Rw5G020660

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
27341712 .. 27348805
7094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G020660.1

Sequence Viewer

Length: 2049 bp
ATGGCTGTCCATAAACAAGTACAATTTCTTCTTCTCTTCACTCTGTTTACCCCTTTCGCAACACCACTAACCTTCAATTTCTCCACCTTCCCCAATGACACCACCTCTTTGTTCATAGAAGGAGATGCTTATACCGACGGCAAACTCCTCCGGCTCACCAAAAGCGCCAGAGAACTTAAAGTGGCTGGCAACGTTGGTCGAGCCACGTACAGCCAACCATTCCTCCTGCGGGGGGAAGTCTCCGGAAAACTTAAACTTGCAGACTTCACCACGCACTTTACGTTTGTCATTGATTCTCAAGGCAACAAAACCTATGGCGATGGGTTGGCGTTCTTCCTGGCTCCAAAAGGATCCTTACTCAACAGTGCATTAGGAGATGGCGGCAAGCTTGGCCTCCCCGTCGCAGACCTTCCGGGAGGGAATGAGTACCCGTTTGTGGCAGTGGAGTTTGATATCTATCAGAATCCACTGCCAAGCTACATCGACCCTCAATACGATCACGTGGGGGTCGATGTCAACAATCTCAGGTCTAATATTACCATGGCTTGGTCTGGAGATATTCCGAATGCAAAAATCAACAGTGCTTCGATTAGTTATAACTCTAGCTTAAAAACTCTTAAGTCTGGTATCCAAAAGCAAGTGATCAGATATCTTAATTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTATTTGTTGGGTTCTCTGCTGCAACCGGTGATAGGATTGCTTTGTCCGAGATCATCTCATGGAATTTCACTTCGACTTCTATCGTTGATGAGATTGTTCATGCGACAGACACTGCACCAGCAACACGGAACCCTGATACAGTTGAACAAAAGTCAAGAAATAACAATATACCACGAATTGCTGTGGGGCTAGGTGTTGGTGGAAGTATCTTGGTGGCGGGGTTGGCTTTGGTTTGGTTCATCTTTCGGAGGAAGAGGCAAGCACTTAAAAATGATGAACGTTCTATGGTGGTACTCAATGACGAGTTCGAAAGGGGAACAGGCCCCAGGAAGTTTTTGTACAGCGAGTTGGCTAGAGCCACGAGTAATTTTGATGAAGGAGACAAGCTTGGAGAGGGGGGATTTGGTGGAGTCTATAGAGGATTCATAAAAGACTTGAACACATATGTTGCTGTTAAGAGGGTCTCCAAGGGATCCAAACAACGGCTAAAGGAGTACGCAGCCGAAGTCAGGATCATCGGTCAACTTAGACATCGAAACCTTGTGCAACTCATTGGTTGGTGTCACGAAAACGGAGATCTCCTACTTGTGTATGAGTTCATGCCCCACGGCAGTTTAGATTCTTATTTGTTCAAAGCAGAAGGCTTCTTGAATTGGGAGGTAAGATACAAAATTGCTCTTGGCTTGGCCAGCGGTGTTCTTTATATACACGAAGGATGCGAACAATGTATACTGCACAGAGATATCAAATCAAGCAATGTTATGTTGGATTTGAATTTCAACGTAAAACTTGGAGATTTCGGCCTAGCTAGACTTGTGGAGCACGAAAAAGGATCGCTAACAACGATTGTGGCTGGAACTAGGGGCTACATGGCTCTTGATTATGTTGTCACAGGCAAGGCTAGCAAGGAGTCAGATGGCTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAGATCCATGGATTTCGATTTGGAAAGTAAGAGGATCAACTTAGTGGAGTGGGTGTGGCAGCTTTATGGAGAAGAGATACTTATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAGAAACAAATCGAGTGTTTGATGATTGTTGGGCTCTGGTGTGCTCAACCAGACTATAATTTCAGACCTCCAATACTACAAGCGATTCAAGAACAATTGCCCATTCTCCCAGCAATCATGCCAATGGCCCCTTCTTTTGCTCGTCCAGTTCGGGCATTGAGTGATACTATTAGTGGTTCTGAAATAGGTCTTACTAATTCTTCAAATAGTGACAGCACCAATTCCTCAAAGTTGGCTTCATCTTCTGCAAATTATCAGTCATCACCTCTTTGA

Protein Analysis

682

Amino Acids

75.36

Weight (kDa)

6.02

Isoelectric Point (pI)

34.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 262 2.2e-54 Legume lectin domain
Pkinase PF00069 356 - 556 8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 358 - 552 6.1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AccB7I CCANNNNNTGG 1 cut(s) 546
AccI GTMKAC 1 cut(s) 1423
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 4 cut(s) 229, 381, 911, 1386
AclI AACGTT 2 cut(s) 192, 973
AclWI GGATC 8 cut(s) 345, 358, 1161, 1174, 1214, 1534, 1653, 1697
AcoI YGGCCR 1 cut(s) 1380
AcsI RAATTY 2 cut(s) 757, 1468
AcvI CACGTG 1 cut(s) 502
AfaI GTAC 7 cut(s) 21, 209, 428, 680, 987, 1034, 1190
AfiI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 726, 1176, 1203
AflII CTTAAG 1 cut(s) 617
AgeI ACCGGT 1 cut(s) 719
AjnI CCWGG 2 cut(s) 336, 1019
AjuI GAANNNNNNNTTGG 2 cut(s) 1891, 1923
AluBI AGCT 9 cut(s) 388, 477, 606, 1081, 1502, 1620, 1646, 1717, 1748
AluI AGCT 9 cut(s) 388, 477, 606, 1081, 1502, 1620, 1646, 1717, 1748
Alw21I GWGCWC 2 cut(s) 1518, 1822
Alw26I GTCTC 3 cut(s) 244, 1068, 1162
AlwI GGATC 8 cut(s) 345, 358, 1161, 1174, 1214, 1534, 1653, 1697
AlwNI CAGNNNCTG 1 cut(s) 806
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 5 cut(s) 391, 1015, 1380, 1495, 1902
ApeKI GCWGC 4 cut(s) 713, 1193, 1714, 1745
ApoI RAATTY 2 cut(s) 757, 1468
ArsI GACNNNNNNTTYG 1 cut(s) 2018
AsiGI ACCGGT 1 cut(s) 719
AspLEI GCGC 1 cut(s) 167
AspS9I GGNCC 2 cut(s) 1016, 1903
AsuC2I CCSGG 1 cut(s) 414
AsuHPI GGTGA 4 cut(s) 148, 259, 734, 2031
AsuII TTCGAA 1 cut(s) 1002
AsuNHI GCTAGC 1 cut(s) 1595
BalI TGGCCA 1 cut(s) 1382
BamHI GGATCC 2 cut(s) 350, 1166
BanII GRGCYC 1 cut(s) 1812
BarI GAAGNNNNNNTAC 4 cut(s) 12, 44, 1016, 1048
BauI CACGAG 1 cut(s) 1054
BbrPI CACGTG 1 cut(s) 502
Bbv12I GWGCWC 2 cut(s) 1518, 1822
BbvI GCAGC 4 cut(s) 700, 1205, 1726, 1757
BccI CCATC 3 cut(s) 314, 371, 1604
BceAI ACGGC 3 cut(s) 154, 1193, 1318
BciT130I CCWGG 2 cut(s) 338, 1021
BciVI GTATCC 1 cut(s) 638
BclI TGATCA 1 cut(s) 642
BcnI CCSGG 1 cut(s) 414
BcoDI GTCTC 3 cut(s) 244, 1068, 1162
BfaI CTAG 7 cut(s) 603, 884, 1047, 1499, 1503, 1554, 1596
BfmI CTRYAG 2 cut(s) 1108, 1615
BfoI RGCGCY 1 cut(s) 168
BfrI CTTAAG 1 cut(s) 617
BfuI GTATCC 1 cut(s) 638
BglII AGATCT 1 cut(s) 1270
BisI GCNGC 5 cut(s) 382, 714, 1194, 1715, 1746
BlsI GCNGC 5 cut(s) 383, 715, 1195, 1716, 1747
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 3 cut(s) 338, 414, 1021
BmgT120I GGNCC 2 cut(s) 1016, 1903
BmiI GGNNCC 6 cut(s) 342, 352, 824, 1018, 1168, 1905
BmrFI CCNGG 3 cut(s) 338, 414, 1021
BmsI GCATC 2 cut(s) 115, 1400
BmtI GCTAGC 1 cut(s) 1599
BplI GAGNNNNNCTC 2 cut(s) 734, 766
BpmI CTGGAG 1 cut(s) 573
Bpu14I TTCGAA 1 cut(s) 1002
BpuEI CTTGAG 1 cut(s) 282
BpuMI CCSGG 1 cut(s) 414
BsaAI YACGTR 3 cut(s) 207, 502, 661
BsaBI GATNNNNATC 1 cut(s) 456
BsaI GGTCTC 1 cut(s) 1162
BsaJI CCNNGG 5 cut(s) 540, 1019, 1161, 1300, 1662
BsaWI WCCGGW 2 cut(s) 242, 719
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 1694, 1724
Bsc4I CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 726, 1176, 1203
Bse118I RCCGGY 1 cut(s) 719
Bse1I ACTGG 1 cut(s) 1922
Bse3DI GCAATG 1 cut(s) 1456
Bse8I GATNNNNATC 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 2 cut(s) 338, 1021
BseDI CCNNGG 5 cut(s) 540, 1019, 1161, 1300, 1662
BseGI GGATG 1 cut(s) 1415
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 726, 1176, 1203
BseMI GCAATG 1 cut(s) 1456
BseMII CTCAG 1 cut(s) 538
BseNI ACTGG 1 cut(s) 1922
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 4 cut(s) 700, 1205, 1726, 1757
BseYI CCCAGC 1 cut(s) 1885
BsgI GTGCAG 2 cut(s) 792, 1412
BshFI GGCC 5 cut(s) 393, 1017, 1382, 1497, 1904
BshTI ACCGGT 1 cut(s) 719
BsiHKAI GWGCWC 2 cut(s) 1518, 1822
BsiSI CCGG 4 cut(s) 151, 243, 413, 720
BslI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 726, 1176, 1203
BsmAI GTCTC 3 cut(s) 244, 1068, 1162
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 5 cut(s) 393, 1017, 1382, 1497, 1904
Bso31I GGTCTC 1 cut(s) 1162
Bsp119I TTCGAA 1 cut(s) 1002
Bsp1286I GDGCHC 3 cut(s) 1518, 1812, 1822
Bsp13I TCCGGA 1 cut(s) 242
Bsp1407I TGTACA 1 cut(s) 1032
Bsp19I CCATGG 2 cut(s) 540, 1662
BspACI CCGC 4 cut(s) 229, 381, 911, 1386
BspANI GGCC 5 cut(s) 393, 1017, 1382, 1497, 1904
BspCNI CTCAG 1 cut(s) 537
BspEI TCCGGA 1 cut(s) 242
BspLI GGNNCC 6 cut(s) 342, 352, 824, 1018, 1168, 1905
BspOI GCTAGC 1 cut(s) 1599
BspPI GGATC 8 cut(s) 345, 358, 1161, 1174, 1214, 1534, 1653, 1697
BspT104I TTCGAA 1 cut(s) 1002
BspTI CTTAAG 1 cut(s) 617
BspTNI GGTCTC 1 cut(s) 1162
BsrDI GCAATG 1 cut(s) 1456
BsrFI RCCGGY 1 cut(s) 719
BsrGI TGTACA 1 cut(s) 1032
BsrI ACTGG 1 cut(s) 1922
BssAI RCCGGY 1 cut(s) 719
BssECI CCNNGG 5 cut(s) 540, 1019, 1161, 1300, 1662
BssNAI GTATAC 1 cut(s) 1424
BssSI CACGAG 1 cut(s) 1054
BssT1I CCWWGG 3 cut(s) 540, 1161, 1662
Bst1107I GTATAC 1 cut(s) 1424
Bst2BI CACGAG 1 cut(s) 1054
Bst2UI CCWGG 2 cut(s) 338, 1021
Bst4CI ACNGT 4 cut(s) 365, 581, 678, 835
Bst6I CTCTTC 3 cut(s) 41, 941, 1722
BstAFI CTTAAG 1 cut(s) 617
BstAUI TGTACA 1 cut(s) 1032
BstBAI YACGTR 3 cut(s) 207, 502, 661
BstBI TTCGAA 1 cut(s) 1002
BstC8I GCNNGC 5 cut(s) 187, 386, 954, 1384, 1597
BstDEI CTNAG 3 cut(s) 524, 1220, 1696
BstDSI CCRYGG 3 cut(s) 540, 1300, 1662
BstF5I GGATG 1 cut(s) 1415
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 1 cut(s) 167
BstMAI GTCTC 3 cut(s) 244, 1068, 1162
BstMWI GCNNNNNNNGC 4 cut(s) 390, 917, 1383, 1596
BstNI CCWGG 2 cut(s) 338, 1021
BstSCI CCNGG 3 cut(s) 336, 412, 1019
BstSFI CTRYAG 2 cut(s) 1108, 1615
BstV1I GCAGC 4 cut(s) 700, 1205, 1726, 1757
BstX2I RGATCY 4 cut(s) 350, 1166, 1270, 1658
BstYI RGATCY 4 cut(s) 350, 1166, 1270, 1658
BstZ17I GTATAC 1 cut(s) 1424
BsuI GTATCC 1 cut(s) 638
BsuRI GGCC 5 cut(s) 393, 1017, 1382, 1497, 1904
BtgI CCRYGG 3 cut(s) 540, 1300, 1662
BtgZI GCGATG 1 cut(s) 333
BtsCI GGATG 1 cut(s) 1415
BtsI GCAGTG 3 cut(s) 447, 467, 804
BtsIMutI CAGTG 5 cut(s) 370, 447, 467, 586, 804
Cac8I GCNNGC 5 cut(s) 187, 386, 954, 1384, 1597
CaiI CAGNNNCTG 1 cut(s) 806
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 719
Cfr13I GGNCC 2 cut(s) 1016, 1903
Csp6I GTAC 7 cut(s) 20, 208, 427, 679, 986, 1033, 1189
CspAI ACCGGT 1 cut(s) 719
CspCI CAANNNNNGTGG 2 cut(s) 1524, 1559
CviAII CATG 7 cut(s) 541, 753, 794, 1294, 1564, 1663, 1894
CviQI GTAC 7 cut(s) 20, 208, 427, 679, 986, 1033, 1189
DdeI CTNAG 3 cut(s) 524, 1220, 1696
EaeI YGGCCR 1 cut(s) 1380
Eam1104I CTCTTC 3 cut(s) 41, 941, 1722
EarI CTCTTC 3 cut(s) 41, 941, 1722
Eco130I CCWWGG 3 cut(s) 540, 1161, 1662
Eco24I GRGCYC 1 cut(s) 1812
Eco31I GGTCTC 1 cut(s) 1162
Eco32I GATATC 3 cut(s) 454, 650, 1438
Eco72I CACGTG 1 cut(s) 502
EcoO109I RGGNCCY 1 cut(s) 1016
EcoRII CCWGG 2 cut(s) 336, 1019
EcoRV GATATC 3 cut(s) 454, 650, 1438
EcoT14I CCWWGG 3 cut(s) 540, 1161, 1662
EcoT38I GRGCYC 1 cut(s) 1812
ErhI CCWWGG 3 cut(s) 540, 1161, 1662
FaeI CATG 7 cut(s) 544, 756, 797, 1297, 1567, 1666, 1897
FalI AAGNNNNNCTT 2 cut(s) 1719, 1751
FatI CATG 7 cut(s) 540, 752, 793, 1293, 1563, 1662, 1893
FauI CCCGC 2 cut(s) 222, 904
FauNDI CATATG 1 cut(s) 1138
FbaI TGATCA 1 cut(s) 642
FblI GTMKAC 1 cut(s) 1423
Fnu4HI GCNGC 5 cut(s) 382, 714, 1194, 1715, 1746
FokI GGATG 1 cut(s) 1422
FriOI GRGCYC 1 cut(s) 1812
Fsp4HI GCNGC 5 cut(s) 382, 714, 1194, 1715, 1746
FspBI CTAG 7 cut(s) 603, 884, 1047, 1499, 1503, 1554, 1596
GlaI GCGC 1 cut(s) 166
GluI GCNGC 5 cut(s) 382, 714, 1194, 1715, 1746
GsaI CCCAGC 1 cut(s) 1889
GsuI CTGGAG 1 cut(s) 573
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 5 cut(s) 393, 1017, 1382, 1497, 1904
HapII CCGG 4 cut(s) 151, 243, 413, 720
HhaI GCGC 1 cut(s) 167
Hin1II CATG 7 cut(s) 544, 756, 797, 1297, 1567, 1666, 1897
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HincII GTYRAC 2 cut(s) 517, 1217
HindII GTYRAC 2 cut(s) 517, 1217
HindIII AAGCTT 2 cut(s) 386, 1079
HinfI GANTC 7 cut(s) 293, 463, 1104, 1116, 1313, 1604, 1861
HpaII CCGG 4 cut(s) 151, 243, 413, 720
HphI GGTGA 4 cut(s) 148, 259, 734, 2031
Hpy166II GTNNAC 4 cut(s) 48, 517, 1217, 1424
Hpy188III TCNNGA 8 cut(s) 243, 552, 849, 1204, 1259, 1342, 1571, 1865
Hpy8I GTNNAC 4 cut(s) 48, 517, 1217, 1424
Hpy99I CGWCG 2 cut(s) 140, 404
HpyAV CCTTC 8 cut(s) 82, 97, 113, 419, 1064, 1328, 1400, 1917
HpyCH4III ACNGT 4 cut(s) 365, 581, 678, 835
HpyCH4IV ACGT 7 cut(s) 192, 206, 281, 501, 660, 973, 1476
HpyCH4V TGCA 8 cut(s) 260, 368, 569, 716, 809, 1240, 1429, 2024
HpyF10VI GCNNNNNNNGC 4 cut(s) 390, 917, 1383, 1596
HpyF3I CTNAG 3 cut(s) 524, 1220, 1696
HpySE526I ACGT 7 cut(s) 192, 206, 281, 501, 660, 973, 1476
Hsp92II CATG 7 cut(s) 544, 756, 797, 1297, 1567, 1666, 1897
HspAI GCGC 1 cut(s) 165
Kpn2I TCCGGA 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 642
LmnI GCTCC 2 cut(s) 346, 1513
Lsp1109I GCAGC 4 cut(s) 700, 1205, 1726, 1757
LweI GCATC 2 cut(s) 115, 1400
MaeI CTAG 7 cut(s) 603, 884, 1047, 1499, 1503, 1554, 1596
MaeII ACGT 7 cut(s) 192, 206, 281, 501, 660, 973, 1476
MaeIII GTNAC 3 cut(s) 1256, 1582, 1985
MboII GAAGA 9 cut(s) 20, 23, 28, 325, 958, 1668, 1739, 1968, 2010
MfeI CAATTG 1 cut(s) 1871
MflI RGATCY 4 cut(s) 350, 1166, 1270, 1658
MhlI GDGCHC 3 cut(s) 1518, 1812, 1822
MlsI TGGCCA 1 cut(s) 1382
MluNI TGGCCA 1 cut(s) 1382
MlyI GAGTC 2 cut(s) 1113, 1613
MmeI TCCRAC 1 cut(s) 1440
Mox20I TGGCCA 1 cut(s) 1382
MroI TCCGGA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 1382
MseI TTAA 7 cut(s) 177, 252, 608, 618, 654, 960, 1149
MslI CAYNNNNRTG 1 cut(s) 1898
Msp20I TGGCCA 1 cut(s) 1382
MspA1I CMGCKG 2 cut(s) 1386, 1748
MspCI CTTAAG 1 cut(s) 617
MspI CCGG 4 cut(s) 151, 243, 413, 720
MspR9I CCNGG 3 cut(s) 338, 414, 1021
MunI CAATTG 1 cut(s) 1871
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 2 cut(s) 338, 1021
MwoI GCNNNNNNNGC 4 cut(s) 390, 917, 1383, 1596
NciI CCSGG 1 cut(s) 414
NcoI CCATGG 2 cut(s) 540, 1662
NdeI CATATG 1 cut(s) 1138
NheI GCTAGC 1 cut(s) 1595
NlaIII CATG 7 cut(s) 544, 756, 797, 1297, 1567, 1666, 1897
NlaIV GGNNCC 6 cut(s) 342, 352, 824, 1018, 1168, 1905
NmuCI GTSAC 3 cut(s) 1256, 1582, 1985
NspV TTCGAA 1 cut(s) 1002
PcsI WCGNNNNNNNCGW 4 cut(s) 278, 507, 1410, 1535
PctI GAATGC 1 cut(s) 571
PfeI GAWTC 5 cut(s) 293, 463, 1116, 1313, 1861
PflMI CCANNNNNTGG 1 cut(s) 546
PfoI TCCNGGA 1 cut(s) 412
PinAI ACCGGT 1 cut(s) 719
PkrI GCNGC 5 cut(s) 383, 715, 1195, 1716, 1747
PleI GAGTC 2 cut(s) 1112, 1612
PmaCI CACGTG 1 cut(s) 502
PmlI CACGTG 1 cut(s) 502
PpsI GAGTC 2 cut(s) 1112, 1612
Ppu21I YACGTR 3 cut(s) 207, 502, 661
PsiI TTATAA 1 cut(s) 597
Psp1406I AACGTT 2 cut(s) 192, 973
Psp6I CCWGG 2 cut(s) 336, 1019
PspCI CACGTG 1 cut(s) 502
PspFI CCCAGC 1 cut(s) 1885
PspGI CCWGG 2 cut(s) 336, 1019
PspN4I GGNNCC 6 cut(s) 342, 352, 824, 1018, 1168, 1905
PspPI GGNCC 2 cut(s) 1016, 1903
PsrI GAACNNNNNNTAC 2 cut(s) 1407, 1439
PstNI CAGNNNCTG 1 cut(s) 806
PsuI RGATCY 4 cut(s) 350, 1166, 1270, 1658
PvuII CAGCTG 1 cut(s) 1748
RsaI GTAC 7 cut(s) 21, 209, 428, 680, 987, 1034, 1190
RsaNI GTAC 7 cut(s) 20, 208, 427, 679, 986, 1033, 1189
RseI CAYNNNNRTG 1 cut(s) 1898
SaqAI TTAA 7 cut(s) 177, 252, 608, 618, 654, 960, 1149
SatI GCNGC 5 cut(s) 382, 714, 1194, 1715, 1746
Sau96I GGNCC 2 cut(s) 1016, 1903
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 2 cut(s) 1113, 1613
ScrFI CCNGG 3 cut(s) 338, 414, 1021
SduI GDGCHC 3 cut(s) 1518, 1812, 1822
SfaNI GCATC 2 cut(s) 115, 1400
SfcI CTRYAG 2 cut(s) 1108, 1615
SfuI TTCGAA 1 cut(s) 1002
SmiMI CAYNNNNRTG 1 cut(s) 1898
SmlI CTYRAG 2 cut(s) 297, 617
SmoI CTYRAG 2 cut(s) 297, 617
SsiI CCGC 4 cut(s) 229, 381, 911, 1386
SspI AATATT 1 cut(s) 535
SspMI CTAG 7 cut(s) 603, 884, 1047, 1499, 1503, 1554, 1596
StyD4I CCNGG 3 cut(s) 336, 412, 1019
StyI CCWWGG 3 cut(s) 540, 1161, 1662
TaaI ACNGT 4 cut(s) 365, 581, 678, 835
TaiI ACGT 7 cut(s) 195, 209, 284, 504, 663, 976, 1479
TaqI TCGA 9 cut(s) 199, 483, 510, 587, 767, 1002, 1228, 1671, 1788
TaqII GACCGA 1 cut(s) 1202
TatI WGTACW 3 cut(s) 19, 678, 1032
TauI GCSGC 1 cut(s) 384
TfiI GAWTC 5 cut(s) 293, 463, 1116, 1313, 1861
Tru1I TTAA 7 cut(s) 177, 252, 608, 618, 654, 960, 1149
Tru9I TTAA 7 cut(s) 177, 252, 608, 618, 654, 960, 1149
TscAI CASTG 5 cut(s) 370, 447, 474, 586, 811
TseFI GTSAC 3 cut(s) 1256, 1582, 1985
TseI GCWGC 4 cut(s) 713, 1193, 1714, 1745
Tsp45I GTSAC 3 cut(s) 1256, 1582, 1985
TspDTI ATGAA 8 cut(s) 103, 782, 922, 984, 1083, 1108, 1282, 2004
TspGWI ACGGA 2 cut(s) 835, 1281
TspRI CASTG 5 cut(s) 370, 447, 474, 586, 811
Van91I CCANNNNNTGG 1 cut(s) 546
Vha464I CTTAAG 1 cut(s) 617
XapI RAATTY 2 cut(s) 757, 1468
XmiI GTMKAC 1 cut(s) 1423
XspI CTAG 7 cut(s) 603, 884, 1047, 1499, 1503, 1554, 1596
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.