FvH4_3g39140

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
33373442 .. 33375520
2079 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g39140.t1

Sequence Viewer

Length: 2079 bp
ATGGCTGTCCATACACAACTACAATTTCTTCTTCTTCTTCTCTTCTCTCTGTTTACCCCTTTCGCAACACCACTAACCTTCAATTTCTCCACCTTCCCCAATGACACCACCTCTTTATTCATCGAAGGAGATGCTTATTATACCGACGGCAAACGCCTCCGGCTCACCAAAACCGCCAAAGAACCTAAACTGGCTGGCAACATCGGTCGAGCCACGTACAGCGAACCATTCCTTCTCCGGGGGAATGACTCGGGAAAACTGAGACTTGCAGACTTCACCACGCACTTTGCATTTGTCATTGACTCTCAAGGCAACAAATCCTACGGTGACGGGTTCGTGTTCTTCTTGGCGCCAAAAGGATCCGTACTCAACAGTATACTAGGAGGTGGCGGCAAGCTTGGCCTCCCCGTCGCAGACCTTCCAGGAGGGAATGAGTACCCTTTTGTGGCGGTGGAGTTTGATATCTACCAGAATCCACCGCCAACCTACCTCGACCCCCCATACGATCATGTCGGGGTCGATGTCAACAATCTCAGGTCTAACATTACCATGGCTTGGTCTGGAGATATTCCGAATGCGAAAATCAACAATGCTTCGATTAGTTATAATTCCAGCTCAAAAACTCTTACTGTTGCATACACCACTTTGGTGAATGATACAGCTGGTATCCAAAAGCAAGTGATGAGATATCTTCGTTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTAATTGTGGGGTTCTCTGCTGGAACCGGTGATAGGGTTTCTTTGCCTGAAATCATCTCATGGAATTTCACTTCGACTTCTATTGTTGATGAGTTTGTTGATTCGAAAGACACTACACCACCAGCTGCACCCAACCCTGATACTGTTGATGAACACAAGTCAAGAAATAACAATATACCGTTACTTGCTGTGGGGCTAGGTGTTGGTTTAAGTATCTTGGTGGCTGCGTTGGCTTTGGTTTGGTTCATCTTTCGGAGGAAGAGCGTTGCAGGGAGAAATGTTGAAGACACTATGATGGTACTAGATGATGAGTTCGAAAGGGGAACAGGCCCAATGAAGTTTATGTACAGCGAGTTGGCTCGAGCCACGAATAATTTTGATGAAGAAGAGAAGCTTGGAGAGGGAGGATTCGGTGGAGTCTATAGAGGATTCATAAGAGACTTAAACGCATATGTAGCGGTTAAGAGGGTCTCCAAGGGATCCAAACAAGGGCTAAAGGAGTACGCAGCCGAAGTCAGGATCATAGGTCGACTAAGGCATCGAAACCTTGTGCAACTCATTGGTTGGTGTCACGAAAACGGGGAGCTCCTTCTTGTGTATGAGCTCATGCCCCATGGAAGTTTAGATTCTTACTTGTTCAAAGCGAGAAGCTTCTTGAATTGGGAGGTAAGATACAAAATTGCTCTTGGCTTGGGCAGCGGTTTGCTTTATCTACATGAAGGATGTGAACAGTGTATACTGCACAGGGATATCAAAGCAAGCAATGTTATGTTGGATTTGAATTTCAACGTAAAGCTTGGAGACTTCGGATTAGCTAGACTTGTGGAGCACGAAAAAGGGTCGCTAACGACGGTTGTGGCTGGAACTAGGGGCTACATGGCTCTTGATTATGTTGTCTCAGGCAAGGCTAGCAAGGAGTCAGATGTGTATAGCTTCGGAGTAGTTGCTCTGGAAATAGCTTGCGGGAGAAAATCCATGGATTTCGATTTGGAAAATAGTAGGATCAACTTAGTGGACTGGGTGTGGGGGCTATATGGAGAAGGGAAACTTATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAAAGACAAATGGAGTGTCTGATGATTGTTGGGTTGTGGTGTGCTCACCCAGATTATACTTCCAGGCCTCCGATACAACAAGCGATTCAAGTGCTTAACTTCAAGGACCAATTGCCCACTCTCCCAGCAATCATGCCAATGGCCCCTTCTTTTGCTCGTCCAGTTATGACATTTAGTGATACCATTAGTGGTTCTGAAACAGGTCATACTAAGTCTTCAAATTCTGACAGCACCAATTCCGCAGGGTTGTCTTCATAG

Protein Analysis

693

Amino Acids

76.33

Weight (kDa)

5.59

Isoelectric Point (pI)

29.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 25 - 275 4.4e-56 Legume lectin domain
Lectin_L-type_dom PF18483 90 - 258 6.3e-07 Legume lectin beta-barrel domain
Pkinase PF00069 371 - 571 1.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 373 - 568 5.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 606
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 555
AccI GTMKAC 3 cut(s) 376, 1261, 1468
AciI CCGC 8 cut(s) 174, 390, 449, 479, 1190, 1431, 1695, 2061
AclWI GGATC 6 cut(s) 354, 367, 1206, 1219, 1259, 1742
AcsI RAATTY 3 cut(s) 796, 1513, 2041
AcyI GRCGYC 1 cut(s) 350
AfaI GTAC 7 cut(s) 218, 366, 437, 719, 1032, 1079, 1235
AfiI CCNNNNNNNGG 6 cut(s) 238, 445, 555, 765, 1221, 1248
AgeI ACCGGT 1 cut(s) 758
AjnI CCWGG 2 cut(s) 421, 1883
AjuI GAANNNNNNNTTGG 4 cut(s) 1110, 1142, 1951, 1983
AleI CACNNNNGTG 1 cut(s) 647
Alw21I GWGCWC 4 cut(s) 1320, 1338, 1563, 1867
Alw26I GTCTC 5 cut(s) 256, 1164, 1207, 1527, 1633
AlwI GGATC 6 cut(s) 354, 367, 1206, 1219, 1259, 1742
Ama87I CYCGRG 2 cut(s) 250, 1092
AoxI GGCC 4 cut(s) 400, 1060, 1886, 1962
ApeKI GCWGC 5 cut(s) 857, 956, 1238, 1428, 1790
ApoI RAATTY 3 cut(s) 796, 1513, 2041
ArsI GACNNNNNNTTYG 2 cut(s) 1822, 1854
AsiGI ACCGGT 1 cut(s) 758
AspLEI GCGC 1 cut(s) 352
AspS9I GGNCC 3 cut(s) 1061, 1927, 1963
AsuC2I CCSGG 1 cut(s) 239
AsuHPI GGTGA 6 cut(s) 157, 268, 338, 661, 773, 1859
AsuII TTCGAA 2 cut(s) 836, 1047
AsuNHI GCTAGC 1 cut(s) 1640
AvaI CYCGRG 2 cut(s) 250, 1092
AvaII GGWCC 1 cut(s) 1927
BamHI GGATCC 2 cut(s) 359, 1211
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 2 cut(s) 1320, 1338
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbsI GAAGAC 3 cut(s) 1023, 2028, 2064
Bbv12I GWGCWC 4 cut(s) 1320, 1338, 1563, 1867
BbvI GCAGC 5 cut(s) 844, 943, 1250, 1440, 1802
BccI CCATC 1 cut(s) 1021
BceAI ACGGC 1 cut(s) 163
BcgI CGANNNNNNTGC 4 cut(s) 113, 147, 1894, 1928
BciT130I CCWGG 2 cut(s) 423, 1885
BciVI GTATCC 1 cut(s) 677
BcnI CCSGG 1 cut(s) 239
BcoDI GTCTC 5 cut(s) 256, 1164, 1207, 1527, 1633
BfaI CTAG 6 cut(s) 380, 929, 1034, 1548, 1599, 1641
BfmI CTRYAG 1 cut(s) 1153
BfoI RGCGCY 1 cut(s) 353
BfuI GTATCC 1 cut(s) 677
BisI GCNGC 6 cut(s) 391, 858, 957, 1239, 1429, 1791
BlsI GCNGC 6 cut(s) 392, 859, 958, 1240, 1430, 1792
BmcAI AGTACT 1 cut(s) 719
Bme1390I CCNGG 3 cut(s) 239, 423, 1885
Bme18I GGWCC 1 cut(s) 1927
BmeT110I CYCGRG 2 cut(s) 250, 1092
BmgT120I GGNCC 3 cut(s) 1061, 1927, 1963
BmiI GGNNCC 5 cut(s) 351, 361, 757, 1213, 1965
BmrFI CCNGG 3 cut(s) 239, 423, 1885
BmrI ACTGGG 1 cut(s) 1759
BmsI GCATC 2 cut(s) 121, 1279
BmtI GCTAGC 1 cut(s) 1644
BmuI ACTGGG 1 cut(s) 1759
BpiI GAAGAC 3 cut(s) 1023, 2028, 2064
BpmI CTGGAG 1 cut(s) 582
Bpu14I TTCGAA 2 cut(s) 836, 1047
BpuEI CTTGAG 1 cut(s) 291
BpuMI CCSGG 1 cut(s) 239
BsaAI YACGTR 2 cut(s) 216, 700
BsaHI GRCGYC 1 cut(s) 350
BsaI GGTCTC 1 cut(s) 1207
BsaJI CCNNGG 5 cut(s) 238, 549, 1206, 1345, 1707
BsaWI WCCGGW 1 cut(s) 758
Bsc4I CCNNNNNNNGG 6 cut(s) 238, 445, 555, 765, 1221, 1248
Bse118I RCCGGY 1 cut(s) 758
Bse1I ACTGG 3 cut(s) 195, 1754, 1982
Bse3DI GCAATG 1 cut(s) 1501
BseBI CCWGG 2 cut(s) 423, 1885
BseDI CCNNGG 5 cut(s) 238, 549, 1206, 1345, 1707
BseGI GGATG 1 cut(s) 1460
BseLI CCNNNNNNNGG 6 cut(s) 238, 445, 555, 765, 1221, 1248
BseMI GCAATG 1 cut(s) 1501
BseMII CTCAG 3 cut(s) 251, 547, 1644
BseNI ACTGG 3 cut(s) 195, 1754, 1982
BseXI GCAGC 5 cut(s) 844, 943, 1250, 1440, 1802
BseYI CCCAGC 1 cut(s) 1945
BsgI GTGCAG 2 cut(s) 843, 1457
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 4 cut(s) 402, 1062, 1888, 1964
BshNI GGYRCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 758
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 4 cut(s) 1320, 1338, 1563, 1867
BsiHKCI CYCGRG 2 cut(s) 250, 1092
BsiSI CCGG 3 cut(s) 160, 238, 759
BslI CCNNNNNNNGG 6 cut(s) 238, 445, 555, 765, 1221, 1248
BsmAI GTCTC 5 cut(s) 256, 1164, 1207, 1527, 1633
BsmI GAATGC 1 cut(s) 580
BsnI GGCC 4 cut(s) 402, 1062, 1888, 1964
Bso31I GGTCTC 1 cut(s) 1207
BsoBI CYCGRG 2 cut(s) 250, 1092
Bsp119I TTCGAA 2 cut(s) 836, 1047
Bsp1286I GDGCHC 4 cut(s) 1320, 1338, 1563, 1867
Bsp1407I TGTACA 1 cut(s) 1077
Bsp143I GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
Bsp19I CCATGG 3 cut(s) 549, 1345, 1707
BspACI CCGC 8 cut(s) 174, 390, 449, 479, 1190, 1431, 1695, 2061
BspANI GGCC 4 cut(s) 402, 1062, 1888, 1964
BspCNI CTCAG 3 cut(s) 252, 546, 1643
BspLI GGNNCC 5 cut(s) 351, 361, 757, 1213, 1965
BspOI GCTAGC 1 cut(s) 1644
BspPI GGATC 6 cut(s) 354, 367, 1206, 1219, 1259, 1742
BspQI GCTCTTC 1 cut(s) 986
BspT104I TTCGAA 2 cut(s) 836, 1047
BspT107I GGYRCC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 1207
BsrDI GCAATG 1 cut(s) 1501
BsrFI RCCGGY 1 cut(s) 758
BsrGI TGTACA 1 cut(s) 1077
BsrI ACTGG 3 cut(s) 195, 1754, 1982
BssAI RCCGGY 1 cut(s) 758
BssECI CCNNGG 5 cut(s) 238, 549, 1206, 1345, 1707
BssMI GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
BssNAI GTATAC 2 cut(s) 377, 1469
BssNI GRCGYC 1 cut(s) 350
BssT1I CCWWGG 4 cut(s) 549, 1206, 1345, 1707
Bst1107I GTATAC 2 cut(s) 377, 1469
Bst2UI CCWGG 2 cut(s) 423, 1885
Bst4CI ACNGT 8 cut(s) 326, 374, 631, 717, 877, 912, 1464, 1585
Bst6I CTCTTC 3 cut(s) 47, 986, 1113
BstACI GRCGYC 1 cut(s) 350
BstAUI TGTACA 1 cut(s) 1077
BstBAI YACGTR 2 cut(s) 216, 700
BstBI TTCGAA 2 cut(s) 836, 1047
BstC8I GCNNGC 5 cut(s) 196, 395, 1492, 1642, 1693
BstDEI CTNAG 6 cut(s) 260, 533, 1265, 1630, 1741, 2031
BstDSI CCRYGG 3 cut(s) 549, 1345, 1707
BstF5I GGATG 1 cut(s) 1460
BstH2I RGCGCY 1 cut(s) 353
BstHHI GCGC 1 cut(s) 352
BstKTI GATC 6 cut(s) 362, 508, 709, 1214, 1254, 1737
BstMAI GTCTC 5 cut(s) 256, 1164, 1207, 1527, 1633
BstMBI GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 5 cut(s) 399, 962, 1187, 1428, 1641
BstNI CCWGG 2 cut(s) 423, 1885
BstSCI CCNGG 3 cut(s) 237, 421, 1883
BstSFI CTRYAG 1 cut(s) 1153
BstV1I GCAGC 5 cut(s) 844, 943, 1250, 1440, 1802
BstV2I GAAGAC 3 cut(s) 1023, 2028, 2064
BstX2I RGATCY 2 cut(s) 359, 1211
BstYI RGATCY 2 cut(s) 359, 1211
BstZ17I GTATAC 2 cut(s) 377, 1469
BsuI GTATCC 1 cut(s) 677
BsuRI GGCC 4 cut(s) 402, 1062, 1888, 1964
BtgI CCRYGG 3 cut(s) 549, 1345, 1707
BtsCI GGATG 1 cut(s) 1460
BtsIMutI CAGTG 1 cut(s) 1469
Cac8I GCNNGC 5 cut(s) 196, 395, 1492, 1642, 1693
CfoI GCGC 1 cut(s) 352
Cfr10I RCCGGY 1 cut(s) 758
Cfr13I GGNCC 3 cut(s) 1061, 1927, 1963
Csp6I GTAC 7 cut(s) 217, 365, 436, 718, 1031, 1078, 1234
CspAI ACCGGT 1 cut(s) 758
CspCI CAANNNNNGTGG 2 cut(s) 268, 303
CviAII CATG 9 cut(s) 509, 550, 792, 1339, 1346, 1448, 1609, 1708, 1954
CviQI GTAC 7 cut(s) 217, 365, 436, 718, 1031, 1078, 1234
DdeI CTNAG 6 cut(s) 260, 533, 1265, 1630, 1741, 2031
DinI GGCGCC 1 cut(s) 351
DpnI GATC 6 cut(s) 361, 507, 708, 1213, 1253, 1736
DpnII GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
Eam1104I CTCTTC 3 cut(s) 47, 986, 1113
EarI CTCTTC 3 cut(s) 47, 986, 1113
Ecl136II GAGCTC 2 cut(s) 1318, 1336
Eco130I CCWWGG 4 cut(s) 549, 1206, 1345, 1707
Eco147I AGGCCT 1 cut(s) 1888
Eco24I GRGCYC 2 cut(s) 1320, 1338
Eco31I GGTCTC 1 cut(s) 1207
Eco32I GATATC 3 cut(s) 463, 689, 1483
Eco47I GGWCC 1 cut(s) 1927
Eco53kI GAGCTC 2 cut(s) 1318, 1336
Eco88I CYCGRG 2 cut(s) 250, 1092
EcoICRI GAGCTC 2 cut(s) 1318, 1336
EcoRII CCWGG 2 cut(s) 421, 1883
EcoRV GATATC 3 cut(s) 463, 689, 1483
EcoT14I CCWWGG 4 cut(s) 549, 1206, 1345, 1707
EcoT38I GRGCYC 2 cut(s) 1320, 1338
EgeI GGCGCC 1 cut(s) 351
EheI GGCGCC 1 cut(s) 351
ErhI CCWWGG 4 cut(s) 549, 1206, 1345, 1707
FaeI CATG 9 cut(s) 512, 553, 795, 1342, 1349, 1451, 1612, 1711, 1957
FalI AAGNNNNNCTT 4 cut(s) 1110, 1142, 1764, 1796
FatI CATG 9 cut(s) 508, 549, 791, 1338, 1345, 1447, 1608, 1707, 1953
FauI CCCGC 1 cut(s) 1688
FauNDI CATATG 1 cut(s) 1183
FblI GTMKAC 3 cut(s) 376, 1261, 1468
Fnu4HI GCNGC 6 cut(s) 391, 858, 957, 1239, 1429, 1791
FokI GGATG 1 cut(s) 1467
FriOI GRGCYC 2 cut(s) 1320, 1338
Fsp4HI GCNGC 6 cut(s) 391, 858, 957, 1239, 1429, 1791
FspBI CTAG 6 cut(s) 380, 929, 1034, 1548, 1599, 1641
GlaI GCGC 1 cut(s) 351
GluI GCNGC 6 cut(s) 391, 858, 957, 1239, 1429, 1791
GsaI CCCAGC 1 cut(s) 1949
GsuI CTGGAG 1 cut(s) 582
HaeII RGCGCY 1 cut(s) 353
HaeIII GGCC 4 cut(s) 402, 1062, 1888, 1964
HapII CCGG 3 cut(s) 160, 238, 759
HhaI GCGC 1 cut(s) 352
Hin1I GRCGYC 1 cut(s) 350
Hin1II CATG 9 cut(s) 512, 553, 795, 1342, 1349, 1451, 1612, 1711, 1957
Hin6I GCGC 1 cut(s) 350
HinP1I GCGC 1 cut(s) 350
HincII GTYRAC 2 cut(s) 526, 1262
HindII GTYRAC 2 cut(s) 526, 1262
HindIII AAGCTT 4 cut(s) 395, 1124, 1381, 1526
HpaII CCGG 3 cut(s) 160, 238, 759
HphI GGTGA 6 cut(s) 157, 268, 338, 661, 773, 1859
Hpy166II GTNNAC 7 cut(s) 54, 377, 526, 1262, 1460, 1469, 1747
Hpy188III TCNNGA 8 cut(s) 252, 561, 894, 1249, 1304, 1387, 1616, 1682
Hpy8I GTNNAC 7 cut(s) 54, 377, 526, 1262, 1460, 1469, 1747
Hpy99I CGWCG 3 cut(s) 149, 413, 1585
HpyAV CCTTC 9 cut(s) 88, 103, 119, 242, 428, 1331, 1445, 1766, 1977
HpyCH4III ACNGT 8 cut(s) 326, 374, 631, 717, 877, 912, 1464, 1585
HpyCH4IV ACGT 3 cut(s) 215, 699, 1521
HpyCH4V TGCA 7 cut(s) 269, 290, 635, 860, 1001, 1285, 1474
HpyF10VI GCNNNNNNNGC 5 cut(s) 399, 962, 1187, 1428, 1641
HpyF3I CTNAG 6 cut(s) 260, 533, 1265, 1630, 1741, 2031
HpySE526I ACGT 3 cut(s) 215, 699, 1521
Hsp92I GRCGYC 1 cut(s) 350
Hsp92II CATG 9 cut(s) 512, 553, 795, 1342, 1349, 1451, 1612, 1711, 1957
HspAI GCGC 1 cut(s) 350
KasI GGCGCC 1 cut(s) 349
Kzo9I GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
LguI GCTCTTC 1 cut(s) 986
LmnI GCTCC 3 cut(s) 1315, 1323, 1558
Lsp1109I GCAGC 5 cut(s) 844, 943, 1250, 1440, 1802
LweI GCATC 2 cut(s) 121, 1279
MaeI CTAG 6 cut(s) 380, 929, 1034, 1548, 1599, 1641
MaeII ACGT 3 cut(s) 215, 699, 1521
MaeIII GTNAC 4 cut(s) 326, 695, 912, 1301
MalI GATC 6 cut(s) 361, 507, 708, 1213, 1253, 1736
MboI GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
MfeI CAATTG 1 cut(s) 1931
MflI RGATCY 2 cut(s) 359, 1211
MhlI GDGCHC 4 cut(s) 1320, 1338, 1563, 1867
Mly113I GGCGCC 1 cut(s) 350
MlyI GAGTC 4 cut(s) 242, 296, 1158, 1658
MmeI TCCRAC 1 cut(s) 1485
MseI TTAA 4 cut(s) 941, 1175, 1194, 1917
MslI CAYNNNNRTG 4 cut(s) 548, 647, 1025, 1958
MspA1I CMGCKG 4 cut(s) 662, 857, 1431, 1793
MspI CCGG 3 cut(s) 160, 238, 759
MspR9I CCNGG 3 cut(s) 239, 423, 1885
MunI CAATTG 1 cut(s) 1931
Mva1269I GAATGC 1 cut(s) 580
MvaI CCWGG 2 cut(s) 423, 1885
MwoI GCNNNNNNNGC 5 cut(s) 399, 962, 1187, 1428, 1641
NarI GGCGCC 1 cut(s) 350
NciI CCSGG 1 cut(s) 239
NcoI CCATGG 3 cut(s) 549, 1345, 1707
NdeI CATATG 1 cut(s) 1183
NdeII GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
NheI GCTAGC 1 cut(s) 1640
NlaIII CATG 9 cut(s) 512, 553, 795, 1342, 1349, 1451, 1612, 1711, 1957
NlaIV GGNNCC 5 cut(s) 351, 361, 757, 1213, 1965
NmuCI GTSAC 2 cut(s) 326, 1301
NspV TTCGAA 2 cut(s) 836, 1047
OliI CACNNNNGTG 1 cut(s) 647
PaeR7I CTCGAG 1 cut(s) 1092
PceI AGGCCT 1 cut(s) 1888
PciSI GCTCTTC 1 cut(s) 986
PctI GAATGC 1 cut(s) 580
PfeI GAWTC 6 cut(s) 472, 833, 1140, 1161, 1358, 1906
PflMI CCANNNNNTGG 1 cut(s) 555
PfoI TCCNGGA 1 cut(s) 421
PinAI ACCGGT 1 cut(s) 758
PkrI GCNGC 6 cut(s) 392, 859, 958, 1240, 1430, 1792
PleI GAGTC 4 cut(s) 242, 296, 1157, 1657
PluTI GGCGCC 1 cut(s) 353
PpsI GAGTC 4 cut(s) 242, 296, 1157, 1657
Ppu21I YACGTR 2 cut(s) 216, 700
PsiI TTATAA 1 cut(s) 606
Psp124BI GAGCTC 2 cut(s) 1320, 1338
Psp6I CCWGG 2 cut(s) 421, 1883
PspFI CCCAGC 1 cut(s) 1945
PspGI CCWGG 2 cut(s) 421, 1883
PspN4I GGNNCC 5 cut(s) 351, 361, 757, 1213, 1965
PspPI GGNCC 3 cut(s) 1061, 1927, 1963
PspXI VCTCGAGB 1 cut(s) 1092
PsrI GAACNNNNNNTAC 2 cut(s) 1452, 1484
PsuI RGATCY 2 cut(s) 359, 1211
PvuII CAGCTG 3 cut(s) 662, 857, 1793
RsaI GTAC 7 cut(s) 218, 366, 437, 719, 1032, 1079, 1235
RsaNI GTAC 7 cut(s) 217, 365, 436, 718, 1031, 1078, 1234
RseI CAYNNNNRTG 4 cut(s) 548, 647, 1025, 1958
SacI GAGCTC 2 cut(s) 1320, 1338
SalI GTCGAC 1 cut(s) 1260
SapI GCTCTTC 1 cut(s) 986
SaqAI TTAA 4 cut(s) 941, 1175, 1194, 1917
SatI GCNGC 6 cut(s) 391, 858, 957, 1239, 1429, 1791
Sau3AI GATC 6 cut(s) 359, 505, 706, 1211, 1251, 1734
Sau96I GGNCC 3 cut(s) 1061, 1927, 1963
ScaI AGTACT 1 cut(s) 719
SchI GAGTC 4 cut(s) 242, 296, 1158, 1658
ScrFI CCNGG 3 cut(s) 239, 423, 1885
SduI GDGCHC 4 cut(s) 1320, 1338, 1563, 1867
SfaNI GCATC 2 cut(s) 121, 1279
SfcI CTRYAG 1 cut(s) 1153
SfoI GGCGCC 1 cut(s) 351
Sfr274I CTCGAG 1 cut(s) 1092
SfuI TTCGAA 2 cut(s) 836, 1047
SinI GGWCC 1 cut(s) 1927
SlaI CTCGAG 1 cut(s) 1092
SmiMI CAYNNNNRTG 4 cut(s) 548, 647, 1025, 1958
SmlI CTYRAG 2 cut(s) 306, 1092
SmoI CTYRAG 2 cut(s) 306, 1092
SseBI AGGCCT 1 cut(s) 1888
SsiI CCGC 8 cut(s) 174, 390, 449, 479, 1190, 1431, 1695, 2061
SspDI GGCGCC 1 cut(s) 349
SspMI CTAG 6 cut(s) 380, 929, 1034, 1548, 1599, 1641
SstI GAGCTC 2 cut(s) 1320, 1338
StuI AGGCCT 1 cut(s) 1888
StyD4I CCNGG 3 cut(s) 237, 421, 1883
StyI CCWWGG 4 cut(s) 549, 1206, 1345, 1707
TaaI ACNGT 8 cut(s) 326, 374, 631, 717, 877, 912, 1464, 1585
TaiI ACGT 3 cut(s) 218, 702, 1524
TaqII GACCGA 1 cut(s) 194
TatI WGTACW 2 cut(s) 717, 1077
TauI GCSGC 1 cut(s) 393
TfiI GAWTC 6 cut(s) 472, 833, 1140, 1161, 1358, 1906
Tru1I TTAA 4 cut(s) 941, 1175, 1194, 1917
Tru9I TTAA 4 cut(s) 941, 1175, 1194, 1917
TscAI CASTG 1 cut(s) 1469
TseFI GTSAC 2 cut(s) 326, 1301
TseI GCWGC 5 cut(s) 857, 956, 1238, 1428, 1790
Tsp45I GTSAC 2 cut(s) 326, 1301
TspDTI ATGAA 9 cut(s) 109, 897, 967, 1082, 1128, 1153, 1464, 1836, 2064
TspGWI ACGGA 1 cut(s) 352
TspRI CASTG 1 cut(s) 1469
Van91I CCANNNNNTGG 1 cut(s) 555
VpaK11BI GGWCC 1 cut(s) 1927
XapI RAATTY 3 cut(s) 796, 1513, 2041
XhoI CTCGAG 1 cut(s) 1092
XmiI GTMKAC 3 cut(s) 376, 1261, 1468
XspI CTAG 6 cut(s) 380, 929, 1034, 1548, 1599, 1641
ZrmI AGTACT 1 cut(s) 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.