pycom03g18070

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
19124187 .. 19125677
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g18070.1

Sequence Viewer

Length: 1491 bp
ATGGTTGATCTGAATAAATGCTTGCCGGATTGGGTCATCGTTGGCTTTTCTGCTTCAACAGGTGCTTCTTCTGCTCTGCACATCACCATGTGGAATTTCACTTCTACTCTGGTTGATGATGAATCTCTAACTCTTTCGGGGGAACAAAAAAAGCAAGAGTCTCCAGTTCCAACGCCAGGCCATAGTTCTAAAGCCAAGTCAAGAAAACGCAAGAAATCTCTGGCGGTGATTATCGGTAGTACTACTGGTAGTGGTGGATTCATCTTGATCTGTGTCGTGGGTTTGGGTGTGTTCAACTCGTGCAAGAAAAGGATAGTCAGAGAAAGGACTGATACAAACCTTATGAGTCTTTATGACTTGGTTGACCAGTTACAGAAGGTGATTGGCGGCCCCAGGCAGATTTCGTACAGCGAATTGGCTTCTGCGACAGGACATTTTAGTGAGAGAGAAAAGCTTGGAGAGGGAAACTTTGGGGTGGTTTACAAGGGCTACCTAAAAGACTTGGACTCCTACGCTGCTGTTAAGAAGATATCATTAGGACCTGAAATGGGGATCAAGGAAGTTGTATCAGAAGTGAGGATCATCAGTCAACTTAGGCATCGGAATCTGATGCAACTCATCGGTTGGTGCCACGAAAAAAGACAACTCCTACTGGCTTTCGAGTTCATGCCCAACGGTAGGTTAGATGCTCATTTGTTTGAAGAAGAAAGCTCGTTAGTTTGGGAGGTACGATACAAAATTGCTCAAGGCTTAGCCGCCGGGTTGCTCTATCTACAACAAGAATTGGAACATTTTGTGCTGCATAGGGATGTCAAATCCAGGAACGTTATGTTGGATTCAAATTTCAACCCTAAACTAGGGGGGTTTGGGTTAGCAAAGCTTCTGGACCACGAAGAAGGAATAGACACTTTTATTGCCGGAACCTATGGCTACATGGCTCCTGAATTCATTGTAGACGGTAAATATTCCAAGAAAACAGATGTGTACAGCTTCGGAGTTGTTGCTTTGGAAATAGCCTGCGGGAGAAAACCCATTGATCGCCGGGCAGAAAGGAGTAAAATCGATATGGTGGAATGGGTTTGGGAGCTTTATGAAGAAGGGAAAGTCACAGAAGCAGCTGACCCAAAATTGTGTAGGAATTTTGATGAGAAGCAGATGGAGTGCTTGATGATTGTCGGATTGTGGTGTGCTCATCCGTGTGACAGTTCAAGACCTTCAATTCAAGAAGCAATTCGGGCGCTTAACTTCGAACTTCCATTGCCAATTCTCCCATCAAACAAGCCAATTTTTCCATCATCTCCTTCAATGTCAACTCCTCCTTCAATGTCACTCTCGAGGTTGACTAGCACTAATGCTTCTGAATCTCACCTGTACACAATCTTTCTCGCAGTCTGCTTTGTATTGAGGCTGCGCACGGCCATGATGAATAGAAAAATGAGAGGAGATGAAGCGAGAGAGAACGGAGGATGGATTAGGGAGCCGGGCTTCTGA

Protein Analysis

497

Amino Acids

55.53

Weight (kDa)

7.95

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 2 - 42 1.8e-06 Legume lectin domain
Pkinase PF00069 147 - 411 1.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 149 - 358 1.1e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 627
AccI GTMKAC 1 cut(s) 954
AciI CCGC 4 cut(s) 224, 387, 756, 1020
AclI AACGTT 1 cut(s) 825
AclWI GGATC 2 cut(s) 560, 587
AcoI YGGCCR 1 cut(s) 1416
AcsI RAATTY 4 cut(s) 94, 841, 944, 1138
AdeI CACNNNGTG 1 cut(s) 90
AfaI GTAC 5 cut(s) 241, 407, 729, 986, 1373
AfiI CCNNNNNNNGG 4 cut(s) 176, 548, 678, 857
AjnI CCWGG 3 cut(s) 175, 392, 818
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
AluBI AGCT 6 cut(s) 454, 711, 880, 990, 1087, 1118
AluI AGCT 6 cut(s) 454, 711, 880, 990, 1087, 1118
Alw21I GWGCWC 1 cut(s) 1192
Alw26I GTCTC 1 cut(s) 165
AlwI GGATC 2 cut(s) 560, 587
Ama87I CYCGRG 1 cut(s) 1333
AoxI GGCC 3 cut(s) 178, 388, 1416
ApeKI GCWGC 4 cut(s) 515, 799, 1115, 1408
ApoI RAATTY 4 cut(s) 94, 841, 944, 1138
Asp700I GAANNNNTTC 1 cut(s) 1230
AspLEI GCGC 2 cut(s) 1240, 1413
AspS9I GGNCC 3 cut(s) 389, 539, 886
AsuC2I CCSGG 3 cut(s) 760, 1043, 1482
AsuHPI GGTGA 4 cut(s) 76, 238, 391, 1358
AsuII TTCGAA 1 cut(s) 1248
AvaI CYCGRG 1 cut(s) 1333
AvaII GGWCC 2 cut(s) 539, 886
BanI GGYRCC 1 cut(s) 627
BauI CACGAG 1 cut(s) 298
Bbv12I GWGCWC 1 cut(s) 1192
BbvI GCAGC 4 cut(s) 502, 786, 1127, 1395
BccI CCATC 4 cut(s) 1150, 1279, 1300, 1461
BceAI ACGGC 1 cut(s) 1431
BciT130I CCWGG 3 cut(s) 177, 394, 820
BcnI CCSGG 3 cut(s) 760, 1043, 1482
BcoDI GTCTC 1 cut(s) 165
BfaI CTAG 2 cut(s) 857, 1344
BfoI RGCGCY 1 cut(s) 1241
BisI GCNGC 6 cut(s) 388, 516, 756, 800, 1116, 1409
BlpI GCTNAGC 1 cut(s) 751
BlsI GCNGC 6 cut(s) 389, 517, 757, 801, 1117, 1410
BmcAI AGTACT 1 cut(s) 241
Bme1390I CCNGG 6 cut(s) 177, 394, 760, 820, 1043, 1482
Bme18I GGWCC 2 cut(s) 539, 886
BmeT110I CYCGRG 1 cut(s) 1333
BmgT120I GGNCC 3 cut(s) 389, 539, 886
BmiI GGNNCC 5 cut(s) 391, 629, 922, 939, 1479
BmrFI CCNGG 6 cut(s) 177, 394, 760, 820, 1043, 1482
BmsI GCATC 3 cut(s) 600, 607, 676
BpmI CTGGAG 1 cut(s) 147
Bpu1102I GCTNAGC 1 cut(s) 751
Bpu14I TTCGAA 1 cut(s) 1248
BpuEI CTTGAG 1 cut(s) 729
BpuMI CCSGG 3 cut(s) 760, 1043, 1482
Bsa29I ATCGAT 1 cut(s) 1062
BsaJI CCNNGG 1 cut(s) 392
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 548, 678, 857
Bse1I ACTGG 4 cut(s) 164, 250, 367, 657
Bse3DI GCAATG 1 cut(s) 1256
BseBI CCWGG 3 cut(s) 177, 394, 820
BseCI ATCGAT 1 cut(s) 1062
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 3 cut(s) 814, 1192, 1472
BseLI CCNNNNNNNGG 4 cut(s) 176, 548, 678, 857
BseMI GCAATG 1 cut(s) 1256
BseNI ACTGG 4 cut(s) 164, 250, 367, 657
BseRI GAGGAG 2 cut(s) 1305, 1455
BseXI GCAGC 4 cut(s) 502, 786, 1127, 1395
BsgI GTGCAG 1 cut(s) 62
BshFI GGCC 3 cut(s) 180, 390, 1418
BshNI GGYRCC 1 cut(s) 627
BshVI ATCGAT 1 cut(s) 1062
BsiHKAI GWGCWC 1 cut(s) 1192
BsiHKCI CYCGRG 1 cut(s) 1333
BsiSI CCGG 5 cut(s) 26, 759, 918, 1042, 1481
BslI CCNNNNNNNGG 4 cut(s) 176, 548, 678, 857
BsmAI GTCTC 1 cut(s) 165
BsnI GGCC 3 cut(s) 180, 390, 1418
BsoBI CYCGRG 1 cut(s) 1333
Bsp119I TTCGAA 1 cut(s) 1248
Bsp1286I GDGCHC 1 cut(s) 1192
Bsp1407I TGTACA 2 cut(s) 984, 1371
Bsp143I GATC 5 cut(s) 7, 267, 552, 579, 1036
Bsp1720I GCTNAGC 1 cut(s) 751
BspACI CCGC 4 cut(s) 224, 387, 756, 1020
BspANI GGCC 3 cut(s) 180, 390, 1418
BspDI ATCGAT 1 cut(s) 1062
BspLI GGNNCC 5 cut(s) 391, 629, 922, 939, 1479
BspPI GGATC 2 cut(s) 560, 587
BspT104I TTCGAA 1 cut(s) 1248
BspT107I GGYRCC 1 cut(s) 627
BsrDI GCAATG 1 cut(s) 1256
BsrGI TGTACA 2 cut(s) 984, 1371
BsrI ACTGG 4 cut(s) 164, 250, 367, 657
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 5 cut(s) 7, 267, 552, 579, 1036
BssSI CACGAG 1 cut(s) 298
Bst2BI CACGAG 1 cut(s) 298
Bst2UI CCWGG 3 cut(s) 177, 394, 820
Bst4CI ACNGT 3 cut(s) 677, 959, 1205
BstAUI TGTACA 2 cut(s) 984, 1371
BstBI TTCGAA 1 cut(s) 1248
BstC8I GCNNGC 2 cut(s) 23, 1018
BstDEI CTNAG 2 cut(s) 593, 751
BstENI CCTNNNNNAGG 1 cut(s) 855
BstF5I GGATG 3 cut(s) 814, 1192, 1472
BstH2I RGCGCY 1 cut(s) 1241
BstHHI GCGC 2 cut(s) 1240, 1413
BstKTI GATC 5 cut(s) 10, 270, 555, 582, 1039
BstMAI GTCTC 1 cut(s) 165
BstMBI GATC 5 cut(s) 7, 267, 552, 579, 1036
BstMWI GCNNNNNNNGC 2 cut(s) 71, 1235
BstNI CCWGG 3 cut(s) 177, 394, 820
BstSCI CCNGG 6 cut(s) 175, 392, 758, 818, 1041, 1480
BstV1I GCAGC 4 cut(s) 502, 786, 1127, 1395
Bsu15I ATCGAT 1 cut(s) 1062
BsuRI GGCC 3 cut(s) 180, 390, 1418
BsuTUI ATCGAT 1 cut(s) 1062
BtsCI GGATG 3 cut(s) 814, 1192, 1472
Cac8I GCNNGC 2 cut(s) 23, 1018
CfoI GCGC 2 cut(s) 1240, 1413
Cfr13I GGNCC 3 cut(s) 389, 539, 886
ClaI ATCGAT 1 cut(s) 1062
Csp6I GTAC 5 cut(s) 240, 406, 728, 985, 1372
CviAII CATG 4 cut(s) 88, 667, 934, 1420
CviQI GTAC 5 cut(s) 240, 406, 728, 985, 1372
DdeI CTNAG 2 cut(s) 593, 751
DpnI GATC 5 cut(s) 9, 269, 554, 581, 1038
DpnII GATC 5 cut(s) 7, 267, 552, 579, 1036
DraIII CACNNNGTG 1 cut(s) 90
EaeI YGGCCR 1 cut(s) 1416
Eco32I GATATC 1 cut(s) 531
Eco47I GGWCC 2 cut(s) 539, 886
Eco88I CYCGRG 1 cut(s) 1333
EcoNI CCTNNNNNAGG 1 cut(s) 855
EcoO109I RGGNCCY 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 944
EcoRII CCWGG 3 cut(s) 175, 392, 818
EcoRV GATATC 1 cut(s) 531
FaeI CATG 4 cut(s) 91, 670, 937, 1423
FatI CATG 4 cut(s) 87, 666, 933, 1419
FauI CCCGC 1 cut(s) 1013
FblI GTMKAC 1 cut(s) 954
Fnu4HI GCNGC 6 cut(s) 388, 516, 756, 800, 1116, 1409
FokI GGATG 3 cut(s) 821, 1179, 1479
Fsp4HI GCNGC 6 cut(s) 388, 516, 756, 800, 1116, 1409
FspBI CTAG 2 cut(s) 857, 1344
FspI TGCGCA 1 cut(s) 1412
GlaI GCGC 2 cut(s) 1239, 1412
GluI GCNGC 6 cut(s) 388, 516, 756, 800, 1116, 1409
GsuI CTGGAG 1 cut(s) 147
HaeII RGCGCY 1 cut(s) 1241
HaeIII GGCC 3 cut(s) 180, 390, 1418
HapII CCGG 5 cut(s) 26, 759, 918, 1042, 1481
HhaI GCGC 2 cut(s) 1240, 1413
Hin1II CATG 4 cut(s) 91, 670, 937, 1423
Hin6I GCGC 2 cut(s) 1238, 1411
HinP1I GCGC 2 cut(s) 1238, 1411
HincII GTYRAC 4 cut(s) 364, 590, 1311, 1341
HindII GTYRAC 4 cut(s) 364, 590, 1311, 1341
HindIII AAGCTT 2 cut(s) 452, 878
HinfI GANTC 8 cut(s) 122, 158, 258, 346, 506, 604, 836, 1361
HpaII CCGG 5 cut(s) 26, 759, 918, 1042, 1481
HphI GGTGA 4 cut(s) 76, 238, 391, 1358
Hpy166II GTNNAC 8 cut(s) 364, 481, 590, 955, 985, 1311, 1341, 1374
Hpy188I TCNGA 9 cut(s) 12, 320, 571, 603, 609, 995, 1178, 1360, 1490
Hpy188III TCNNGA 7 cut(s) 201, 265, 884, 941, 1209, 1223, 1333
Hpy8I GTNNAC 8 cut(s) 364, 481, 590, 955, 985, 1311, 1341, 1374
HpyAV CCTTC 6 cut(s) 370, 890, 1091, 1224, 1311, 1329
HpyCH4III ACNGT 3 cut(s) 677, 959, 1205
HpyCH4IV ACGT 1 cut(s) 825
HpyCH4V TGCA 4 cut(s) 79, 303, 613, 802
HpyF10VI GCNNNNNNNGC 2 cut(s) 71, 1235
HpyF3I CTNAG 2 cut(s) 593, 751
HpySE526I ACGT 1 cut(s) 825
Hsp92II CATG 4 cut(s) 91, 670, 937, 1423
HspAI GCGC 2 cut(s) 1238, 1411
Kzo9I GATC 5 cut(s) 7, 267, 552, 579, 1036
LmnI GCTCC 3 cut(s) 943, 1084, 1477
Lsp1109I GCAGC 4 cut(s) 502, 786, 1127, 1395
LweI GCATC 3 cut(s) 600, 607, 676
MaeI CTAG 2 cut(s) 857, 1344
MaeII ACGT 1 cut(s) 825
MaeIII GTNAC 4 cut(s) 369, 1105, 1199, 1326
MalI GATC 5 cut(s) 9, 269, 554, 581, 1038
MboI GATC 5 cut(s) 7, 267, 552, 579, 1036
MboII GAAGA 6 cut(s) 60, 538, 713, 716, 905, 1106
MhlI GDGCHC 1 cut(s) 1192
MlyI GAGTC 3 cut(s) 167, 355, 500
MmeI TCCRAC 3 cut(s) 194, 813, 1156
MnlI CCTC 8 cut(s) 454, 570, 718, 1326, 1329, 1398, 1433, 1457
MroXI GAANNNNTTC 1 cut(s) 1230
MseI TTAA 2 cut(s) 522, 1242
MslI CAYNNNNRTG 5 cut(s) 86, 438, 807, 1197, 1418
MspA1I CMGCKG 1 cut(s) 1118
MspI CCGG 5 cut(s) 26, 759, 918, 1042, 1481
MspR9I CCNGG 6 cut(s) 177, 394, 760, 820, 1043, 1482
MvaI CCWGG 3 cut(s) 177, 394, 820
MwoI GCNNNNNNNGC 2 cut(s) 71, 1235
NciI CCSGG 3 cut(s) 760, 1043, 1482
NdeII GATC 5 cut(s) 7, 267, 552, 579, 1036
NlaIII CATG 4 cut(s) 91, 670, 937, 1423
NlaIV GGNNCC 5 cut(s) 391, 629, 922, 939, 1479
NmuCI GTSAC 3 cut(s) 1105, 1199, 1326
NsbI TGCGCA 1 cut(s) 1412
NspV TTCGAA 1 cut(s) 1248
PaeR7I CTCGAG 1 cut(s) 1333
PdmI GAANNNNTTC 1 cut(s) 1230
PfeI GAWTC 5 cut(s) 122, 258, 604, 836, 1361
PfoI TCCNGGA 1 cut(s) 818
PkrI GCNGC 6 cut(s) 389, 517, 757, 801, 1117, 1410
PleI GAGTC 3 cut(s) 166, 354, 500
PpsI GAGTC 3 cut(s) 166, 354, 500
PpuMI RGGWCCY 1 cut(s) 539
Psp1406I AACGTT 1 cut(s) 825
Psp5II RGGWCCY 1 cut(s) 539
Psp6I CCWGG 3 cut(s) 175, 392, 818
PspGI CCWGG 3 cut(s) 175, 392, 818
PspN4I GGNNCC 5 cut(s) 391, 629, 922, 939, 1479
PspPI GGNCC 3 cut(s) 389, 539, 886
PspPPI RGGWCCY 1 cut(s) 539
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 5 cut(s) 241, 407, 729, 986, 1373
RsaNI GTAC 5 cut(s) 240, 406, 728, 985, 1372
RseI CAYNNNNRTG 5 cut(s) 86, 438, 807, 1197, 1418
SaqAI TTAA 2 cut(s) 522, 1242
SatI GCNGC 6 cut(s) 388, 516, 756, 800, 1116, 1409
Sau3AI GATC 5 cut(s) 7, 267, 552, 579, 1036
Sau96I GGNCC 3 cut(s) 389, 539, 886
ScaI AGTACT 1 cut(s) 241
SchI GAGTC 3 cut(s) 167, 355, 500
ScrFI CCNGG 6 cut(s) 177, 394, 760, 820, 1043, 1482
SduI GDGCHC 1 cut(s) 1192
SfaNI GCATC 3 cut(s) 600, 607, 676
Sfr274I CTCGAG 1 cut(s) 1333
SfuI TTCGAA 1 cut(s) 1248
SinI GGWCC 2 cut(s) 539, 886
SlaI CTCGAG 1 cut(s) 1333
SmiMI CAYNNNNRTG 5 cut(s) 86, 438, 807, 1197, 1418
SmlI CTYRAG 2 cut(s) 744, 1333
SmoI CTYRAG 2 cut(s) 744, 1333
SsiI CCGC 4 cut(s) 224, 387, 756, 1020
SspI AATATT 1 cut(s) 965
SspMI CTAG 2 cut(s) 857, 1344
StyD4I CCNGG 6 cut(s) 175, 392, 758, 818, 1041, 1480
TaaI ACNGT 3 cut(s) 677, 959, 1205
TaiI ACGT 1 cut(s) 828
TaqI TCGA 4 cut(s) 660, 1062, 1248, 1334
TatI WGTACW 3 cut(s) 239, 984, 1371
TauI GCSGC 2 cut(s) 390, 758
TfiI GAWTC 5 cut(s) 122, 258, 604, 836, 1361
Tru1I TTAA 2 cut(s) 522, 1242
Tru9I TTAA 2 cut(s) 522, 1242
TseFI GTSAC 3 cut(s) 1105, 1199, 1326
TseI GCWGC 4 cut(s) 515, 799, 1115, 1408
Tsp45I GTSAC 3 cut(s) 1105, 1199, 1326
TspDTI ATGAA 7 cut(s) 135, 250, 655, 937, 1107, 1439, 1461
TspGWI ACGGA 2 cut(s) 1185, 1476
VpaK11BI GGWCC 2 cut(s) 539, 886
XagI CCTNNNNNAGG 1 cut(s) 855
XapI RAATTY 4 cut(s) 94, 841, 944, 1138
XhoI CTCGAG 1 cut(s) 1333
XmiI GTMKAC 1 cut(s) 954
XmnI GAANNNNTTC 1 cut(s) 1230
XspI CTAG 2 cut(s) 857, 1344
ZrmI AGTACT 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.