AT5G65600
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
26215991 .. 26218623
2633 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G65600.1

Sequence Viewer

Length: 2028 bp
ATGCTTTATTTCATTTTCTGTCAAAATCTTTCTTCTTCCTCCTCTATGTCTAATTCAATCTTGTTCCTTTCCCTTTTCCTCTTCCTCCCTTTTGTTGTTGATTCACTTTACTTCAACTTTACAAGTTTTCGACAAGGTGATCCCGGGGACATATTTTACCACGGGGATGCAACTCCCGATGAAGATGGAACAGTGAACTTCAACAACGCTGAACAAACATCTCAGGTTGGTTGGATTACTTATTCAAAGAAGGTGCCTATATGGAGTCATAAAACTGGTAAGGCTTCAGATTTCAGCACCAGTTTCTCCTTCAAAATCGATGCTCGTAATCTTTCAGCAGATGGTCATGGAATCTGTTTCTTTCTTGCTCCTATGGGAGCTCAACTACCTGCATACTCAGTTGGTGGTTTCTTGAATTTGTTCACTCGGAAGAATAATTACTCATCTTCGTTTCCGCTAGTTCATGTTGAATTTGACACGTTTAACAATCCAGGATGGGATCCTAATGATGTTGGATCTCATGTTGGGATCAATAACAACTCTCTTGTTTCTTCCAACTACACTTCTTGGAATGCAAGCTCTCACAGCCAAGATATTTGTCATGCAAAGATCTCTTATGATTCCGTGACCAAGAATTTAAGTGTGACTTGGGCTTATGAGCTAACAGCAACCTCTGATCCTAAGGAGAGTTCAAGCCTTTCTTACATCATCGACCTCGCTAAGGTTCTGCCATCAGATGTTATGTTCGGGTTTATAGCTGCCGCTGGGACAAACACAGAGGAACATAGACTTTTATCATGGGAGCTCAGTTCAAGTTTGGACAGCGACAAAGCCGATAGCAGGATAGGACTAGTAATTGGCATTTCGGCTTCCGGGTTTGTTTTTCTGACGTTTATGGTCATCACAACCGTGGTGGTTTGGTCACGGAAGCAAAGAAAGAAGAAAGAAAGAGATATAGAAAACATGATATCGATAAACAAAGACCTTGAAAGGGAAGCAGGACCAAGAAAGTTTTCTTATAAGGATCTTGTGTCAGCAACCAACAGATTCTCAAGCCATAGAAAGCTAGGTGAAGGAGGATTTGGAGCAGTTTATGAAGGAAACTTGAAAGAAATCAATACAATGGTTGCGGTGAAGAAACTATCCGGTGATTCAAGGCAGGGAAAGAACGAGTTTTTAAACGAAGTTAAGATCATCAGCAAACTGAGACATCGAAACCTCGTGCAGCTCATCGGTTGGTGTAATGAGAAAAATGAGTTCTTGCTGATATATGAGTTAGTTCCAAATGGTAGCTTGAACTCTCACCTCTTTGGGAAAAGACCCAATTTACTTTCTTGGGACATAAGGTACAAGATAGGTCTTGGTTTAGCCTCTGCTCTGCTTTATCTTCATGAAGAATGGGATCAATGTGTACTGCACAGAGACATCAAGGCAAGTAATATAATGCTTGACAGTGAATTCAATGTAAAGTTAGGTGATTTCGGGTTGGCTCGGCTAATGAACCATGAACTTGGTTCCCATACAACGGGGTTGGCTGGAACTTTTGGGTACATGGCACCTGAATATGTAATGAAAGGAAGTGCGAGTAAAGAATCTGATATATATAGCTTTGGAATTGTTTTACTAGAGATTGTCACAGGGAGAAAATCGCTGGAACGTACACAAGAAGATAACAGTGATACAGAGAGTGATGATGAGAAGAGTCTAGTGGAGAAAGTTTGGGAGCTTTATGGAAAACAAGAACTGATCACTTCATGTGTTGATGACAAATTGGGTGAGGATTTCGACAAGAAAGAAGCTGAATGTCTTCTGGTTTTAGGGTTATGGTGTGCTCATCCTGATAAAAACTCGAGACCTTCGATAAAACAAGGGATCCAAGTCATGAATTTTGAGTCACCATTGCCTGATCTTCCATTGAAGAGGCCTGTTGCTATGTATTACATCTCGACTACTACTTCTTCTTCTTCTCCCTCAGTTAACTCAAATGGAGTTTCTGTAACGTTCTCAGGCATCGAGTATGGTCGTTAA

Protein Analysis

675

Amino Acids

75.29

Weight (kDa)

5.73

Isoelectric Point (pI)

30.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 36 - 278 5.4e-63 Legume lectin domain
Lectin_L-type_dom PF18483 55 - 263 7.3e-06 Legume lectin beta-barrel domain
Pkinase PF00069 351 - 626 6.6e-52 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 567 5.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1020
Acc36I ACCTGC 1 cut(s) 397
AccB1I GGYRCC 2 cut(s) 253, 1555
AciI CCGC 3 cut(s) 455, 762, 1130
AclI AACGTT 1 cut(s) 2000
AcsI RAATTY 5 cut(s) 415, 470, 634, 1457, 1885
AcuI CTGAAG 1 cut(s) 270
AfaI GTAC 4 cut(s) 1349, 1413, 1550, 1660
AfiI CCNNNNNNNGG 4 cut(s) 721, 840, 991, 1525
AflIII ACRYGT 1 cut(s) 477
AhlI ACTAGT 1 cut(s) 850
AjnI CCWGG 1 cut(s) 490
AjuI GAANNNNNNNTTGG 4 cut(s) 997, 1029, 1065, 1097
AleI CACNNNNGTG 1 cut(s) 908
Alw21I GWGCWC 3 cut(s) 382, 807, 1834
Alw26I GTCTC 3 cut(s) 1201, 1416, 1846
Ama87I CYCGRG 2 cut(s) 143, 1849
AoxI GGCC 1 cut(s) 1922
ApeKI GCWGC 2 cut(s) 758, 1225
ApoI RAATTY 5 cut(s) 415, 470, 634, 1457, 1885
Asp700I GAANNNNTTC 3 cut(s) 419, 1012, 1806
AspS9I GGNCC 1 cut(s) 1001
AsuC2I CCSGG 3 cut(s) 144, 145, 874
AsuHPI GGTGA 8 cut(s) 149, 1082, 1144, 1160, 1295, 1487, 1787, 1887
AvaI CYCGRG 2 cut(s) 143, 1849
AvaII GGWCC 1 cut(s) 1001
AxyI CCTNAGG 1 cut(s) 681
BamHI GGATCC 2 cut(s) 499, 1872
BanI GGYRCC 2 cut(s) 253, 1555
BanII GRGCYC 2 cut(s) 382, 807
BarI GAAGNNNNNNTAC 2 cut(s) 422, 454
BauI CACGAG 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 1799
Bbv12I GWGCWC 3 cut(s) 382, 807, 1834
BbvI GCAGC 2 cut(s) 745, 1237
BccI CCATC 4 cut(s) 179, 335, 489, 739
BciT130I CCWGG 1 cut(s) 492
BclI TGATCA 1 cut(s) 1746
BcnI CCSGG 3 cut(s) 144, 145, 874
BcoDI GTCTC 3 cut(s) 1201, 1416, 1846
BcuI ACTAGT 1 cut(s) 850
BfaI CTAG 5 cut(s) 458, 851, 1067, 1625, 1706
BfuAI ACCTGC 1 cut(s) 397
BglII AGATCT 1 cut(s) 609
BisI GCNGC 3 cut(s) 759, 762, 1226
BlsI GCNGC 3 cut(s) 760, 763, 1227
Bme1390I CCNGG 4 cut(s) 144, 145, 492, 874
Bme18I GGWCC 1 cut(s) 1001
BmeT110I CYCGRG 2 cut(s) 143, 1849
BmgT120I GGNCC 1 cut(s) 1001
BmiI GGNNCC 5 cut(s) 255, 501, 1516, 1557, 1874
BmrFI CCNGG 4 cut(s) 144, 145, 492, 874
BmsI GCATC 3 cut(s) 157, 310, 2019
BpiI GAAGAC 1 cut(s) 1799
Bpu10I CCTNAGC 1 cut(s) 720
BpuEI CTTGAG 1 cut(s) 1036
BpuMI CCSGG 3 cut(s) 144, 145, 874
Bsa29I ATCGAT 2 cut(s) 318, 971
BsaI GGTCTC 1 cut(s) 1846
BsaJI CCNNGG 4 cut(s) 143, 144, 160, 909
BsaWI WCCGGW 1 cut(s) 1145
BsaXI ACNNNNNCTCC 2 cut(s) 1980, 2010
Bsc4I CCNNNNNNNGG 4 cut(s) 721, 840, 991, 1525
Bse1I ACTGG 2 cut(s) 280, 300
Bse21I CCTNAGG 1 cut(s) 681
Bse3DI GCAATG 1 cut(s) 1898
BseBI CCWGG 1 cut(s) 492
BseCI ATCGAT 2 cut(s) 318, 971
BseDI CCNNGG 4 cut(s) 143, 144, 160, 909
BseGI GGATG 3 cut(s) 172, 500, 1834
BseLI CCNNNNNNNGG 4 cut(s) 721, 840, 991, 1525
BseMI GCAATG 1 cut(s) 1898
BseMII CTCAG 6 cut(s) 236, 411, 820, 1196, 1986, 2019
BseNI ACTGG 2 cut(s) 280, 300
BseRI GAGGAG 1 cut(s) 31
BseXI GCAGC 2 cut(s) 745, 1237
BseYI CCCAGC 1 cut(s) 764
BsgI GTGCAG 2 cut(s) 1244, 1400
BshFI GGCC 1 cut(s) 1924
BshNI GGYRCC 2 cut(s) 253, 1555
BshVI ATCGAT 2 cut(s) 318, 971
BsiHKAI GWGCWC 3 cut(s) 382, 807, 1834
BsiHKCI CYCGRG 2 cut(s) 143, 1849
BsiSI CCGG 3 cut(s) 144, 873, 1146
BslFI GGGAC 3 cut(s) 161, 781, 1352
BslI CCNNNNNNNGG 4 cut(s) 721, 840, 991, 1525
BsmAI GTCTC 3 cut(s) 1201, 1416, 1846
BsmFI GGGAC 3 cut(s) 161, 781, 1352
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 1 cut(s) 1924
Bso31I GGTCTC 1 cut(s) 1846
BsoBI CYCGRG 2 cut(s) 143, 1849
Bsp1286I GDGCHC 3 cut(s) 382, 807, 1834
BspACI CCGC 3 cut(s) 455, 762, 1130
BspANI GGCC 1 cut(s) 1924
BspCNI CTCAG 6 cut(s) 235, 410, 819, 1197, 1985, 2018
BspDI ATCGAT 2 cut(s) 318, 971
BspHI TCATGA 2 cut(s) 1390, 1881
BspLI GGNNCC 5 cut(s) 255, 501, 1516, 1557, 1874
BspMI ACCTGC 1 cut(s) 397
BspT107I GGYRCC 2 cut(s) 253, 1555
BspTNI GGTCTC 1 cut(s) 1846
BsrDI GCAATG 1 cut(s) 1898
BsrI ACTGG 2 cut(s) 280, 300
BssECI CCNNGG 4 cut(s) 143, 144, 160, 909
BssSI CACGAG 1 cut(s) 1220
Bst2BI CACGAG 1 cut(s) 1220
Bst2UI CCWGG 1 cut(s) 492
Bst4CI ACNGT 4 cut(s) 193, 910, 1454, 1676
Bst6I CTCTTC 3 cut(s) 86, 1694, 1913
BstC8I GCNNGC 1 cut(s) 577
BstDEI CTNAG 8 cut(s) 222, 397, 681, 720, 806, 1205, 1972, 2005
BstDSI CCRYGG 2 cut(s) 160, 909
BstENI CCTNNNNNAGG 1 cut(s) 719
BstF5I GGATG 3 cut(s) 172, 500, 1834
BstMAI GTCTC 3 cut(s) 1201, 1416, 1846
BstMWI GCNNNNNNNGC 1 cut(s) 585
BstNI CCWGG 1 cut(s) 492
BstSCI CCNGG 4 cut(s) 142, 143, 490, 872
BstV1I GCAGC 2 cut(s) 745, 1237
BstV2I GAAGAC 1 cut(s) 1799
BstX2I RGATCY 5 cut(s) 499, 515, 609, 1024, 1872
BstXI CCANNNNNNTGG 1 cut(s) 1511
BstYI RGATCY 5 cut(s) 499, 515, 609, 1024, 1872
Bsu15I ATCGAT 2 cut(s) 318, 971
Bsu36I CCTNAGG 1 cut(s) 681
BsuRI GGCC 1 cut(s) 1924
BsuTUI ATCGAT 2 cut(s) 318, 971
BtgI CCRYGG 2 cut(s) 160, 909
BtsCI GGATG 3 cut(s) 172, 500, 1834
BtsIMutI CAGTG 3 cut(s) 198, 1459, 1681
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 1 cut(s) 577
CciI TCATGA 2 cut(s) 1390, 1881
Cfr13I GGNCC 1 cut(s) 1001
Cfr9I CCCGGG 1 cut(s) 143
ClaI ATCGAT 2 cut(s) 318, 971
Csp6I GTAC 4 cut(s) 1348, 1412, 1549, 1659
CspCI CAANNNNNGTGG 2 cut(s) 894, 929
CviQI GTAC 4 cut(s) 1348, 1412, 1549, 1659
DdeI CTNAG 8 cut(s) 222, 397, 681, 720, 806, 1205, 1972, 2005
DraI TTTAAA 1 cut(s) 1179
Eam1104I CTCTTC 3 cut(s) 86, 1694, 1913
EarI CTCTTC 3 cut(s) 86, 1694, 1913
Ecl136II GAGCTC 2 cut(s) 380, 805
Eco147I AGGCCT 1 cut(s) 1924
Eco24I GRGCYC 2 cut(s) 382, 807
Eco31I GGTCTC 1 cut(s) 1846
Eco32I GATATC 1 cut(s) 969
Eco47I GGWCC 1 cut(s) 1001
Eco53kI GAGCTC 2 cut(s) 380, 805
Eco57I CTGAAG 1 cut(s) 270
Eco81I CCTNAGG 1 cut(s) 681
Eco88I CYCGRG 2 cut(s) 143, 1849
EcoICRI GAGCTC 2 cut(s) 380, 805
EcoNI CCTNNNNNAGG 1 cut(s) 719
EcoRI GAATTC 1 cut(s) 1457
EcoRII CCWGG 1 cut(s) 490
EcoRV GATATC 1 cut(s) 969
EcoT38I GRGCYC 2 cut(s) 382, 807
FalI AAGNNNNNCTT 4 cut(s) 631, 663, 685, 717
FaqI GGGAC 3 cut(s) 161, 781, 1352
FbaI TGATCA 1 cut(s) 1746
Fnu4HI GCNGC 3 cut(s) 759, 762, 1226
FokI GGATG 3 cut(s) 179, 507, 1821
FriOI GRGCYC 2 cut(s) 382, 807
Fsp4HI GCNGC 3 cut(s) 759, 762, 1226
FspBI CTAG 5 cut(s) 458, 851, 1067, 1625, 1706
GluI GCNGC 3 cut(s) 759, 762, 1226
GsaI CCCAGC 1 cut(s) 768
HaeIII GGCC 1 cut(s) 1924
HapII CCGG 3 cut(s) 144, 873, 1146
HincII GTYRAC 1 cut(s) 1978
HindII GTYRAC 1 cut(s) 1978
HinfI GANTC 9 cut(s) 101, 265, 351, 620, 1047, 1151, 1592, 1702, 1892
HpaI GTTAAC 1 cut(s) 1978
HpaII CCGG 3 cut(s) 144, 873, 1146
HphI GGTGA 8 cut(s) 149, 1082, 1144, 1160, 1295, 1487, 1787, 1887
Hpy166II GTNNAC 5 cut(s) 196, 423, 1412, 1661, 1978
Hpy188I TCNGA 6 cut(s) 289, 429, 676, 736, 888, 1597
Hpy188III TCNNGA 7 cut(s) 176, 412, 1391, 1838, 1851, 1882, 1945
Hpy8I GTNNAC 5 cut(s) 196, 423, 1412, 1661, 1978
HpyAV CCTTC 5 cut(s) 244, 319, 1067, 1091, 1866
HpyCH4III ACNGT 4 cut(s) 193, 910, 1454, 1676
HpyCH4IV ACGT 4 cut(s) 479, 890, 1657, 2000
HpyCH4V TGCA 6 cut(s) 170, 392, 575, 605, 1225, 1417
HpyF10VI GCNNNNNNNGC 1 cut(s) 585
HpyF3I CTNAG 8 cut(s) 222, 397, 681, 720, 806, 1205, 1972, 2005
HpySE526I ACGT 4 cut(s) 479, 890, 1657, 2000
Ksp22I TGATCA 1 cut(s) 1746
KspAI GTTAAC 1 cut(s) 1978
LmnI GCTCC 5 cut(s) 373, 377, 802, 1085, 1723
Lsp1109I GCAGC 2 cut(s) 745, 1237
LweI GCATC 3 cut(s) 157, 310, 2019
MaeI CTAG 5 cut(s) 458, 851, 1067, 1625, 1706
MaeII ACGT 4 cut(s) 479, 890, 1657, 2000
MaeIII GTNAC 6 cut(s) 625, 643, 921, 1633, 1893, 1996
MflI RGATCY 5 cut(s) 499, 515, 609, 1024, 1872
MhlI GDGCHC 3 cut(s) 382, 807, 1834
MlyI GAGTC 3 cut(s) 274, 1711, 1901
MmeI TCCRAC 3 cut(s) 212, 493, 579
MroXI GAANNNNTTC 3 cut(s) 419, 1012, 1806
MseI TTAA 6 cut(s) 483, 638, 1178, 1188, 1977, 2026
MslI CAYNNNNRTG 2 cut(s) 165, 908
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 3 cut(s) 144, 873, 1146
MspR9I CCNGG 4 cut(s) 144, 145, 492, 874
Mva1269I GAATGC 1 cut(s) 577
MvaI CCWGG 1 cut(s) 492
MwoI GCNNNNNNNGC 1 cut(s) 585
NciI CCSGG 3 cut(s) 144, 145, 874
NlaIV GGNNCC 5 cut(s) 255, 501, 1516, 1557, 1874
NmeAIII GCCGAG 1 cut(s) 1471
NmuCI GTSAC 5 cut(s) 625, 643, 921, 1633, 1893
OliI CACNNNNGTG 1 cut(s) 908
PaeR7I CTCGAG 1 cut(s) 1849
PagI TCATGA 2 cut(s) 1390, 1881
PceI AGGCCT 1 cut(s) 1924
PcsI WCGNNNNNNNCGW 1 cut(s) 1856
PctI GAATGC 1 cut(s) 577
PdmI GAANNNNTTC 3 cut(s) 419, 1012, 1806
PfeI GAWTC 6 cut(s) 101, 351, 620, 1047, 1151, 1592
PfoI TCCNGGA 1 cut(s) 490
PkrI GCNGC 3 cut(s) 760, 763, 1227
PleI GAGTC 3 cut(s) 273, 1710, 1900
PpsI GAGTC 3 cut(s) 273, 1710, 1900
PsiI TTATAA 1 cut(s) 1020
Psp124BI GAGCTC 2 cut(s) 382, 807
Psp1406I AACGTT 1 cut(s) 2000
Psp6I CCWGG 1 cut(s) 490
PspFI CCCAGC 1 cut(s) 764
PspGI CCWGG 1 cut(s) 490
PspN4I GGNNCC 5 cut(s) 255, 501, 1516, 1557, 1874
PspPI GGNCC 1 cut(s) 1001
PsuI RGATCY 5 cut(s) 499, 515, 609, 1024, 1872
RsaI GTAC 4 cut(s) 1349, 1413, 1550, 1660
RsaNI GTAC 4 cut(s) 1348, 1412, 1549, 1659
RseI CAYNNNNRTG 2 cut(s) 165, 908
SacI GAGCTC 2 cut(s) 382, 807
SaqAI TTAA 6 cut(s) 483, 638, 1178, 1188, 1977, 2026
SatI GCNGC 3 cut(s) 759, 762, 1226
Sau96I GGNCC 1 cut(s) 1001
SchI GAGTC 3 cut(s) 274, 1711, 1901
ScrFI CCNGG 4 cut(s) 144, 145, 492, 874
SduI GDGCHC 3 cut(s) 382, 807, 1834
SfaNI GCATC 3 cut(s) 157, 310, 2019
Sfr274I CTCGAG 1 cut(s) 1849
SinI GGWCC 1 cut(s) 1001
SlaI CTCGAG 1 cut(s) 1849
SmaI CCCGGG 1 cut(s) 145
SmiMI CAYNNNNRTG 2 cut(s) 165, 908
SmlI CTYRAG 2 cut(s) 1051, 1849
SmoI CTYRAG 2 cut(s) 1051, 1849
SpeI ACTAGT 1 cut(s) 850
SseBI AGGCCT 1 cut(s) 1924
SsiI CCGC 3 cut(s) 455, 762, 1130
SspMI CTAG 5 cut(s) 458, 851, 1067, 1625, 1706
SstI GAGCTC 2 cut(s) 382, 807
StuI AGGCCT 1 cut(s) 1924
StyD4I CCNGG 4 cut(s) 142, 143, 490, 872
TaaI ACNGT 4 cut(s) 193, 910, 1454, 1676
TaiI ACGT 4 cut(s) 482, 893, 1660, 2003
TatI WGTACW 1 cut(s) 1411
TauI GCSGC 1 cut(s) 764
TfiI GAWTC 6 cut(s) 101, 351, 620, 1047, 1151, 1592
Tru1I TTAA 6 cut(s) 483, 638, 1178, 1188, 1977, 2026
Tru9I TTAA 6 cut(s) 483, 638, 1178, 1188, 1977, 2026
TscAI CASTG 3 cut(s) 198, 1459, 1681
TseFI GTSAC 5 cut(s) 625, 643, 921, 1633, 1893
TseI GCWGC 2 cut(s) 758, 1225
Tsp45I GTSAC 5 cut(s) 625, 643, 921, 1633, 1893
TspGWI ACGGA 2 cut(s) 613, 940
TspMI CCCGGG 1 cut(s) 143
TspRI CASTG 3 cut(s) 198, 1459, 1681
VpaK11BI GGWCC 1 cut(s) 1001
XagI CCTNNNNNAGG 1 cut(s) 719
XapI RAATTY 5 cut(s) 415, 470, 634, 1457, 1885
XhoI CTCGAG 1 cut(s) 1849
XmaI CCCGGG 1 cut(s) 143
XmnI GAANNNNTTC 3 cut(s) 419, 1012, 1806
XspI CTAG 5 cut(s) 458, 851, 1067, 1625, 1706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.