, 1488, 1884
DpnII GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
DraI TTTAAA 1 cut(s) 196
Eam1104I CTCTTC 5 cut(s) 538, 805, 914, 1115, 1799
EarI CTCTTC 5 cut(s) 538, 805, 914, 1115, 1799
EciI GGCGGA 2 cut(s) 357, 535
Ecl136II GAGCTC 1 cut(s) 178
Eco130I CCWWGG 2 cut(s) 142, 1608
Eco24I GRGCYC 1 cut(s) 180
Eco31I GGTCTC 1 cut(s) 1801
Eco32I GATATC 2 cut(s) 1411, 1938
Eco47I GGWCC 1 cut(s) 1062
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 7 cut(s) 82, 256, 304, 519, 1341, 1429, 1823
Eco81I CCTNAGG 1 cut(s) 1345
Eco88I CYCGRG 1 cut(s) 571
EcoICRI GAGCTC 1 cut(s) 178
EcoRI GAATTC 1 cut(s) 791
EcoRII CCWGG 5 cut(s) 21, 152, 490, 865, 1206
EcoRV GATATC 2 cut(s) 1411, 1938
EcoT14I CCWWGG 2 cut(s) 142, 1608
EcoT22I ATGCAT 3 cut(s) 592, 1264, 1881
EcoT38I GRGCYC 1 cut(s) 180
ErhI CCWWGG 2 cut(s) 142, 1608
FalI AAGNNNNNCTT 6 cut(s) 827, 859, 1112, 1144, 1328, 1360
FaqI GGGAC 2 cut(s) 257, 1537
FbaI TGATCA 1 cut(s) 1882
FblI GTMKAC 2 cut(s) 138, 1074
Fnu4HI GCNGC 5 cut(s) 770, 1017, 1189, 1713, 1923
FokI GGATG 2 cut(s) 72, 956
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 5 cut(s) 770, 1017, 1189, 1713, 1923
FspBI CTAG 5 cut(s) 392, 1049, 1305, 1569, 1953
GlaI GCGC 1 cut(s) 236
GluI GCNGC 5 cut(s) 770, 1017, 1189, 1713, 1923
HaeIII GGCC 3 cut(s) 157, 215, 1541
HapII CCGG 2 cut(s) 1065, 1492
HhaI GCGC 1 cut(s) 237
Hin6I GCGC 1 cut(s) 235
HinP1I GCGC 1 cut(s) 235
HincII GTYRAC 2 cut(s) 700, 1944
HindII GTYRAC 2 cut(s) 700, 1944
HindIII AAGCTT 2 cut(s) 710, 1454
HinfI GANTC 6 cut(s) 847, 1083, 1125, 1136, 1501, 1577
HpaI GTTAAC 1 cut(s) 1944
HpaII CCGG 2 cut(s) 1065, 1492
HphI GGTGA 4 cut(s) 158, 172, 1472, 1781
Hpy166II GTNNAC 6 cut(s) 139, 700, 951, 1075, 1785, 1944
Hpy188I TCNGA 9 cut(s) 166, 209, 766, 879, 1141, 1203, 1506, 1582, 1935
Hpy188III TCNNGA 8 cut(s) 292, 719, 844, 941, 968, 1065, 1232, 1706
Hpy8I GTNNAC 6 cut(s) 139, 700, 951, 1075, 1785, 1944
Hpy99I CGWCG 1 cut(s) 166
HpyAV CCTTC 8 cut(s) 106, 168, 991, 1038, 1373, 1553, 1620, 1825
HpyCH4III ACNGT 7 cut(s) 119, 203, 248, 628, 955, 1111, 1966
HpyCH4IV ACGT 2 cut(s) 638, 1824
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 221
HpyF3I CTNAG 8 cut(s) 765, 939, 1345, 1452, 1476, 1503, 1917, 1932
HpySE526I ACGT 2 cut(s) 638, 1824
HspAI GCGC 1 cut(s) 235
Kpn2I TCCGGA 1 cut(s) 1064
Ksp22I TGATCA 1 cut(s) 1882
KspAI GTTAAC 1 cut(s) 1944
Kzo9I GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
Lsp1109I GCAGC 3 cut(s) 1003, 1724, 1909
LweI GCATC 5 cut(s) 139, 573, 870, 1372, 1699
MabI ACCWGGT 1 cut(s) 1206
MaeI CTAG 5 cut(s) 392, 1049, 1305, 1569, 1953
MaeII ACGT 2 cut(s) 638, 1824
MaeIII GTNAC 4 cut(s) 258, 727, 976, 998
MalI GATC 7 cut(s) 296, 486, 515, 966, 1095, 1488, 1884
MbiI CCGCTC 1 cut(s) 769
MboI GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
MflI RGATCY 4 cut(s) 484, 964, 1093, 1486
MhlI GDGCHC 2 cut(s) 180, 1824
MluCI AATT 9 cut(s) 63, 110, 280, 791, 861, 1007, 1599, 1614, 1735
MlyI GAGTC 3 cut(s) 1077, 1495, 1586
MmeI TCCRAC 4 cut(s) 144, 187, 1413, 1753
Mph1103I ATGCAT 3 cut(s) 592, 1264, 1881
MroI TCCGGA 1 cut(s) 1064
MroXI GAANNNNTTC 2 cut(s) 839, 1160
MseI TTAA 7 cut(s) 53, 195, 654, 1193, 1496, 1943, 1975
MslI CAYNNNNRTG 3 cut(s) 290, 878, 1380
MspA1I CMGCKG 1 cut(s) 1715
MspCI CTTAAG 1 cut(s) 52
MspI CCGG 2 cut(s) 1065, 1492
MspR9I CCNGG 6 cut(s) 23, 154, 492, 867, 1208, 1492
Mva1269I GAATGC 1 cut(s) 679
MvaI CCWGG 5 cut(s) 23, 154, 492, 867, 1208
MwoI GCNNNNNNNGC 2 cut(s) 45, 221
NciI CCSGG 1 cut(s) 1492
NdeII GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
NlaIV GGNNCC 5 cut(s) 486, 1063, 1205, 1488, 1542
NmuCI GTSAC 1 cut(s) 258
NsiI ATGCAT 3 cut(s) 592, 1264, 1881
NspI RCATGY 4 cut(s) 776, 1588, 1623, 1879
PagI TCATGA 2 cut(s) 291, 1231
PciI ACATGT 1 cut(s) 1584
PctI GAATGC 1 cut(s) 679
PdmI GAANNNNTTC 2 cut(s) 839, 1160
PfeI GAWTC 3 cut(s) 847, 1125, 1136
PkrI GCNGC 5 cut(s) 771, 1018, 1190, 1714, 1924
PleI GAGTC 3 cut(s) 1077, 1495, 1585
PpsI GAGTC 3 cut(s) 1077, 1495, 1585
Ppu21I YACGTR 1 cut(s) 1825
PscI ACATGT 1 cut(s) 1584
PsiI TTATAA 1 cut(s) 1740
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 5 cut(s) 21, 152, 490, 865, 1206
PspGI CCWGG 5 cut(s) 21, 152, 490, 865, 1206
PspN4I GGNNCC 5 cut(s) 486, 1063, 1205, 1488, 1542
PspPI GGNCC 3 cut(s) 213, 1062, 1540
PsrI GAACNNNNNNTAC 2 cut(s) 1818, 1850
PstNI CAGNNNCTG 2 cut(s) 1115, 1139
PsuI RGATCY 4 cut(s) 484, 964, 1093, 1486
PvuII CAGCTG 1 cut(s) 1715
RsaI GTAC 6 cut(s) 250, 277, 501, 1334, 1786, 1893
RsaNI GTAC 6 cut(s) 249, 276, 500, 1333, 1785, 1892
RseI CAYNNNNRTG 3 cut(s) 290, 878, 1380
SacI GAGCTC 1 cut(s) 180
SaqAI TTAA 7 cut(s) 53, 195, 654, 1193, 1496, 1943, 1975
SatI GCNGC 5 cut(s) 770, 1017, 1189, 1713, 1923
Sau3AI GATC 7 cut(s) 294, 484, 513, 964, 1093, 1486, 1882
Sau96I GGNCC 3 cut(s) 213, 1062, 1540
ScaI AGTACT 2 cut(s) 250, 277
SchI GAGTC 3 cut(s) 1077, 1495, 1586
ScrFI CCNGG 6 cut(s) 23, 154, 492, 867, 1208, 1492
SduI GDGCHC 2 cut(s) 180, 1824
SexAI ACCWGGT 1 cut(s) 1206
SfaNI GCATC 5 cut(s) 139, 573, 870, 1372, 1699
SinI GGWCC 1 cut(s) 1062
SmiMI CAYNNNNRTG 3 cut(s) 290, 878, 1380
SmlI CTYRAG 2 cut(s) 52, 968
SmoI CTYRAG 2 cut(s) 52, 968
Sse9I AATT 9 cut(s) 63, 110, 280, 791, 861, 1007, 1599, 1614, 1735
SsiI CCGC 6 cut(s) 368, 546, 612, 769, 1189, 1792
SspMI CTAG 5 cut(s) 392, 1049, 1305, 1569, 1953
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 6 cut(s) 21, 152, 490, 865, 1206, 1490
StyI CCWWGG 2 cut(s) 142, 1608
TaaI ACNGT 7 cut(s) 119, 203, 248, 628, 955, 1111, 1966
TaiI ACGT 2 cut(s) 641, 1827
TaqI TCGA 2 cut(s) 297, 914
TasI AATT 9 cut(s) 63, 110, 280, 791, 861, 1007, 1599, 1614, 1735
TatI WGTACW 4 cut(s) 248, 275, 1784, 1891
TauI GCSGC 2 cut(s) 772, 1191
TfiI GAWTC 3 cut(s) 847, 1125, 1136
Tru1I TTAA 7 cut(s) 53, 195, 654, 1193, 1496, 1943, 1975
Tru9I TTAA 7 cut(s) 53, 195, 654, 1193, 1496, 1943, 1975
TscAI CASTG 4 cut(s) 307, 328, 958, 1397
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 3 cut(s) 1016, 1712, 1922
Tsp45I GTSAC 1 cut(s) 258
TspGWI ACGGA 1 cut(s) 1659
TspRI CASTG 4 cut(s) 307, 328, 958, 1397
Vha464I CTTAAG 1 cut(s) 52
VpaK11BI GGWCC 1 cut(s) 1062
XapI RAATTY 1 cut(s) 791
XceI RCATGY 4 cut(s) 776, 1588, 1623, 1879
XcmI CCANNNNNNNNNTGG 1 cut(s) 1668
XmiI GTMKAC 2 cut(s) 138, 1074
XmnI GAANNNNTTC 2 cut(s) 839, 1160
XspI CTAG 5 cut(s) 392, 1049, 1305, 1569, 1953
ZrmI AGTACT 2 cut(s) 250, 277
Zsp2I ATGCAT 3 cut(s) 592, 1264, 1881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.