Rh5CG288700

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
31592687 .. 31608563
15877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG288700.1

Sequence Viewer

Length: 1296 bp
ATGGTTGTCAATCACTCCGGTGACATGAGATCAATATGGTCAGGAAAACTTCGATTCCTTCTTGCACCAAGACTGTGTCTCTTGATCTTTCTCTTCTGTCCTTCTGCAACTCCATTAAGCTTTACTTTCCCGAGCTTTAATCAAGATGATGATATTGCCAAAATAATTCGAAATGGAAGCGCTTCTGTTTACACCGAATTTCTCTACCTCACCAGATACGCAGCAGACCAGCAACAGGGTGGAGTTGGTCGAGCTACCTACAAGCAGCCCTTCCTGCTCCAAGAAAATACCACCGGAAAACTCGCCGATTTCACCACAAATTTTACATTCTCCATTTATGCGCCAAATGAATTGGTTGCCGGTGATGGACTAGCCTTCTTCTTAGCCCCAAATGGGTCCGAACTCGACAGCTCAGCAGACGGCGGCGGCGCTCTCGGCCTCCCCGGCAATCATCGGTACCCATTTGTGGCGGTGGAATTTGATATCCACCAGAACACAGAATGGAACACAAATGAAACCCTCAACGACCCACCCGGAGATCATGTGGGTATCGACGTCAACTCTGTCATCAAGTCGTTGGATTTCATGCCTTGGAATGGTAGTATTATCAATGCACAAAACAATGATGTCCGGATCAGTTATAGTTCTAGCACAAAAAATCTTAGCGTTGCCTTCACAACCTTTTTGATGAATGGTACCAAAAAGATGAGCTATATTTCTCACACAGTCGATCTGAAGAAGATCTTAACGGATCCGGTCATTGTTGGGTTCTCGGCTTCAACAGGTAGCGCTACTGCTATATTTAAGATCGTCTCGTGGAATTTTACTTCAACTCCTCTGGTTGATGAGACTGCCAGGGACAACACTCCGGTGAGTGTACCTGCTCCTGCGCCTAGCCATAGGGCTAGTCCTAATCCCAACTCCGGCAATAAAGCACTAGTTGTTGGGTTGGGGGTTGGTGCAAGTATTATTCTAGTTGGTGGGTTGGCTTTGGTCTTCTTTATCTTTTGGAAGAAGAAAGAAACGACGGACAGTGATGAAGATCCTATCGTTGGTGATGCCACTGACGATGAATTTGAACAAGGGACCGGTCCCAGAAAGTTTTTGTACGACGATTTAGTCCGGGCAACTGCAATCCGGCCTCAGTTTCTATCACGACTACAGAATCAAGCAAGGTCTCTCTATCACTGCCCTAAATTGGTGATTTCTGTTCGTCTCAGTCAGGTGAAGAAGAAAAGTTACAACTTTGATGCACTATTATCATCGCTAATTATTCCTGGGATTGGTCTTGGATAG

Protein Analysis

431

Amino Acids

46.93

Weight (kDa)

5.99

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 286 9e-58 Legume lectin domain
Lectin_L-type_dom PF18483 58 - 266 1e-11 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1118
AatII GACGTC 1 cut(s) 558
Acc36I ACCTGC 1 cut(s) 889
Acc65I GGTACC 2 cut(s) 456, 695
AccB1I GGYRCC 2 cut(s) 456, 695
AccIII TCCGGA 1 cut(s) 630
AciI CCGC 3 cut(s) 423, 426, 470
AclWI GGATC 4 cut(s) 641, 746, 759, 1037
AcsI RAATTY 5 cut(s) 197, 319, 476, 820, 1073
AcuI CTGAAG 1 cut(s) 755
AcyI GRCGYC 1 cut(s) 555
AfaI GTAC 4 cut(s) 458, 697, 879, 1109
AfeI AGCGCT 2 cut(s) 181, 790
AfiI CCNNNNNNNGG 8 cut(s) 235, 393, 466, 596, 923, 1052, 1198, 1283
AgeI ACCGGT 1 cut(s) 1088
AgsI TTSAA 3 cut(s) 780, 831, 1079
AhlI ACTAGT 1 cut(s) 937
AjnI CCWGG 2 cut(s) 854, 1276
AleI CACNNNNGTG 2 cut(s) 18, 869
AluBI AGCT 5 cut(s) 120, 135, 254, 411, 711
AluI AGCT 5 cut(s) 120, 135, 254, 411, 711
Alw26I GTCTC 5 cut(s) 83, 817, 842, 1182, 1220
AlwI GGATC 4 cut(s) 641, 746, 759, 1037
Ama87I CYCGRG 1 cut(s) 130
Aor13HI TCCGGA 1 cut(s) 630
Aor51HI AGCGCT 2 cut(s) 181, 790
AoxI GGCC 2 cut(s) 436, 1139
ApeKI GCWGC 2 cut(s) 221, 265
ApoI RAATTY 5 cut(s) 197, 319, 476, 820, 1073
ArsI GACNNNNNNTTYG 2 cut(s) 1058, 1090
AsiGI ACCGGT 1 cut(s) 1088
Asp700I GAANNNNTTC 1 cut(s) 181
Asp718I GGTACC 2 cut(s) 456, 695
AspLEI GCGC 5 cut(s) 182, 343, 431, 791, 892
AspS9I GGNCC 3 cut(s) 396, 1086, 1091
AsuC2I CCSGG 3 cut(s) 444, 534, 1124
AsuHPI GGTGA 8 cut(s) 32, 202, 304, 374, 883, 1067, 1213, 1237
AsuII TTCGAA 1 cut(s) 169
AvaI CYCGRG 1 cut(s) 130
AvaII GGWCC 3 cut(s) 396, 1086, 1091
BamHI GGATCC 1 cut(s) 751
BanI GGYRCC 2 cut(s) 456, 695
BarI GAAGNNNNNNTAC 2 cut(s) 1223, 1255
BauI CACGAG 1 cut(s) 814
BbsI GAAGAC 1 cut(s) 988
BbvI GCAGC 2 cut(s) 233, 277
BccI CCATC 1 cut(s) 359
BceAI ACGGC 1 cut(s) 436
BciT130I CCWGG 2 cut(s) 856, 1278
BcnI CCSGG 3 cut(s) 444, 534, 1124
BcoDI GTCTC 5 cut(s) 83, 817, 842, 1182, 1220
BcuI ACTAGT 1 cut(s) 937
BfaI CTAG 6 cut(s) 371, 648, 894, 906, 938, 974
BfmI CTRYAG 1 cut(s) 1160
BfoI RGCGCY 3 cut(s) 183, 432, 792
BfuAI ACCTGC 1 cut(s) 889
BglI GCCNNNNNGGC 1 cut(s) 444
BglII AGATCT 1 cut(s) 741
BisI GCNGC 4 cut(s) 222, 266, 424, 427
BlpI GCTNAGC 1 cut(s) 412
BlsI GCNGC 4 cut(s) 223, 267, 425, 428
Bme1390I CCNGG 5 cut(s) 444, 534, 856, 1124, 1278
Bme18I GGWCC 3 cut(s) 396, 1086, 1091
BmeT110I CYCGRG 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 396, 1086, 1091
BmiI GGNNCC 6 cut(s) 397, 458, 697, 753, 1087, 1093
BmrFI CCNGG 5 cut(s) 444, 534, 856, 1124, 1278
BmsI GCATC 2 cut(s) 1048, 1240
BpiI GAAGAC 1 cut(s) 988
Bpu1102I GCTNAGC 1 cut(s) 412
Bpu14I TTCGAA 1 cut(s) 169
BpuMI CCSGG 3 cut(s) 444, 534, 1124
BsaBI GATNNNNATC 1 cut(s) 1041
BsaHI GRCGYC 1 cut(s) 555
BsaI GGTCTC 1 cut(s) 1182
BsaJI CCNNGG 4 cut(s) 442, 590, 855, 1277
BsaWI WCCGGW 6 cut(s) 17, 293, 630, 754, 868, 1088
BsaXI ACNNNNNCTCC 4 cut(s) 528, 558, 817, 847
Bsc4I CCNNNNNNNGG 8 cut(s) 235, 393, 466, 596, 923, 1052, 1198, 1283
Bse118I RCCGGY 2 cut(s) 359, 1088
Bse8I GATNNNNATC 1 cut(s) 1041
BseAI TCCGGA 1 cut(s) 630
BseBI CCWGG 2 cut(s) 856, 1278
BseDI CCNNGG 4 cut(s) 442, 590, 855, 1277
BseJI GATNNNNATC 1 cut(s) 1041
BseLI CCNNNNNNNGG 8 cut(s) 235, 393, 466, 596, 923, 1052, 1198, 1283
BseMII CTCAG 3 cut(s) 426, 1157, 1231
BseRI GAGGAG 1 cut(s) 825
BseXI GCAGC 2 cut(s) 233, 277
BshFI GGCC 2 cut(s) 438, 1141
BshNI GGYRCC 2 cut(s) 456, 695
BshTI ACCGGT 1 cut(s) 1088
BsiHKCI CYCGRG 1 cut(s) 130
BslFI GGGAC 3 cut(s) 872, 1077, 1099
BslI CCNNNNNNNGG 8 cut(s) 235, 393, 466, 596, 923, 1052, 1198, 1283
BsmAI GTCTC 5 cut(s) 83, 817, 842, 1182, 1220
BsmBI CGTCTC 2 cut(s) 817, 1220
BsmFI GGGAC 3 cut(s) 872, 1077, 1099
BsnI GGCC 2 cut(s) 438, 1141
Bso31I GGTCTC 1 cut(s) 1182
BsoBI CYCGRG 1 cut(s) 130
Bsp119I TTCGAA 1 cut(s) 169
Bsp13I TCCGGA 1 cut(s) 630
Bsp143I GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
Bsp1720I GCTNAGC 1 cut(s) 412
BspACI CCGC 3 cut(s) 423, 426, 470
BspANI GGCC 2 cut(s) 438, 1141
BspCNI CTCAG 3 cut(s) 425, 1156, 1230
BspEI TCCGGA 1 cut(s) 630
BspLI GGNNCC 6 cut(s) 397, 458, 697, 753, 1087, 1093
BspMI ACCTGC 1 cut(s) 889
BspPI GGATC 4 cut(s) 641, 746, 759, 1037
BspT104I TTCGAA 1 cut(s) 169
BspT107I GGYRCC 2 cut(s) 456, 695
BspTNI GGTCTC 1 cut(s) 1182
BsrFI RCCGGY 2 cut(s) 359, 1088
BssAI RCCGGY 2 cut(s) 359, 1088
BssECI CCNNGG 4 cut(s) 442, 590, 855, 1277
BssMI GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
BssNI GRCGYC 1 cut(s) 555
BssSI CACGAG 1 cut(s) 814
BssT1I CCWWGG 1 cut(s) 590
Bst2BI CACGAG 1 cut(s) 814
Bst2UI CCWGG 2 cut(s) 856, 1278
Bst4CI ACNGT 3 cut(s) 75, 727, 1034
Bst6I CTCTTC 1 cut(s) 98
BstACI GRCGYC 1 cut(s) 555
BstBI TTCGAA 1 cut(s) 169
BstDEI CTNAG 5 cut(s) 382, 412, 662, 1143, 1217
BstH2I RGCGCY 3 cut(s) 183, 432, 792
BstHHI GCGC 5 cut(s) 182, 343, 431, 791, 892
BstKTI GATC 9 cut(s) 32, 87, 541, 636, 733, 744, 754, 810, 1045
BstMAI GTCTC 5 cut(s) 83, 817, 842, 1182, 1220
BstMBI GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
BstMWI GCNNNNNNNGC 3 cut(s) 274, 435, 444
BstNI CCWGG 2 cut(s) 856, 1278
BstSCI CCNGG 5 cut(s) 442, 532, 854, 1122, 1276
BstSFI CTRYAG 1 cut(s) 1160
BstV1I GCAGC 2 cut(s) 233, 277
BstV2I GAAGAC 1 cut(s) 988
BstX2I RGATCY 3 cut(s) 741, 751, 1042
BstYI RGATCY 3 cut(s) 741, 751, 1042
BsuRI GGCC 2 cut(s) 438, 1141
BtgZI GCGATG 1 cut(s) 1248
BtsI GCAGTG 1 cut(s) 1186
BtsIMutI CAGTG 3 cut(s) 1039, 1062, 1186
BveI ACCTGC 1 cut(s) 889
CfoI GCGC 5 cut(s) 182, 343, 431, 791, 892
Cfr10I RCCGGY 2 cut(s) 359, 1088
Cfr13I GGNCC 3 cut(s) 396, 1086, 1091
Csp6I GTAC 4 cut(s) 457, 696, 878, 1108
CspAI ACCGGT 1 cut(s) 1088
CviAII CATG 3 cut(s) 25, 542, 586
CviQI GTAC 4 cut(s) 457, 696, 878, 1108
DdeI CTNAG 5 cut(s) 382, 412, 662, 1143, 1217
DpnI GATC 9 cut(s) 31, 86, 540, 635, 732, 743, 753, 809, 1044
DpnII GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
DrdI GACNNNNNNGTC 1 cut(s) 1118
DseDI GACNNNNNNGTC 1 cut(s) 1118
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 590
Eco31I GGTCTC 1 cut(s) 1182
Eco32I GATATC 1 cut(s) 484
Eco47I GGWCC 3 cut(s) 396, 1086, 1091
Eco47III AGCGCT 2 cut(s) 181, 790
Eco57I CTGAAG 1 cut(s) 755
Eco88I CYCGRG 1 cut(s) 130
EcoRII CCWGG 2 cut(s) 854, 1276
EcoRV GATATC 1 cut(s) 484
EcoT14I CCWWGG 1 cut(s) 590
ErhI CCWWGG 1 cut(s) 590
Esp3I CGTCTC 2 cut(s) 817, 1220
FaeI CATG 3 cut(s) 28, 545, 589
FaiI YATR 9 cut(s) 26, 37, 339, 543, 587, 642, 714, 800, 900
FalI AAGNNNNNCTT 6 cut(s) 109, 141, 254, 286, 728, 760
FaqI GGGAC 3 cut(s) 872, 1077, 1099
FatI CATG 3 cut(s) 24, 541, 585
Fnu4HI GCNGC 4 cut(s) 222, 266, 424, 427
Fsp4HI GCNGC 4 cut(s) 222, 266, 424, 427
FspBI CTAG 6 cut(s) 371, 648, 894, 906, 938, 974
GlaI GCGC 5 cut(s) 181, 342, 430, 790, 891
GluI GCNGC 4 cut(s) 222, 266, 424, 427
HaeII RGCGCY 3 cut(s) 183, 432, 792
HaeIII GGCC 2 cut(s) 438, 1141
HhaI GCGC 5 cut(s) 182, 343, 431, 791, 892
Hin1I GRCGYC 1 cut(s) 555
Hin1II CATG 3 cut(s) 28, 545, 589
Hin6I GCGC 5 cut(s) 180, 341, 429, 789, 890
HinP1I GCGC 5 cut(s) 180, 341, 429, 789, 890
HincII GTYRAC 1 cut(s) 559
HindII GTYRAC 1 cut(s) 559
HindIII AAGCTT 1 cut(s) 118
HinfI GANTC 2 cut(s) 54, 1165
HphI GGTGA 8 cut(s) 32, 202, 304, 374, 883, 1067, 1213, 1237
Hpy166II GTNNAC 3 cut(s) 190, 559, 878
Hpy188I TCNGA 2 cut(s) 400, 735
Hpy188III TCNNGA 6 cut(s) 42, 82, 130, 143, 631, 1155
Hpy8I GTNNAC 3 cut(s) 190, 559, 878
Hpy99I CGWCG 3 cut(s) 557, 1030, 1115
HpyAV CCTTC 5 cut(s) 68, 111, 280, 385, 682
HpyCH4III ACNGT 3 cut(s) 75, 727, 1034
HpyCH4IV ACGT 1 cut(s) 555
HpyCH4V TGCA 6 cut(s) 65, 107, 614, 962, 1133, 1253
HpyF10VI GCNNNNNNNGC 3 cut(s) 274, 435, 444
HpyF3I CTNAG 5 cut(s) 382, 412, 662, 1143, 1217
HpySE526I ACGT 1 cut(s) 555
Hsp92I GRCGYC 1 cut(s) 555
Hsp92II CATG 3 cut(s) 28, 545, 589
HspAI GCGC 5 cut(s) 180, 341, 429, 789, 890
Kpn2I TCCGGA 1 cut(s) 630
KpnI GGTACC 2 cut(s) 460, 699
Kzo9I GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
LmnI GCTCC 2 cut(s) 282, 889
Lsp1109I GCAGC 2 cut(s) 233, 277
LweI GCATC 2 cut(s) 1048, 1240
MaeI CTAG 6 cut(s) 371, 648, 894, 906, 938, 974
MaeII ACGT 1 cut(s) 555
MaeIII GTNAC 2 cut(s) 20, 1238
MalI GATC 9 cut(s) 31, 86, 540, 635, 732, 743, 753, 809, 1044
MboI GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
MflI RGATCY 3 cut(s) 741, 751, 1042
MluCI AATT 9 cut(s) 165, 197, 319, 350, 476, 820, 1073, 1196, 1269
MmeI TCCRAC 1 cut(s) 558
MnlI CCTC 5 cut(s) 218, 449, 530, 846, 1152
MroI TCCGGA 1 cut(s) 630
MroXI GAANNNNTTC 1 cut(s) 181
MseI TTAA 4 cut(s) 116, 138, 746, 804
MslI CAYNNNNRTG 2 cut(s) 18, 869
MspR9I CCNGG 5 cut(s) 444, 534, 856, 1124, 1278
MvaI CCWGG 2 cut(s) 856, 1278
MwoI GCNNNNNNNGC 3 cut(s) 274, 435, 444
NciI CCSGG 3 cut(s) 444, 534, 1124
NdeII GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
NlaIII CATG 3 cut(s) 28, 545, 589
NlaIV GGNNCC 6 cut(s) 397, 458, 697, 753, 1087, 1093
NmeAIII GCCGAG 2 cut(s) 414, 752
NmuCI GTSAC 1 cut(s) 20
NspV TTCGAA 1 cut(s) 169
OliI CACNNNNGTG 2 cut(s) 18, 869
PdmI GAANNNNTTC 1 cut(s) 181
PfeI GAWTC 2 cut(s) 54, 1165
PflFI GACNNNGTC 1 cut(s) 75
PinAI ACCGGT 1 cut(s) 1088
PkrI GCNGC 4 cut(s) 223, 267, 425, 428
Psp6I CCWGG 2 cut(s) 854, 1276
PspGI CCWGG 2 cut(s) 854, 1276
PspN4I GGNNCC 6 cut(s) 397, 458, 697, 753, 1087, 1093
PspPI GGNCC 3 cut(s) 396, 1086, 1091
PsuI RGATCY 3 cut(s) 741, 751, 1042
PsyI GACNNNGTC 1 cut(s) 75
RsaI GTAC 4 cut(s) 458, 697, 879, 1109
RsaNI GTAC 4 cut(s) 457, 696, 878, 1108
RseI CAYNNNNRTG 2 cut(s) 18, 869
SaqAI TTAA 4 cut(s) 116, 138, 746, 804
SatI GCNGC 4 cut(s) 222, 266, 424, 427
Sau3AI GATC 9 cut(s) 29, 84, 538, 633, 730, 741, 751, 807, 1042
Sau96I GGNCC 3 cut(s) 396, 1086, 1091
ScrFI CCNGG 5 cut(s) 444, 534, 856, 1124, 1278
SfaNI GCATC 2 cut(s) 1048, 1240
SfcI CTRYAG 1 cut(s) 1160
SfuI TTCGAA 1 cut(s) 169
SinI GGWCC 3 cut(s) 396, 1086, 1091
SmiMI CAYNNNNRTG 2 cut(s) 18, 869
SpeI ACTAGT 1 cut(s) 937
Sse9I AATT 9 cut(s) 165, 197, 319, 350, 476, 820, 1073, 1196, 1269
SsiI CCGC 3 cut(s) 423, 426, 470
SspMI CTAG 6 cut(s) 371, 648, 894, 906, 938, 974
StyD4I CCNGG 5 cut(s) 442, 532, 854, 1122, 1276
StyI CCWWGG 1 cut(s) 590
TaaI ACNGT 3 cut(s) 75, 727, 1034
TaiI ACGT 1 cut(s) 558
TaqI TCGA 6 cut(s) 52, 169, 250, 405, 552, 729
TasI AATT 9 cut(s) 165, 197, 319, 350, 476, 820, 1073, 1196, 1269
TauI GCSGC 2 cut(s) 426, 429
TfiI GAWTC 2 cut(s) 54, 1165
Tru1I TTAA 4 cut(s) 116, 138, 746, 804
Tru9I TTAA 4 cut(s) 116, 138, 746, 804
TscAI CASTG 3 cut(s) 1039, 1069, 1193
TseFI GTSAC 1 cut(s) 20
TseI GCWGC 2 cut(s) 221, 265
Tsp45I GTSAC 1 cut(s) 20
TspDTI ATGAA 6 cut(s) 363, 528, 574, 704, 1053, 1086
TspGWI ACGGA 2 cut(s) 764, 1043
TspRI CASTG 3 cut(s) 1039, 1069, 1193
Tth111I GACNNNGTC 1 cut(s) 75
VpaK11BI GGWCC 3 cut(s) 396, 1086, 1091
XapI RAATTY 5 cut(s) 197, 319, 476, 820, 1073
XcmI CCANNNNNNNNNTGG 1 cut(s) 236
XmnI GAANNNNTTC 1 cut(s) 181
XspI CTAG 6 cut(s) 371, 648, 894, 906, 938, 974
ZraI GACGTC 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.