Rroxscaffold_7G00202240

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000038
Physical Location & Seq
Reverse (-)
50175826 .. 50182015
6190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00202240.1

Sequence Viewer

Length: 888 bp
ATGTCCGAAAGCGAAGAAGCGACGTATGCAAGCAATGCGCTTGTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCGTCTCTCTTTTTGCTCATCCACTCGCTTCGGTATAGATCGGTTCGACCCTAGTACGGATGGAGTACTTATCTATGAAGGTGATGCTCGGTCTTCATCGGGAGTGCTTGAGATCAACACGAGGCTCTTATTTCGGTGTCGGACATGCTACGTATGCGAGCCTTTGCACCTATGGGACACGCTGCGGGATACGGCGGATATCAAATCAGCTAACGTACTATTGGATGATGACTTCAGCAGTAAGCTTGGTGATTTTGGTATCGCCAAGCTTGTGGATCCCCGCTTGAGGTCTCGGACAAGAGGGGTGGTAGGGACTTTTGGATACATGGCCCCGGAATATGCTATTGAAGGGAGGGCTAGTAAGGAATCCGACATGTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAAGACTTACCAAGACGAAGATCCTAATAACGAAGACTCCAGATCATATGAGATTCCTTTCCTCAATAACGGTGAAGATCACGTGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTAGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAACAACAAGGAAAGACCCAAAGCAGGACAGGTGATGAAGGTTATTCAACATGAAGCACCATTGCCGGAACTTCCACATGACATGCATAATGATCTAGAACTGCCTCAACCTCAATACCAATCTCAAATTTCATCTTCTCAGATATCCTCAACTTCTTCTAGCTATCGTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

295

Amino Acids

33.59

Weight (kDa)

4.95

Isoelectric Point (pI)

55.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 92 - 250 4.4e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 92 - 172 5.8e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 262, 272, 358
AclWI GGATC 3 cut(s) 347, 360, 509
AcsI RAATTY 1 cut(s) 840
AcuI CTGAAG 1 cut(s) 295
AcvI CACGTG 1 cut(s) 577
AfaI GTAC 5 cut(s) 133, 144, 294, 706, 883
AfiI CCNNNNNNNGG 3 cut(s) 133, 363, 737
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 2 cut(s) 425, 761
AluBI AGCT 5 cut(s) 287, 322, 346, 635, 876
AluI AGCT 5 cut(s) 287, 322, 346, 635, 876
Alw26I GTCTC 2 cut(s) 86, 372
AlwI GGATC 3 cut(s) 347, 360, 509
AoxI GGCC 1 cut(s) 405
ApeKI GCWGC 2 cut(s) 259, 632
ApoI RAATTY 1 cut(s) 840
AspLEI GCGC 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 406
AsuC2I CCSGG 1 cut(s) 410
AsuHPI GGTGA 5 cut(s) 170, 338, 578, 701, 757
BamHI GGATCC 1 cut(s) 352
BauI CACGAG 1 cut(s) 196
BbrPI CACGTG 1 cut(s) 577
BbsI GAAGAC 3 cut(s) 162, 503, 534
BbvI GCAGC 2 cut(s) 246, 644
BccI CCATC 1 cut(s) 131
BceAI ACGGC 1 cut(s) 285
BciVI GTATCC 2 cut(s) 259, 392
BcnI CCSGG 1 cut(s) 410
BcoDI GTCTC 2 cut(s) 86, 372
BfaI CTAG 5 cut(s) 129, 435, 626, 809, 873
BfuI GTATCC 2 cut(s) 259, 392
BisI GCNGC 2 cut(s) 260, 633
BlsI GCNGC 2 cut(s) 261, 634
BmcAI AGTACT 1 cut(s) 144
Bme1390I CCNGG 1 cut(s) 410
BmgT120I GGNCC 1 cut(s) 406
BmiI GGNNCC 2 cut(s) 354, 408
BmrFI CCNGG 1 cut(s) 410
BmsI GCATC 1 cut(s) 151
BpiI GAAGAC 3 cut(s) 162, 503, 534
BpmI CTGGAG 1 cut(s) 517
BpuEI CTTGAG 2 cut(s) 206, 382
BpuMI CCSGG 1 cut(s) 410
BsaAI YACGTR 2 cut(s) 229, 577
BsaI GGTCTC 1 cut(s) 372
BsaJI CCNNGG 2 cut(s) 408, 474
BsaXI ACNNNNNCTCC 4 cut(s) 421, 451, 515, 545
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 363, 737
Bse3DI GCAATG 2 cut(s) 40, 773
BseDI CCNNGG 2 cut(s) 408, 474
BseGI GGATG 3 cut(s) 95, 142, 307
BseLI CCNNNNNNNGG 3 cut(s) 133, 363, 737
BseMI GCAATG 2 cut(s) 40, 773
BseMII CTCAG 1 cut(s) 866
BseXI GCAGC 2 cut(s) 246, 644
BshFI GGCC 1 cut(s) 407
BsiSI CCGG 2 cut(s) 410, 779
BslFI GGGAC 2 cut(s) 266, 403
BslI CCNNNNNNNGG 3 cut(s) 133, 363, 737
BsmAI GTCTC 2 cut(s) 86, 372
BsmBI CGTCTC 1 cut(s) 86
BsmFI GGGAC 2 cut(s) 266, 403
BsnI GGCC 1 cut(s) 407
Bso31I GGTCTC 1 cut(s) 372
Bsp143I GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
BspACI CCGC 3 cut(s) 262, 272, 358
BspANI GGCC 1 cut(s) 407
BspCNI CTCAG 1 cut(s) 865
BspLI GGNNCC 2 cut(s) 354, 408
BspPI GGATC 3 cut(s) 347, 360, 509
BspTNI GGTCTC 1 cut(s) 372
BsrDI GCAATG 2 cut(s) 40, 773
BssECI CCNNGG 2 cut(s) 408, 474
BssMI GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
BssSI CACGAG 1 cut(s) 196
BssT1I CCWWGG 1 cut(s) 474
Bst2BI CACGAG 1 cut(s) 196
Bst4CI ACNGT 1 cut(s) 566
BstAPI GCANNNNNTGC 2 cut(s) 35, 52
BstBAI YACGTR 2 cut(s) 229, 577
BstC8I GCNNGC 2 cut(s) 31, 236
BstDEI CTNAG 1 cut(s) 852
BstF5I GGATG 3 cut(s) 95, 142, 307
BstHHI GCGC 1 cut(s) 40
BstKTI GATC 8 cut(s) 118, 192, 355, 517, 539, 574, 664, 808
BstMAI GTCTC 2 cut(s) 86, 372
BstMBI GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
BstMWI GCNNNNNNNGC 4 cut(s) 26, 35, 52, 231
BstNSI RCATGY 3 cut(s) 225, 454, 799
BstSCI CCNGG 1 cut(s) 408
BstSNI TACGTA 1 cut(s) 229
BstV1I GCAGC 2 cut(s) 246, 644
BstV2I GAAGAC 3 cut(s) 162, 503, 534
BstX2I RGATCY 2 cut(s) 352, 514
BstXI CCANNNNNNTGG 1 cut(s) 349
BstYI RGATCY 2 cut(s) 352, 514
BsuI GTATCC 2 cut(s) 259, 392
BsuRI GGCC 1 cut(s) 407
BtsCI GGATG 3 cut(s) 95, 142, 307
Cac8I GCNNGC 2 cut(s) 31, 236
CfoI GCGC 1 cut(s) 40
Cfr13I GGNCC 1 cut(s) 406
CseI GACGC 1 cut(s) 638
Csp6I GTAC 5 cut(s) 132, 143, 293, 705, 882
CspCI CAANNNNNGTGG 2 cut(s) 363, 398
CviAII CATG 7 cut(s) 222, 403, 451, 764, 791, 796, 885
CviQI GTAC 5 cut(s) 132, 143, 293, 705, 882
DdeI CTNAG 1 cut(s) 852
DpnI GATC 8 cut(s) 117, 191, 354, 516, 538, 573, 663, 807
DpnII GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
EciI GGCGGA 1 cut(s) 287
Eco105I TACGTA 1 cut(s) 229
Eco130I CCWWGG 1 cut(s) 474
Eco31I GGTCTC 1 cut(s) 372
Eco32I GATATC 2 cut(s) 277, 858
Eco57I CTGAAG 1 cut(s) 295
Eco72I CACGTG 1 cut(s) 577
EcoRV GATATC 2 cut(s) 277, 858
EcoT14I CCWWGG 1 cut(s) 474
EcoT22I ATGCAT 1 cut(s) 801
ErhI CCWWGG 1 cut(s) 474
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 7 cut(s) 225, 406, 454, 767, 794, 799, 888
FalI AAGNNNNNCTT 2 cut(s) 484, 516
FaqI GGGAC 2 cut(s) 266, 403
FatI CATG 7 cut(s) 221, 402, 450, 763, 790, 795, 884
FauI CCCGC 2 cut(s) 255, 365
FauNDI CATATG 1 cut(s) 541
Fnu4HI GCNGC 2 cut(s) 260, 633
FokI GGATG 3 cut(s) 82, 149, 314
Fsp4HI GCNGC 2 cut(s) 260, 633
FspBI CTAG 5 cut(s) 129, 435, 626, 809, 873
GlaI GCGC 1 cut(s) 39
GluI GCNGC 2 cut(s) 260, 633
GsuI CTGGAG 1 cut(s) 517
HaeIII GGCC 1 cut(s) 407
HapII CCGG 2 cut(s) 410, 779
HgaI GACGC 1 cut(s) 638
HhaI GCGC 1 cut(s) 40
Hin1II CATG 7 cut(s) 225, 406, 454, 767, 794, 799, 888
Hin6I GCGC 1 cut(s) 38
HinP1I GCGC 1 cut(s) 38
HindIII AAGCTT 2 cut(s) 320, 344
HinfI GANTC 3 cut(s) 443, 530, 547
HpaII CCGG 2 cut(s) 410, 779
HphI GGTGA 5 cut(s) 170, 338, 578, 701, 757
Hpy166II GTNNAC 1 cut(s) 705
Hpy188I TCNGA 5 cut(s) 7, 219, 372, 448, 855
Hpy188III TCNNGA 4 cut(s) 177, 534, 626, 809
Hpy8I GTNNAC 1 cut(s) 705
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 4 cut(s) 149, 419, 486, 745
HpyCH4III ACNGT 1 cut(s) 566
HpyCH4IV ACGT 4 cut(s) 23, 228, 291, 576
HpyCH4V TGCA 5 cut(s) 29, 46, 244, 614, 799
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 35, 52, 231
HpyF3I CTNAG 1 cut(s) 852
HpySE526I ACGT 4 cut(s) 23, 228, 291, 576
Hsp92II CATG 7 cut(s) 225, 406, 454, 767, 794, 799, 888
HspAI GCGC 1 cut(s) 38
Kzo9I GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
LpnPI CCDG 6 cut(s) 423, 547, 600, 723, 728, 792
Lsp1109I GCAGC 2 cut(s) 246, 644
LweI GCATC 1 cut(s) 151
MaeI CTAG 5 cut(s) 129, 435, 626, 809, 873
MaeII ACGT 4 cut(s) 23, 228, 291, 576
MalI GATC 8 cut(s) 117, 191, 354, 516, 538, 573, 663, 807
MboI GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
MboII GAAGA 8 cut(s) 26, 162, 508, 524, 539, 581, 840, 861
MflI RGATCY 2 cut(s) 352, 514
MluCI AATT 5 cut(s) 61, 74, 480, 655, 840
MlyI GAGTC 1 cut(s) 524
MmeI TCCRAC 3 cut(s) 197, 471, 673
MnlI CCTC 8 cut(s) 192, 357, 371, 423, 566, 828, 834, 871
Mph1103I ATGCAT 1 cut(s) 801
MspA1I CMGCKG 1 cut(s) 635
MspI CCGG 2 cut(s) 410, 779
MspR9I CCNGG 1 cut(s) 410
MwoI GCNNNNNNNGC 4 cut(s) 26, 35, 52, 231
NciI CCSGG 1 cut(s) 410
NdeI CATATG 1 cut(s) 541
NdeII GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
NlaIII CATG 7 cut(s) 225, 406, 454, 767, 794, 799, 888
NlaIV GGNNCC 2 cut(s) 354, 408
NsiI ATGCAT 1 cut(s) 801
NspI RCATGY 3 cut(s) 225, 454, 799
PciI ACATGT 1 cut(s) 450
PfeI GAWTC 2 cut(s) 443, 547
PkrI GCNGC 2 cut(s) 261, 634
PleI GAGTC 1 cut(s) 524
PmaCI CACGTG 1 cut(s) 577
PmlI CACGTG 1 cut(s) 577
PpsI GAGTC 1 cut(s) 524
Ppu21I YACGTR 2 cut(s) 229, 577
PscI ACATGT 1 cut(s) 450
PspCI CACGTG 1 cut(s) 577
PspN4I GGNNCC 2 cut(s) 354, 408
PspPI GGNCC 1 cut(s) 406
PsuI RGATCY 2 cut(s) 352, 514
PvuII CAGCTG 1 cut(s) 635
RsaI GTAC 5 cut(s) 133, 144, 294, 706, 883
RsaNI GTAC 5 cut(s) 132, 143, 293, 705, 882
SatI GCNGC 2 cut(s) 260, 633
Sau3AI GATC 8 cut(s) 115, 189, 352, 514, 536, 571, 661, 805
Sau96I GGNCC 1 cut(s) 406
ScaI AGTACT 1 cut(s) 144
SchI GAGTC 1 cut(s) 524
ScrFI CCNGG 1 cut(s) 410
SfaNI GCATC 1 cut(s) 151
SmlI CTYRAG 2 cut(s) 185, 361
SmoI CTYRAG 2 cut(s) 185, 361
SnaBI TACGTA 1 cut(s) 229
Sse9I AATT 5 cut(s) 61, 74, 480, 655, 840
SsiI CCGC 3 cut(s) 262, 272, 358
SspI AATATT 2 cut(s) 50, 622
SspMI CTAG 5 cut(s) 129, 435, 626, 809, 873
StyD4I CCNGG 1 cut(s) 408
StyI CCWWGG 1 cut(s) 474
TaaI ACNGT 1 cut(s) 566
TaiI ACGT 4 cut(s) 26, 231, 294, 579
TaqI TCGA 2 cut(s) 123, 664
TaqII GACCGA 1 cut(s) 156
TasI AATT 5 cut(s) 61, 74, 480, 655, 840
TatI WGTACW 2 cut(s) 142, 704
TfiI GAWTC 2 cut(s) 443, 547
TseI GCWGC 2 cut(s) 259, 632
TspGWI ACGGA 1 cut(s) 149
XapI RAATTY 1 cut(s) 840
XbaI TCTAGA 2 cut(s) 625, 808
XceI RCATGY 3 cut(s) 225, 454, 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 588
XspI CTAG 5 cut(s) 129, 435, 626, 809, 873
ZrmI AGTACT 1 cut(s) 144
Zsp2I ATGCAT 1 cut(s) 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.