Rh1DG264900

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
48198728 .. 48210442
11715 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG264900.1

Sequence Viewer

Length: 1677 bp
ATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTCTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAGTATAAATCAGTTCGACCAGAGTGCAAATGGAGTTGTCCTTGAAGGTGATGCCCAGTTTTCATCGGGAAGGATTGAGCTCAACCCAGGCACTTATTTCGATGTTGGACATGCTATTTATGCAGAGCCTTTGCACCTATGGGACACTGCTACTGGATCACTGGCAGACTTCACTACTCATTTCACTTTCATGGTCGACTATGGTGATGAAGGGTGGAAATTCAGCGATGGAATTGCCTTTTACCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCGGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATGCCAAGATTGTAACCGTAGAGTTCGACTCCTGGGGAAACGAAGACTGGGATCCAAATCCACTCCGGCCCCATATTGGGATCAACATCAATGAAATCTCTTCAGTTCAATCCGCCGATTGGAATCCCAGTAACATGACCGGGAAGATTGGTAATGCATGGATAACTTATAACGCTACTGCCAACGACCTTACTGTGTTTTGGACATTCGAGCAAAACACAAATCCCGTTTTTCCAGGCAAATCTACTTCTTCCATTACTTACAATGTTGACTTGCGAAAGGTTCTCCCTGAAAGGGTTACAATTGGTTTTTCTGCTTCGGCCGGATTATACCTCGGGCGGCATTTTTTATGTTCATGGGAGTTTAATTCGACTTTGTTGGATAGCGATATTAGTAGAGCCGAAAGCAAGGGAAAGAAGAAAAAGATATTCTTGATACTGGACATTGCCGTACCTGGCTTCATTTTGACGCTTGGTGCAGTGATATGTTGGTTGATGGTATTACGGAATCGGAGAAACAATTACTCCGGCGAAGTCTGTGATCTTGAGAAGCTAGCCTTTCCAAAACGATTTTCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCAAACGATAGAAGGCTAGGCCAAGGAGGGTCAGGGCATGTATATAAAGGACTCATACAAGACCTTGGAGGCTGCATAGTTGCCGTGAAGAGAATCTTTGCAGAACCTAATCAGCATTATGAGAGAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGCGAATGCTTACTTGTTTATGCATATATGCCTAACAACAGCCTTGACACTCATCTATTTGGCAACAGAACAACCCTGCAATGGCAAAACAGAACTGCCTCAACCTCAATACCAATCTCAAATTTCATCTTCTCAGACCTTCCAGAGGGTCAGATCAGGGAAAAAATTGAGAAACTCTGTTCTTCCCTTGATTTTCCATTGAAGAAGCTGTTTGTCATTGATGGATCAACAAGATCAACTCACAGCAATGCTGATGATTTTGCTAAGAAACTTGGTTATGCCTCTTCACTTCGAGCCAGTCTAGTCAGGTTGCAGGAAGAGAATTTGTCAGCTATGAACATCGATCCATGGTACTCGGCATATCCCCGTTCTCATCTCCCGCTTGTTCAAATGTTGGCTGCAATTGGTGATGTGGACAAGAAAGCAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

62.4

Weight (kDa)

5.89

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 273 5.4e-62 Legume lectin domain
Lectin_L-type_dom PF18483 50 - 258 2.9e-07 Legume lectin beta-barrel domain
Pkinase PF00069 347 - 438 9.1e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 349 - 446 3.8e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
AccI GTMKAC 1 cut(s) 303
AciI CCGC 5 cut(s) 390, 543, 769, 1195, 1625
AclWI GGATC 6 cut(s) 271, 476, 489, 518, 1477, 1583
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 3 cut(s) 326, 1366, 1567
AcuI CTGAAG 2 cut(s) 91, 516
AfaI GTAC 3 cut(s) 25, 882, 1598
AfiI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 549, 724, 1032, 1326, 1390
AgsI TTSAA 5 cut(s) 152, 412, 539, 1447, 1634
AjnI CCWGG 5 cut(s) 193, 461, 664, 883, 1212
AjuI GAANNNNNNNTTGG 2 cut(s) 985, 1017
AluBI AGCT 4 cut(s) 187, 982, 1453, 1577
AluI AGCT 4 cut(s) 187, 982, 1453, 1577
Alw21I GWGCWC 1 cut(s) 189
AlwI GGATC 6 cut(s) 271, 476, 489, 518, 1477, 1583
Ama87I CYCGRG 1 cut(s) 764
AoxI GGCC 3 cut(s) 497, 750, 1057
ApeKI GCWGC 4 cut(s) 18, 1022, 1110, 1643
ApoI RAATTY 3 cut(s) 326, 1366, 1567
AspS9I GGNCC 1 cut(s) 498
AsuC2I CCSGG 1 cut(s) 571
AsuHPI GGTGA 4 cut(s) 167, 323, 407, 1664
AsuNHI GCTAGC 1 cut(s) 982
AvaI CYCGRG 1 cut(s) 764
BamHI GGATCC 1 cut(s) 481
BanII GRGCYC 1 cut(s) 189
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BbsI GAAGAC 2 cut(s) 480, 1159
Bbv12I GWGCWC 1 cut(s) 189
BbvI GCAGC 4 cut(s) 30, 1009, 1097, 1630
BccI CCATC 4 cut(s) 329, 919, 1212, 1460
BceAI ACGGC 2 cut(s) 863, 1106
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 187, 221, 323, 357
BciT130I CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BcnI CCSGG 1 cut(s) 571
BfaI CTAG 3 cut(s) 983, 1055, 1547
BisI GCNGC 6 cut(s) 19, 770, 1023, 1111, 1195, 1644
BlsI GCNGC 6 cut(s) 20, 771, 1024, 1112, 1196, 1645
Bme1390I CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
BmeT110I CYCGRG 1 cut(s) 764
BmgT120I GGNCC 1 cut(s) 498
BmiI GGNNCC 2 cut(s) 483, 500
BmrFI CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
BmrI ACTGGG 4 cut(s) 157, 410, 487, 552
BmsI GCATC 1 cut(s) 148
BmtI GCTAGC 1 cut(s) 986
BmuI ACTGGG 4 cut(s) 157, 410, 487, 552
BpiI GAAGAC 2 cut(s) 480, 1159
BplI GAGNNNNNCTC 2 cut(s) 443, 475
BpuEI CTTGAG 1 cut(s) 995
BpuMI CCSGG 1 cut(s) 571
Bsa29I ATCGAT 1 cut(s) 1587
BsaBI GATNNNNATC 3 cut(s) 486, 515, 552
BsaJI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1592
BsaXI ACNNNNNCTCC 2 cut(s) 938, 968
Bsc4I CCNNNNNNNGG 8 cut(s) 386, 506, 507, 549, 724, 1032, 1326, 1390
Bse1I ACTGG 8 cut(s) 163, 265, 273, 405, 482, 558, 873, 1542
Bse3DI GCAATG 3 cut(s) 873, 1331, 1498
Bse8I GATNNNNATC 3 cut(s) 486, 515, 552
BseBI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BseCI ATCGAT 1 cut(s) 1587
BseDI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1592
BseGI GGATG 1 cut(s) 94
BseJI GATNNNNATC 3 cut(s) 486, 515, 552
BseLI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 549, 724, 1032, 1326, 1390
BseMI GCAATG 3 cut(s) 873, 1331, 1498
BseMII CTCAG 1 cut(s) 1392
BseNI ACTGG 8 cut(s) 163, 265, 273, 405, 482, 558, 873, 1542
BseX3I CGGCCG 1 cut(s) 750
BseXI GCAGC 4 cut(s) 30, 1009, 1097, 1630
BsgI GTGCAG 2 cut(s) 927, 1238
Bsh1285I CGRYCG 1 cut(s) 753
BshFI GGCC 3 cut(s) 499, 752, 1059
BshVI ATCGAT 1 cut(s) 1587
BsiEI CGRYCG 1 cut(s) 753
BsiHKAI GWGCWC 1 cut(s) 189
BsiHKCI CYCGRG 1 cut(s) 764
BsiSI CCGG 4 cut(s) 496, 570, 753, 957
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 8 cut(s) 386, 506, 507, 549, 724, 1032, 1326, 1390
BsmFI GGGAC 1 cut(s) 263
BsmI GAATGC 1 cut(s) 1256
BsnI GGCC 3 cut(s) 499, 752, 1059
BsoBI CYCGRG 1 cut(s) 764
Bsp1286I GDGCHC 1 cut(s) 189
Bsp143I GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
Bsp19I CCATGG 1 cut(s) 1592
BspACI CCGC 5 cut(s) 390, 543, 769, 1195, 1625
BspANI GGCC 3 cut(s) 499, 752, 1059
BspCNI CTCAG 1 cut(s) 1391
BspDI ATCGAT 1 cut(s) 1587
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 2 cut(s) 483, 500
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 6 cut(s) 271, 476, 489, 518, 1477, 1583
BsrDI GCAATG 3 cut(s) 873, 1331, 1498
BsrI ACTGG 8 cut(s) 163, 265, 273, 405, 482, 558, 873, 1542
BssECI CCNNGG 6 cut(s) 193, 462, 763, 1060, 1102, 1592
BssMI GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
BssT1I CCWWGG 3 cut(s) 1060, 1102, 1592
Bst2UI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
Bst4CI ACNGT 3 cut(s) 371, 448, 625
Bst6I CTCTTC 4 cut(s) 535, 1121, 1534, 1557
BstAPI GCANNNNNTGC 1 cut(s) 51
BstC8I GCNNGC 2 cut(s) 30, 984
BstDEI CTNAG 2 cut(s) 1378, 1509
BstDSI CCRYGG 1 cut(s) 1592
BstENI CCTNNNNNAGG 1 cut(s) 1388
BstF5I GGATG 1 cut(s) 94
BstKTI GATC 8 cut(s) 266, 484, 513, 973, 1401, 1472, 1481, 1591
BstMBI GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
BstMCI CGRYCG 1 cut(s) 753
BstMWI GCNNNNNNNGC 3 cut(s) 18, 51, 227
BstNI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
BstNSI RCATGY 2 cut(s) 221, 1079
BstSCI CCNGG 6 cut(s) 193, 461, 569, 664, 883, 1212
BstV1I GCAGC 4 cut(s) 30, 1009, 1097, 1630
BstV2I GAAGAC 2 cut(s) 480, 1159
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BstZI CGGCCG 1 cut(s) 750
Bsu15I ATCGAT 1 cut(s) 1587
BsuRI GGCC 3 cut(s) 499, 752, 1059
BsuTUI ATCGAT 1 cut(s) 1587
BtgI CCRYGG 1 cut(s) 1592
BtgZI GCGATG 1 cut(s) 348
BtsCI GGATG 1 cut(s) 94
BtsI GCAGTG 2 cut(s) 252, 915
BtsIMutI CAGTG 3 cut(s) 252, 266, 915
Cac8I GCNNGC 2 cut(s) 30, 984
CciI TCATGA 1 cut(s) 1237
Cfr13I GGNCC 1 cut(s) 498
ClaI ATCGAT 1 cut(s) 1587
CseI GACGC 1 cut(s) 907
CsiI ACCWGGT 1 cut(s) 1212
Csp6I GTAC 3 cut(s) 24, 881, 1597
CviAII CATG 8 cut(s) 218, 298, 565, 588, 786, 1076, 1238, 1593
CviQI GTAC 3 cut(s) 24, 881, 1597
DdeI CTNAG 2 cut(s) 1378, 1509
DpnI GATC 8 cut(s) 265, 483, 512, 972, 1400, 1471, 1480, 1590
DpnII GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
EaeI YGGCCR 1 cut(s) 750
EagI CGGCCG 1 cut(s) 750
Eam1104I CTCTTC 4 cut(s) 535, 1121, 1534, 1557
EarI CTCTTC 4 cut(s) 535, 1121, 1534, 1557
EciI GGCGGA 1 cut(s) 532
Ecl136II GAGCTC 1 cut(s) 187
EclXI CGGCCG 1 cut(s) 750
Eco130I CCWWGG 3 cut(s) 1060, 1102, 1592
Eco24I GRGCYC 1 cut(s) 189
Eco52I CGGCCG 1 cut(s) 750
Eco53kI GAGCTC 1 cut(s) 187
Eco57I CTGAAG 2 cut(s) 91, 516
Eco88I CYCGRG 1 cut(s) 764
EcoICRI GAGCTC 1 cut(s) 187
EcoNI CCTNNNNNAGG 1 cut(s) 1388
EcoRII CCWGG 5 cut(s) 193, 461, 664, 883, 1212
EcoT14I CCWWGG 3 cut(s) 1060, 1102, 1592
EcoT22I ATGCAT 2 cut(s) 589, 1270
EcoT38I GRGCYC 1 cut(s) 189
ErhI CCWWGG 3 cut(s) 1060, 1102, 1592
FaeI CATG 8 cut(s) 221, 301, 568, 591, 789, 1079, 1241, 1596
FalI AAGNNNNNCTT 6 cut(s) 845, 877, 971, 1003, 1118, 1150
FaqI GGGAC 1 cut(s) 263
FatI CATG 8 cut(s) 217, 297, 564, 587, 785, 1075, 1237, 1592
FauI CCCGC 1 cut(s) 1632
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 6 cut(s) 19, 770, 1023, 1111, 1195, 1644
FokI GGATG 1 cut(s) 81
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 6 cut(s) 19, 770, 1023, 1111, 1195, 1644
FspBI CTAG 3 cut(s) 983, 1055, 1547
GluI GCNGC 6 cut(s) 19, 770, 1023, 1111, 1195, 1644
HaeIII GGCC 3 cut(s) 499, 752, 1059
HapII CCGG 4 cut(s) 496, 570, 753, 957
HgaI GACGC 1 cut(s) 907
Hin1II CATG 8 cut(s) 221, 301, 568, 591, 789, 1079, 1241, 1596
HincII GTYRAC 2 cut(s) 304, 700
HindII GTYRAC 2 cut(s) 304, 700
HinfI GANTC 6 cut(s) 458, 553, 937, 1089, 1131, 1164
HpaII CCGG 4 cut(s) 496, 570, 753, 957
HphI GGTGA 4 cut(s) 167, 323, 407, 1664
Hpy166II GTNNAC 4 cut(s) 304, 398, 700, 1660
Hpy188I TCNGA 4 cut(s) 7, 942, 1381, 1398
Hpy188III TCNNGA 5 cut(s) 174, 862, 974, 1238, 1388
Hpy8I GTNNAC 4 cut(s) 304, 398, 700, 1660
HpyAV CCTTC 6 cut(s) 115, 146, 171, 311, 1044, 1394
HpyCH4III ACNGT 3 cut(s) 371, 448, 625
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 51, 227
HpyF3I CTNAG 2 cut(s) 1378, 1509
Hsp92II CATG 8 cut(s) 221, 301, 568, 591, 789, 1079, 1241, 1596
Kzo9I GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
LmnI GCTCC 1 cut(s) 361
Lsp1109I GCAGC 4 cut(s) 30, 1009, 1097, 1630
LweI GCATC 1 cut(s) 148
MabI ACCWGGT 1 cut(s) 1212
MaeI CTAG 3 cut(s) 983, 1055, 1547
MaeIII GTNAC 3 cut(s) 442, 560, 727
MalI GATC 8 cut(s) 265, 483, 512, 972, 1400, 1471, 1480, 1590
MboI GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
MfeI CAATTG 2 cut(s) 732, 1647
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 189
MlyI GAGTC 3 cut(s) 452, 1083, 1173
MmeI TCCRAC 2 cut(s) 193, 789
MnlI CCTC 7 cut(s) 773, 1058, 1100, 1354, 1360, 1384, 1537
Mph1103I ATGCAT 2 cut(s) 589, 1270
MseI TTAA 3 cut(s) 429, 795, 1199
MslI CAYNNNNRTG 2 cut(s) 296, 1491
MspI CCGG 4 cut(s) 496, 570, 753, 957
MspR9I CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
MunI CAATTG 2 cut(s) 732, 1647
Mva1269I GAATGC 1 cut(s) 1256
MvaI CCWGG 5 cut(s) 195, 463, 666, 885, 1214
MwoI GCNNNNNNNGC 3 cut(s) 18, 51, 227
NciI CCSGG 1 cut(s) 571
NcoI CCATGG 1 cut(s) 1592
NdeII GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
NheI GCTAGC 1 cut(s) 982
NlaIII CATG 8 cut(s) 221, 301, 568, 591, 789, 1079, 1241, 1596
NlaIV GGNNCC 2 cut(s) 483, 500
NmeAIII GCCGAG 1 cut(s) 1580
NsiI ATGCAT 2 cut(s) 589, 1270
NspI RCATGY 2 cut(s) 221, 1079
PagI TCATGA 1 cut(s) 1237
PctI GAATGC 1 cut(s) 1256
PfeI GAWTC 3 cut(s) 553, 937, 1131
PkrI GCNGC 6 cut(s) 20, 771, 1024, 1112, 1196, 1645
PleI GAGTC 3 cut(s) 452, 1083, 1172
PpsI GAGTC 3 cut(s) 452, 1083, 1172
PsiI TTATAA 1 cut(s) 600
Psp124BI GAGCTC 1 cut(s) 189
Psp6I CCWGG 5 cut(s) 193, 461, 664, 883, 1212
PspGI CCWGG 5 cut(s) 193, 461, 664, 883, 1212
PspN4I GGNNCC 2 cut(s) 483, 500
PspPI GGNCC 1 cut(s) 498
PsuI RGATCY 1 cut(s) 481
RsaI GTAC 3 cut(s) 25, 882, 1598
RsaNI GTAC 3 cut(s) 24, 881, 1597
RseI CAYNNNNRTG 2 cut(s) 296, 1491
SacI GAGCTC 1 cut(s) 189
SalI GTCGAC 1 cut(s) 302
SaqAI TTAA 3 cut(s) 429, 795, 1199
SatI GCNGC 6 cut(s) 19, 770, 1023, 1111, 1195, 1644
Sau3AI GATC 8 cut(s) 263, 481, 510, 970, 1398, 1469, 1478, 1588
Sau96I GGNCC 1 cut(s) 498
SchI GAGTC 3 cut(s) 452, 1083, 1173
ScrFI CCNGG 6 cut(s) 195, 463, 571, 666, 885, 1214
SduI GDGCHC 1 cut(s) 189
SexAI ACCWGGT 1 cut(s) 1212
SfaNI GCATC 1 cut(s) 148
SmiMI CAYNNNNRTG 2 cut(s) 296, 1491
SmlI CTYRAG 1 cut(s) 974
SmoI CTYRAG 1 cut(s) 974
SsiI CCGC 5 cut(s) 390, 543, 769, 1195, 1625
SspI AATATT 1 cut(s) 49
SspMI CTAG 3 cut(s) 983, 1055, 1547
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 6 cut(s) 193, 461, 569, 664, 883, 1212
StyI CCWWGG 3 cut(s) 1060, 1102, 1592
TaaI ACNGT 3 cut(s) 371, 448, 625
TaqI TCGA 9 cut(s) 123, 207, 303, 456, 639, 800, 1207, 1537, 1587
TauI GCSGC 2 cut(s) 772, 1197
TfiI GAWTC 3 cut(s) 553, 937, 1131
Tru1I TTAA 3 cut(s) 429, 795, 1199
Tru9I TTAA 3 cut(s) 429, 795, 1199
TscAI CASTG 3 cut(s) 259, 273, 915
TseI GCWGC 4 cut(s) 18, 1022, 1110, 1643
TspGWI ACGGA 1 cut(s) 949
TspRI CASTG 3 cut(s) 259, 273, 915
XagI CCTNNNNNAGG 1 cut(s) 1388
XapI RAATTY 3 cut(s) 326, 1366, 1567
XceI RCATGY 2 cut(s) 221, 1079
XcmI CCANNNNNNNNNTGG 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 303
XspI CTAG 3 cut(s) 983, 1055, 1547
Zsp2I ATGCAT 2 cut(s) 589, 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.