RLG00000014148

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
48117925 .. 48119891
1967 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014148

Sequence Viewer

Length: 1905 bp
ATGTCTGAAAGCAGAAGTAGCAGTATGCAAGCAATCTGCTTGTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCGTCTCTCACTTTGCTCATCCACTCTGCTTCAGTATAAATCAGTTCGACCCTAGTACAGATGGAGTAATTAACTATGAAGGTGATGCTCGGTATTCATCGGGAGTGCTTGAGATCAACAGAGGCTCTTATTTCCATGTCGGACATGCTACGTATGCAGAGCCTTTGCACCTATGGGACACTGCTACTGGGATATTGGCAGACTTCACTACTCATTTCACTTTCGTGGTCGACTTTGGTTATTATCCTAAGGAGTACTTAACCGATGGATTTGCCTTTTTCCTTGCTCCAGTTGGCTACCATATACCATCCAACTCTGTCGGTGGTGAACTGGGATTATTCAACTCCACCACCGAAAATGTCTTGTCCAAAAGCCAAATTGTAGCCGTAGAGTTCGACACTTGGGAAAACGAATGGGATCCACCGGGCCGCATATTGGGATCAACATCAATGAAATGTCTTCAGTTATTTACGCAAATTGGAATGCTAGTAACAGCATTGGGAAGCTTGGAGCACACAAACACCGTTTTTCCAGGAAATACTTCTTCTTCTCTTACTTACCATGTTGACTTGCGAGAGGTTCTTCCCGAAAGGGTTACGATCGGTTTTTCTGCTGCAACTGGATTATACCCTGCTCGGCATCTCATAAGATCATGGAGGTTTAATTCGACTTTGGTGGATATAAGAAGCAAGGGAAAGAAGAAAAAAATATTGTTGATTATAAGGAACATTGCAGTTCCTGGCTTCATTTTTACGCTTGGTGTAGTCATATGTTGGTTGGTGGTATTGAGGAAGTCGAGAAACAATTACTCCCGCGAAGTCTCTGATCTTGAGTGGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTATTTTTAGCCACCAACGGGTTTGCAAACGATAGAAGGCTAGGCCAAGGAGGGTCGGGACAAGTATATAAAGGACTCCTACATGACCTTGGAGGCTGCACAGTTGCTGTGAAGAGAATCAATGCACAATCTGATCAGCAATATGAGAAAGTCTTCATCAATGAAGTCAAAATTATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGCGAATGCTTACTTGTTTATGCATATATGCCTAACACCAGCCTTGACACCCATTTGTTTGGCACCAAAACAACTCTGCAATGGGATAACAGGTACAAGATAGCTTTGGGCTTGGCCTTAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTACTTCATAGGGATATCAAATCAGCTAACGTACTATTGGATGATGACTTCAACACTAAGCTTGGTGATTTTGGTATCGCCAAGCTTGTGGATCCCCGCTTGAGGTCTCAGACAAGAGAGGTGGTAGGGACTTTTGGATACATGGCCCCGGAATATGCTATTGAAGGGAGGGCTAGTAAGGAATCTGACATGTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGTGGAAGGAAGACTTACAAAGACGGTGAAGATCATGTGCCACTTTATAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTAGACGCAGCTGATGAAAGATTAGAATTGAATTATGATCAAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAACAACAAGGAAAGACCCAAAGCAGGACAGGTGATGAAGGTTATTCAACATGAAGCACCATTGCCGGAACTTCCACATGACATGCATAATGATCCAGAACTACCTCAACCTCAATACCAATCTCAAATTTCATCTTCTCAGATATCCTCAACTTCTTCTAGCTATAGTACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

635

Amino Acids

71.49

Weight (kDa)

6.06

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 36 - 170 3.3e-33 Legume lectin domain
Lectin_legB PF00139 205 - 255 4.8e-11 Legume lectin domain
Pkinase PF00069 324 - 590 1.3e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 326 - 529 4.8e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 797, 1121
AccB1I GGYRCC 1 cut(s) 1238
AccI GTMKAC 1 cut(s) 306
AccII CGCG 1 cut(s) 891
AciI CCGC 4 cut(s) 505, 889, 1126, 1429
AclWI GGATC 6 cut(s) 488, 501, 523, 1418, 1431, 1817
AcsI RAATTY 1 cut(s) 1857
AcuI CTGAAG 2 cut(s) 91, 521
AfaI GTAC 7 cut(s) 133, 332, 1271, 1335, 1365, 1723, 1900
AfiI CCNNNNNNNGG 4 cut(s) 511, 963, 1434, 1754
AflIII ACRYGT 1 cut(s) 1521
AgsI TTSAA 5 cut(s) 418, 1384, 1496, 1672, 1778
AjnI CCWGG 3 cut(s) 607, 814, 1143
AleI CACNNNNGTG 1 cut(s) 299
AluBI AGCT 7 cut(s) 582, 1280, 1358, 1393, 1417, 1652, 1893
AluI AGCT 7 cut(s) 582, 1280, 1358, 1393, 1417, 1652, 1893
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 3 cut(s) 85, 901, 1443
AlwI GGATC 6 cut(s) 488, 501, 523, 1418, 1431, 1817
AlwNI CAGNNNCTG 2 cut(s) 815, 1052
AoxI GGCC 4 cut(s) 502, 988, 1290, 1476
ApeKI GCWGC 3 cut(s) 689, 1041, 1649
ApoI RAATTY 1 cut(s) 1857
Asp700I GAANNNNTTC 2 cut(s) 616, 1097
AspS9I GGNCC 2 cut(s) 502, 1477
AsuC2I CCSGG 2 cut(s) 501, 1481
AsuHPI GGTGA 6 cut(s) 170, 413, 1409, 1595, 1718, 1774
AsuNHI GCTAGC 1 cut(s) 913
AxyI CCTNAGG 1 cut(s) 324
BamHI GGATCC 2 cut(s) 493, 1423
BanI GGYRCC 1 cut(s) 1238
BbsI GAAGAC 3 cut(s) 527, 1090, 1574
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 3 cut(s) 676, 1028, 1661
BccI CCATC 4 cut(s) 131, 335, 391, 1143
BceAI ACGGC 1 cut(s) 446
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 3 cut(s) 609, 816, 1145
BciVI GTATCC 1 cut(s) 1463
BclI TGATCA 2 cut(s) 1078, 1678
BcnI CCSGG 2 cut(s) 501, 1481
BcoDI GTCTC 3 cut(s) 85, 901, 1443
BfaI CTAG 7 cut(s) 129, 563, 914, 986, 1506, 1643, 1890
BfmI CTRYAG 1 cut(s) 1894
BfuI GTATCC 1 cut(s) 1463
BisI GCNGC 5 cut(s) 505, 690, 1042, 1126, 1650
BlsI GCNGC 5 cut(s) 506, 691, 1043, 1127, 1651
BmcAI AGTACT 1 cut(s) 332
Bme1390I CCNGG 5 cut(s) 501, 609, 816, 1145, 1481
BmgT120I GGNCC 2 cut(s) 502, 1477
BmiI GGNNCC 4 cut(s) 495, 1240, 1425, 1479
BmrFI CCNGG 5 cut(s) 501, 609, 816, 1145, 1481
BmrI ACTGGG 2 cut(s) 273, 416
BmsI GCATC 3 cut(s) 151, 724, 1309
BmtI GCTAGC 1 cut(s) 917
BmuI ACTGGG 2 cut(s) 273, 416
BpiI GAAGAC 3 cut(s) 527, 1090, 1574
BpmI CTGGAG 1 cut(s) 348
Bpu10I CCTNAGC 1 cut(s) 1294
BpuEI CTTGAG 3 cut(s) 206, 926, 1453
BpuMI CCSGG 2 cut(s) 501, 1481
BsaAI YACGTR 1 cut(s) 228
BsaBI GATNNNNATC 1 cut(s) 520
BsaI GGTCTC 1 cut(s) 1443
BsaJI CCNNGG 4 cut(s) 991, 1033, 1479, 1545
BsaXI ACNNNNNCTCC 4 cut(s) 869, 899, 1492, 1522
Bsc4I CCNNNNNNNGG 4 cut(s) 511, 963, 1434, 1754
Bse1I ACTGG 4 cut(s) 268, 365, 411, 700
Bse21I CCTNAGG 1 cut(s) 324
Bse3DI GCAATG 3 cut(s) 804, 1262, 1790
Bse8I GATNNNNATC 1 cut(s) 520
BseBI CCWGG 3 cut(s) 609, 816, 1145
BseDI CCNNGG 4 cut(s) 991, 1033, 1479, 1545
BseGI GGATG 3 cut(s) 94, 383, 1378
BseJI GATNNNNATC 1 cut(s) 520
BseLI CCNNNNNNNGG 4 cut(s) 511, 963, 1434, 1754
BseMI GCAATG 3 cut(s) 804, 1262, 1790
BseMII CTCAG 2 cut(s) 1454, 1883
BseNI ACTGG 4 cut(s) 268, 365, 411, 700
BseXI GCAGC 3 cut(s) 676, 1028, 1661
BsgI GTGCAG 2 cut(s) 1027, 1169
Bsh1236I CGCG 1 cut(s) 891
Bsh1285I CGRYCG 1 cut(s) 678
BshFI GGCC 4 cut(s) 504, 990, 1292, 1478
BshNI GGYRCC 1 cut(s) 1238
BsiEI CGRYCG 1 cut(s) 678
BsiHKAI GWGCWC 1 cut(s) 591
BsiSI CCGG 3 cut(s) 500, 1481, 1796
BslFI GGGAC 3 cut(s) 266, 1017, 1474
BslI CCNNNNNNNGG 4 cut(s) 511, 963, 1434, 1754
BsmAI GTCTC 3 cut(s) 85, 901, 1443
BsmBI CGTCTC 1 cut(s) 85
BsmFI GGGAC 3 cut(s) 266, 1017, 1474
BsmI GAATGC 2 cut(s) 564, 1187
BsnI GGCC 4 cut(s) 504, 990, 1292, 1478
Bso31I GGTCTC 1 cut(s) 1443
Bsp1286I GDGCHC 1 cut(s) 591
BspACI CCGC 4 cut(s) 505, 889, 1126, 1429
BspANI GGCC 4 cut(s) 504, 990, 1292, 1478
BspCNI CTCAG 2 cut(s) 1453, 1882
BspFNI CGCG 1 cut(s) 891
BspHI TCATGA 1 cut(s) 1168
BspLI GGNNCC 4 cut(s) 495, 1240, 1425, 1479
BspOI GCTAGC 1 cut(s) 917
BspPI GGATC 6 cut(s) 488, 501, 523, 1418, 1431, 1817
BspT107I GGYRCC 1 cut(s) 1238
BspTNI GGTCTC 1 cut(s) 1443
BsrDI GCAATG 3 cut(s) 804, 1262, 1790
BsrI ACTGG 4 cut(s) 268, 365, 411, 700
BssECI CCNNGG 4 cut(s) 991, 1033, 1479, 1545
BssT1I CCWWGG 3 cut(s) 991, 1033, 1545
Bst2UI CCWGG 3 cut(s) 609, 816, 1145
Bst4CI ACNGT 3 cut(s) 601, 1048, 1583
Bst6I CTCTTC 1 cut(s) 1052
BstAPI GCANNNNNTGC 1 cut(s) 51
BstBAI YACGTR 1 cut(s) 228
BstC8I GCNNGC 2 cut(s) 30, 915
BstDEI CTNAG 5 cut(s) 324, 1294, 1389, 1440, 1869
BstF5I GGATG 3 cut(s) 94, 383, 1378
BstFNI CGCG 1 cut(s) 891
BstMAI GTCTC 3 cut(s) 85, 901, 1443
BstMCI CGRYCG 1 cut(s) 678
BstMWI GCNNNNNNNGC 3 cut(s) 18, 51, 230
BstNI CCWGG 3 cut(s) 609, 816, 1145
BstNSI RCATGY 3 cut(s) 224, 1525, 1816
BstSCI CCNGG 5 cut(s) 499, 607, 814, 1143, 1479
BstSFI CTRYAG 1 cut(s) 1894
BstSNI TACGTA 1 cut(s) 228
BstUI CGCG 1 cut(s) 891
BstV1I GCAGC 3 cut(s) 676, 1028, 1661
BstV2I GAAGAC 3 cut(s) 527, 1090, 1574
BstX2I RGATCY 2 cut(s) 493, 1423
BstXI CCANNNNNNTGG 2 cut(s) 1235, 1420
BstYI RGATCY 2 cut(s) 493, 1423
Bsu36I CCTNAGG 1 cut(s) 324
BsuI GTATCC 1 cut(s) 1463
BsuRI GGCC 4 cut(s) 504, 990, 1292, 1478
BtsCI GGATG 3 cut(s) 94, 383, 1378
BtsI GCAGTG 2 cut(s) 255, 1334
BtsIMutI CAGTG 2 cut(s) 255, 1334
Cac8I GCNNGC 2 cut(s) 30, 915
CaiI CAGNNNCTG 2 cut(s) 815, 1052
CciI TCATGA 1 cut(s) 1168
Cfr13I GGNCC 2 cut(s) 502, 1477
CseI GACGC 1 cut(s) 1655
CsiI ACCWGGT 1 cut(s) 1143
Csp6I GTAC 7 cut(s) 132, 331, 1270, 1334, 1364, 1722, 1899
CspCI CAANNNNNGTGG 2 cut(s) 1434, 1469
CviQI GTAC 7 cut(s) 132, 331, 1270, 1334, 1364, 1722, 1899
DdeI CTNAG 5 cut(s) 324, 1294, 1389, 1440, 1869
Eam1104I CTCTTC 1 cut(s) 1052
EarI CTCTTC 1 cut(s) 1052
Eco105I TACGTA 1 cut(s) 228
Eco130I CCWWGG 3 cut(s) 991, 1033, 1545
Eco31I GGTCTC 1 cut(s) 1443
Eco32I GATATC 2 cut(s) 1348, 1875
Eco57I CTGAAG 2 cut(s) 91, 521
Eco81I CCTNAGG 1 cut(s) 324
EcoRII CCWGG 3 cut(s) 607, 814, 1143
EcoRV GATATC 2 cut(s) 1348, 1875
EcoT14I CCWWGG 3 cut(s) 991, 1033, 1545
EcoT22I ATGCAT 2 cut(s) 1201, 1818
ErhI CCWWGG 3 cut(s) 991, 1033, 1545
Esp3I CGTCTC 1 cut(s) 85
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 1555, 1587
FaqI GGGAC 3 cut(s) 266, 1017, 1474
FauI CCCGC 2 cut(s) 896, 1436
FauNDI CATATG 1 cut(s) 845
FbaI TGATCA 2 cut(s) 1078, 1678
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 5 cut(s) 505, 690, 1042, 1126, 1650
FokI GGATG 3 cut(s) 81, 370, 1385
Fsp4HI GCNGC 5 cut(s) 505, 690, 1042, 1126, 1650
FspBI CTAG 7 cut(s) 129, 563, 914, 986, 1506, 1643, 1890
GluI GCNGC 5 cut(s) 505, 690, 1042, 1126, 1650
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 4 cut(s) 504, 990, 1292, 1478
HapII CCGG 3 cut(s) 500, 1481, 1796
HgaI GACGC 1 cut(s) 1655
HincII GTYRAC 2 cut(s) 307, 643
HindII GTYRAC 2 cut(s) 307, 643
HindIII AAGCTT 3 cut(s) 580, 1391, 1415
HinfI GANTC 3 cut(s) 1020, 1062, 1514
HpaII CCGG 3 cut(s) 500, 1481, 1796
HphI GGTGA 6 cut(s) 170, 413, 1409, 1595, 1718, 1774
Hpy166II GTNNAC 5 cut(s) 307, 404, 643, 1334, 1722
Hpy188I TCNGA 7 cut(s) 7, 218, 901, 1078, 1443, 1519, 1872
Hpy188III TCNNGA 8 cut(s) 177, 662, 873, 905, 1002, 1169, 1643, 1826
Hpy8I GTNNAC 5 cut(s) 307, 404, 643, 1334, 1722
HpyAV CCTTC 6 cut(s) 149, 975, 1310, 1490, 1557, 1762
HpyCH4III ACNGT 3 cut(s) 601, 1048, 1583
HpyCH4IV ACGT 2 cut(s) 227, 1362
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 51, 230
HpyF3I CTNAG 5 cut(s) 324, 1294, 1389, 1440, 1869
HpySE526I ACGT 2 cut(s) 227, 1362
Ksp22I TGATCA 2 cut(s) 1078, 1678
LmnI GCTCC 2 cut(s) 367, 586
Lsp1109I GCAGC 3 cut(s) 676, 1028, 1661
LweI GCATC 3 cut(s) 151, 724, 1309
MabI ACCWGGT 1 cut(s) 1143
MaeI CTAG 7 cut(s) 129, 563, 914, 986, 1506, 1643, 1890
MaeII ACGT 2 cut(s) 227, 1362
MaeIII GTNAC 2 cut(s) 565, 670
MflI RGATCY 2 cut(s) 493, 1423
MhlI GDGCHC 1 cut(s) 591
MlyI GAGTC 1 cut(s) 1014
MmeI TCCRAC 3 cut(s) 196, 411, 1690
Mph1103I ATGCAT 2 cut(s) 1201, 1818
MroXI GAANNNNTTC 2 cut(s) 616, 1097
MseI TTAA 4 cut(s) 147, 335, 738, 1130
MslI CAYNNNNRTG 2 cut(s) 299, 1317
MspA1I CMGCKG 1 cut(s) 1652
MspI CCGG 3 cut(s) 500, 1481, 1796
MspR9I CCNGG 5 cut(s) 501, 609, 816, 1145, 1481
Mva1269I GAATGC 2 cut(s) 564, 1187
MvaI CCWGG 3 cut(s) 609, 816, 1145
MvnI CGCG 1 cut(s) 891
MwoI GCNNNNNNNGC 3 cut(s) 18, 51, 230
NciI CCSGG 2 cut(s) 501, 1481
NdeI CATATG 1 cut(s) 845
NheI GCTAGC 1 cut(s) 913
NlaIV GGNNCC 4 cut(s) 495, 1240, 1425, 1479
NmeAIII GCCGAG 1 cut(s) 691
NsiI ATGCAT 2 cut(s) 1201, 1818
NspI RCATGY 3 cut(s) 224, 1525, 1816
OliI CACNNNNGTG 1 cut(s) 299
PagI TCATGA 1 cut(s) 1168
PciI ACATGT 1 cut(s) 1521
PctI GAATGC 2 cut(s) 564, 1187
PdmI GAANNNNTTC 2 cut(s) 616, 1097
PfeI GAWTC 2 cut(s) 1062, 1514
PfoI TCCNGGA 1 cut(s) 607
PkrI GCNGC 5 cut(s) 506, 691, 1043, 1127, 1651
Ple19I CGATCG 1 cut(s) 678
PleI GAGTC 1 cut(s) 1014
PpsI GAGTC 1 cut(s) 1014
Ppu21I YACGTR 1 cut(s) 228
PscI ACATGT 1 cut(s) 1521
PsiI TTATAA 2 cut(s) 797, 1121
Psp6I CCWGG 3 cut(s) 607, 814, 1143
PspGI CCWGG 3 cut(s) 607, 814, 1143
PspN4I GGNNCC 4 cut(s) 495, 1240, 1425, 1479
PspPI GGNCC 2 cut(s) 502, 1477
PstNI CAGNNNCTG 2 cut(s) 815, 1052
PsuI RGATCY 2 cut(s) 493, 1423
PvuI CGATCG 1 cut(s) 678
PvuII CAGCTG 1 cut(s) 1652
RsaI GTAC 7 cut(s) 133, 332, 1271, 1335, 1365, 1723, 1900
RsaNI GTAC 7 cut(s) 132, 331, 1270, 1334, 1364, 1722, 1899
RseI CAYNNNNRTG 2 cut(s) 299, 1317
SalI GTCGAC 1 cut(s) 305
SaqAI TTAA 4 cut(s) 147, 335, 738, 1130
SatI GCNGC 5 cut(s) 505, 690, 1042, 1126, 1650
Sau96I GGNCC 2 cut(s) 502, 1477
ScaI AGTACT 1 cut(s) 332
SchI GAGTC 1 cut(s) 1014
ScrFI CCNGG 5 cut(s) 501, 609, 816, 1145, 1481
SduI GDGCHC 1 cut(s) 591
SexAI ACCWGGT 1 cut(s) 1143
SfaNI GCATC 3 cut(s) 151, 724, 1309
SfcI CTRYAG 1 cut(s) 1894
SmiMI CAYNNNNRTG 2 cut(s) 299, 1317
SmlI CTYRAG 3 cut(s) 185, 905, 1432
SmoI CTYRAG 3 cut(s) 185, 905, 1432
SnaBI TACGTA 1 cut(s) 228
SsiI CCGC 4 cut(s) 505, 889, 1126, 1429
SspI AATATT 3 cut(s) 49, 786, 1639
SspMI CTAG 7 cut(s) 129, 563, 914, 986, 1506, 1643, 1890
StyD4I CCNGG 5 cut(s) 499, 607, 814, 1143, 1479
StyI CCWWGG 3 cut(s) 991, 1033, 1545
TaaI ACNGT 3 cut(s) 601, 1048, 1583
TaiI ACGT 2 cut(s) 230, 1365
TaqI TCGA 6 cut(s) 123, 306, 471, 743, 872, 1138
TatI WGTACW 4 cut(s) 131, 330, 1333, 1721
TauI GCSGC 2 cut(s) 507, 1128
TfiI GAWTC 2 cut(s) 1062, 1514
Tru1I TTAA 4 cut(s) 147, 335, 738, 1130
Tru9I TTAA 4 cut(s) 147, 335, 738, 1130
TscAI CASTG 2 cut(s) 262, 1334
TseI GCWGC 3 cut(s) 689, 1041, 1649
TspRI CASTG 2 cut(s) 262, 1334
XapI RAATTY 1 cut(s) 1857
XbaI TCTAGA 1 cut(s) 1642
XceI RCATGY 3 cut(s) 224, 1525, 1816
XcmI CCANNNNNNNNNTGG 1 cut(s) 1605
XmiI GTMKAC 1 cut(s) 306
XmnI GAANNNNTTC 2 cut(s) 616, 1097
XspI CTAG 7 cut(s) 129, 563, 914, 986, 1506, 1643, 1890
ZrmI AGTACT 1 cut(s) 332
Zsp2I ATGCAT 2 cut(s) 1201, 1818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.